HO054801

EST Overview
NameHO054801
Unique NameHO054801
TypeEST
OrganismVaccinium corymbosum (northern highbush blueberry)
Sequence length309
Unigenes
This EST is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Vaccinium corymbosum unigene v1EST
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
Vaccinium corymbosum unigene v12011-01-18
BLAST: Vaccinium corymbosum unigene v1 vs TrEMBL2011-01-18
InterProScan analysis for Vaccinium corymbosum unigene v12011-01-18
Homology
[Close]
BLAST of HO054801 vs. TrEMBL
Match: B5RZF4|B5RZF4_RALSO (Ppic-type peptidyl-prolyl cis-trans isomerase protein OS=Ralstonia solanacearum GN=RSMK05489 PE=4 SV=1)

HSP 1 Score: 128.257 bits (321), Expect = 2.553e-28
Identity = 59/103 (57.28%), Postives = 80/103 (77.67%), Query Frame = -1 
Query:    1 EEMIREQFNTIISSLGPSEYKARLIQVEDNATAKKIIEQLKTGSDFAQLAAQYSVAANKNNGGELAWVSFKLPAQEGKTQNLPLPVAQAIAELTPGAVTPVPV 309
            +E ++ +++ I++SLG  EYKAR+IQV D+ TA ++I QLK G DFA+LA QYS A NK  GGE+ WVSFK+P +EGKTQN+PLP+A+ I+ L PGAV+  PV
Sbjct:  119 DEQVKARYDAIVASLGDKEYKARVIQVGDDVTASQVIAQLKQGGDFAKLAQQYSTAPNKARGGEMDWVSFKVPLEEGKTQNMPLPLAREISTLQPGAVSAAPV 221
[Close]
BLAST of HO054801 vs. TrEMBL
Match: C6BQ14|C6BQ14_RALP1 (PpiC-type peptidyl-prolyl cis-trans isomerase OS=Ralstonia pickettii (strain 12D) GN=Rpic12D_5054 PE=3 SV=1)

HSP 1 Score: 124.79 bits (312), Expect = 2.823e-27
Identity = 57/103 (55.34%), Postives = 78/103 (75.73%), Query Frame = -1 
Query:    1 EEMIREQFNTIISSLGPSEYKARLIQVEDNATAKKIIEQLKTGSDFAQLAAQYSVAANKNNGGELAWVSFKLPAQEGKTQNLPLPVAQAIAELTPGAVTPVPV 309
            +E ++ +++ I++SLG  EYKAR+IQV D+ TA ++I QLK G DFA+LA QYS A NK  GGE+ WVSFK+P ++GKTQ++PLP+A  I  L PGAV+  PV
Sbjct:  119 DEQVKARYDAIVASLGDKEYKARVIQVGDDVTASQVIAQLKQGGDFAKLAQQYSTAPNKARGGEMDWVSFKVPVEDGKTQSMPLPLAHEITTLQPGAVSAAPV 221
[Close]
BLAST of HO054801 vs. TrEMBL
Match: Q8XPV2|Q8XPV2_RALSO (Putative ppic-type peptidyl-prolyl cis-trans isomerase signal peptide protein OS=Ralstonia solanacearum GN=RSp1534 PE=4 SV=1)

HSP 1 Score: 122.865 bits (307), Expect = 1.073e-26
Identity = 57/103 (55.34%), Postives = 78/103 (75.73%), Query Frame = -1 
Query:    1 EEMIREQFNTIISSLGPSEYKARLIQVEDNATAKKIIEQLKTGSDFAQLAAQYSVAANKNNGGELAWVSFKLPAQEGKTQNLPLPVAQAIAELTPGAVTPVPV 309
            EE ++ +++ I++SLG  EYKAR+IQ+ D+ TA +++ QLK G DFA+LA QYS A NK  GG++ WVSFK+P +EGKTQNLPLP+A+ IA L  GA +  PV
Sbjct:  122 EEQVKARYDAIVASLGDKEYKARVIQLGDDVTAAQVLAQLKQGGDFAKLAQQYSTAPNKVRGGDMDWVSFKVPVEEGKTQNLPLPLAREIAALGTGATSTAPV 224
[Close]
BLAST of HO054801 vs. TrEMBL
Match: Q8XUK7|Q8XUK7_RALSO (Putative peptidyl-prolyl isomerase signal peptide protein OS=Ralstonia solanacearum GN=RSc3181 PE=4 SV=1)

HSP 1 Score: 122.094 bits (305), Expect = 1.830e-26
Identity = 57/103 (55.34%), Postives = 78/103 (75.73%), Query Frame = -1 
Query:    1 EEMIREQFNTIISSLGPSEYKARLIQVEDNATAKKIIEQLKTGSDFAQLAAQYSVAANKNNGGELAWVSFKLPAQEGKTQNLPLPVAQAIAELTPGAVTPVPV 309
            EE ++ +++ I++SLG  EYKAR+IQ+ D+ TA +++ QLK G DFA+LA QYS A NK  GG++ WVSFK+P +EGKTQNLPLP+A+ IA L  GA +  PV
Sbjct:  122 EEQVKARYDAIVASLGDKEYKARVIQLGDDVTAAQVLAQLKQGGDFAKLAQQYSTAPNKVRGGDMDWVSFKVPVEEGKTQNLPLPLAREIAALGIGAASTAPV 224
[Close]
BLAST of HO054801 vs. TrEMBL
Match: B5SBP0|B5SBP0_RALSO (Ppic-type peptidyl-prolyl cis-trans isomerase protein OS=Ralstonia solanacearum GN=RSIPO_03572 PE=4 SV=1)

HSP 1 Score: 122.094 bits (305), Expect = 1.830e-26
Identity = 57/103 (55.34%), Postives = 79/103 (76.70%), Query Frame = -1 
Query:    1 EEMIREQFNTIISSLGPSEYKARLIQVEDNATAKKIIEQLKTGSDFAQLAAQYSVAANKNNGGELAWVSFKLPAQEGKTQNLPLPVAQAIAELTPGAVTPVPV 309
            +E ++ +++ I++SLG  EYKAR+IQ+ D+ TA +++E LK G DFA+LA QYS A NK  GG++ WVSFK+PA+EGKTQNLPLP+A+ IA L  GA +  PV
Sbjct:  119 DEQVKARYDAIVASLGDKEYKARVIQLGDDVTAAQVLELLKQGGDFAKLAQQYSTAPNKVRGGDMDWVSFKVPAEEGKTQNLPLPLAREIAALGIGATSTAPV 221
[Close]
BLAST of HO054801 vs. TrEMBL
Match: B5SAY1|B5SAY1_RALSO (Ppic-type peptidyl-prolyl cis-trans isomerase protein OS=Ralstonia solanacearum GN=RSIPO_03311 PE=4 SV=1)

HSP 1 Score: 122.094 bits (305), Expect = 1.830e-26
Identity = 57/103 (55.34%), Postives = 79/103 (76.70%), Query Frame = -1 
Query:    1 EEMIREQFNTIISSLGPSEYKARLIQVEDNATAKKIIEQLKTGSDFAQLAAQYSVAANKNNGGELAWVSFKLPAQEGKTQNLPLPVAQAIAELTPGAVTPVPV 309
            +E ++ +++ I++SLG  EYKAR+IQ+ D+ TA +++E LK G DFA+LA QYS A NK  GG++ WVSFK+PA+EGKTQNLPLP+A+ IA L  GA +  PV
Sbjct:  109 DEQVKARYDAIVASLGDKEYKARVIQLGDDVTAAQVLELLKQGGDFAKLAQQYSTAPNKVRGGDMDWVSFKVPAEEGKTQNLPLPLAREIAALGIGATSTAPV 211
[Close]
BLAST of HO054801 vs. TrEMBL
Match: A3RUB1|A3RUB1_RALSO (Peptidyl-prolyl cis-trans isomerase OS=Ralstonia solanacearum UW551 GN=RRSL_02076 PE=4 SV=1)

HSP 1 Score: 122.094 bits (305), Expect = 1.830e-26
Identity = 57/103 (55.34%), Postives = 79/103 (76.70%), Query Frame = -1 
Query:    1 EEMIREQFNTIISSLGPSEYKARLIQVEDNATAKKIIEQLKTGSDFAQLAAQYSVAANKNNGGELAWVSFKLPAQEGKTQNLPLPVAQAIAELTPGAVTPVPV 309
            +E ++ +++ I++SLG  EYKAR+IQ+ D+ TA +++E LK G DFA+LA QYS A NK  GG++ WVSFK+PA+EGKTQNLPLP+A+ IA L  GA +  PV
Sbjct:  122 DEQVKARYDAIVASLGDKEYKARVIQLGDDVTAAQVLELLKQGGDFAKLAQQYSTAPNKVRGGDMDWVSFKVPAEEGKTQNLPLPLAREIAALGIGATSTAPV 224
[Close]
BLAST of HO054801 vs. TrEMBL
Match: A3RNP4|A3RNP4_RALSO (Putative uncharacterized protein OS=Ralstonia solanacearum UW551 GN=RRSL_04650 PE=4 SV=1)

HSP 1 Score: 122.094 bits (305), Expect = 1.830e-26
Identity = 57/103 (55.34%), Postives = 79/103 (76.70%), Query Frame = -1 
Query:    1 EEMIREQFNTIISSLGPSEYKARLIQVEDNATAKKIIEQLKTGSDFAQLAAQYSVAANKNNGGELAWVSFKLPAQEGKTQNLPLPVAQAIAELTPGAVTPVPV 309
            +E ++ +++ I++SLG  EYKAR+IQ+ D+ TA +++E LK G DFA+LA QYS A NK  GG++ WVSFK+PA+EGKTQNLPLP+A+ IA L  GA +  PV
Sbjct:  119 DEQVKARYDAIVASLGDKEYKARVIQLGDDVTAAQVLELLKQGGDFAKLAQQYSTAPNKVRGGDMDWVSFKVPAEEGKTQNLPLPLAREIAALGIGATSTAPV 221
[Close]
BLAST of HO054801 vs. TrEMBL
Match: B5S3H4|B5S3H4_RALSO (Ppic-type peptidyl-prolyl cis-trans isomerase protein OS=Ralstonia solanacearum GN=RSMK03450 PE=4 SV=1)

HSP 1 Score: 119.783 bits (299), Expect = 9.081e-26
Identity = 56/103 (54.37%), Postives = 78/103 (75.73%), Query Frame = -1 
Query:    1 EEMIREQFNTIISSLGPSEYKARLIQVEDNATAKKIIEQLKTGSDFAQLAAQYSVAANKNNGGELAWVSFKLPAQEGKTQNLPLPVAQAIAELTPGAVTPVPV 309
            +E ++ +++ I++SLG  EYKAR+IQ+ D+ TA +++  LK G DFA+LA QYS A NK  GG++ WVSFK+PA+EGKTQNLPLP+A+ IA L  GA +  PV
Sbjct:  119 DEQVKARYDAIVASLGDKEYKARVIQLGDDVTAAQVLALLKQGGDFAKLAQQYSTAPNKVRGGDMDWVSFKVPAEEGKTQNLPLPLAREIAALGIGATSTAPV 221
[Close]
BLAST of HO054801 vs. TrEMBL
Match: B5RZY3|B5RZY3_RALSO (Ppic-type peptidyl-prolyl cis-trans isomerase protein OS=Ralstonia solanacearum GN=RSMK05705 PE=4 SV=1)

HSP 1 Score: 119.783 bits (299), Expect = 9.081e-26
Identity = 56/103 (54.37%), Postives = 78/103 (75.73%), Query Frame = -1 
Query:    1 EEMIREQFNTIISSLGPSEYKARLIQVEDNATAKKIIEQLKTGSDFAQLAAQYSVAANKNNGGELAWVSFKLPAQEGKTQNLPLPVAQAIAELTPGAVTPVPV 309
            +E ++ +++ I++SLG  EYKAR+IQ+ D+ TA +++  LK G DFA+LA QYS A NK  GG++ WVSFK+PA+EGKTQNLPLP+A+ IA L  GA +  PV
Sbjct:  109 DEQVKARYDAIVASLGDKEYKARVIQLGDDVTAAQVLALLKQGGDFAKLAQQYSTAPNKVRGGDMDWVSFKVPAEEGKTQNLPLPLAREIAALGIGATSTAPV 211
The following BLAST results are available for this feature:
BLAST of HO054801 vs. TrEMBL
Analysis Date: 2011-01-18 (BLAST: Vaccinium corymbosum unigene v1 vs TrEMBL)
Total hits: 10
Match NameE-valueIdentityDescription
B5RZF4|B5RZF4_RALSO2.553e-2857.28Ppic-type peptidyl-prolyl cis-trans isomerase prot... [more]
C6BQ14|C6BQ14_RALP12.823e-2755.34PpiC-type peptidyl-prolyl cis-trans isomerase OS=R... [more]
Q8XPV2|Q8XPV2_RALSO1.073e-2655.34Putative ppic-type peptidyl-prolyl cis-trans isome... [more]
Q8XUK7|Q8XUK7_RALSO1.830e-2655.34Putative peptidyl-prolyl isomerase signal peptide ... [more]
B5SBP0|B5SBP0_RALSO1.830e-2655.34Ppic-type peptidyl-prolyl cis-trans isomerase prot... [more]
B5SAY1|B5SAY1_RALSO1.830e-2655.34Ppic-type peptidyl-prolyl cis-trans isomerase prot... [more]
A3RUB1|A3RUB1_RALSO1.830e-2655.34Peptidyl-prolyl cis-trans isomerase OS=Ralstonia s... [more]
A3RNP4|A3RNP4_RALSO1.830e-2655.34Putative uncharacterized protein OS=Ralstonia sola... [more]
B5S3H4|B5S3H4_RALSO9.081e-2654.37Ppic-type peptidyl-prolyl cis-trans isomerase prot... [more]
B5RZY3|B5RZY3_RALSO9.081e-2654.37Ppic-type peptidyl-prolyl cis-trans isomerase prot... [more]
back to top
InterPro
Analysis Name: InterProScan analysis for Vaccinium corymbosum unigene v1
Date Performed: 2011-01-18
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000297Peptidyl-prolyl cis-trans isomerase, PpiC-typePFAMPF00639Rotamasecoord: 30..99
score: 2.4
IPR000297Peptidyl-prolyl cis-trans isomerase, PpiC-typePROFILEPS50198PPIC_PPIASE_2coord: 17..103
score: 15
NoneNo IPR availableGENE3D3.10.50.40no descriptioncoord: 16..100
score: 4.6
NoneNo IPR availableSUPERFAMILY54534FKBP-likecoord: 17..103
score: 1.6

Properties
Property NameValue
Singlet in analysisVaccinium corymbosum unigene v1
Sequences
The following sequences are available for this feature:

EST sequence

>HO054801 ID=HO054801; Name=HO054801; organism=Vaccinium corymbosum; type=EST; length=309bp
CACTGGAACAGGCGTGACTGCGCCAGGTGTCAATTCAGCGATGGCTTGTG
CAACGGGAAGAGGCAGATTTTGGGTCTTGCCTTCTTGAGCGGGCAGCTTG
AAGCTTACCCATGCCAATTCGCCGCCATTGTTTTTATTCGCTGCTACGCT
GTATTGCGCGGCAAGTTGCGCGAAGTCACTGCCAGTCTTGAGCTGTTCAA
TGATCTTCTTGGCCGTCGCATTATCTTCCACCTGAATCAACCGGGCCTTG
TATTCACTGGGACCGAGACTGGAAATGATTGTGTTGAACTGCTCGCGGAT
CATTTCCTC
back to top
Annotated Terms
The following terms have been associated with this EST:
Vocabulary: Molecular Function
TermDefinition
GO:0016853isomerase activity
Vocabulary: INTERPRO
TermDefinition
IPR000297PPIase_PpiC
noIPRunintegrated