CF810600 | GDV

EST Overview


Name	CF810600
Unique Name	CF810600
Type	EST
Organism	Vaccinium corymbosum (northern highbush blueberry)
Sequence length	671

Libraries


Library Name	Type
LIBEST_014530 cDNA cold acclimated Bluecrop library	cdna_library

Unigenes

This EST is part of the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
	Vaccinium corymbosum unigene v1	EST

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
Vaccinium corymbosum unigene v1	2011-01-18
BLAST: Vaccinium corymbosum unigene v1 vs Populus trichocarpa v2.0 peptide	2011-01-18
BLAST: Vaccinium corymbosum unigene v1 vs Ppersica v1.0 peptide	2011-01-18
BLAST: Vaccinium corymbosum unigene v1 vs TrEMBL	2011-01-18
BLAST: Vaccinium corymbosum unigene v1 vs Vitis vinifera peptide	2011-01-25
BLAST: Vaccinium corymbosum unigene v1 vs TAIR 10 peptide	2011-02-10
InterProScan analysis for Vaccinium corymbosum unigene v1	2011-01-18

Homology

[Close]

BLAST of CF810600 vs. Populus trichocarpa peptide v2.0
Match: POPTR_0002s09150.4 ()

HSP 1 Score: 356.295 bits (913), Expect = 9.756e-99
Identity = 175/223 (78.48%), Postives = 191/223 (85.65%), Query Frame = 2

Query:    2 SLGHMAITSERLHKQSVVIKQICKLFPQRRLNLEGERKDGSSGQYDQICNARLPRGLDPHSISSEELAASLGYMVQLLNLVVHNVAAPALHNSGFAGSCSRIWQRDSYWDARPSSRSNEYPLFIPRQNSCSTGGDTSWSDRSSSNFGVTSVESEKKAHLDXXXXXXXXXXXXXXXXVETHQDLQKGISLLKKSVACVTAYCYNSLCLDVPSELSTFEAFAKLL 670
            SLGHMAITSE LHKQSVVIKQICKLFPQRR+N++GER    SGQYDQICNARLPRGLDPHS+SSEELAASLGYMVQLLNLV HN+AAP LHN+GFAGSCSRIWQRDSYW+A PSSRSNEYPLFIPRQN CST  + SW+D+SSSNFGV S+ESE++ HLD                VETH+DLQKG+SLLKKSVACVTAYCYN LCLDVPS+ STFEAFAKLL
Sbjct:  135 SLGHMAITSELLHKQSVVIKQICKLFPQRRVNVDGERN--FSGQYDQICNARLPRGLDPHSVSSEELAASLGYMVQLLNLVAHNLAAPTLHNAGFAGSCSRIWQRDSYWNACPSSRSNEYPLFIPRQNYCSTSSENSWTDKSSSNFGVASMESERRPHLDSTRSNSFNYSSVSPHSVETHKDLQKGVSLLKKSVACVTAYCYNLLCLDVPSDTSTFEAFAKLL 355

[Close]

BLAST of CF810600 vs. Populus trichocarpa peptide v2.0
Match: POPTR_0002s09150.3 ()

HSP 1 Score: 356.295 bits (913), Expect = 9.756e-99
Identity = 175/223 (78.48%), Postives = 191/223 (85.65%), Query Frame = 2

Query:    2 SLGHMAITSERLHKQSVVIKQICKLFPQRRLNLEGERKDGSSGQYDQICNARLPRGLDPHSISSEELAASLGYMVQLLNLVVHNVAAPALHNSGFAGSCSRIWQRDSYWDARPSSRSNEYPLFIPRQNSCSTGGDTSWSDRSSSNFGVTSVESEKKAHLDXXXXXXXXXXXXXXXXVETHQDLQKGISLLKKSVACVTAYCYNSLCLDVPSELSTFEAFAKLL 670
            SLGHMAITSE LHKQSVVIKQICKLFPQRR+N++GER    SGQYDQICNARLPRGLDPHS+SSEELAASLGYMVQLLNLV HN+AAP LHN+GFAGSCSRIWQRDSYW+A PSSRSNEYPLFIPRQN CST  + SW+D+SSSNFGV S+ESE++ HLD                VETH+DLQKG+SLLKKSVACVTAYCYN LCLDVPS+ STFEAFAKLL
Sbjct:  135 SLGHMAITSELLHKQSVVIKQICKLFPQRRVNVDGERN--FSGQYDQICNARLPRGLDPHSVSSEELAASLGYMVQLLNLVAHNLAAPTLHNAGFAGSCSRIWQRDSYWNACPSSRSNEYPLFIPRQNYCSTSSENSWTDKSSSNFGVASMESERRPHLDSTRSNSFNYSSVSPHSVETHKDLQKGVSLLKKSVACVTAYCYNLLCLDVPSDTSTFEAFAKLL 355

[Close]

BLAST of CF810600 vs. Populus trichocarpa peptide v2.0
Match: POPTR_0002s09150.2 ()

HSP 1 Score: 356.295 bits (913), Expect = 9.756e-99
Identity = 175/223 (78.48%), Postives = 191/223 (85.65%), Query Frame = 2

Query:    2 SLGHMAITSERLHKQSVVIKQICKLFPQRRLNLEGERKDGSSGQYDQICNARLPRGLDPHSISSEELAASLGYMVQLLNLVVHNVAAPALHNSGFAGSCSRIWQRDSYWDARPSSRSNEYPLFIPRQNSCSTGGDTSWSDRSSSNFGVTSVESEKKAHLDXXXXXXXXXXXXXXXXVETHQDLQKGISLLKKSVACVTAYCYNSLCLDVPSELSTFEAFAKLL 670
            SLGHMAITSE LHKQSVVIKQICKLFPQRR+N++GER    SGQYDQICNARLPRGLDPHS+SSEELAASLGYMVQLLNLV HN+AAP LHN+GFAGSCSRIWQRDSYW+A PSSRSNEYPLFIPRQN CST  + SW+D+SSSNFGV S+ESE++ HLD                VETH+DLQKG+SLLKKSVACVTAYCYN LCLDVPS+ STFEAFAKLL
Sbjct:  135 SLGHMAITSELLHKQSVVIKQICKLFPQRRVNVDGERN--FSGQYDQICNARLPRGLDPHSVSSEELAASLGYMVQLLNLVAHNLAAPTLHNAGFAGSCSRIWQRDSYWNACPSSRSNEYPLFIPRQNYCSTSSENSWTDKSSSNFGVASMESERRPHLDSTRSNSFNYSSVSPHSVETHKDLQKGVSLLKKSVACVTAYCYNLLCLDVPSDTSTFEAFAKLL 355

[Close]

BLAST of CF810600 vs. Populus trichocarpa peptide v2.0
Match: POPTR_0002s09150.1 ()

HSP 1 Score: 340.117 bits (871), Expect = 7.235e-94
Identity = 175/254 (68.90%), Postives = 191/254 (75.20%), Query Frame = 2

Query:    2 SLGHMAITSERLHKQSVVIKQICKLFPQRRLNLEGERKDGSSGQYDQICNARLPRGLDPHSISSEELAASLGYMVQLLNLVVHNVAAPALHNSGFAGSCSRIWQRDSYWDARPSSR-------------------------------SNEYPLFIPRQNSCSTGGDTSWSDRSSSNFGVTSVESEKKAHLDXXXXXXXXXXXXXXXXVETHQDLQKGISLLKKSVACVTAYCYNSLCLDVPSELSTFEAFAKLL 670
            SLGHMAITSE LHKQSVVIKQICKLFPQRR+N++GER    SGQYDQICNARLPRGLDPHS+SSEELAASLGYMVQLLNLV HN+AAP LHN+GFAGSCSRIWQRDSYW+A PSSR                               SNEYPLFIPRQN CST  + SW+D+SSSNFGV S+ESE++ HLD                VETH+DLQKG+SLLKKSVACVTAYCYN LCLDVPS+ STFEAFAKLL
Sbjct:  135 SLGHMAITSELLHKQSVVIKQICKLFPQRRVNVDGERN--FSGQYDQICNARLPRGLDPHSVSSEELAASLGYMVQLLNLVAHNLAAPTLHNAGFAGSCSRIWQRDSYWNACPSSRRYFDWKSLCFGISVAKFELLLLSELNILCACSNEYPLFIPRQNYCSTSSENSWTDKSSSNFGVASMESERRPHLDSTRSNSFNYSSVSPHSVETHKDLQKGVSLLKKSVACVTAYCYNLLCLDVPSDTSTFEAFAKLL 386

[Close]

BLAST of CF810600 vs. P. persica 1.0 peptide
Match: ppa005055m ()

HSP 1 Score: 370.548 bits (950), Expect = 3.572e-103
Identity = 180/223 (80.72%), Postives = 194/223 (87.00%), Query Frame = 2

Query:    2 SLGHMAITSERLHKQSVVIKQICKLFPQRRLNLEGERKDGSSGQYDQICNARLPRGLDPHSISSEELAASLGYMVQLLNLVVHNVAAPALHNSGFAGSCSRIWQRDSYWDARPSSRSNEYPLFIPRQNSCSTGGDTSWSDRSSSNFGVTSVESEKKAHLDXXXXXXXXXXXXXXXXVETHQDLQKGISLLKKSVACVTAYCYNSLCLDVPSELSTFEAFAKLL 670
            +LGHMAITSERLHKQSVVIKQICKLFPQRR+ ++ +RKD S GQYDQICNA LPRGLDPHS+ SEELAASLGYMVQLLNLVV N+AAPALHNSGFAGSCSRIWQRDSYWDARPSSRSNEYPLFIPRQN CST G+ SWSDRSSSNFGV S++SE+K HLD                VETH+DLQ+GISLLKKSVAC+TAYCYNSLCLDVPSE STFEAFAKLL
Sbjct:  136 NLGHMAITSERLHKQSVVIKQICKLFPQRRVTVDAKRKDASGGQYDQICNACLPRGLDPHSVPSEELAASLGYMVQLLNLVVQNLAAPALHNSGFAGSCSRIWQRDSYWDARPSSRSNEYPLFIPRQNYCSTSGENSWSDRSSSNFGVASIDSERKPHLDSSGSSSFNYTSASQHSVETHKDLQRGISLLKKSVACITAYCYNSLCLDVPSEASTFEAFAKLL 358

[Close]

BLAST of CF810600 vs. P. persica 1.0 peptide
Match: ppa005050m ()

HSP 1 Score: 370.548 bits (950), Expect = 3.572e-103
Identity = 180/223 (80.72%), Postives = 194/223 (87.00%), Query Frame = 2

Query:    2 SLGHMAITSERLHKQSVVIKQICKLFPQRRLNLEGERKDGSSGQYDQICNARLPRGLDPHSISSEELAASLGYMVQLLNLVVHNVAAPALHNSGFAGSCSRIWQRDSYWDARPSSRSNEYPLFIPRQNSCSTGGDTSWSDRSSSNFGVTSVESEKKAHLDXXXXXXXXXXXXXXXXVETHQDLQKGISLLKKSVACVTAYCYNSLCLDVPSELSTFEAFAKLL 670
            +LGHMAITSERLHKQSVVIKQICKLFPQRR+ ++ +RKD S GQYDQICNA LPRGLDPHS+ SEELAASLGYMVQLLNLVV N+AAPALHNSGFAGSCSRIWQRDSYWDARPSSRSNEYPLFIPRQN CST G+ SWSDRSSSNFGV S++SE+K HLD                VETH+DLQ+GISLLKKSVAC+TAYCYNSLCLDVPSE STFEAFAKLL
Sbjct:  136 NLGHMAITSERLHKQSVVIKQICKLFPQRRVTVDAKRKDASGGQYDQICNACLPRGLDPHSVPSEELAASLGYMVQLLNLVVQNLAAPALHNSGFAGSCSRIWQRDSYWDARPSSRSNEYPLFIPRQNYCSTSGENSWSDRSSSNFGVASIDSERKPHLDSSGSSSFNYTSASQHSVETHKDLQRGISLLKKSVACITAYCYNSLCLDVPSEASTFEAFAKLL 358

[Close]

BLAST of CF810600 vs. TrEMBL
Match: B9T6K6|B9T6K6_RICCO (DNA-directed RNA polymerase II, putative OS=Ricinus communis GN=RCOM_0261650 PE=4 SV=1)

HSP 1 Score: 360.918 bits (925), Expect = 5.038e-98
Identity = 178/223 (79.82%), Postives = 192/223 (86.10%), Query Frame = 2

Query:    2 SLGHMAITSERLHKQSVVIKQICKLFPQRRLNLEGERKDGSSGQYDQICNARLPRGLDPHSISSEELAASLGYMVQLLNLVVHNVAAPALHNSGFAGSCSRIWQRDSYWDARPSSRSNEYPLFIPRQNSCSTGGDTSWSDRSSSNFGVTSVESEKKAHLDXXXXXXXXXXXXXXXXVETHQDLQKGISLLKKSVACVTAYCYNSLCLDVPSELSTFEAFAKLL 670
            SLGHMAITSE LH  SV +KQICKLFPQRR+ +EGE+KDGSSGQYDQICNARLPRGLDPHSI SEELAASLGYMVQLLNLVVHN+AAPALHNSGFAGSCSRIWQRDSYW+ARPSSRSNEYPLFIPRQ  CST G+ SW+DRSSSNFGV S+ESE++A LD                VETH+DLQKGISL+KKSVACVTAY YN LCLDVP+E STFEAFAKLL
Sbjct:  135 SLGHMAITSELLHNLSVTVKQICKLFPQRRVIVEGEKKDGSSGQYDQICNARLPRGLDPHSIPSEELAASLGYMVQLLNLVVHNLAAPALHNSGFAGSCSRIWQRDSYWNARPSSRSNEYPLFIPRQRYCSTSGENSWTDRSSSNFGVASMESERRARLDSSRSSSFNYNSASPHSVETHKDLQKGISLMKKSVACVTAYGYNLLCLDVPAEASTFEAFAKLL 357

[Close]

BLAST of CF810600 vs. TrEMBL
Match: B9GUI0|B9GUI0_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_816318 PE=4 SV=1)

HSP 1 Score: 356.295 bits (913), Expect = 1.241e-96
Identity = 175/223 (78.48%), Postives = 191/223 (85.65%), Query Frame = 2

Query:    2 SLGHMAITSERLHKQSVVIKQICKLFPQRRLNLEGERKDGSSGQYDQICNARLPRGLDPHSISSEELAASLGYMVQLLNLVVHNVAAPALHNSGFAGSCSRIWQRDSYWDARPSSRSNEYPLFIPRQNSCSTGGDTSWSDRSSSNFGVTSVESEKKAHLDXXXXXXXXXXXXXXXXVETHQDLQKGISLLKKSVACVTAYCYNSLCLDVPSELSTFEAFAKLL 670
            SLGHMAITSE LHKQSVVIKQICKLFPQRR+N++GER    SGQYDQICNARLPRGLDPHS+SSEELAASLGYMVQLLNLV HN+AAP LHN+GFAGSCSRIWQRDSYW+A PSSRSNEYPLFIPRQN CST  + SW+D+SSSNFGV S+ESE++ HLD                VETH+DLQKG+SLLKKSVACVTAYCYN LCLDVPS+ STFEAFAKLL
Sbjct:  135 SLGHMAITSELLHKQSVVIKQICKLFPQRRVNVDGERN--FSGQYDQICNARLPRGLDPHSVSSEELAASLGYMVQLLNLVAHNLAAPTLHNAGFAGSCSRIWQRDSYWNACPSSRSNEYPLFIPRQNYCSTSSENSWTDKSSSNFGVASMESERRPHLDSTRSNSFNYSSVSPHSVETHKDLQKGVSLLKKSVACVTAYCYNLLCLDVPSDTSTFEAFAKLL 355

[Close]

BLAST of CF810600 vs. TrEMBL
Match: Q8VYD5|Q8VYD5_ARATH (Putative uncharacterized protein At4g08540 OS=Arabidopsis thaliana GN=At4g08540 PE=2 SV=1)

HSP 1 Score: 331.643 bits (849), Expect = 3.273e-89
Identity = 162/224 (72.32%), Postives = 187/224 (83.48%), Query Frame = 2

Query:    2 SLGHMAITSERLHKQSVVIKQICKLFPQRRLNLEGERKDGSSGQYDQICNARLPRGLDPHSISSEELAASLGYMVQLLNLVVHNVAAPALHNSGFAGSCSRIWQRDSYWDARPSSRSNEYPLFIPRQNSCSTGGDTSWSDRSSSNFGVTSVESEKK-AHLDXXXXXXXXXXXXXXXXVETHQDLQKGISLLKKSVACVTAYCYNSLCLDVPSELSTFEAFAKLL 670
            SLGHMAI+SERLHKQSVV+KQICKLFP RR++ +GE ++GS  QYD ICN+RLP GLDPHSI SEELA SLGYMVQLLNLVVHN+AAPALH+SGFAGSCSRIWQRDSYWD R S+RSNEYPLFIPR+N CST  + SW+D++SSNFGV S+ES++K   LD                +E+H+DLQKGI+LLKKSVAC+TAYCYNSLCL+VP E STFEAFAKLL
Sbjct:  135 SLGHMAISSERLHKQSVVVKQICKLFPLRRVSFDGESQNGSVRQYDVICNSRLPSGLDPHSIPSEELAVSLGYMVQLLNLVVHNLAAPALHSSGFAGSCSRIWQRDSYWDGRTSTRSNEYPLFIPRRNYCSTSVENSWTDKNSSNFGVASMESDRKEPRLDSPGSNSFMYSSASPHSIESHRDLQKGIALLKKSVACLTAYCYNSLCLEVPPEASTFEAFAKLL 358

[Close]

BLAST of CF810600 vs. TrEMBL
Match: Q8H1E1|Q8H1E1_ARATH (Putative uncharacterized protein At4g08540 OS=Arabidopsis thaliana GN=At4g08540 PE=2 SV=1)

HSP 1 Score: 331.643 bits (849), Expect = 3.273e-89
Identity = 162/224 (72.32%), Postives = 187/224 (83.48%), Query Frame = 2

Query:    2 SLGHMAITSERLHKQSVVIKQICKLFPQRRLNLEGERKDGSSGQYDQICNARLPRGLDPHSISSEELAASLGYMVQLLNLVVHNVAAPALHNSGFAGSCSRIWQRDSYWDARPSSRSNEYPLFIPRQNSCSTGGDTSWSDRSSSNFGVTSVESEKK-AHLDXXXXXXXXXXXXXXXXVETHQDLQKGISLLKKSVACVTAYCYNSLCLDVPSELSTFEAFAKLL 670
            SLGHMAI+SERLHKQSVV+KQICKLFP RR++ +GE ++GS  QYD ICN+RLP GLDPHSI SEELA SLGYMVQLLNLVVHN+AAPALH+SGFAGSCSRIWQRDSYWD R S+RSNEYPLFIPR+N CST  + SW+D++SSNFGV S+ES++K   LD                +E+H+DLQKGI+LLKKSVAC+TAYCYNSLCL+VP E STFEAFAKLL
Sbjct:  135 SLGHMAISSERLHKQSVVVKQICKLFPLRRVSFDGESQNGSVRQYDVICNSRLPSGLDPHSIPSEELAVSLGYMVQLLNLVVHNLAAPALHSSGFAGSCSRIWQRDSYWDGRTSTRSNEYPLFIPRRNYCSTSVENSWTDKNSSNFGVASMESDRKEPRLDSPGSNSFKYSSASPHSIESHRDLQKGIALLKKSVACLTAYCYNSLCLEVPPEASTFEAFAKLL 358

[Close]

BLAST of CF810600 vs. TrEMBL
Match: Q9M0T0|Q9M0T0_ARATH (Putative uncharacterized protein AT4g08540 OS=Arabidopsis thaliana GN=AT4g08540 PE=4 SV=1)

HSP 1 Score: 280.411 bits (716), Expect = 8.654e-74
Identity = 141/225 (62.67%), Postives = 169/225 (75.11%), Query Frame = 2

Query:   20 ITSERLHKQSVVIKQICKLFPQR-------RLNLEGERKDGSSGQYDQICNARLPRGLDPHSISSEELAASLGYMVQLLNLVVHNVAAPALHNSGFAGSCSRIWQRDSYWDARPSSRSNEYPLFIPRQNSCSTGGDTSWSDRSSSNFGVTSVESEKK-AHLDXXXXXXXXXXXXXXXXVETHQDLQKGISLLKKSVACVTAYCYNSLCLDVPSELSTFEAFAKLL 670
            + S R   +   ++Q+ K FP          ++ +GE ++GS  QYD ICN+RLP GLDPHSI SEELA SLGYMVQLLNLVVHN+AAPALH+SGFAGSCSRIWQRDSYWD R S+RSNEYPLFIPR+N CST  + SW+D++SSNFGV S+ES++K   LD                +E+H+DLQKGI+LLKKSVAC+TAYCYNSLCL+VP E STFEAFAKLL
Sbjct:  108 LDSARSTLEKTRVEQVEKYFPNLICTQSLGHVSFDGESQNGSVRQYDVICNSRLPSGLDPHSIPSEELAVSLGYMVQLLNLVVHNLAAPALHSSGFAGSCSRIWQRDSYWDGRTSTRSNEYPLFIPRRNYCSTSVENSWTDKNSSNFGVASMESDRKEPRLDSPGSNSFKYSSASPHSIESHRDLQKGIALLKKSVACLTAYCYNSLCLEVPPEASTFEAFAKLL 332

[Close]

BLAST of CF810600 vs. TrEMBL
Match: D7M8G2|D7M8G2_ARALY (Putative uncharacterized protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_351968 PE=4 SV=1)

HSP 1 Score: 274.248 bits (700), Expect = 6.202e-72
Identity = 144/224 (64.29%), Postives = 163/224 (72.77%), Query Frame = 2

Query:    2 SLGHMAITSERLHKQSVVIKQICKLFPQRRLNLEGERKDGSSGQYDQICNARLPRGLDPHSISSEELAASLGYMVQLLNLVVHNVAAPALHNSGFAGSCSRIWQRDSYWDARPSSRSNEYPLFIPRQNSCSTGGDTSWSDRSSSNFGVTSVESEKK-AHLDXXXXXXXXXXXXXXXXVETHQDLQKGISLLKKSVACVTAYCYNSLCLDVPSELSTFEAFAKLL 670
            SLGHMAI+SERLHKQSVV+KQICKLFP RR++ +GE ++GS  QYD ICN+RLP GLDPHSI SEELA SLGYMVQLLNLVV NVAAP LH+SGFAGSCSRIWQRDSYWDAR S+R                           SNFGV S+ES++K   LD                +E+H+DLQKGI+LLKKSVAC+TAYCYNSLCL+VP E STFEAFAKLL
Sbjct:  135 SLGHMAISSERLHKQSVVVKQICKLFPLRRVSFDGESQNGSVRQYDVICNSRLPSGLDPHSIPSEELAVSLGYMVQLLNLVVQNVAAPGLHSSGFAGSCSRIWQRDSYWDARTSTR---------------------------SNFGVASMESDRKEPRLDSTGRNSFKYSSASPHSIESHRDLQKGIALLKKSVACLTAYCYNSLCLEVPPEASTFEAFAKLL 331

[Close]

BLAST of CF810600 vs. TrEMBL
Match: B8B4V4|B8B4V4_ORYSI (Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_26942 PE=4 SV=1)

HSP 1 Score: 268.47 bits (685), Expect = 3.403e-70
Identity = 135/222 (60.81%), Postives = 162/222 (72.97%), Query Frame = 2

Query:    5 LGHMAITSERLHKQSVVIKQICKLFPQRRLNLEGERKDGSSGQYDQICNARLPRGLDPHSISSEELAASLGYMVQLLNLVVHNVAAPALHNSGFAGSCSRIWQRDSYWDARPSSRSNEYPLFIPRQNSCSTGGDTSWSDRSSSNFGVTSVESEKKAHLDXXXXXXXXXXXXXXXXVETHQDLQKGISLLKKSVACVTAYCYNSLCLDVPSELSTFEAFAKLL 670
            +G MA TSE L  QS  +KQ+C+LFP RR+  +GE+ DG +G YD ICNARLPRGLDPHS+ SEEL+ASLGYM+QLL++VV  +AAPALH SGF  SCSR+WQR SYW  R  S+S  YPLFIPR+N+CS G D SW++  S NFGV SV+S+ K+ LD                +E HQDLQ+GISLLK SV  +T Y YNSL +DVPS LSTFEAFAKLL
Sbjct:  132 MGLMATTSEHLKMQSKAMKQLCRLFPLRRVIKDGEQNDGYNGPYDVICNARLPRGLDPHSVPSEELSASLGYMLQLLSIVVPILAAPALHISGFGASCSRVWQRSSYWSTR-QSQSKVYPLFIPRKNNCSVGEDNSWTESGSGNFGVQSVDSDNKSVLDSKRSNSFNFSIASSHSMERHQDLQRGISLLKTSVTAITTYYYNSLGMDVPSNLSTFEAFAKLL 352

[Close]

BLAST of CF810600 vs. TrEMBL
Match: Q7XIG6|Q7XIG6_ORYSJ (Os07g0626300 protein OS=Oryza sativa subsp. japonica GN=OJ1339_F05.121-1 PE=2 SV=1)

HSP 1 Score: 266.929 bits (681), Expect = 9.901e-70
Identity = 134/222 (60.36%), Postives = 161/222 (72.52%), Query Frame = 2

Query:    5 LGHMAITSERLHKQSVVIKQICKLFPQRRLNLEGERKDGSSGQYDQICNARLPRGLDPHSISSEELAASLGYMVQLLNLVVHNVAAPALHNSGFAGSCSRIWQRDSYWDARPSSRSNEYPLFIPRQNSCSTGGDTSWSDRSSSNFGVTSVESEKKAHLDXXXXXXXXXXXXXXXXVETHQDLQKGISLLKKSVACVTAYCYNSLCLDVPSELSTFEAFAKLL 670
            +G MA TSE L  QS  +KQ+C+LFP RR+  +GE+ DG +G YD ICNARLPRGLDPHS+ SEEL+ASLGYM+QLL++VV  +AAP LH SGF  SCSR+WQR SYW  R  S+S  YPLFIPR+N+CS G D SW++  S NFGV SV+S+ K+ LD                +E HQDLQ+GISLLK SV  +T Y YNSL +DVPS LSTFEAFAKLL
Sbjct:  143 MGLMATTSEHLKMQSKAMKQLCRLFPLRRVIKDGEQNDGYNGPYDVICNARLPRGLDPHSVPSEELSASLGYMLQLLSIVVPILAAPVLHISGFGASCSRVWQRSSYWSTR-QSQSKVYPLFIPRKNNCSVGEDNSWTESGSGNFGVQSVDSDNKSVLDSKRSNSFNFSIASSHSMERHQDLQRGISLLKTSVTAITTYYYNSLGMDVPSNLSTFEAFAKLL 363

[Close]

BLAST of CF810600 vs. TrEMBL
Match: Q7XIG5|Q7XIG5_ORYSJ (Putative uncharacterized protein OJ1339_F05.121-2 OS=Oryza sativa subsp. japonica GN=OJ1339_F05.121-2 PE=4 SV=1)

HSP 1 Score: 266.929 bits (681), Expect = 9.901e-70
Identity = 134/222 (60.36%), Postives = 161/222 (72.52%), Query Frame = 2

Query:    5 LGHMAITSERLHKQSVVIKQICKLFPQRRLNLEGERKDGSSGQYDQICNARLPRGLDPHSISSEELAASLGYMVQLLNLVVHNVAAPALHNSGFAGSCSRIWQRDSYWDARPSSRSNEYPLFIPRQNSCSTGGDTSWSDRSSSNFGVTSVESEKKAHLDXXXXXXXXXXXXXXXXVETHQDLQKGISLLKKSVACVTAYCYNSLCLDVPSELSTFEAFAKLL 670
            +G MA TSE L  QS  +KQ+C+LFP RR+  +GE+ DG +G YD ICNARLPRGLDPHS+ SEEL+ASLGYM+QLL++VV  +AAP LH SGF  SCSR+WQR SYW  R  S+S  YPLFIPR+N+CS G D SW++  S NFGV SV+S+ K+ LD                +E HQDLQ+GISLLK SV  +T Y YNSL +DVPS LSTFEAFAKLL
Sbjct:   11 MGLMATTSEHLKMQSKAMKQLCRLFPLRRVIKDGEQNDGYNGPYDVICNARLPRGLDPHSVPSEELSASLGYMLQLLSIVVPILAAPVLHISGFGASCSRVWQRSSYWSTR-QSQSKVYPLFIPRKNNCSVGEDNSWTESGSGNFGVQSVDSDNKSVLDSKRSNSFNFSIASSHSMERHQDLQRGISLLKTSVTAITTYYYNSLGMDVPSNLSTFEAFAKLL 231

[Close]

BLAST of CF810600 vs. TrEMBL
Match: B9FUB9|B9FUB9_ORYSJ (Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_25197 PE=4 SV=1)

HSP 1 Score: 266.929 bits (681), Expect = 9.901e-70
Identity = 134/222 (60.36%), Postives = 161/222 (72.52%), Query Frame = 2

Query:    5 LGHMAITSERLHKQSVVIKQICKLFPQRRLNLEGERKDGSSGQYDQICNARLPRGLDPHSISSEELAASLGYMVQLLNLVVHNVAAPALHNSGFAGSCSRIWQRDSYWDARPSSRSNEYPLFIPRQNSCSTGGDTSWSDRSSSNFGVTSVESEKKAHLDXXXXXXXXXXXXXXXXVETHQDLQKGISLLKKSVACVTAYCYNSLCLDVPSELSTFEAFAKLL 670
            +G MA TSE L  QS  +KQ+C+LFP RR+  +GE+ DG +G YD ICNARLPRGLDPHS+ SEEL+ASLGYM+QLL++VV  +AAP LH SGF  SCSR+WQR SYW  R  S+S  YPLFIPR+N+CS G D SW++  S NFGV SV+S+ K+ LD                +E HQDLQ+GISLLK SV  +T Y YNSL +DVPS LSTFEAFAKLL
Sbjct:  143 MGLMATTSEHLKMQSKAMKQLCRLFPLRRVIKDGEQNDGYNGPYDVICNARLPRGLDPHSVPSEELSASLGYMLQLLSIVVPILAAPVLHISGFGASCSRVWQRSSYWSTR-QSQSKVYPLFIPRKNNCSVGEDNSWTESGSGNFGVQSVDSDNKSVLDSKRSNSFNFSIASSHSMERHQDLQRGISLLKTSVTAITTYYYNSLGMDVPSNLSTFEAFAKLL 363

[Close]

BLAST of CF810600 vs. Vitis vinifera peptide
Match: GSVIVT01008963001 (assembled CDS)

HSP 1 Score: 349.362 bits (895), Expect = 7.279e-97
Identity = 169/223 (75.78%), Postives = 191/223 (85.65%), Query Frame = 2

Query:    2 SLGHMAITSERLHKQSVVIKQICKLFPQRRLNLEGERKDGSSGQYDQICNARLPRGLDPHSISSEELAASLGYMVQLLNLVVHNVAAPALHNSGFAGSCSRIWQRDSYWDARPSSRSNEYPLFIPRQNSCSTGGDTSWSDRSSSNFGVTSVESEKKAHLDXXXXXXXXXXXXXXXXVETHQDLQKGISLLKKSVACVTAYCYNSLCLDVPSELSTFEAFAKLL 670
            +LG MAITSER HKQSVVIKQICKLFPQRR+N++GE+KDGSS  YDQICN RLPR LDPHS+ S+ELAASLGYMVQLLNLVV+N+AAPALHNSGFAGSCSRIWQR+SYW+ RPSSRSNEYPLFIPRQN CST G+ SWS+RSSSNFG+ S+ES++K  L+                VETH+DLQKGISLLKKSVAC+T YCY+SLCLDVP+E STFEAFAKLL
Sbjct:  135 NLGLMAITSERFHKQSVVIKQICKLFPQRRVNIDGEKKDGSSRPYDQICNVRLPRVLDPHSVPSDELAASLGYMVQLLNLVVYNLAAPALHNSGFAGSCSRIWQRESYWNPRPSSRSNEYPLFIPRQNLCSTNGENSWSERSSSNFGIASMESDRKPRLESSGSSSFNYSSASLHSVETHKDLQKGISLLKKSVACLTTYCYSSLCLDVPTEASTFEAFAKLL 357

[Close]

BLAST of CF810600 vs. TAIR peptide
Match: AT4G08540.1 (| Symbols: | DNA-directed RNA polymerase II protein | chr4:5433760-5436326 FORWARD LENGTH=473)

HSP 1 Score: 331.643 bits (849), Expect = 2.265e-91
Identity = 162/224 (72.32%), Postives = 187/224 (83.48%), Query Frame = 2

Query:    2 SLGHMAITSERLHKQSVVIKQICKLFPQRRLNLEGERKDGSSGQYDQICNARLPRGLDPHSISSEELAASLGYMVQLLNLVVHNVAAPALHNSGFAGSCSRIWQRDSYWDARPSSRSNEYPLFIPRQNSCSTGGDTSWSDRSSSNFGVTSVESEKK-AHLDXXXXXXXXXXXXXXXXVETHQDLQKGISLLKKSVACVTAYCYNSLCLDVPSELSTFEAFAKLL 670
            SLGHMAI+SERLHKQSVV+KQICKLFP RR++ +GE ++GS  QYD ICN+RLP GLDPHSI SEELA SLGYMVQLLNLVVHN+AAPALH+SGFAGSCSRIWQRDSYWD R S+RSNEYPLFIPR+N CST  + SW+D++SSNFGV S+ES++K   LD                +E+H+DLQKGI+LLKKSVAC+TAYCYNSLCL+VP E STFEAFAKLL
Sbjct:  135 SLGHMAISSERLHKQSVVVKQICKLFPLRRVSFDGESQNGSVRQYDVICNSRLPSGLDPHSIPSEELAVSLGYMVQLLNLVVHNLAAPALHSSGFAGSCSRIWQRDSYWDGRTSTRSNEYPLFIPRRNYCSTSVENSWTDKNSSNFGVASMESDRKEPRLDSPGSNSFKYSSASPHSIESHRDLQKGIALLKKSVACLTAYCYNSLCLEVPPEASTFEAFAKLL 358

[Close]

BLAST of CF810600 vs. TAIR peptide
Match: AT1G77890.1 (| Symbols: | DNA-directed RNA polymerase II protein | chr1:29292497-29295440 FORWARD LENGTH=460)

HSP 1 Score: 248.44 bits (633), Expect = 2.522e-66
Identity = 129/224 (57.59%), Postives = 164/224 (73.21%), Query Frame = 2

Query:    5 LGHMAITSERLHKQSVVIKQICKLFPQRRLNLEGERKDGSSGQYDQICNARLPRGLDPHSISSEELAASLGYMVQLLNLVVHNVAAPALHNSGFAGSCSRIWQRDSYWDARPSSRSNEYPLFIPRQNSCSTGGDTSWSDRSSSNFGVTSVESEKKAHLD--XXXXXXXXXXXXXXXXVETHQDLQKGISLLKKSVACVTAYCYNSLCLDVPSELSTFEAFAKLL 670
            L ++ +TSERL+KQ++V+KQICKLFP  R+ +EG+ KDGSS QYDQICNA LP+GL+P S+  +ELAASLGYMVQLLNLVVH ++ PALHN GFAGSCSRIW+RDSYW++ PSS SN YPLF+P  +  S    +SW+ R ++NFGVTS++S+     D                  VET ++LQ+GI+ LK+SVA +T Y Y SL L+VPS  STFE FAKLL
Sbjct:  135 LVYIDLTSERLYKQALVMKQICKLFPLSRVTVEGQNKDGSSVQYDQICNALLPQGLNPLSVPPKELAASLGYMVQLLNLVVHKLSVPALHNLGFAGSCSRIWERDSYWNSYPSSPSNGYPLFVPIHDHYSFEEKSSWTGRDTTNFGVTSLKSDGSIEEDYHDLDLDVVSLSSASPHSVETFRNLQQGIAHLKQSVAHLTVYGYRSLSLEVPSGTSTFETFAKLL 358

[Close]

BLAST of CF810600 vs. TAIR peptide
Match: AT1G77890.3 (| Symbols: | DNA-directed RNA polymerase II protein | chr1:29292497-29295440 FORWARD LENGTH=458)

HSP 1 Score: 247.669 bits (631), Expect = 4.302e-66
Identity = 128/219 (58.45%), Postives = 161/219 (73.52%), Query Frame = 2

Query:   20 ITSERLHKQSVVIKQICKLFPQRRLNLEGERKDGSSGQYDQICNARLPRGLDPHSISSEELAASLGYMVQLLNLVVHNVAAPALHNSGFAGSCSRIWQRDSYWDARPSSRSNEYPLFIPRQNSCSTGGDTSWSDRSSSNFGVTSVESEKKAHLD--XXXXXXXXXXXXXXXXVETHQDLQKGISLLKKSVACVTAYCYNSLCLDVPSELSTFEAFAKLL 670
            +TSERL+KQ++V+KQICKLFP  R+ +EG+ KDGSS QYDQICNA LP+GL+P S+  +ELAASLGYMVQLLNLVVH ++ PALHN GFAGSCSRIW+RDSYW++ PSS SN YPLF+P  +  S    +SW+ R ++NFGVTS++S+     D                  VET ++LQ+GI+ LK+SVA +T Y Y SL L+VPS  STFE FAKLL
Sbjct:  138 LTSERLYKQALVMKQICKLFPLSRVTVEGQNKDGSSVQYDQICNALLPQGLNPLSVPPKELAASLGYMVQLLNLVVHKLSVPALHNLGFAGSCSRIWERDSYWNSYPSSPSNGYPLFVPIHDHYSFEEKSSWTGRDTTNFGVTSLKSDGSIEEDYHDLDLDVVSLSSASPHSVETFRNLQQGIAHLKQSVAHLTVYGYRSLSLEVPSGTSTFETFAKLL 356

[Close]

BLAST of CF810600 vs. TAIR peptide
Match: AT1G77890.2 (| Symbols: | DNA-directed RNA polymerase II protein | chr1:29292497-29295440 FORWARD LENGTH=449)

HSP 1 Score: 233.417 bits (594), Expect = 8.396e-62
Identity = 121/210 (57.62%), Postives = 152/210 (72.38%), Query Frame = 2

Query:   47 SVVIKQICKLFPQRRLNLEGERKDGSSGQYDQICNARLPRGLDPHSISSEELAASLGYMVQLLNLVVHNVAAPALHNSGFAGSCSRIWQRDSYWDARPSSRSNEYPLFIPRQNSCSTGGDTSWSDRSSSNFGVTSVESEKKAHLD--XXXXXXXXXXXXXXXXVETHQDLQKGISLLKKSVACVTAYCYNSLCLDVPSELSTFEAFAKLL 670
            ++V+KQICKLFP  R+ +EG+ KDGSS QYDQICNA LP+GL+P S+  +ELAASLGYMVQLLNLVVH ++ PALHN GFAGSCSRIW+RDSYW++ PSS SN YPLF+P  +  S    +SW+ R ++NFGVTS++S+     D                  VET ++LQ+GI+ LK+SVA +T Y Y SL L+VPS  STFE FAKLL
Sbjct:  138 ALVMKQICKLFPLSRVTVEGQNKDGSSVQYDQICNALLPQGLNPLSVPPKELAASLGYMVQLLNLVVHKLSVPALHNLGFAGSCSRIWERDSYWNSYPSSPSNGYPLFVPIHDHYSFEEKSSWTGRDTTNFGVTSLKSDGSIEEDYHDLDLDVVSLSSASPHSVETFRNLQQGIAHLKQSVAHLTVYGYRSLSLEVPSGTSTFETFAKLL 347

The following BLAST results are available for this feature:

BLAST of CF810600 vs. Populus trichocarpa peptide v2.0
BLAST of CF810600 vs. P. persica 1.0 peptide
BLAST of CF810600 vs. TrEMBL
BLAST of CF810600 vs. Vitis vinifera peptide
BLAST of CF810600 vs. TAIR peptide

BLAST of CF810600 vs. Populus trichocarpa peptide v2.0
Analysis Date: 2011-01-18 (BLAST: Vaccinium corymbosum unigene v1 vs Populus trichocarpa v2.0 peptide)
Total hits: 4


Match Name	E-value	Identity
POPTR_0002s09150.4	9.756e-99	78.48	[more]
POPTR_0002s09150.3	9.756e-99	78.48	[more]
POPTR_0002s09150.2	9.756e-99	78.48	[more]
POPTR_0002s09150.1	7.235e-94	68.90	[more]

BLAST of CF810600 vs. P. persica 1.0 peptide
Analysis Date: 2011-01-18 (BLAST: Vaccinium corymbosum unigene v1 vs Ppersica v1.0 peptide)
Total hits: 2


Match Name	E-value	Identity	Description
ppa005055m	3.572e-103	80.72		[more]
ppa005050m	3.572e-103	80.72		[more]

BLAST of CF810600 vs. TrEMBL
Analysis Date: 2011-01-18 (BLAST: Vaccinium corymbosum unigene v1 vs TrEMBL)
Total hits: 10


Match Name	E-value	Identity	Description
B9T6K6\|B9T6K6_RICCO	5.038e-98	79.82	DNA-directed RNA polymerase II, putative OS=Ricinu...	[more]
B9GUI0\|B9GUI0_POPTR	1.241e-96	78.48	Predicted protein OS=Populus trichocarpa GN=POPTRD...	[more]
Q8VYD5\|Q8VYD5_ARATH	3.273e-89	72.32	Putative uncharacterized protein At4g08540 OS=Arab...	[more]
Q8H1E1\|Q8H1E1_ARATH	3.273e-89	72.32	Putative uncharacterized protein At4g08540 OS=Arab...	[more]
Q9M0T0\|Q9M0T0_ARATH	8.654e-74	62.67	Putative uncharacterized protein AT4g08540 OS=Arab...	[more]
D7M8G2\|D7M8G2_ARALY	6.202e-72	64.29	Putative uncharacterized protein OS=Arabidopsis ly...	[more]
B8B4V4\|B8B4V4_ORYSI	3.403e-70	60.81	Putative uncharacterized protein OS=Oryza sativa s...	[more]
Q7XIG6\|Q7XIG6_ORYSJ	9.901e-70	60.36	Os07g0626300 protein OS=Oryza sativa subsp. japoni...	[more]
Q7XIG5\|Q7XIG5_ORYSJ	9.901e-70	60.36	Putative uncharacterized protein OJ1339_F05.121-2 ...	[more]
B9FUB9\|B9FUB9_ORYSJ	9.901e-70	60.36	Putative uncharacterized protein OS=Oryza sativa s...	[more]

BLAST of CF810600 vs. Vitis vinifera peptide
Analysis Date: 2011-01-25 (BLAST: Vaccinium corymbosum unigene v1 vs Vitis vinifera peptide)
Total hits: 1


Match Name	E-value	Identity	Description
GSVIVT01008963001	7.279e-97	75.78	assembled CDS	[more]

BLAST of CF810600 vs. TAIR peptide
Analysis Date: 2011-02-10 (BLAST: Vaccinium corymbosum unigene v1 vs TAIR 10 peptide)
Total hits: 4


Match Name	E-value	Identity	Description
AT4G08540.1	2.265e-91	72.32	\| Symbols: \| DNA-directed RNA polymerase II prote...	[more]
AT1G77890.1	2.522e-66	57.59	\| Symbols: \| DNA-directed RNA polymerase II prote...	[more]
AT1G77890.3	4.302e-66	58.45	\| Symbols: \| DNA-directed RNA polymerase II prote...	[more]
AT1G77890.2	8.396e-62	57.62	\| Symbols: \| DNA-directed RNA polymerase II prote...	[more]

InterPro

Analysis Name: InterProScan analysis for Vaccinium corymbosum unigene v1
Date Performed: 2011-01-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR21297	DNA-DIRECTED RNA POLYMERASE II	coord: 30..223 score: 1.7
None	No IPR available	SEG	seg	seg	coord: 161..176 score

Properties


Property Name	Value
Singlet in analysis	Vaccinium corymbosum unigene v1

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>CF810600 ID=CF810600; Name=CF810600; organism=Vaccinium corymbosum; type=EST; length=671bp
GAGTTTGGGGCATATGGCAATTACCTCTGAGCGTCTTCACAAACAGTCCG
TTGTTATCAAACAGATATGCAAGTTGTTCCCACAACGTCGGTTAAATCTA
GAAGGGGAGAGAAAAGATGGGTCCAGCGGTCAATATGATCAGATTTGCAA
TGCACGCTTACCAAGAGGACTCGACCCGCATTCAATTTCCTCAGAAGAAC
TTGCTGCCTCACTGGGGTACATGGTGCAACTTTTAAATCTTGTTGTGCAC
AATGTTGCTGCTCCTGCACTTCATAACTCGGGCTTTGCGGGTTCGTGCTC
CCGAATATGGCAACGAGACTCCTATTGGGATGCTCGTCCATCTTCCAGAA
GCAATGAATATCCACTATTTATACCACGCCAAAATAGTTGCTCCACTGGC
GGGGATACTTCATGGTCTGATAGAAGCTCAAGTAATTTCGGTGTCACTTC
AGTGGAATCTGAGAAGAAGGCCCACTTAGATTCTTCTCGTAGTAGTAGCT
TCAATTATTCTTCTGCATCGCCACATTCTGTTGAAACTCACCAGGACTTG
CAGAAAGGAATTTCACTGCTCAAAAAAAGTGTGGCATGCGTGACAGCGTA
CTGTTATAACTCATTATGCTTAGATGTTCCCTCTGAGTTATCTACTTTTG
AGGCGTTTGCAAAGCTGCTGN

Annotated Terms

The following terms have been associated with this EST:

Vocabulary: **INTERPRO**
Term	Definition
noIPR	unintegrated