CF811283
EST Overview
Libraries
Unigenes
This EST is part of the following unigenes:
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF811283 vs. Populus trichocarpa peptide v2.0
Match: POPTR_0010s05610.1 () HSP 1 Score: 60.8474 bits (146), Expect = 8.231e-10 Identity = 44/140 (31.43%), Postives = 60/140 (42.86%), Query Frame = 1 Query: 7 AKESDSRKRSIHLDVXXXXXXXXXXXXANAEDNGEGRKELTKDEKGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKDNLVVSHANDSSEELSDDSKRKLHSKKXXXXXXXXXXXXXXXXXXXXXKHSQRRHSPYSSXETT 426 AKE +SR++S H +V ++A++N +++ TK+++ KDN DSS+E SDDSKRK HS+K KHSQRRHSPYSS ETT Sbjct: 855 AKEPESRRKSSHPEVKEDRKEEEKPHRSSAKENAIRKRDRTKEKEEDKARHKPTSDSIKHKRTRSSSISSRGRNSKDN-------DSSDEASDDSKRK-HSRKRRSSPSPVRSRRRQVSRSPHSKHSQRRHSPYSSFETT 986
BLAST of CF811283 vs. Populus trichocarpa peptide v2.0
Match: POPTR_0008s19100.1 () HSP 1 Score: 56.6102 bits (135), Expect = 1.552e-8 Identity = 42/142 (29.58%), Postives = 59/142 (41.55%), Query Frame = 1 Query: 1 EKAKESDSRKRSIHLDVXXXXXXXXXXXXANAEDNGEGRKELTKDEKGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKDNLVVSHANDSSEELSDDSKRKLHSKKXXXXXXXXXXXXXXXXXXXXXKHSQRRHSPYSSXETT 426 E AKE +SR+RS +V ++ +++ +++ +K+++ KD NDSS+E SDDSKRK HS+K KHSQRRHSPYSS ETT Sbjct: 846 ESAKEPESRRRSSRPEVKEDRKDAEKLHRSSVKEDATRKRDRSKEKEEDRARHKPTSDSSKHKRTRSSSISSRGRNSKD-------NDSSDEASDDSKRK-HSRKRRSSPSPVRSRRRQVSRSPHSKHSQRRHSPYSSLETT 979
BLAST of CF811283 vs. P. persica 1.0 peptide
Match: ppa017760m () HSP 1 Score: 51.6026 bits (122), Expect = 3.529e-7 Identity = 40/141 (28.37%), Postives = 57/141 (40.43%), Query Frame = 1 Query: 1 EKAKESDSRKRSIHLDVXXXXXXXXXXXXANAEDNGEGRKELTKDEKGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKDNLVVSHANDSSEELSDDSKRKLHSKKXXXXXXXXXXXXXXXXXXXXXKHSQRRHSPYSSXET 423 EKA+ES+SRKRS H D ++A+++ ++E KD++ KDNL V+HANDS + HS++ KHSQRRHSPYSS ++ Sbjct: 814 EKAQESESRKRSSHADDKEDRRETERLHSSSAKEDNNRKREQAKDKEDDRSRRKHSTDSSRHKRRRSSSVGSRGRNSKDNL-VNHANDSI------MCCRKHSRRRNLSPSPVRSRRRQVSRSPHSKHSQRRHSPYSSVDS 947
BLAST of CF811283 vs. TrEMBL
Match: D7SSL3|D7SSL3_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_291.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00005755001 PE=4 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 4.884e-10 Identity = 36/65 (55.38%), Postives = 39/65 (60.00%), Query Frame = 1 Query: 232 KDNLVVSHANDSSEELSDDSKRKLHSKKXXXXXXXXXXXXXXXXXXXXXKHSQRRHSPYSSXETT 426 KDN VVSH N SS+E S+DSKRKLHS+K KHSQRRHSPYSS ETT Sbjct: 18 KDNSVVSHTNASSDEASEDSKRKLHSRKRNLSPSPTRSRIRQVSRSPHSKHSQRRHSPYSSFETT 82
BLAST of CF811283 vs. TrEMBL
Match: A5BSI2|A5BSI2_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_008968 PE=4 SV=1) HSP 1 Score: 60.077 bits (144), Expect = 1.737e-7 Identity = 39/104 (37.50%), Postives = 46/104 (44.23%), Query Frame = 1 Query: 1 EKAKESDSRKRSIHLDVXXXXXXXXXXXXANAEDNGEGRKELTKDEKGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKDNLVVSHANDSSEELSDDSKRKLHSK 312 EKAKESDSRKRS HLDV AN + + E + DEK KDN VVSH N SS+E S+DSKR +S+ Sbjct: 478 EKAKESDSRKRSAHLDVKEDRKETEKFKRANVKAESIQKXERSNDEKEDRSRHKLANESGMHKRRRSSSISSRGRSSKDNSVVSHTNASSDEASEDSKRSTNSE 581
BLAST of CF811283 vs. Vitis vinifera peptide
Match: GSVIVT01005755001 (assembled CDS) HSP 1 Score: 68.5514 bits (166), Expect = 2.384e-12 Identity = 36/65 (55.38%), Postives = 39/65 (60.00%), Query Frame = 1 Query: 232 KDNLVVSHANDSSEELSDDSKRKLHSKKXXXXXXXXXXXXXXXXXXXXXKHSQRRHSPYSSXETT 426 KDN VVSH N SS+E S+DSKRKLHS+K KHSQRRHSPYSS ETT Sbjct: 18 KDNSVVSHTNASSDEASEDSKRKLHSRKRNLSPSPTRSRIRQVSRSPHSKHSQRRHSPYSSFETT 82 The following BLAST results are available for this feature:
BLAST of CF811283 vs. Populus trichocarpa peptide v2.0
Analysis Date: 2011-01-18 (BLAST: Vaccinium corymbosum unigene v1 vs Populus trichocarpa v2.0 peptide) Total hits: 2
BLAST of CF811283 vs. P. persica 1.0 peptide
Analysis Date: 2011-01-18 (BLAST: Vaccinium corymbosum unigene v1 vs Ppersica v1.0 peptide) Total hits: 1
BLAST of CF811283 vs. TrEMBL
Analysis Date: 2011-01-18 (BLAST: Vaccinium corymbosum unigene v1 vs TrEMBL) Total hits: 2
BLAST of CF811283 vs. Vitis vinifera peptide
Analysis Date: 2011-01-25 (BLAST: Vaccinium corymbosum unigene v1 vs Vitis vinifera peptide) Total hits: 1
InterPro
Analysis Name: InterProScan analysis for Vaccinium corymbosum unigene v1
Date Performed: 2011-01-18
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CF811283 ID=CF811283; Name=CF811283; organism=Vaccinium corymbosum; type=EST; length=654bpback to top Annotated Terms
The
following terms have been associated with
this EST:
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