CF810451

EST Overview
NameCF810451
Unique NameCF810451
TypeEST
OrganismVaccinium corymbosum (northern highbush blueberry)
Sequence length640
Libraries
Library NameType
LIBEST_014530 cDNA cold acclimated Bluecrop librarycdna_library
Unigenes
This EST is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Vaccinium corymbosum unigene v1EST
Homology
BLAST of CF810451 vs. Populus trichocarpa peptide v2.0
Match: POPTR_0298s00200.1 ()

HSP 1 Score: 52.7582 bits (125), Expect = 2.149e-7
Identity = 48/175 (27.43%), Postives = 68/175 (38.86%), Query Frame = 1
Query:   64 GSGGPIRTVQNGNDRGPYPARPNQVNPQPWKGNEVRQGPPPQNSNHNNQLVKCYNCAGYGHYSRNCPHPRKDGFTYGNXXXXXXXXXXNYGKQPMQ*NARPAHQNNWNGKQQVKVPQNGT-GRLYALHAEDHIQEQKPSVTQGTLLLFSTCVQALFDTGASHSFISVACVSTLGL 585
            GS G  R V  G   G   A P +      +G++ R     +          C++C   GH  + CPH   +G   G               +P+    RP        K + +  +  T GR+Y +  ED      P V  GTL L    V AL D GASHSF++   +S L +
Sbjct:  182 GSSGGARHVNAGKHPGDCSATPGRCYICRGEGHQWRDCQYLERG--------CFHCGETGHKKKECPHKATEG-VQGQGITTQSQQQSVTVDRPV----RPTQSGTSANKSRPRFQEERTRGRIYHMTQED--VGAMPDVVAGTLQLGLIQVYALIDPGASHSFVAHRIISNLNV 341          
BLAST of CF810451 vs. P. persica 1.0 peptide
Match: ppa021406m ()

HSP 1 Score: 57.3806 bits (137), Expect = 6.170e-9
Identity = 30/90 (33.33%), Postives = 52/90 (57.78%), Query Frame = 1
Query:  373 QNNWNGKQQVKVPQNGTGRLYALHA----EDHIQEQKPSVTQGTLLLFSTCVQALFDTGASHSFISVACVSTLGLDTEPLENQMTIASPL 630
            ++ +   +  K  QN     + LH      D  ++ +P+V +GT L+F+   + LFD GA++SFISV+  S LGL+ E +++ + + SPL
Sbjct:  159 RSRYQNPRSFKATQNSGFCYHCLHIGHYRRDLAKQNEPTVVEGTFLIFNLWARILFDPGATNSFISVSFASILGLEYEFMKSSLMVGSPL 248          
BLAST of CF810451 vs. TrEMBL
Match: Q53PJ3|Q53PJ3_ORYSJ (Retrotransposon protein, putative, Ty3-gypsy sub-class OS=Oryza sativa subsp. japonica GN=LOC_Os11g24270 PE=4 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 5.002e-12
Identity = 63/180 (35.00%), Postives = 78/180 (43.33%), Query Frame = 1
Query:  112 PYPARPNQVNPQPWKGNEVRQGP---PPQNSNHNNQLVKCYNCAGYGHYSRNCPHPR--KDG-FTYGNXXXXXXXXXXNYGKQPMQ*NARPAHQNNWNGKQQVK--VPQNGTGRLYALHAEDHIQEQKPSVTQGTLLLFSTCVQALFDTGASHSFISVACVSTLGLDTEPLENQMTIASP 627
            P P R   V P+P +   VRQ P           N  V CYNC   GHYS +CP+P+  K G ++ G                P Q    P  Q    G   V    P  G GRL  + AE+      P V  GT L+ S  +  LFD+GA+HSF+S      L L TE L + M I SP
Sbjct:  292 PQPPRQMYVPPRP-QTQLVRQVPRAVQAAGDASRNANVTCYNCGKKGHYSPSCPYPKTGKSGPYSQG---------------APQQPRGPPQVQPGQRGAPAVPKPAPTFGRGRLNHVTAEE--ATDAPGVVLGTFLVHSIPLTVLFDSGATHSFMSTLKAKQLDLKTEFLSDAMRIQSP 453          
BLAST of CF810451 vs. TrEMBL
Match: Q7XUI0|Q7XUI0_ORYSJ (OSJNBa0020J04.2 protein OS=Oryza sativa subsp. japonica GN=OSJNBa0020J04.2 PE=4 SV=2)

HSP 1 Score: 74.3294 bits (181), Expect = 8.532e-12
Identity = 61/214 (28.50%), Postives = 80/214 (37.38%), Query Frame = 1
Query:   82 RTVQNGNDRGPYPARPNQVNPQP--------WKGNEVRQGPPPQNSNHNNQL-------------------VKCYNCAGYGHYSRNCPHPRKDGFTYGNXXXXXXXXXXNYGKQPMQ*NARPAHQNNWNGKQQVKVPQN-----GTGRLYALHAEDHIQEQKPSVTQGTLLLFSTCVQALFDTGASHSFISVACVSTLGLDTEPLENQMTIASP 627
            RTV++   R    +R  Q+ PQ         WK   V    P   SN N  +                   V C+NC GYGHY+ NCPHPRK     G                 ++    P       G+   K PQ+     G GR    H      ++   +  G   + ST V+ LFD+GASHSFIS+       L    L   M + SP
Sbjct:  153 RTVEHNRKRRLAMSRLPQIVPQRLKGATSSGWKPPIVATNRPAAPSNFNRPVAIQNRTPTPTLAAPGAKMNVNCFNCGGYGHYANNCPHPRKTPVRTGT------------NAMTVRGTTTPV-----TGRGLFKTPQSNRTATGLGRGQVNHVRAEEAQEDQGILMGMFSINSTPVKVLFDSGASHSFISLKASQKHNLTLVGLRKPMIVHSP 349          
BLAST of CF810451 vs. TrEMBL
Match: Q2R193|Q2R193_ORYSJ (Retrotransposon protein, putative, Ty3-gypsy subclass OS=Oryza sativa subsp. japonica GN=LOC_Os11g39950 PE=4 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 7.223e-11
Identity = 62/214 (28.97%), Postives = 79/214 (36.92%), Query Frame = 1
Query:   82 RTVQNGNDRGPYPARPNQVNPQP--------WKGNEVRQGPPPQNSNHNNQL-------------------VKCYNCAGYGHYSRNCPHPRKDGFTYGNXXXXXXXXXXNYGKQPMQ*NARPAHQNNWNGKQQVKVPQN-----GTGRLYALHAEDHIQEQKPSVTQGTLLLFSTCVQALFDTGASHSFISVACVSTLGLDTEPLENQMTIASP 627
            RTV++   R    +RP Q  PQ         WK   V    P   SN N  +                   V C+NC  YGHY+ NCPHPRK     G                 ++    P       G+   K PQ+     G GR    H      ++   V  G   + ST V+ LFD+GASHSFIS+       L    L   M + SP
Sbjct:  559 RTVEHNRKRRLAMSRPPQTVPQRLKGATPSGWKPPVVVTNRPAAPSNFNRPVALQNRTPTPTLAAPGAKKNVDCFNCGEYGHYANNCPHPRKTPVRTG------------ANAMTVRGTTTPT-----VGRGLFKTPQSNRTTTGFGRGQVNHVRAEEAQEDQGVLMGMFSINSTPVKVLFDSGASHSFISLKASQKHNLTLVGLRKPMIVHSP 755          
BLAST of CF810451 vs. TrEMBL
Match: Q7XX43|Q7XX43_ORYSJ (OSJNBa0059D20.6 protein OS=Oryza sativa subsp. japonica GN=OSJNBa0059D20.6 PE=4 SV=2)

HSP 1 Score: 70.4774 bits (171), Expect = 1.232e-10
Identity = 51/189 (26.98%), Postives = 65/189 (34.39%), Query Frame = 1
Query:  118 PARPNQVNPQPWKGNEVRQGPPPQNSNHNNQLV-------------------KCYNCAGYGHYSRNCPHPRKDGFTYGNXXXXXXXXXXNYGKQPMQ*NARPAHQNNWNGKQQVKVPQNGTGRLYALHAEDHIQEQKPSVTQGTLLLFSTCVQALFDTGASHSFISVACVSTLGLDTEPLENQMTIASP 627
            P RP    P  W+   V    P  +SN +  +                     C+NC  YGH++  CPHP K     G                 +   A PA         Q      G GR    H      ++   V  G   L ST V+ LFD+GASHSFIS+       L    L   M + SP
Sbjct:  238 PQRPKGTTPSAWRPTVVTTSRPAASSNFHRPVTIQNRAPTPNQAATGSVRPGSCFNCGEYGHFANKCPHPNKTPIRTGA------------NATAIHGTATPAAGRGLFRTPQTNRTATGFGRGQVNHVRAEEAQEDQGVLMGMFSLNSTPVKVLFDSGASHSFISLKASQQHNLTRVKLRQPMLVHSP 414          
BLAST of CF810451 vs. TrEMBL
Match: Q6AV77|Q6AV77_ORYSJ (Retrotransposon protein, putative, Ty3-gypsy subclass OS=Oryza sativa subsp. japonica GN=OSJNBa0035N15.20 PE=4 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.609e-10
Identity = 60/202 (29.70%), Postives = 83/202 (41.09%), Query Frame = 1
Query:   22 EREESDFRTRRQGSGSGGPIRTVQNGNDRGPYPARPNQVNPQPWKGNEVRQGPPPQNSNHNNQLVKCYNCAGYGHYSRNCPHPRKDGFTYGNXXXXXXXXXXNYGKQPMQ*NARPAHQNNWNGKQQVKVPQNGTGRLYALHAEDHIQEQKPSVTQGTLLLFSTCVQALFDTGASHSFISVACVSTLGLDTEPLENQMTIASP 627
            +R  ++FR ++     G   R  Q  + +G    RP     QP +G    QGP             C+NC   GH++  CP PR+                        Q    P   NN  GK  ++      GR+  + AED +    P V  GT L++S     LFD+GASHSFISV  V  + L  E L N + I +P
Sbjct:  572 KRRLANFRNQQ-----GANQRPQQQQSQQGTRAPRPPTPAVQPSQGRRDAQGPQRL----------CFNCFEPGHFADKCPKPRR------------------------QQGQAPPRPNN-GGKDVIR------GRVNHVTAEDVLTT--PDVIVGTFLIYSIPATILFDSGASHSFISVPFVGRIQLGVERLRNPLLITTP 725          
BLAST of CF810451 vs. TrEMBL
Match: Q53QL2|Q53QL2_ORYSJ (Retrotransposon protein, putative, Ty3-gypsy sub-class OS=Oryza sativa subsp. japonica GN=LOC_Os11g19910 PE=4 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.609e-10
Identity = 60/209 (28.71%), Postives = 74/209 (35.41%), Query Frame = 1
Query:   82 RTVQNGNDRGPYPARPNQVNPQP--------WKGNEVRQGPPPQNSNHNNQLV-------------------KCYNCAGYGHYSRNCPHPRKDGFTYGNXXXXXXXXXXNYGKQPMQ*NARPAHQNNWNGKQQVKVPQNGTGRLYALHAEDHIQEQKPSVTQGTLLLFSTCVQALFDTGASHSFISVACVSTLGLDTEPLENQMTIASP 627
            RTV++ + R     RP Q  PQ         WK   V    P   SN N  +V                    C+NC  YGHY+ NCPHPRK     G                 ++    PA         Q      G GR    H      ++   V  G   + ST V+ LFD+GASHSFIS        L    L   M + SP
Sbjct:  218 RTVEHNHKRRLAMNRPPQGVPQRLKGATSSGWKPPIVAPNRPAAPSNFNRPVVIQNRTPTPTLAAPGAKKNVDCFNCGEYGHYANNCPHPRKTPVRTG------------ANAMTVRGTTTPAAGRGLFKTPQTNRTATGFGRGQVNHVRAEEAQEDQGVLMGMFSINSTPVKVLFDSGASHSFISRKASQKHNLTLVGLRKPMIVHSP 414          
BLAST of CF810451 vs. TrEMBL
Match: Q2QR60|Q2QR60_ORYSJ (Retrotransposon protein, putative, Ty3-gypsy subclass OS=Oryza sativa subsp. japonica GN=LOC_Os12g28690 PE=4 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.609e-10
Identity = 62/214 (28.97%), Postives = 78/214 (36.45%), Query Frame = 1
Query:   82 RTVQNGNDRGPYPARPNQVNPQPWKGNEVRQGPPPQN--------SNHNNQL-------------------VKCYNCAGYGHYSRNCPHPRKDGFTYGNXXXXXXXXXXNYGKQPMQ*NARPAHQNNWNGKQQVKVPQ-----NGTGRLYALHAEDHIQEQKPSVTQGTLLLFSTCVQALFDTGASHSFISVACVSTLGLDTEPLENQMTIASP 627
            RTV++   R    +RP Q  PQ  KG       PP          SN N  +                   V C+NC  YGHY+ NCPHPRK     G                 ++    PA      G+   K PQ      G GR    H      ++   V  G   L ST ++ LFD+GA HSFIS+       L    L   M + SP
Sbjct:  218 RTVEHNRKRRLAMSRPPQTMPQRLKGATPSGWKPPVMVTNRPAALSNFNRPVALQNRTPTPTLAAPGAKKNVDCFNCGKYGHYANNCPHPRKTPVRTG------------ANAMTVRGTTTPA-----VGRGLFKTPQPNRTTTGFGRGQVNHVRAEEAQEDQGVLMGMFSLNSTPIKVLFDSGALHSFISLKASQQHNLTRVKLRQPMLVHSP 414          
BLAST of CF810451 vs. TrEMBL
Match: Q7XUA3|Q7XUA3_ORYSJ (OSJNBa0019D11.8 protein OS=Oryza sativa subsp. japonica GN=OSJNBa0019D11.8 PE=4 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 2.101e-10
Identity = 56/194 (28.87%), Postives = 71/194 (36.60%), Query Frame = 1
Query:  118 PARPNQVNPQPWKGNEVRQGPPPQNSNHNNQL-------------------VKCYNCAGYGHYSRNCPHPRKDGFTYGNXXXXXXXXXXNYGKQPMQ*NARPAHQNNWNGKQQVKVPQN-----GTGRLYALHAEDHIQEQKPSVTQGTLLLFSTCVQALFDTGASHSFISVACVSTLGLDTEPLENQMTIASP 627
            P R     P  WK   +    P   SN N  +                   V C+NC  YGHY+ NCPHPRK     G                 ++    PA      G+   K PQ+     G GR    H      ++   V  G   + ST V+ LFD+GASHSFIS+       L    L   M + SP
Sbjct:  238 PQRLKGATPSGWKPPVMVTNRPAALSNFNRPVALQNRTPTPTLAAPGAKKNVDCFNCGEYGHYANNCPHPRKTPIRTG------------ANAMTVRGTTTPA-----VGRGLFKTPQSNRTTTGFGRGQVNHVRAEEAQEDQGVLMGMFSINSTPVKVLFDSGASHSFISLKASQKHNLTLVGLRKPMIVHSP 414          
BLAST of CF810451 vs. TrEMBL
Match: Q2R1L3|Q2R1L3_ORYSJ (Retrotransposon protein, putative, Ty3-gypsy subclass OS=Oryza sativa subsp. japonica GN=LOC_Os11g38820 PE=4 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 2.101e-10
Identity = 62/214 (28.97%), Postives = 79/214 (36.92%), Query Frame = 1
Query:   82 RTVQNGNDRGPYPARPNQVNPQPWKGNEVRQGPPPQN--------SNHNNQL-------------------VKCYNCAGYGHYSRNCPHPRKDGFTYGNXXXXXXXXXXNYGKQPMQ*NARPAHQNNWNGKQQVKVPQN-----GTGRLYALHAEDHIQEQKPSVTQGTLLLFSTCVQALFDTGASHSFISVACVSTLGLDTEPLENQMTIASP 627
            RTV++   R    + P Q  PQ  KG       PP          SN N  +                   V C+NC  YGHY+ NCPHPRK     G                 ++    PA      G+   K PQ+     G GR    H      ++   V  G   + ST V+ LFD+GASHSFIS+       L    L   M + SP
Sbjct:  596 RTVEHNRKRRLAMSHPPQTVPQRLKGAPPSGWKPPVMVTNRPAALSNFNRPVALQNRTPTPTLAAPGAKKNVDCFNCGEYGHYANNCPHPRKTPVRTG------------ANAMTVRGTTTPA-----IGRGLFKTPQSNRTATGFGRGQVNHVRAEEAQEDQGVLMGMFSINSTPVKVLFDSGASHSFISLKASQKHNLTLVGLRKPMIVHSP 792          
BLAST of CF810451 vs. TrEMBL
Match: Q01I31|Q01I31_ORYSA (OSIGBa0145G11.8 protein OS=Oryza sativa GN=OSIGBa0145G11.8 PE=4 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 2.101e-10
Identity = 56/194 (28.87%), Postives = 71/194 (36.60%), Query Frame = 1
Query:  118 PARPNQVNPQPWKGNEVRQGPPPQNSNHNNQL-------------------VKCYNCAGYGHYSRNCPHPRKDGFTYGNXXXXXXXXXXNYGKQPMQ*NARPAHQNNWNGKQQVKVPQN-----GTGRLYALHAEDHIQEQKPSVTQGTLLLFSTCVQALFDTGASHSFISVACVSTLGLDTEPLENQMTIASP 627
            P R     P  WK   +    P   SN N  +                   V C+NC  YGHY+ NCPHPRK     G                 ++    PA      G+   K PQ+     G GR    H      ++   V  G   + ST V+ LFD+GASHSFIS+       L    L   M + SP
Sbjct:  238 PQRLKGATPSGWKPPVMVTNRPAALSNFNRPVALQNRTPTPTLAAPGAKKNVDCFNCGEYGHYANNCPHPRKTPIRTG------------ANAMTVRGTTTPA-----VGRGLFKTPQSNRTTTGFGRGQVNHVRAEEAQEDQGVLMGMFSINSTPVKVLFDSGASHSFISLKASQKHNLTLVGLRKPMIVHSP 414          
BLAST of CF810451 vs. Vitis vinifera peptide
Match: GSVIVT01018780001 (assembled CDS)

HSP 1 Score: 63.929 bits (154), Expect = 5.702e-11
Identity = 31/73 (42.47%), Postives = 49/73 (67.12%), Query Frame = 1
Query:  412 QNGTGRLYALHAEDHIQEQKPSVTQGTLLLFSTCVQALFDTGASHSFISVACVSTLGLDTEPLENQMTIASPL 630
            +   GR++AL   +   E+   + +G +L++ST V+ LFDTGA+HSFIS +C + LGL +E +EN + I SP+
Sbjct:  397 RQAAGRVFALTPTE--PEEDALLVEGMILVYSTWVRVLFDTGATHSFISASCANALGLKSERVENLLLIESPM 467          
The following BLAST results are available for this feature:
BLAST of CF810451 vs. Populus trichocarpa peptide v2.0
Analysis Date: 2011-01-18 (BLAST: Vaccinium corymbosum unigene v1 vs Populus trichocarpa v2.0 peptide)
Total hits: 1
Match NameE-valueIdentityDescription
POPTR_0298s00200.12.149e-727.43[more]
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BLAST of CF810451 vs. P. persica 1.0 peptide
Analysis Date: 2011-01-18 (BLAST: Vaccinium corymbosum unigene v1 vs Ppersica v1.0 peptide)
Total hits: 1
Match NameE-valueIdentityDescription
ppa021406m6.170e-933.33[more]
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BLAST of CF810451 vs. TrEMBL
Analysis Date: 2011-01-18 (BLAST: Vaccinium corymbosum unigene v1 vs TrEMBL)
Total hits: 10
Match NameE-valueIdentityDescription
Q53PJ3|Q53PJ3_ORYSJ5.002e-1235.00Retrotransposon protein, putative, Ty3-gypsy sub-c... [more]
Q7XUI0|Q7XUI0_ORYSJ8.532e-1228.50OSJNBa0020J04.2 protein OS=Oryza sativa subsp. jap... [more]
Q2R193|Q2R193_ORYSJ7.223e-1128.97Retrotransposon protein, putative, Ty3-gypsy subcl... [more]
Q7XX43|Q7XX43_ORYSJ1.232e-1026.98OSJNBa0059D20.6 protein OS=Oryza sativa subsp. jap... [more]
Q6AV77|Q6AV77_ORYSJ1.609e-1029.70Retrotransposon protein, putative, Ty3-gypsy subcl... [more]
Q53QL2|Q53QL2_ORYSJ1.609e-1028.71Retrotransposon protein, putative, Ty3-gypsy sub-c... [more]
Q2QR60|Q2QR60_ORYSJ1.609e-1028.97Retrotransposon protein, putative, Ty3-gypsy subcl... [more]
Q7XUA3|Q7XUA3_ORYSJ2.101e-1028.87OSJNBa0019D11.8 protein OS=Oryza sativa subsp. jap... [more]
Q2R1L3|Q2R1L3_ORYSJ2.101e-1028.97Retrotransposon protein, putative, Ty3-gypsy subcl... [more]
Q01I31|Q01I31_ORYSA2.101e-1028.87OSIGBa0145G11.8 protein OS=Oryza sativa GN=OSIGBa0... [more]
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BLAST of CF810451 vs. Vitis vinifera peptide
Analysis Date: 2011-01-25 (BLAST: Vaccinium corymbosum unigene v1 vs Vitis vinifera peptide)
Total hits: 1
Match NameE-valueIdentityDescription
GSVIVT010187800015.702e-1142.47assembled CDS[more]
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InterPro
Analysis Name: InterProScan analysis for Vaccinium corymbosum unigene v1
Date Performed: 2011-01-18
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSEGsegsegcoord: 29..36
score
NoneNo IPR availableSEGsegsegcoord: 100..109
score
NoneNo IPR availableSUPERFAMILY57756Retrovirus zinc finger-like domainscoord: 66..94
score: 4.5
NoneNo IPR availableSEGsegsegcoord: 33..40
score
NoneNo IPR availableSEGsegsegcoord: 56..65
score
IPR001878Zinc finger, CCHC-typePFAMPF00098zf-CCHCcoord: 73..89
score: 1.8
IPR001878Zinc finger, CCHC-typeSMARTSM00343no descriptioncoord: 73..89
score: 0.
IPR001878Zinc finger, CCHC-typePROFILEPS50158ZF_CCHCcoord: 73..88
score: 9
IPR013084Zinc finger, CCHC retroviral-typeGENE3D4.10.60.10no descriptioncoord: 65..94
score: 1.2
IPR001969Peptidase aspartic, active sitePROSITEPS00141ASP_PROTEASEcoord: 56..67
score
IPR013242Retroviral aspartyl proteasePFAMPF08284RVP_2coord: 27..91
score: 1.7

Properties
Property NameValue
Singlet in analysisVaccinium corymbosum unigene v1
Sequences
The following sequences are available for this feature:

EST sequence

>CF810451 ID=CF810451; Name=CF810451; organism=Vaccinium corymbosum; type=EST; length=640bp
GTCAAATGTGCCCTAAGGATGGAGAGAGAAGAATCAGATTTTAGGACTAG
GCGTCAAGGAAGTGGTTCAGGAGGACCTATCAGGACTGTGCAGAACGGCA
ACGATCGTGGGCCCTACCCAGCCAGACCTAACCAAGTTAACCCCCAGCCT
TGGAAGGGGAATGAAGTCAGGCAAGGACCGCCGCCACAAAATTCTAACCA
TAACAACCAACTAGTCAAGTGTTACAACTGTGCGGGCTATGGACACTACA
GTCGCAACTGTCCTCATCCGAGGAAGGACGGTTTCACCTATGGGAATCAG
CAGCAGCAGCAGCCGCAGCCGCTTCAGAACTATGGCAAACAGCCTATGCA
ATAGAACGCTAGGCCAGCACATCAGAATAACTGGAATGGAAAGCAGCAGG
TCAAGGTACCTCAGAACGGGACAGGACGCTTGTATGCTCTGCATGCTGAG
GATCACATCCAGGAGCAGAAACCTTCTGTGACTCAAGGTACGCTACTGTT
ATTCAGTACCTGCGTACAAGCATTATTTGACACTGGAGCATCGCATTCGT
TTATATCAGTTGCATGCGTATCTACGCTAGGATTAGACACTGAACCCCTA
GAGAACCAGATGACAATAGCATCACCTTTAAGCGCTAGNT
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Annotated Terms
The following terms have been associated with this EST:
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
GO:0008270zinc ion binding
GO:0004190aspartic-type endopeptidase activity
Vocabulary: Biological Process
TermDefinition
GO:0006508proteolysis
Vocabulary: INTERPRO
TermDefinition
IPR001878Znf_CCHC
IPR013084Zinc finger, CCHC retroviral-type
noIPRunintegrated
IPR001969Aspartic_peptidase_AS
IPR013242RVP_2