DW043090

EST Overview
NameDW043090
Unique NameDW043090
TypeEST
OrganismVaccinium corymbosum (northern highbush blueberry)
Sequence length534
Libraries
Library NameType
LIBEST_018810 Subtracted cDNA library of Vaccinium corymbosumcdna_library
Unigenes
This EST is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Vaccinium corymbosum unigene v1EST
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
Vaccinium corymbosum unigene v12011-01-18
BLAST: Vaccinium corymbosum unigene v1 vs TrEMBL2011-01-18
InterProScan analysis for Vaccinium corymbosum unigene v12011-01-18
Homology
BLAST of DW043090 vs. TrEMBL
Match: B2BJD1|B2BJD1_RHOCT (Early light-induced protein 2 OS=Rhododendron catawbiense PE=2 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 2.359e-15
Identity = 53/112 (47.32%), Postives = 67/112 (59.82%), Query Frame = 1
Query:  160 SILVSPATGVAKPARVVGLKPMTP-CCYMXXXXXXXXXXVRCMAKDGQNKEVETPVTTS-QKVKVDSNDFYVVSSFSRPAQEIISRILPIICLVATIAVELYDGDDFFTKIS 489
            SILVSP TGVAK A   GL    P  CY+          VRCMAKDG+ +EVE+P+  +  KVK D   F+ + +FS P  E I+  L ++  VA IAVELY G+D F +IS
Sbjct:    9 SILVSPVTGVAKGA---GLNRTIPRSCYLPRQGRNSGMLVRCMAKDGRKEEVESPIEANVAKVKTD---FFDLLAFSGPGPERINGRLAMVGFVAAIAVELYKGEDVFAQIS 114          

HSP 2 Score: 24.2534 bits (51), Expect = 2.359e-15
Identity = 9/12 (75.00%), Postives = 10/12 (83.33%), Query Frame = 3
Query:  492 GSIPWFLPTSGV 527
            G IPWFL T+GV
Sbjct:  116 GGIPWFLLTTGV 127          
BLAST of DW043090 vs. TrEMBL
Match: B2BJD0|B2BJD0_RHOCT (Early light-induced protein 1 OS=Rhododendron catawbiense PE=2 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 5.181e-15
Identity = 51/111 (45.95%), Postives = 65/111 (58.56%), Query Frame = 1
Query:  160 SILVSPATGVAKPARVVGLKPMTP-CCYMXXXXXXXXXXVRCMAKDGQNKEVETPVTTSQKVKVDSNDFYVVSSFSRPAQEIISRILPIICLVATIAVELYDGDDFFTKIS 489
            SILVSP TGVAK A   GL    P  CY+          VRCMAKDG+ +EVE+P+  +  V     DF+ + +FS P  E I+  L ++  VA IAVELY G+D F +IS
Sbjct:    9 SILVSPVTGVAKGA---GLSRTIPRSCYLPRQGRNSGMLVRCMAKDGRKEEVESPIEAN--VAKVRTDFFDLLAFSGPGPERINGRLAMVGFVAAIAVELYKGEDVFAQIS 114          

HSP 2 Score: 24.2534 bits (51), Expect = 5.181e-15
Identity = 9/12 (75.00%), Postives = 10/12 (83.33%), Query Frame = 3
Query:  492 GSIPWFLPTSGV 527
            G IPWFL T+GV
Sbjct:  116 GGIPWFLLTTGV 127          
BLAST of DW043090 vs. TrEMBL
Match: B2BJD2|B2BJD2_RHOCT (Early light-induced protein 3 OS=Rhododendron catawbiense PE=2 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 3.430e-13
Identity = 51/112 (45.54%), Postives = 65/112 (58.04%), Query Frame = 1
Query:  160 SILVSPATGVAKPARVVGLKPMTP-CCYMXXXXXXXXXXVRCMAKDGQNKEVETPV-TTSQKVKVDSNDFYVVSSFSRPAQEIISRILPIICLVATIAVELYDGDDFFTKIS 489
            SILVSP TGVAK A   GL    P   Y+          VRCMAKDG+ +EVE+PV  T  K ++D   F+ + +FS P  E I+  L ++  VA IAVEL  G+D F +IS
Sbjct:    9 SILVSPVTGVAKGA---GLSRTIPRSSYLPRQGRDSGMLVRCMAKDGKKEEVESPVKATVAKARID---FFDLLAFSGPGPERINGRLAMVGFVAAIAVELSKGEDVFAQIS 114          

HSP 2 Score: 24.2534 bits (51), Expect = 3.430e-13
Identity = 9/12 (75.00%), Postives = 10/12 (83.33%), Query Frame = 3
Query:  492 GSIPWFLPTSGV 527
            G IPWFL T+GV
Sbjct:  116 GGIPWFLLTTGV 127          
BLAST of DW043090 vs. TrEMBL
Match: B2BJD5|B2BJD5_RHOCT (Early light-induced protein 6 OS=Rhododendron catawbiense PE=2 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 1.029e-11
Identity = 50/113 (44.25%), Postives = 63/113 (55.75%), Query Frame = 1
Query:  160 SILVSPATGVAKPARVVGLKPMT---PCCYMXXXXXXXXXXVRCMAKDGQNKEVETPVTTSQKVKVDSNDFYVVSSFSRPAQEIISRILPIICLVATIAVELYDGDDFFTKIS 489
            SI+VSPATGVA   +  GL   T     CY+          VRCMAK GQ +EV T    S K KV + DF+ + +FS P  E I+  L ++  VA IAVEL  G+D F +IS
Sbjct:    9 SIMVSPATGVA--TKGTGLSRSTIPRSSCYLPRQGRNSGALVRCMAKGGQKEEVGT----SPKAKVRT-DFFNLLAFSGPGPERINGRLAMVGFVAAIAVELSKGEDVFAQIS 114          

HSP 2 Score: 24.2534 bits (51), Expect = 1.029e-11
Identity = 9/12 (75.00%), Postives = 10/12 (83.33%), Query Frame = 3
Query:  492 GSIPWFLPTSGV 527
            G IPWFL T+GV
Sbjct:  116 GGIPWFLLTTGV 127          
BLAST of DW043090 vs. TrEMBL
Match: B2BJD4|B2BJD4_RHOCT (Early light-induced protein 5 OS=Rhododendron catawbiense PE=2 SV=1)

HSP 1 Score: 67.0106 bits (162), Expect = 4.950e-11
Identity = 46/110 (41.82%), Postives = 59/110 (53.64%), Query Frame = 1
Query:  160 SILVSPATGVAKPARVVGLKPMTPCCYMXXXXXXXXXXVRCMAKDGQNKEVETPVTTSQKVKVDSNDFYVVSSFSRPAQEIISRILPIICLVATIAVELYDGDDFFTKIS 489
            SI+VSP TGVAK   +    P + CCY+          VRCMAK GQ +E  +P     K KV     + + +F  PA E I+  L +I  VA IAVEL  G+D F +IS
Sbjct:    9 SIMVSPVTGVAKGTGLSRTIPRS-CCYLPRQGRNSGMLVRCMAKGGQKEEAGSP----PKAKV----LFDLLAFKGPAPERINGRLAMIGFVAAIAVELSKGEDVFAQIS 109          

HSP 2 Score: 24.2534 bits (51), Expect = 4.950e-11
Identity = 9/12 (75.00%), Postives = 10/12 (83.33%), Query Frame = 3
Query:  492 GSIPWFLPTSGV 527
            G IPWFL T+GV
Sbjct:  111 GGIPWFLLTTGV 122          
BLAST of DW043090 vs. TrEMBL
Match: B2CZY6|B2CZY6_CAMSI (Putative cold-inducible protein OS=Camellia sinensis GN=ELIP1 PE=2 SV=1)

HSP 1 Score: 66.6254 bits (161), Expect = 1.102e-9
Identity = 48/119 (40.34%), Postives = 59/119 (49.58%), Query Frame = 1
Query:  160 SILVSPATGVAKPARVVGLKPMTPCCYMXXXXXXXXXXVRCMAKDGQNKEVE---TPVTTSQKVKVD------SNDFYVVSSFSRPAQEIISRILPIICLVATIAVELYDGDDFFTKIS 489
            SIL  P +GV   AR       TPC Y+          VRCMA+D QNK+V    TP  TSQ +         S  F  V +FS PA E I+  L +I  VA +AVEL  G+D   +IS
Sbjct:    8 SILARPVSGVTARAR---FSQFTPCSYVPRLQRNAGMQVRCMAEDDQNKDVTPITTPPPTSQPISFPPPKPKVSTKFSDVLAFSGPAPERINGRLAMIGFVAAMAVELSKGEDVLAQIS 123          
BLAST of DW043090 vs. TrEMBL
Match: C9E439|C9E439_CAMSI (Putative early light induced protein 2 OS=Camellia sinensis GN=ELIP2 PE=2 SV=1)

HSP 1 Score: 61.6178 bits (148), Expect = 3.544e-8
Identity = 45/110 (40.91%), Postives = 57/110 (51.82%), Query Frame = 1
Query:  160 SILVSPATGVAKPARVVGLKPMTPCCYMXXXXXXXXXXVRCMAKDGQNKEVETPVTTSQKVKVDSNDFYVVSSFSRPAQEIISRILPIICLVATIAVELYDGDDFFTKIS 489
            S+L  P T V   AR       TPC Y+          VRCMAK GQ ++V      +QK KV S  F  V +FS PA E I+  L +I  VA +AVEL +G+D   +IS
Sbjct:    9 SVLARPVTSVTTRAR---FGQFTPCSYVPYLQKNASMQVRCMAKYGQKEDV------TQKPKV-STKFSDVLAFSGPAPERINGRLAMIGFVAAMAVELSNGEDVLVQIS 108          
BLAST of DW043090 vs. TrEMBL
Match: B2BJD6|B2BJD6_RHOCT (Early light-induced protein 7 OS=Rhododendron catawbiense PE=2 SV=1)

HSP 1 Score: 58.151 bits (139), Expect = 4.332e-8
Identity = 48/121 (39.67%), Postives = 61/121 (50.41%), Query Frame = 1
Query:  160 SILVSPATGVAKPARVVGLKPMTPCCYMXXXXXXXXXXVRCMAKDGQNKEV---ETPVTTSQ--------KVKVDSNDFYVVSSFSRPAQEIISRILPIICLVATIAVELYDGDDFFTKIS 489
            SILVSP  GVAK      L+P     +M          VRC A++GQ ++     TP T S         K K  S DF+ V +FS PA E I+  L +I  VA IAVEL  G+D F +I+
Sbjct:    9 SILVSPVAGVAKGLGSNRLRPAYR--HMPHQRRSSSVVVRCTAENGQKEQAVPAATPSTPSPLPIPPPPPKAKA-STDFFDVFAFSGPAPERINGRLAMIGFVAAIAVELSKGEDVFAQIA 126          

HSP 2 Score: 23.0978 bits (48), Expect = 4.332e-8
Identity = 8/12 (66.67%), Postives = 10/12 (83.33%), Query Frame = 3
Query:  492 GSIPWFLPTSGV 527
            G IPWF+ T+GV
Sbjct:  128 GGIPWFVLTTGV 139          
BLAST of DW043090 vs. TrEMBL
Match: B2BJD3|B2BJD3_RHOCT (Early light-induced protein 4 OS=Rhododendron catawbiense PE=2 SV=1)

HSP 1 Score: 55.4546 bits (132), Expect = 1.246e-7
Identity = 42/110 (38.18%), Postives = 52/110 (47.27%), Query Frame = 1
Query:  160 SILVSPATGVAKPARVVGLKPMTPCCYMXXXXXXXXXXVRCMAKDGQNKEVETPVTTSQKVKVDSNDFYVVSSFSRPAQEIISRILPIICLVATIAVELYDGDDFFTKIS 489
            SILVSP TGVAK A +    P T  CY+          VRCMAK                      DF+ + +FS P  E I+  L ++  VA IAVEL  G+D F +IS
Sbjct:    9 SILVSPVTGVAKGAGLSRTIPRT--CYLPRQGRNSGMLVRCMAKA-------------------RIDFFDLLAFSGPGPERINGRLAMVGFVAAIAVELSKGEDVFAQIS 97          

HSP 2 Score: 24.2534 bits (51), Expect = 1.246e-7
Identity = 9/12 (75.00%), Postives = 10/12 (83.33%), Query Frame = 3
Query:  492 GSIPWFLPTSGV 527
            G IPWFL T+GV
Sbjct:   99 GGIPWFLLTTGV 110          
The following BLAST results are available for this feature:
BLAST of DW043090 vs. TrEMBL
Analysis Date: 2011-01-18 (BLAST: Vaccinium corymbosum unigene v1 vs TrEMBL)
Total hits: 9
Match NameE-valueIdentityDescription
B2BJD1|B2BJD1_RHOCT2.359e-1547.32Early light-induced protein 2 OS=Rhododendron cata... [more]
B2BJD0|B2BJD0_RHOCT5.181e-1545.95Early light-induced protein 1 OS=Rhododendron cata... [more]
B2BJD2|B2BJD2_RHOCT3.430e-1345.54Early light-induced protein 3 OS=Rhododendron cata... [more]
B2BJD5|B2BJD5_RHOCT1.029e-1144.25Early light-induced protein 6 OS=Rhododendron cata... [more]
B2BJD4|B2BJD4_RHOCT4.950e-1141.82Early light-induced protein 5 OS=Rhododendron cata... [more]
B2CZY6|B2CZY6_CAMSI1.102e-940.34Putative cold-inducible protein OS=Camellia sinens... [more]
C9E439|C9E439_CAMSI3.544e-840.91Putative early light induced protein 2 OS=Camellia... [more]
B2BJD6|B2BJD6_RHOCT4.332e-839.67Early light-induced protein 7 OS=Rhododendron cata... [more]
B2BJD3|B2BJD3_RHOCT1.246e-738.18Early light-induced protein 4 OS=Rhododendron cata... [more]
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InterPro
Analysis Name: InterProScan analysis for Vaccinium corymbosum unigene v1
Date Performed: 2011-01-18
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSEGsegsegcoord: 31..40
score

Properties
Property NameValue
Singlet in analysisVaccinium corymbosum unigene v1
Sequences
The following sequences are available for this feature:

EST sequence

>DW043090 ID=DW043090; Name=DW043090; organism=Vaccinium corymbosum; type=EST; length=534bp
TCGAGCGGCCGCCCGGGCAGGTACGCGGGGATAACTCATACTTAATAACT
TACAGCCCTGAAGTGTGAAGTATCTACATAGCCATAGCCATAACACTAGA
ACCCTGTAACTCAATCCCTAGCTTATACTCTCCAATGGCCGCCACATCAG
TAATGCACGTCCATTCTAGTGAGCCCGGCGACAGGTGTCGCCAAGCCGGC
GCGCGTTGTGGGATTGAAACCGATGACTCCTTGCTGCTATATGCCCCGTC
AGCAGAGGAGCTCTAGCCGGCCAGTGCGGTGCATGGCCAAGGATGGACAG
AATAAGGAAGTAGAAACTCCCGTCACGACGTCCCAAAAAGTTAAGGTCGA
CAGCAATGATTTCTACGTCGTGTCCTCGTTCAGTCGGCCAGCGCAGGAAA
TAATCAGCAGAATACTACCCATCATCTGCTTGGTGGCAACAATAGCCGTG
GAACTATACGATGGTGATGATTTCTTTACTAAAATCTCACCGGTAGCATC
CCGTGGTTTCTGCCAACTTCTGGTGTGCCCCTTC
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Annotated Terms
The following terms have been associated with this EST:
Vocabulary: INTERPRO
TermDefinition
noIPRunintegrated