CF811175 | GDV

EST Overview


Name	CF811175
Unique Name	CF811175
Type	EST
Organism	Vaccinium corymbosum (northern highbush blueberry)
Sequence length	601

Libraries


Library Name	Type
LIBEST_014531 cDNA non acclimated Bluecrop library	cdna_library

Unigenes

This EST is part of the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
	Vaccinium corymbosum unigene v1	EST

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
Vaccinium corymbosum unigene v1	2011-01-18
BLAST: Vaccinium corymbosum unigene v1 vs Populus trichocarpa v2.0 peptide	2011-01-18
BLAST: Vaccinium corymbosum unigene v1 vs Ppersica v1.0 peptide	2011-01-18
BLAST: Vaccinium corymbosum unigene v1 vs Swissprot	2011-01-18
BLAST: Vaccinium corymbosum unigene v1 vs TrEMBL	2011-01-18
BLAST: Vaccinium corymbosum unigene v1 vs Vitis vinifera peptide	2011-01-25
BLAST: Vaccinium corymbosum unigene v1 vs TAIR 10 peptide	2011-02-10
InterProScan analysis for Vaccinium corymbosum unigene v1	2011-01-18

Homology

[Close]

BLAST of CF811175 vs. DB:swissprot:display
Match: GLNB_NOSP7 (Nitrogen regulatory protein P-II OS=Nostoc punctiforme (strain ATCC 29133 / PCC 73102) GN=glnB PE=3 SV=1)

HSP 1 Score: 102.834 bits (255), Expect = 1.374e-21
Identity = 54/91 (59.34%), Postives = 68/91 (74.73%), Query Frame = 2

Query:  176 KVEAILRPWRIPQVSSALLKMGIRGVTVSDVRRFGAQGGLTERQAGSEFSEDKFLAKVKVEIVVSKEQVEAVIDKIIEVTRTGEIGDGKFF 448
            KVEAI+RP+++ +V  AL+  GI G+TVS+VR FG Q G TER  GSE++ + FL K+KVEIVV   QV+ V+DKII   RTGEIGDGK F
Sbjct:    3 KVEAIIRPFKLDEVKIALVNAGIVGMTVSEVRGFGRQKGQTERYRGSEYTVE-FLQKLKVEIVVDDNQVDMVVDKIIAAARTGEIGDGKIF 92

[Close]

BLAST of CF811175 vs. DB:swissprot:display
Match: GLNB_FREDI (Nitrogen regulatory protein P-II OS=Fremyella diplosiphon GN=glnB PE=3 SV=1)

HSP 1 Score: 102.834 bits (255), Expect = 1.374e-21
Identity = 54/91 (59.34%), Postives = 68/91 (74.73%), Query Frame = 2

Query:  176 KVEAILRPWRIPQVSSALLKMGIRGVTVSDVRRFGAQGGLTERQAGSEFSEDKFLAKVKVEIVVSKEQVEAVIDKIIEVTRTGEIGDGKFF 448
            KVEAI+RP+++ +V  AL+  GI G+TVS+VR FG Q G TER  GSE++ + FL K+KVEIVV   QV+ V+DKII   RTGEIGDGK F
Sbjct:    3 KVEAIIRPFKLDEVKIALVNAGIVGMTVSEVRGFGRQKGQTERYRGSEYTVE-FLQKLKVEIVVEDNQVDMVVDKIIAAARTGEIGDGKIF 92

[Close]

BLAST of CF811175 vs. DB:swissprot:display
Match: GLNB_SYNY3 (Nitrogen regulatory protein P-II OS=Synechocystis sp. (strain PCC 6803) GN=glnB PE=1 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 3.062e-21
Identity = 51/91 (56.04%), Postives = 69/91 (75.82%), Query Frame = 2

Query:  176 KVEAILRPWRIPQVSSALLKMGIRGVTVSDVRRFGAQGGLTERQAGSEFSEDKFLAKVKVEIVVSKEQVEAVIDKIIEVTRTGEIGDGKFF 448
            KVEAI+RP+++ +V  AL+  GI G+TVS+VR FG Q G TER  GSE++ + FL K+K+EIVV + QV+ V+DK++   RTGEIGDGK F
Sbjct:    3 KVEAIIRPFKLDEVKIALVNAGIVGMTVSEVRGFGRQKGQTERYRGSEYTVE-FLQKLKIEIVVDEGQVDMVVDKLVSAARTGEIGDGKIF 92

[Close]

BLAST of CF811175 vs. DB:swissprot:display
Match: GLNB_SYNP6 (Nitrogen regulatory protein P-II OS=Synechococcus sp. (strain ATCC 27144 / PCC 6301 / SAUG 1402/1) GN=glnB PE=1 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 3.998e-21
Identity = 52/91 (57.14%), Postives = 68/91 (74.73%), Query Frame = 2

Query:  176 KVEAILRPWRIPQVSSALLKMGIRGVTVSDVRRFGAQGGLTERQAGSEFSEDKFLAKVKVEIVVSKEQVEAVIDKIIEVTRTGEIGDGKFF 448
            K+EAI+RP+++ +V  AL+  GI G+TVS+VR FG Q G TER  GSE++ + FL K+K+EIVV   QV+ VIDKI+   RTGEIGDGK F
Sbjct:    3 KIEAIIRPFKLDEVKIALVNAGIVGMTVSEVRGFGRQKGQTERYRGSEYTVE-FLQKLKLEIVVEDAQVDTVIDKIVAAARTGEIGDGKIF 92

[Close]

BLAST of CF811175 vs. DB:swissprot:display
Match: GLNB_SYNE7 (Nitrogen regulatory protein P-II OS=Synechococcus elongatus (strain PCC 7942) GN=glnB PE=1 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 3.998e-21
Identity = 52/91 (57.14%), Postives = 68/91 (74.73%), Query Frame = 2

Query:  176 KVEAILRPWRIPQVSSALLKMGIRGVTVSDVRRFGAQGGLTERQAGSEFSEDKFLAKVKVEIVVSKEQVEAVIDKIIEVTRTGEIGDGKFF 448
            K+EAI+RP+++ +V  AL+  GI G+TVS+VR FG Q G TER  GSE++ + FL K+K+EIVV   QV+ VIDKI+   RTGEIGDGK F
Sbjct:    3 KIEAIIRPFKLDEVKIALVNAGIVGMTVSEVRGFGRQKGQTERYRGSEYTVE-FLQKLKLEIVVEDAQVDTVIDKIVAAARTGEIGDGKIF 92

[Close]

BLAST of CF811175 vs. DB:swissprot:display
Match: GLNB_PORYE (Nitrogen regulatory protein P-II OS=Porphyra yezoensis GN=glnB PE=3 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 4.888e-19
Identity = 46/91 (50.55%), Postives = 68/91 (74.73%), Query Frame = 2

Query:  176 KVEAILRPWRIPQVSSALLKMGIRGVTVSDVRRFGAQGGLTERQAGSEFSEDKFLAKVKVEIVVSKEQVEAVIDKIIEVTRTGEIGDGKFF 448
            K+EAI+RP+++ +V  AL+K GI G+TV  V  FG Q G TER  GSE+S D  + K+K+EI++S ++VE +++ II+ ++TGEIGDGK F
Sbjct:    3 KIEAIIRPFKLNEVKLALVKEGIGGMTVIKVSGFGRQKGQTERYKGSEYSID-IIDKIKIEIIISDDKVEKIVETIIKASKTGEIGDGKIF 92

[Close]

BLAST of CF811175 vs. DB:swissprot:display
Match: GLNB_PORPU (Nitrogen regulatory protein P-II OS=Porphyra purpurea GN=glnB PE=3 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 7.058e-18
Identity = 46/91 (50.55%), Postives = 66/91 (72.53%), Query Frame = 2

Query:  176 KVEAILRPWRIPQVSSALLKMGIRGVTVSDVRRFGAQGGLTERQAGSEFSEDKFLAKVKVEIVVSKEQVEAVIDKIIEVTRTGEIGDGKFF 448
            K+EAI+RP+++ +V  AL+K GI G+TV  V  FG Q G TER  GSE+S D  + K+K+EI+VS ++V ++ + II+  +TGEIGDGK F
Sbjct:    3 KIEAIIRPFKLNEVKLALVKGGIGGMTVVKVSGFGRQKGQTERYKGSEYSID-IIDKIKIEIIVSDDKVNSITEIIIKTAKTGEIGDGKIF 92

[Close]

BLAST of CF811175 vs. DB:swissprot:display
Match: GLNB_AQUAE (Nitrogen regulatory protein P-II OS=Aquifex aeolicus GN=glnB PE=1 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 7.058e-18
Identity = 43/91 (47.25%), Postives = 67/91 (73.63%), Query Frame = 2

Query:  176 KVEAILRPWRIPQVSSALLKMGIRGVTVSDVRRFGAQGGLTERQAGSEFSEDKFLAKVKVEIVVSKEQVEAVIDKIIEVTRTGEIGDGKFF 448
            K+EAI++P+++ +V  AL+++GI G+TV++V+ FG Q G TE   G+E+  D FL KVK+E+VV  E VE V++ I++  +TG +GDGK F
Sbjct:    3 KIEAIIKPFKLDEVKDALVEIGIGGMTVTEVKGFGQQKGHTEIYRGTEYVID-FLPKVKIEVVVRDEDVEKVVETIVKTAQTGRVGDGKIF 92

[Close]

BLAST of CF811175 vs. DB:swissprot:display
Match: GLNB_PASMU (Nitrogen regulatory protein P-II OS=Pasteurella multocida GN=glnB PE=3 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 9.218e-18
Identity = 46/91 (50.55%), Postives = 66/91 (72.53%), Query Frame = 2

Query:  176 KVEAILRPWRIPQVSSALLKMGIRGVTVSDVRRFGAQGGLTERQAGSEFSEDKFLAKVKVEIVVSKEQVEAVIDKIIEVTRTGEIGDGKFF 448
            K+EAI++P+++  V  +L  +GI G+TV++VR FG Q G TE   G+E+  D FL KVK+EIVV+ EQV+  I+ I+E  +TG+IGDGK F
Sbjct:    3 KIEAIIKPFKLDDVRESLSDVGITGMTVTEVRGFGRQKGHTELYRGAEYMVD-FLPKVKMEIVVTDEQVDQCIEAIMETAQTGKIGDGKIF 92

[Close]

BLAST of CF811175 vs. DB:swissprot:display
Match: GLNB_RHIME (Nitrogen regulatory protein P-II OS=Rhizobium meliloti GN=glnB PE=3 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 3.503e-17
Identity = 43/91 (47.25%), Postives = 65/91 (71.43%), Query Frame = 2

Query:  176 KVEAILRPWRIPQVSSALLKMGIRGVTVSDVRRFGAQGGLTERQAGSEFSEDKFLAKVKVEIVVSKEQVEAVIDKIIEVTRTGEIGDGKFF 448
            K+EAI++P+++ +V  AL ++G++G+TV++ + FG Q G TE   G+E+  D FL KVKVE+V++ E  EAVI+ I    +TG IGDGK F
Sbjct:    3 KIEAIIKPFKLDEVKEALQEVGLQGITVTEAKGFGRQKGHTELYRGAEYVVD-FLPKVKVEVVLADENAEAVIEAIRNAAQTGRIGDGKIF 92

[Close]

BLAST of CF811175 vs. Populus trichocarpa peptide v2.0
Match: POPTR_0002s19200.1 ()

HSP 1 Score: 171.785 bits (434), Expect = 2.856e-43
Identity = 87/116 (75.00%), Postives = 99/116 (85.34%), Query Frame = 2

Query:  107 NASLLPIIRAQGS--PDYFPDANFYKVEAILRPWRIPQVSSALLKMGIRGVTVSDVRRFGAQGGLTERQAGSEFSEDKFLAKVKVEIVVSKEQVEAVIDKIIEVTRTGEIGDGKFF 448
            NAS++P IRAQ S  P+Y PDA FYK+EAILRPWR+ QVSSALLK+GIRGVTVSDVR FGAQGG  ER  GSEFSEDKF+AKVK+EIVVSK+QVEAVI+K+ +   TGEIGDGK F
Sbjct:   53 NASIIPTIRAQSSSVPEYIPDAKFYKIEAILRPWRVSQVSSALLKIGIRGVTVSDVRGFGAQGGSKERHGGSEFSEDKFVAKVKLEIVVSKDQVEAVIEKVKDEAWTGEIGDGKIF 168

[Close]

BLAST of CF811175 vs. P. persica 1.0 peptide
Match: ppa011791m ()

HSP 1 Score: 192.971 bits (489), Expect = 8.480e-50
Identity = 100/149 (67.11%), Postives = 115/149 (77.18%), Query Frame = 2

Query:    2 NDFHLVGSTSIPASSRKFRHSQSXXXXXXXXXXXXNASLLPIIRAQGSPDYFPDANFYKVEAILRPWRIPQVSSALLKMGIRGVTVSDVRRFGAQGGLTERQAGSEFSEDKFLAKVKVEIVVSKEQVEAVIDKIIEVTRTGEIGDGKFF 448
            N+  L+ S+SI    R+FR S              NAS+LP+IRAQ SPDY PD+ FYKVEAILRPWR+ QVSSALLK+GIRGVTVSDVR FGAQGG TER  GSEF+ED F+AKVK+EIVVSK+QVEAV+DKIIE  +TGEIGDGK F
Sbjct:   18 NELPLIDSSSIRTKLREFRFSH----FNVTLKHARNASVLPVIRAQSSPDYVPDSKFYKVEAILRPWRVSQVSSALLKIGIRGVTVSDVRGFGAQGGSTERHGGSEFTEDNFVAKVKMEIVVSKDQVEAVVDKIIEAAKTGEIGDGKIF 162

[Close]

BLAST of CF811175 vs. TrEMBL
Match: D7U2N2|D7U2N2_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_5.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00028181001 PE=4 SV=1)

HSP 1 Score: 192.586 bits (488), Expect = 1.845e-47
Identity = 98/114 (85.96%), Postives = 103/114 (90.35%), Query Frame = 2

Query:  107 NASLLPIIRAQGSPDYFPDANFYKVEAILRPWRIPQVSSALLKMGIRGVTVSDVRRFGAQGGLTERQAGSEFSEDKFLAKVKVEIVVSKEQVEAVIDKIIEVTRTGEIGDGKFF 448
            N S+LPI+RAQ SPDY PDA FYKVEAILRPWRI QVSSALLKMGIRGVTVSDVR FGAQGG  ERQAGSEFSEDKF+AKVK+EIVVSK+QVEAVIDKI EV RTGEIGDGK F
Sbjct:   49 NGSVLPIVRAQSSPDYTPDAQFYKVEAILRPWRIQQVSSALLKMGIRGVTVSDVRGFGAQGGSPERQAGSEFSEDKFVAKVKMEIVVSKDQVEAVIDKISEVARTGEIGDGKIF 162

[Close]

BLAST of CF811175 vs. TrEMBL
Match: A8TU50|A8TU50_PAESU (PII protein OS=Paeonia suffruticosa PE=2 SV=1)

HSP 1 Score: 190.66 bits (483), Expect = 7.010e-47
Identity = 106/151 (70.20%), Postives = 116/151 (76.82%), Query Frame = 2

Query:    5 DFHLVGSTSIPASSRKFRHSQSXXXXXXXXXXXXNASLLPIIRAQGSP---DYFPDANFYKVEAILRPWRIPQVSSALLKMGIRGVTVSDVRRFGAQGGLTERQAGSEFSEDKFLAKVKVEIVVSKEQVEAVIDKIIEVTRTGEIGDGKFF 448
            DF LV STSI +     + SQ             NAS+ PI+RAQ SP   DY PDA FYKVEAILRPWR+PQVSSALLKMGIRGVTVSDVR FGAQGGL ERQAGSEFSEDKF+AKVK+EIVV+K+QVE VI+KIIE  RTGEIGDGK F
Sbjct:   19 DFPLVDSTSICSRFGDTQFSQCNVRLKHSN----NASMYPIVRAQKSPGMHDYDPDAKFYKVEAILRPWRVPQVSSALLKMGIRGVTVSDVRGFGAQGGLAERQAGSEFSEDKFVAKVKMEIVVAKDQVEVVIEKIIEEARTGEIGDGKIF 165

[Close]

BLAST of CF811175 vs. TrEMBL
Match: Q6T2D2|Q6T2D2_SOLLC (PII-like protein OS=Solanum lycopersicum GN=GLB1 PE=2 SV=1)

HSP 1 Score: 186.422 bits (472), Expect = 1.322e-45
Identity = 96/114 (84.21%), Postives = 100/114 (87.72%), Query Frame = 2

Query:  107 NASLLPIIRAQGSPDYFPDANFYKVEAILRPWRIPQVSSALLKMGIRGVTVSDVRRFGAQGGLTERQAGSEFSEDKFLAKVKVEIVVSKEQVEAVIDKIIEVTRTGEIGDGKFF 448
            NA   PIIRAQ SPD+ PDA FYKVEAILRPWRI QVSSALLKMGIRGVTVSDVR FGAQGGLTERQAGSEFSED F+AKVK+EIVVSK+QVE VI KIIE  RTGEIGDGK F
Sbjct:   50 NAPSFPIIRAQNSPDFVPDAKFYKVEAILRPWRIQQVSSALLKMGIRGVTVSDVRGFGAQGGLTERQAGSEFSEDTFVAKVKMEIVVSKDQVEGVIAKIIEEARTGEIGDGKIF 163

[Close]

BLAST of CF811175 vs. TrEMBL
Match: B9RN90|B9RN90_RICCO (Nitrogen regulatory protein P-II, putative OS=Ricinus communis GN=RCOM_1345520 PE=4 SV=1)

HSP 1 Score: 183.726 bits (465), Expect = 8.569e-45
Identity = 90/114 (78.95%), Postives = 100/114 (87.72%), Query Frame = 2

Query:  110 ASLLPIIRAQGSPDYFPDANFYKVEAILRPWRIPQVSSALLKMGIRGVTVSDVRRFGAQGGLTERQAGSEFSEDKFLAKVKVEIVVSKEQVEAVIDKIIEVTRTGEIGDGKFFC 451
            A ++P+I AQ SPDY PDA FYKVEAILRPWR+  VSSALLK+GIRGVTVSDVR FGAQGG TERQ GSEFSEDKF+AKVK+EIVVSK+Q+E VI+KIIE  RTGEIGDGK FC
Sbjct:   52 APVVPVINAQSSPDYIPDAKFYKVEAILRPWRVSHVSSALLKIGIRGVTVSDVRGFGAQGGSTERQGGSEFSEDKFVAKVKMEIVVSKDQIEDVIEKIIEEARTGEIGDGKIFC 165

[Close]

BLAST of CF811175 vs. TrEMBL
Match: Q9ZST5|Q9ZST5_RICCO (PII protein (Fragment) OS=Ricinus communis PE=2 SV=1)

HSP 1 Score: 182.57 bits (462), Expect = 1.909e-44
Identity = 91/113 (80.53%), Postives = 100/113 (88.50%), Query Frame = 2

Query:  110 ASLLPIIRAQGSPDYFPDANFYKVEAILRPWRIPQVSSALLKMGIRGVTVSDVRRFGAQGGLTERQAGSEFSEDKFLAKVKVEIVVSKEQVEAVIDKIIEVTRTGEIGDGKFF 448
            A ++P+I AQ SPDY PDA FYKVEAILRPWR+ QVSSALLK+GIRGVTVSDVR FGAQGG TERQ GSEFSEDKF+AKVK+EIVVSK+QVE VI+KIIE  RTGEIGDGK F
Sbjct:   52 APVVPVINAQSSPDYIPDAKFYKVEAILRPWRVSQVSSALLKIGIRGVTVSDVRGFGAQGGSTERQGGSEFSEDKFVAKVKMEIVVSKDQVEDVIEKIIEEARTGEIGDGKIF 164

[Close]

BLAST of CF811175 vs. TrEMBL
Match: Q9ARI4|Q9ARI4_MEDSA (PII protein OS=Medicago sativa GN=GLNB PE=2 SV=1)

HSP 1 Score: 179.874 bits (455), Expect = 1.237e-43
Identity = 90/114 (78.95%), Postives = 99/114 (86.84%), Query Frame = 2

Query:  107 NASLLPIIRAQGSPDYFPDANFYKVEAILRPWRIPQVSSALLKMGIRGVTVSDVRRFGAQGGLTERQAGSEFSEDKFLAKVKVEIVVSKEQVEAVIDKIIEVTRTGEIGDGKFF 448
            NAS+LP IRAQ  PDY P++ FYKVEAILRPWRIPQVSS LLKMGIRGVTVSDV+ FGAQGG  ERQ GSEFSED F+AKVK+EIVV K+QVEAVI+KI+E  RTGEIGDGK F
Sbjct:   49 NASVLPKIRAQNLPDYVPESKFYKVEAILRPWRIPQVSSGLLKMGIRGVTVSDVKGFGAQGGSKERQGGSEFSEDNFVAKVKMEIVVRKDQVEAVINKIMETARTGEIGDGKIF 162

[Close]

BLAST of CF811175 vs. TrEMBL
Match: C6TCD9|C6TCD9_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1)

HSP 1 Score: 179.489 bits (454), Expect = 1.616e-43
Identity = 89/114 (78.07%), Postives = 98/114 (85.96%), Query Frame = 2

Query:  107 NASLLPIIRAQGSPDYFPDANFYKVEAILRPWRIPQVSSALLKMGIRGVTVSDVRRFGAQGGLTERQAGSEFSEDKFLAKVKVEIVVSKEQVEAVIDKIIEVTRTGEIGDGKFF 448
            N ++LP IRAQ  PDY P + FYKVEAILRPWR+PQVS+ALLKMGIRGVTVSDVR FGAQGG  ERQ GSEFSED F+AKVK+E+VV K+QVEAVIDKIIE  RTGEIGDGK F
Sbjct:   49 NGTILPQIRAQNLPDYVPKSEFYKVEAILRPWRVPQVSAALLKMGIRGVTVSDVRGFGAQGGSKERQGGSEFSEDNFVAKVKMEVVVRKDQVEAVIDKIIEEARTGEIGDGKIF 162

[Close]

BLAST of CF811175 vs. TrEMBL
Match: Q9ZST4|Q9ZST4_ARATH (At4g01900 OS=Arabidopsis thaliana GN=AT4g01900 PE=1 SV=1)

HSP 1 Score: 176.407 bits (446), Expect = 1.368e-42
Identity = 90/132 (68.18%), Postives = 103/132 (78.03%), Query Frame = 2

Query:   53 FRHSQSXXXXXXXXXXXXNASLLPIIRAQGSPDYFPDANFYKVEAILRPWRIPQVSSALLKMGIRGVTVSDVRRFGAQGGLTERQAGSEFSEDKFLAKVKVEIVVSKEQVEAVIDKIIEVTRTGEIGDGKFF 448
            FRHS+             N+ +LP++ AQ S DY PD+ FYKVEAI+RPWRI QVSSALLK+GIRGVTVSDVR FGAQGG TER  GSEFSEDKF+AKVK+EIVV K+QVE+VI+ IIE  RTGEIGDGK F
Sbjct:   35 FRHSRPSCLDLVTKSPSNNSRVLPVVSAQISSDYIPDSKFYKVEAIVRPWRIQQVSSALLKIGIRGVTVSDVRGFGAQGGSTERHGGSEFSEDKFVAKVKMEIVVKKDQVESVINTIIEGARTGEIGDGKIF 166

[Close]

BLAST of CF811175 vs. TrEMBL
Match: D7M475|D7M475_ARALY (Putative uncharacterized protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_490384 PE=4 SV=1)

HSP 1 Score: 174.481 bits (441), Expect = 5.198e-42
Identity = 87/132 (65.91%), Postives = 102/132 (77.27%), Query Frame = 2

Query:   53 FRHSQSXXXXXXXXXXXXNASLLPIIRAQGSPDYFPDANFYKVEAILRPWRIPQVSSALLKMGIRGVTVSDVRRFGAQGGLTERQAGSEFSEDKFLAKVKVEIVVSKEQVEAVIDKIIEVTRTGEIGDGKFF 448
            FRHS+             N  +LP++RAQ S DY PD+ FYKVEAI+RPW + +VSSALLK+GIRGVTVSDVR FGAQGG TER  GSEFSEDKF+AKVK+EIVV K+QVE+VI+ II+  RTGEIGDGK F
Sbjct:   35 FRHSRPSCLDLVTKSPSHNTRVLPVVRAQSSSDYIPDSKFYKVEAIVRPWSLQKVSSALLKIGIRGVTVSDVRGFGAQGGSTERHGGSEFSEDKFIAKVKMEIVVKKDQVESVINTIIDGARTGEIGDGKIF 166

[Close]

BLAST of CF811175 vs. TrEMBL
Match: C6SY44|C6SY44_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1)

HSP 1 Score: 173.326 bits (438), Expect = 1.158e-41
Identity = 88/115 (76.52%), Postives = 98/115 (85.22%), Query Frame = 2

Query:  107 NASLLPIIRAQGS-PDYFPDANFYKVEAILRPWRIPQVSSALLKMGIRGVTVSDVRRFGAQGGLTERQAGSEFSEDKFLAKVKVEIVVSKEQVEAVIDKIIEVTRTGEIGDGKFF 448
            N ++LP IRAQ   PDY P + FYKVEAILRPWR+PQVSSA+LKMGIRGVTVSDV+ FG+QGG  ERQ GSEFSED F+AKVK+EIVV K+QVEAVIDKIIE  RTGEIGDGK F
Sbjct:   49 NGTILPQIRAQNVLPDYVPKSEFYKVEAILRPWRVPQVSSAMLKMGIRGVTVSDVKGFGSQGGSKERQGGSEFSEDNFVAKVKMEIVVRKDQVEAVIDKIIEEARTGEIGDGKIF 163

[Close]

BLAST of CF811175 vs. Vitis vinifera peptide
Match: GSVIVT01028181001 (assembled CDS)

HSP 1 Score: 192.586 bits (488), Expect = 9.478e-50
Identity = 98/114 (85.96%), Postives = 103/114 (90.35%), Query Frame = 2

Query:  107 NASLLPIIRAQGSPDYFPDANFYKVEAILRPWRIPQVSSALLKMGIRGVTVSDVRRFGAQGGLTERQAGSEFSEDKFLAKVKVEIVVSKEQVEAVIDKIIEVTRTGEIGDGKFF 448
            N S+LPI+RAQ SPDY PDA FYKVEAILRPWRI QVSSALLKMGIRGVTVSDVR FGAQGG  ERQAGSEFSEDKF+AKVK+EIVVSK+QVEAVIDKI EV RTGEIGDGK F
Sbjct:   49 NGSVLPIVRAQSSPDYTPDAQFYKVEAILRPWRIQQVSSALLKMGIRGVTVSDVRGFGAQGGSPERQAGSEFSEDKFVAKVKMEIVVSKDQVEAVIDKISEVARTGEIGDGKIF 162

[Close]

BLAST of CF811175 vs. Vitis vinifera peptide
Match: GSVIVT01037028001 (assembled CDS)

HSP 1 Score: 124.02 bits (310), Expect = 4.140e-29
Identity = 63/72 (87.50%), Postives = 66/72 (91.67%), Query Frame = 2

Query:  236 MGIRGVTVSDVRRFGAQGGLTERQAGSEFSEDKFLAKVKVEIVVSKEQVEAVIDKIIEVTRTGEIGDGKFFC 451
            MGIRGVTVSDVR FGAQGG  ERQAGSEFSEDKF+AKVK+EIVVSK+QVEAVIDKI EV RTGEIGDGK FC
Sbjct:    1 MGIRGVTVSDVRGFGAQGGSPERQAGSEFSEDKFVAKVKMEIVVSKDQVEAVIDKINEVARTGEIGDGKIFC 72

[Close]

BLAST of CF811175 vs. Vitis vinifera peptide
Match: GSVIVT01010608001 (assembled CDS)

HSP 1 Score: 124.02 bits (310), Expect = 4.140e-29
Identity = 63/72 (87.50%), Postives = 66/72 (91.67%), Query Frame = 2

Query:  236 MGIRGVTVSDVRRFGAQGGLTERQAGSEFSEDKFLAKVKVEIVVSKEQVEAVIDKIIEVTRTGEIGDGKFFC 451
            MGIRGVTVSDVR FGAQGG  ERQAGSEFSEDKF+AKVK+EIVVSK+QVEAVIDKI EV RTGEIGDGK FC
Sbjct:    1 MGIRGVTVSDVRGFGAQGGSPERQAGSEFSEDKFVAKVKMEIVVSKDQVEAVIDKINEVARTGEIGDGKIFC 72

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BLAST of CF811175 vs. TAIR peptide
Match: AT4G01900.1 (| Symbols: PII, GLB1 | GLNB1 homolog | chr4:821736-823294 FORWARD LENGTH=196)

HSP 1 Score: 176.407 bits (446), Expect = 1.021e-44
Identity = 90/132 (68.18%), Postives = 103/132 (78.03%), Query Frame = 2

Query:   53 FRHSQSXXXXXXXXXXXXNASLLPIIRAQGSPDYFPDANFYKVEAILRPWRIPQVSSALLKMGIRGVTVSDVRRFGAQGGLTERQAGSEFSEDKFLAKVKVEIVVSKEQVEAVIDKIIEVTRTGEIGDGKFF 448
            FRHS+             N+ +LP++ AQ S DY PD+ FYKVEAI+RPWRI QVSSALLK+GIRGVTVSDVR FGAQGG TER  GSEFSEDKF+AKVK+EIVV K+QVE+VI+ IIE  RTGEIGDGK F
Sbjct:   35 FRHSRPSCLDLVTKSPSNNSRVLPVVSAQISSDYIPDSKFYKVEAIVRPWRIQQVSSALLKIGIRGVTVSDVRGFGAQGGSTERHGGSEFSEDKFVAKVKMEIVVKKDQVESVINTIIEGARTGEIGDGKIF 166

The following BLAST results are available for this feature:

BLAST of CF811175 vs. DB:swissprot:display
BLAST of CF811175 vs. Populus trichocarpa peptide v2.0
BLAST of CF811175 vs. P. persica 1.0 peptide
BLAST of CF811175 vs. TrEMBL
BLAST of CF811175 vs. Vitis vinifera peptide
BLAST of CF811175 vs. TAIR peptide

BLAST of CF811175 vs. DB:swissprot:display
Analysis Date: 2011-01-18 (BLAST: Vaccinium corymbosum unigene v1 vs Swissprot)
Total hits: 10


Match Name	E-value	Identity	Description
GLNB_NOSP7	1.374e-21	59.34	Nitrogen regulatory protein P-II OS=Nostoc punctif...	[more]
GLNB_FREDI	1.374e-21	59.34	Nitrogen regulatory protein P-II OS=Fremyella dipl...	[more]
GLNB_SYNY3	3.062e-21	56.04	Nitrogen regulatory protein P-II OS=Synechocystis ...	[more]
GLNB_SYNP6	3.998e-21	57.14	Nitrogen regulatory protein P-II OS=Synechococcus ...	[more]
GLNB_SYNE7	3.998e-21	57.14	Nitrogen regulatory protein P-II OS=Synechococcus ...	[more]
GLNB_PORYE	4.888e-19	50.55	Nitrogen regulatory protein P-II OS=Porphyra yezoe...	[more]
GLNB_PORPU	7.058e-18	50.55	Nitrogen regulatory protein P-II OS=Porphyra purpu...	[more]
GLNB_AQUAE	7.058e-18	47.25	Nitrogen regulatory protein P-II OS=Aquifex aeolic...	[more]
GLNB_PASMU	9.218e-18	50.55	Nitrogen regulatory protein P-II OS=Pasteurella mu...	[more]
GLNB_RHIME	3.503e-17	47.25	Nitrogen regulatory protein P-II OS=Rhizobium meli...	[more]

BLAST of CF811175 vs. Populus trichocarpa peptide v2.0
Analysis Date: 2011-01-18 (BLAST: Vaccinium corymbosum unigene v1 vs Populus trichocarpa v2.0 peptide)
Total hits: 1


Match Name	E-value	Identity	Description
POPTR_0002s19200.1	2.856e-43	75.00		[more]

BLAST of CF811175 vs. P. persica 1.0 peptide
Analysis Date: 2011-01-18 (BLAST: Vaccinium corymbosum unigene v1 vs Ppersica v1.0 peptide)
Total hits: 1


Match Name	E-value	Identity	Description
ppa011791m	8.480e-50	67.11		[more]

BLAST of CF811175 vs. TrEMBL
Analysis Date: 2011-01-18 (BLAST: Vaccinium corymbosum unigene v1 vs TrEMBL)
Total hits: 10


Match Name	E-value	Identity	Description
D7U2N2\|D7U2N2_VITVI	1.845e-47	85.96	Whole genome shotgun sequence of line PN40024, sca...	[more]
A8TU50\|A8TU50_PAESU	7.010e-47	70.20	PII protein OS=Paeonia suffruticosa PE=2 SV=1	[more]
Q6T2D2\|Q6T2D2_SOLLC	1.322e-45	84.21	PII-like protein OS=Solanum lycopersicum GN=GLB1 P...	[more]
B9RN90\|B9RN90_RICCO	8.569e-45	78.95	Nitrogen regulatory protein P-II, putative OS=Rici...	[more]
Q9ZST5\|Q9ZST5_RICCO	1.909e-44	80.53	PII protein (Fragment) OS=Ricinus communis PE=2 SV...	[more]
Q9ARI4\|Q9ARI4_MEDSA	1.237e-43	78.95	PII protein OS=Medicago sativa GN=GLNB PE=2 SV=1	[more]
C6TCD9\|C6TCD9_SOYBN	1.616e-43	78.07	Putative uncharacterized protein OS=Glycine max PE...	[more]
Q9ZST4\|Q9ZST4_ARATH	1.368e-42	68.18	At4g01900 OS=Arabidopsis thaliana GN=AT4g01900 PE=...	[more]
D7M475\|D7M475_ARALY	5.198e-42	65.91	Putative uncharacterized protein OS=Arabidopsis ly...	[more]
C6SY44\|C6SY44_SOYBN	1.158e-41	76.52	Putative uncharacterized protein OS=Glycine max PE...	[more]

BLAST of CF811175 vs. Vitis vinifera peptide
Analysis Date: 2011-01-25 (BLAST: Vaccinium corymbosum unigene v1 vs Vitis vinifera peptide)
Total hits: 3


Match Name	E-value	Identity	Description
GSVIVT01028181001	9.478e-50	85.96	assembled CDS	[more]
GSVIVT01037028001	4.140e-29	87.50	assembled CDS	[more]
GSVIVT01010608001	4.140e-29	87.50	assembled CDS	[more]

BLAST of CF811175 vs. TAIR peptide
Analysis Date: 2011-02-10 (BLAST: Vaccinium corymbosum unigene v1 vs TAIR 10 peptide)
Total hits: 1


Match Name	E-value	Identity	Description
AT4G01900.1	1.021e-44	68.18	\| Symbols: PII, GLB1 \| GLNB1 homolog \| chr4:821736...	[more]

InterPro

Analysis Name: InterProScan analysis for Vaccinium corymbosum unigene v1
Date Performed: 2011-01-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	SEG	seg	seg	coord: 49..60 score
None	No IPR available	SEG	seg	seg	coord: 24..35 score: NAcoord: 151..164 score
None	No IPR available	SEG	seg	seg	coord: 8..22 score: NAcoord: 39..58 score
None	No IPR available	SEG	seg	seg	coord: 16..28 score
IPR002187	Nitrogen regulatory protein PII	PRINTS	PR00340	PIIGLNB	coord: 58..73 score: 2.2e-23coord: 79..97 score: 2.2e-23coord: 109..132 score: 2.2e-23coord: 140..160 score: 2.2
IPR002187	Nitrogen regulatory protein PII	PFAM	PF00543	P-II	coord: 60..151 score: 1.5
IPR002187	Nitrogen regulatory protein PII	SMART	SM00938	no description	coord: 60..162 score: 4.4
IPR002187	Nitrogen regulatory protein PII	PROFILE	PS51343	PII_GLNB_DOM	coord: 57..169 score: 27
IPR011322	Nitrogen regulatory PII-like, alpha/beta	SUPERFAMILY	54913	GlnB-like	coord: 57..169 score: 2.3
IPR015867	Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal	GENE3D	3.30.70.120	no description	coord: 58..151 score: 3.6

Properties


Property Name	Value
Singlet in analysis	Vaccinium corymbosum unigene v1

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>CF811175 ID=CF811175; Name=CF811175; organism=Vaccinium corymbosum; type=EST; length=601bp
GAATGACTTCCACCTTGTGGGGTCGACTTCAATTCCCGCTTCTAGTCGCA
AGTTTAGACACTCCCAAAGTCTCCCTCTTCTTACCCTAAGACCCAAACCT
ACAAGAAATGCGTCTCTTCTTCCTATAATCAGAGCCCAGGGCTCTCCAGA
CTACTTCCCGGATGCGAATTTTTACAAAGTGGAGGCGATTTTGAGACCCT
GGCGAATCCCACAGGTTTCATCGGCCCTACTGAAAATGGGAATCCGCGGT
GTTACGGTATCTGATGTTAGACGTTTTGGTGCCCAGGGGGGTTTGACGGA
AAGGCAGGCAGGCTCTGAATTTTCTGAAGATAAGTTCTTGGCTAAAGTTA
AGGTGGAGATTGTGGTGAGCAAGGAGCAGGTTGAAGCTGTAATAGACAAG
ATCATTGAAGTGACAAGGACAGGAGAGATCGGGGATGGCAAATTTTTTTG
TGAGGGAGGAGAAAGGGCTGAGAGGATGGCAGGAGGCCGAGCTGATATGT
CCTCTCCGGTGCAAAATTAGAGCATCTCATCTAGATATAGAGAGTATTAC
CGGCCCTAGTTTCTTTTTGTGTTATTATGGTGGAGTTGGAAAAATAAAGG
G

Annotated Terms

The following terms have been associated with this EST:

Vocabulary: **Biological Process**
Term	Definition
GO:0006808	regulation of nitrogen utilization

Vocabulary: **Molecular Function**
Term	Definition
GO:0030234	enzyme regulator activity

Vocabulary: **INTERPRO**
Term	Definition
IPR002187	N-reg_PII
IPR011322	N-reg_PII-like_a/b
IPR015867	N-reg_PII/ATP_PRibTrfase_C
noIPR	unintegrated