CF810493

EST Overview
NameCF810493
Unique NameCF810493
TypeEST
OrganismVaccinium corymbosum (northern highbush blueberry)
Sequence length588
Libraries
Library NameType
LIBEST_014530 cDNA cold acclimated Bluecrop librarycdna_library
Unigenes
This EST is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Vaccinium corymbosum unigene v1EST
Homology
[Close]
BLAST of CF810493 vs. P. persica 1.0 peptide
Match: ppa009372m ()

HSP 1 Score: 60.077 bits (144), Expect = 8.281e-10
Identity = 31/65 (47.69%), Postives = 40/65 (61.54%), Query Frame = 3 
Query:  399 FQGRSYLLQ---GIPKKGNTRISFPSPLYALMTTGLIGKAQKWWEKGLQPNMKEIEGAGDLVESL 584
            F G+ + LQ    +P +GN +    S + +L T    GKA KWWEKG QPNMKE+  A DLV+SL
Sbjct:   60 FHGKGFALQEHRAMPSRGNFQSQAASVVNSLQTGLRFGKALKWWEKGNQPNMKEVTSAQDLVDSL 124
[Close]
BLAST of CF810493 vs. P. persica 1.0 peptide
Match: ppa009412m ()

HSP 1 Score: 57.3806 bits (137), Expect = 5.368e-9
Identity = 33/66 (50.00%), Postives = 42/66 (63.64%), Query Frame = 3 
Query:  399 FQGRSYLLQ---GIPKKGNTRISFPSPLYALMTTGL-IGKAQKWWEKGLQPNMKEIEGAGDLVESL 584
            F G+ + LQ    +P +GN +    S + +L  TGL  GKA KWWEKG QPNMKE+  A DLV+SL
Sbjct:   60 FHGKGFALQEHRAMPSRGNFQSQAASVVNSL--TGLRFGKALKWWEKGNQPNMKEVTSAQDLVDSL 123
[Close]
BLAST of CF810493 vs. TrEMBL
Match: D7TI43|D7TI43_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_7.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00033376001 PE=4 SV=1)

HSP 1 Score: 60.8474 bits (146), Expect = 7.778e-8
Identity = 37/66 (56.06%), Postives = 42/66 (63.64%), Query Frame = 3 
Query:  399 FQGRSYLLQGI---PKKGNTRISFPSPLYALMTTGLIGKAQKWWEKGLQPNMKEIEGAGDLVESLL 587
            F G   +LQ I   PK+ N + S       LM    IGKAQKWWEKGLQPNMKE+ GA DLV+SLL
Sbjct:   67 FHGGRIVLQEIGSMPKRRNAQASC-----TLMGLA-IGKAQKWWEKGLQPNMKEVTGAQDLVDSLL 126
[Close]
BLAST of CF810493 vs. TrEMBL
Match: A5AQX7|A5AQX7_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_007145 PE=4 SV=1)

HSP 1 Score: 60.8474 bits (146), Expect = 7.778e-8
Identity = 37/66 (56.06%), Postives = 42/66 (63.64%), Query Frame = 3 
Query:  399 FQGRSYLLQGI---PKKGNTRISFPSPLYALMTTGLIGKAQKWWEKGLQPNMKEIEGAGDLVESLL 587
            F G   +LQ I   PK+ N + S       LM    IGKAQKWWEKGLQPNMKE+ GA DLV+SLL
Sbjct:   69 FHGGRIVLQEIGSMPKRRNAQASC-----TLMGLA-IGKAQKWWEKGLQPNMKEVTGAQDLVDSLL 128
[Close]
BLAST of CF810493 vs. Vitis vinifera peptide
Match: GSVIVT01033376001 (assembled CDS)

HSP 1 Score: 60.8474 bits (146), Expect = 4.158e-10
Identity = 37/66 (56.06%), Postives = 42/66 (63.64%), Query Frame = 3 
Query:  399 FQGRSYLLQGI---PKKGNTRISFPSPLYALMTTGLIGKAQKWWEKGLQPNMKEIEGAGDLVESLL 587
            F G   +LQ I   PK+ N + S       LM    IGKAQKWWEKGLQPNMKE+ GA DLV+SLL
Sbjct:   67 FHGGRIVLQEIGSMPKRRNAQASC-----TLMGLA-IGKAQKWWEKGLQPNMKEVTGAQDLVDSLL 126
The following BLAST results are available for this feature:
BLAST of CF810493 vs. P. persica 1.0 peptide
Analysis Date: 2011-01-18 (BLAST: Vaccinium corymbosum unigene v1 vs Ppersica v1.0 peptide)
Total hits: 2
Match NameE-valueIdentityDescription
ppa009372m8.281e-1047.69[more]
ppa009412m5.368e-950.00[more]
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BLAST of CF810493 vs. TrEMBL
Analysis Date: 2011-01-18 (BLAST: Vaccinium corymbosum unigene v1 vs TrEMBL)
Total hits: 2
Match NameE-valueIdentityDescription
D7TI43|D7TI43_VITVI7.778e-856.06Whole genome shotgun sequence of line PN40024, sca... [more]
A5AQX7|A5AQX7_VITVI7.778e-856.06Putative uncharacterized protein OS=Vitis vinifera... [more]
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BLAST of CF810493 vs. Vitis vinifera peptide
Analysis Date: 2011-01-25 (BLAST: Vaccinium corymbosum unigene v1 vs Vitis vinifera peptide)
Total hits: 1
Match NameE-valueIdentityDescription
GSVIVT010333760014.158e-1056.06assembled CDS[more]
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InterPro
Analysis Name: InterProScan analysis for Vaccinium corymbosum unigene v1
Date Performed: 2011-01-18
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSEGsegsegcoord: 25..31
score: NAcoord: 57..71
score
NoneNo IPR availableSEGsegsegcoord: 18..29
score
NoneNo IPR availableSEGsegsegcoord: 15..21
score: NAcoord: 51..62
score

Properties
Property NameValue
Singlet in analysisVaccinium corymbosum unigene v1
Sequences
The following sequences are available for this feature:

EST sequence

>CF810493 ID=CF810493; Name=CF810493; organism=Vaccinium corymbosum; type=EST; length=588bp
AGCAAGCAAACTCATCTTTCAAGATTTCCTCGTGAAAAGATACAAACCCA
TCTGTAGTTTTTCCCAGAAGGGTCCTGGATCGATCCACAAATTTCGAGTC
GTTTCGACGCCCTTGATTTCTGAAAAACAGGCGAGAACAGGCGGAGAATC
AGGCGTTCAAAAAAAAAGAATTGATTTTCGATTAGGGTTTGGTAGGTTTG
TGTAGAGAGATGGAATTGAAAATGGCGGAGGCTATGATTAACAAAACCAT
CATGTTCTCGTCCTCTTCTTCTTCTTCGATTCAACATCACAATCATGGGG
TCGCTTTGTTTCCAACGAAATCATTAACCATGGTTTCTTCTGGAATTGGG
TTTCCGTCTCTTTCCATCCGATCATCTTCACCACCGTCCGACGATGATTT
TCAAGGCCGCAGTTATCTTCTTCAAGGCATACCCAAGAAAGGGAATACCA
GAATTTCTTTTCCTTCTCCTCTTTATGCACTGATGACCACAGGACTTATT
GGGAAAGCTCAAAAATGGTGGGAGAAAGGGCTTCAGCCCAACATGAAAGA
AATTGAAGGTGCCGGAGATCTTGTGGAATCCTTGTTGA
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Annotated Terms
The following terms have been associated with this EST:
Vocabulary: INTERPRO
TermDefinition
noIPRunintegrated