HO054802
EST Overview
Libraries
Unigenes
This EST is part of the following unigenes:
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of HO054802 vs. DB:swissprot:display
Match: LIVF_SALTY (High-affinity branched-chain amino acid transport ATP-binding protein livF OS=Salmonella typhimurium GN=livF PE=3 SV=1) HSP 1 Score: 52.373 bits (124), Expect = 8.744e-7 Identity = 24/39 (61.54%), Postives = 30/39 (76.92%), Query Frame = -1 Query: 3 YGGIKAVKGISLEVNDGELVTLIGANGAGKTTTLKAITG 119 YG I+A+ +SL +N GE+VTLIGANGAGKTT L + G Sbjct: 15 YGKIQALHDVSLHINQGEIVTLIGANGAGKTTLLGTLCG 53
BLAST of HO054802 vs. DB:swissprot:display
Match: LIVF_SALTI (High-affinity branched-chain amino acid transport ATP-binding protein livF OS=Salmonella typhi GN=livF PE=3 SV=1) HSP 1 Score: 52.373 bits (124), Expect = 8.744e-7 Identity = 24/39 (61.54%), Postives = 30/39 (76.92%), Query Frame = -1 Query: 3 YGGIKAVKGISLEVNDGELVTLIGANGAGKTTTLKAITG 119 YG I+A+ +SL +N GE+VTLIGANGAGKTT L + G Sbjct: 15 YGKIQALHDVSLHINQGEIVTLIGANGAGKTTLLGTLCG 53
BLAST of HO054802 vs. TrEMBL
Match: B0LFS3|B0LFS3_9BACT (ABC transporter OS=uncultured bacterium pEAF66 PE=4 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 4.377e-12 Identity = 37/39 (94.87%), Postives = 37/39 (94.87%), Query Frame = -1 Query: 3 YGGIKAVKGISLEVNDGELVTLIGANGAGKTTTLKAITG 119 YGGIKAVKGI LEVN GELVTLIGANGAGKTTTLKAITG Sbjct: 15 YGGIKAVKGIDLEVNKGELVTLIGANGAGKTTTLKAITG 53
BLAST of HO054802 vs. TrEMBL
Match: Q0K7C0|Q0K7C0_RALEH (ABC-type transporter, ATPase component: HAAT family OS=Ralstonia eutropha (strain ATCC 17699 / H16 / DSM 428 / Stanier 337) GN=livF2 PE=4 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 2.172e-11 Identity = 34/39 (87.18%), Postives = 37/39 (94.87%), Query Frame = -1 Query: 3 YGGIKAVKGISLEVNDGELVTLIGANGAGKTTTLKAITG 119 YGGI+AVKGI LE+ DGELVTLIGANGAGKTTT+KAITG Sbjct: 15 YGGIQAVKGIDLEIRDGELVTLIGANGAGKTTTMKAITG 53
BLAST of HO054802 vs. TrEMBL
Match: B3R692|B3R692_CUPTR (High-affinity branched-chain amino acid transport protein, ABC superfamily, atp_binding component OS=Cupriavidus taiwanensis (strain R1 / LMG 19424) GN=livF2 PE=4 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 2.172e-11 Identity = 34/39 (87.18%), Postives = 37/39 (94.87%), Query Frame = -1 Query: 3 YGGIKAVKGISLEVNDGELVTLIGANGAGKTTTLKAITG 119 YGGI+AVKGI LE+ DGELVTLIGANGAGKTTT+KAITG Sbjct: 20 YGGIQAVKGIDLEIRDGELVTLIGANGAGKTTTMKAITG 58
BLAST of HO054802 vs. TrEMBL
Match: Q46XP7|Q46XP7_RALEJ (ABC transporter related OS=Ralstonia eutropha (strain JMP134) GN=Reut_A2725 PE=4 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 2.837e-11 Identity = 33/39 (84.62%), Postives = 37/39 (94.87%), Query Frame = -1 Query: 3 YGGIKAVKGISLEVNDGELVTLIGANGAGKTTTLKAITG 119 YGGI+AVKG+ LE+ DGELVTLIGANGAGKTTT+KAITG Sbjct: 15 YGGIQAVKGVDLEIKDGELVTLIGANGAGKTTTMKAITG 53
BLAST of HO054802 vs. TrEMBL
Match: B5SHI8|B5SHI8_RALSO (Amino acid atp-binding protein OS=Ralstonia solanacearum IPO1609 GN=RSIPO_00777 PE=4 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 2.837e-11 Identity = 33/39 (84.62%), Postives = 37/39 (94.87%), Query Frame = -1 Query: 3 YGGIKAVKGISLEVNDGELVTLIGANGAGKTTTLKAITG 119 YGGI+AVKG+ LE+ DGELVTLIGANGAGKTTT+KAITG Sbjct: 15 YGGIQAVKGVDLEITDGELVTLIGANGAGKTTTMKAITG 53
BLAST of HO054802 vs. TrEMBL
Match: B5RVD3|B5RVD3_RALSO (Amino acid atp-binding protein OS=Ralstonia solanacearum GN=RSMK00968 PE=4 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 2.837e-11 Identity = 33/39 (84.62%), Postives = 37/39 (94.87%), Query Frame = -1 Query: 3 YGGIKAVKGISLEVNDGELVTLIGANGAGKTTTLKAITG 119 YGGI+AVKG+ LE+ DGELVTLIGANGAGKTTT+KAITG Sbjct: 15 YGGIQAVKGVDLEITDGELVTLIGANGAGKTTTMKAITG 53
BLAST of HO054802 vs. TrEMBL
Match: A3RRR2|A3RRR2_RALSO (LivF OS=Ralstonia solanacearum UW551 GN=livF PE=4 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 2.837e-11 Identity = 33/39 (84.62%), Postives = 37/39 (94.87%), Query Frame = -1 Query: 3 YGGIKAVKGISLEVNDGELVTLIGANGAGKTTTLKAITG 119 YGGI+AVKG+ LE+ DGELVTLIGANGAGKTTT+KAITG Sbjct: 15 YGGIQAVKGVDLEITDGELVTLIGANGAGKTTTMKAITG 53
BLAST of HO054802 vs. TrEMBL
Match: Q8XWN6|Q8XWN6_RALSO (Probable amino acid atp-binding abc transporter protein OS=Ralstonia solanacearum GN=RSc2437 PE=4 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 4.839e-11 Identity = 33/39 (84.62%), Postives = 37/39 (94.87%), Query Frame = -1 Query: 3 YGGIKAVKGISLEVNDGELVTLIGANGAGKTTTLKAITG 119 YGGI+AVKG+ LE+ DGELVTLIGANGAGKTTT+KAITG Sbjct: 21 YGGIQAVKGVDLEIADGELVTLIGANGAGKTTTMKAITG 59
BLAST of HO054802 vs. TrEMBL
Match: Q1LJE0|Q1LJE0_RALME (Leucine/isoleucine/valine transporter subunit, ATP-binding component of ABC superfamily OS=Ralstonia metallidurans (strain CH34 / ATCC 43123 / DSM 2839) GN=livF2 PE=4 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 6.320e-11 Identity = 32/39 (82.05%), Postives = 37/39 (94.87%), Query Frame = -1 Query: 3 YGGIKAVKGISLEVNDGELVTLIGANGAGKTTTLKAITG 119 YGGI+AVKG+ L++ DGELVTLIGANGAGKTTT+KAITG Sbjct: 15 YGGIQAVKGVDLDIKDGELVTLIGANGAGKTTTMKAITG 53
BLAST of HO054802 vs. TrEMBL
Match: A2SEU8|A2SEU8_METPP (Putative amino acid ATP-binding ABC transporter protein OS=Methylibium petroleiphilum (strain PM1) GN=Mpe_A1126 PE=4 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 6.320e-11 Identity = 34/39 (87.18%), Postives = 37/39 (94.87%), Query Frame = -1 Query: 3 YGGIKAVKGISLEVNDGELVTLIGANGAGKTTTLKAITG 119 YGGI+AVKG+SLEV GELV+LIGANGAGKTTTLKAITG Sbjct: 15 YGGIQAVKGVSLEVRQGELVSLIGANGAGKTTTLKAITG 53 The following BLAST results are available for this feature:
BLAST of HO054802 vs. DB:swissprot:display
Analysis Date: 2011-01-18 (BLAST: Vaccinium corymbosum unigene v1 vs Swissprot) Total hits: 2
BLAST of HO054802 vs. TrEMBL
Analysis Date: 2011-01-18 (BLAST: Vaccinium corymbosum unigene v1 vs TrEMBL) Total hits: 10
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >HO054802 ID=HO054802; Name=HO054802; organism=Vaccinium corymbosum; type=EST; length=119bpback to top |