CF810772

EST Overview
NameCF810772
Unique NameCF810772
TypeEST
OrganismVaccinium corymbosum (northern highbush blueberry)
Sequence length617
Libraries
Library NameType
LIBEST_014530 cDNA cold acclimated Bluecrop librarycdna_library
Unigenes
This EST is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Vaccinium corymbosum unigene v1EST
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
Vaccinium corymbosum unigene v12011-01-18
BLAST: Vaccinium corymbosum unigene v1 vs TrEMBL2011-01-18
InterProScan analysis for Vaccinium corymbosum unigene v12011-01-18
Homology
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BLAST of CF810772 vs. TrEMBL
Match: Q6R9A5|Q6R9A5_MAIZE (Putative uncharacterized protein orf111-b OS=Zea mays GN=orf111-b PE=4 SV=1)

HSP 1 Score: 62.7734 bits (151), Expect = 5.966e-11
Identity = 29/45 (64.44%), Postives = 30/45 (66.67%), Query Frame = 2 
Query:  485 KQKGACRTHE-GLPVIYWXXGGDDVKSAWPLWAGPHTCYNGNYNG 616
            KQ+  C  H  G        GGDDVKSAWPLWAGPHTCYNGN NG
Sbjct:   41 KQRKRCVPHSRGTASEILEEGGDDVKSAWPLWAGPHTCYNGNDNG 85

HSP 2 Score: 28.8758 bits (63), Expect = 5.966e-11
Identity = 12/14 (85.71%), Postives = 13/14 (92.86%), Query Frame = 3 
Query:  420 GEPPGGVVRSGFST 461
            G+PPGGVVRSG ST
Sbjct:   23 GQPPGGVVRSGNST 36
The following BLAST results are available for this feature:
BLAST of CF810772 vs. TrEMBL
Analysis Date: 2011-01-18 (BLAST: Vaccinium corymbosum unigene v1 vs TrEMBL)
Total hits: 1
Match NameE-valueIdentityDescription
Q6R9A5|Q6R9A5_MAIZE5.966e-1164.44Putative uncharacterized protein orf111-b OS=Zea m... [more]
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InterPro
Analysis Name: InterProScan analysis for Vaccinium corymbosum unigene v1
Date Performed: 2011-01-18
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSEGsegsegcoord: 1..12
score
NoneNo IPR availableSEGsegsegcoord: 11..24
score
NoneNo IPR availableSEGsegsegcoord: 33..45
score

Properties
Property NameValue
Singlet in analysisVaccinium corymbosum unigene v1
Sequences
The following sequences are available for this feature:

EST sequence

>CF810772 ID=CF810772; Name=CF810772; organism=Vaccinium corymbosum; type=EST; length=617bp
TGAACAACAAAACCTGTCCTTAACGGGAGGGGACTGACTTTCATACAGGT
GCTGCATGGCTGTCGTCAGCTCGTGTCGTGAGATGTTTGGTTAAGTCCTA
TAACGAGCGAAACCCTCGTTTTGTGTTGCTGAGACATGCGCCTAAGGAAA
AAGTCTTTGCAACCGAAGTGAGCCGAGGAGCCGAGTGACGTGCCAGCGCT
ACTAATTGAGTGCCAGCACGTAGCTGTGCTGTCAGTAAGAAGGGAGCCGG
CGCCTTTCGAAGCCCTTTCGTCTGTGCGCTTTAGTTTGATTGCAGCTAGC
GCGCTTTACTAATAAGATAGAAAGGGCTTTTCTCGCTTGTTTAGTAAAGT
CAAGTTTTTGGCCTTATCTTGCAGGTGACGACGACGTCGAGTTGGCGGCG
GAGAAAGACTCGGCATTCAGGCGAGCCGCCCGGTGGTGTGGTACGTAGTG
GGTTTAGTACGCCCCGCCAAAACGGCTCCGAAACAAACAAAAAGGTGCGT
GCCGCACTCACGAAGGACTGCCAGTGATATACTGGANGNAAGGTGGGGAT
GACGTCAAGTCCGCATGGCCCTTATGGGCTGGGCCACACACGTGCTACAA
TGGCAATTACAATGGGB
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Annotated Terms
The following terms have been associated with this EST:
Vocabulary: INTERPRO
TermDefinition
noIPRunintegrated