CF811283

EST Overview
NameCF811283
Unique NameCF811283
TypeEST
OrganismVaccinium corymbosum (northern highbush blueberry)
Sequence length654
Libraries
Library NameType
LIBEST_014531 cDNA non acclimated Bluecrop librarycdna_library
Unigenes
This EST is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Vaccinium corymbosum unigene v1EST
Homology
BLAST of CF811283 vs. Populus trichocarpa peptide v2.0
Match: POPTR_0010s05610.1 ()

HSP 1 Score: 60.8474 bits (146), Expect = 8.231e-10
Identity = 44/140 (31.43%), Postives = 60/140 (42.86%), Query Frame = 1
Query:    7 AKESDSRKRSIHLDVXXXXXXXXXXXXANAEDNGEGRKELTKDEKGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKDNLVVSHANDSSEELSDDSKRKLHSKKXXXXXXXXXXXXXXXXXXXXXKHSQRRHSPYSSXETT 426
            AKE +SR++S H +V            ++A++N   +++ TK+++                              KDN       DSS+E SDDSKRK HS+K                     KHSQRRHSPYSS ETT
Sbjct:  855 AKEPESRRKSSHPEVKEDRKEEEKPHRSSAKENAIRKRDRTKEKEEDKARHKPTSDSIKHKRTRSSSISSRGRNSKDN-------DSSDEASDDSKRK-HSRKRRSSPSPVRSRRRQVSRSPHSKHSQRRHSPYSSFETT 986          
BLAST of CF811283 vs. Populus trichocarpa peptide v2.0
Match: POPTR_0008s19100.1 ()

HSP 1 Score: 56.6102 bits (135), Expect = 1.552e-8
Identity = 42/142 (29.58%), Postives = 59/142 (41.55%), Query Frame = 1
Query:    1 EKAKESDSRKRSIHLDVXXXXXXXXXXXXANAEDNGEGRKELTKDEKGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKDNLVVSHANDSSEELSDDSKRKLHSKKXXXXXXXXXXXXXXXXXXXXXKHSQRRHSPYSSXETT 426
            E AKE +SR+RS   +V            ++ +++   +++ +K+++                              KD       NDSS+E SDDSKRK HS+K                     KHSQRRHSPYSS ETT
Sbjct:  846 ESAKEPESRRRSSRPEVKEDRKDAEKLHRSSVKEDATRKRDRSKEKEEDRARHKPTSDSSKHKRTRSSSISSRGRNSKD-------NDSSDEASDDSKRK-HSRKRRSSPSPVRSRRRQVSRSPHSKHSQRRHSPYSSLETT 979          
BLAST of CF811283 vs. P. persica 1.0 peptide
Match: ppa017760m ()

HSP 1 Score: 51.6026 bits (122), Expect = 3.529e-7
Identity = 40/141 (28.37%), Postives = 57/141 (40.43%), Query Frame = 1
Query:    1 EKAKESDSRKRSIHLDVXXXXXXXXXXXXANAEDNGEGRKELTKDEKGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKDNLVVSHANDSSEELSDDSKRKLHSKKXXXXXXXXXXXXXXXXXXXXXKHSQRRHSPYSSXET 423
            EKA+ES+SRKRS H D             ++A+++   ++E  KD++                              KDNL V+HANDS          + HS++                     KHSQRRHSPYSS ++
Sbjct:  814 EKAQESESRKRSSHADDKEDRRETERLHSSSAKEDNNRKREQAKDKEDDRSRRKHSTDSSRHKRRRSSSVGSRGRNSKDNL-VNHANDSI------MCCRKHSRRRNLSPSPVRSRRRQVSRSPHSKHSQRRHSPYSSVDS 947          
BLAST of CF811283 vs. TrEMBL
Match: D7SSL3|D7SSL3_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_291.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00005755001 PE=4 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 4.884e-10
Identity = 36/65 (55.38%), Postives = 39/65 (60.00%), Query Frame = 1
Query:  232 KDNLVVSHANDSSEELSDDSKRKLHSKKXXXXXXXXXXXXXXXXXXXXXKHSQRRHSPYSSXETT 426
            KDN VVSH N SS+E S+DSKRKLHS+K                     KHSQRRHSPYSS ETT
Sbjct:   18 KDNSVVSHTNASSDEASEDSKRKLHSRKRNLSPSPTRSRIRQVSRSPHSKHSQRRHSPYSSFETT 82          
BLAST of CF811283 vs. TrEMBL
Match: A5BSI2|A5BSI2_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_008968 PE=4 SV=1)

HSP 1 Score: 60.077 bits (144), Expect = 1.737e-7
Identity = 39/104 (37.50%), Postives = 46/104 (44.23%), Query Frame = 1
Query:    1 EKAKESDSRKRSIHLDVXXXXXXXXXXXXANAEDNGEGRKELTKDEKGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKDNLVVSHANDSSEELSDDSKRKLHSK 312
            EKAKESDSRKRS HLDV            AN +     + E + DEK                              KDN VVSH N SS+E S+DSKR  +S+
Sbjct:  478 EKAKESDSRKRSAHLDVKEDRKETEKFKRANVKAESIQKXERSNDEKEDRSRHKLANESGMHKRRRSSSISSRGRSSKDNSVVSHTNASSDEASEDSKRSTNSE 581          
BLAST of CF811283 vs. Vitis vinifera peptide
Match: GSVIVT01005755001 (assembled CDS)

HSP 1 Score: 68.5514 bits (166), Expect = 2.384e-12
Identity = 36/65 (55.38%), Postives = 39/65 (60.00%), Query Frame = 1
Query:  232 KDNLVVSHANDSSEELSDDSKRKLHSKKXXXXXXXXXXXXXXXXXXXXXKHSQRRHSPYSSXETT 426
            KDN VVSH N SS+E S+DSKRKLHS+K                     KHSQRRHSPYSS ETT
Sbjct:   18 KDNSVVSHTNASSDEASEDSKRKLHSRKRNLSPSPTRSRIRQVSRSPHSKHSQRRHSPYSSFETT 82          
The following BLAST results are available for this feature:
BLAST of CF811283 vs. Populus trichocarpa peptide v2.0
Analysis Date: 2011-01-18 (BLAST: Vaccinium corymbosum unigene v1 vs Populus trichocarpa v2.0 peptide)
Total hits: 2
Match NameE-valueIdentityDescription
POPTR_0010s05610.18.231e-1031.43[more]
POPTR_0008s19100.11.552e-829.58[more]
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BLAST of CF811283 vs. P. persica 1.0 peptide
Analysis Date: 2011-01-18 (BLAST: Vaccinium corymbosum unigene v1 vs Ppersica v1.0 peptide)
Total hits: 1
Match NameE-valueIdentityDescription
ppa017760m3.529e-728.37[more]
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BLAST of CF811283 vs. TrEMBL
Analysis Date: 2011-01-18 (BLAST: Vaccinium corymbosum unigene v1 vs TrEMBL)
Total hits: 2
Match NameE-valueIdentityDescription
D7SSL3|D7SSL3_VITVI4.884e-1055.38Whole genome shotgun sequence of line PN40024, sca... [more]
A5BSI2|A5BSI2_VITVI1.737e-737.50Putative uncharacterized protein OS=Vitis vinifera... [more]
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BLAST of CF811283 vs. Vitis vinifera peptide
Analysis Date: 2011-01-25 (BLAST: Vaccinium corymbosum unigene v1 vs Vitis vinifera peptide)
Total hits: 1
Match NameE-valueIdentityDescription
GSVIVT010057550012.384e-1255.38assembled CDS[more]
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InterPro
Analysis Name: InterProScan analysis for Vaccinium corymbosum unigene v1
Date Performed: 2011-01-18
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSEGsegsegcoord: 18..29
score: NAcoord: 49..77
score: NAcoord: 106..126
score: NAcoord: 134..157
score
NoneNo IPR availableSEGsegsegcoord: 58..69
score
NoneNo IPR availableSEGsegsegcoord: 67..78
score
NoneNo IPR availableSEGsegsegcoord: 1..69
score

Properties
Property NameValue
Singlet in analysisVaccinium corymbosum unigene v1
Sequences
The following sequences are available for this feature:

EST sequence

>CF811283 ID=CF811283; Name=CF811283; organism=Vaccinium corymbosum; type=EST; length=654bp
GAGAAGGCAAAGGAATCTGATTCAAGGAAAAGGTCTATTCATCTTGATGT
TAAGGAGGATAGGAAGGAAAAACAGAAGGACAGGAGAGCTAATGCTGAAG
ATAATGGCGAGGGAAGAAAAGAACTCACAAAGGATGAGAAGGGAGAAAGA
TCAAGACCTAGGCTTTCTAGTGAATCAAGCAGACATAAAAGGCGTCGATC
TTCTTCAGTTGGCAGTAGAGGTAGAAGCAGCAAGGACAATTTAGTGGTTA
GTCATGCCAATGACTCAAGTGAGGAATTGTCAGATGATTCTAAAAGGAAG
CTGCACTCAAAAAAGCGCAACTTATCACCATCACCTAACAGGTCTAGGAG
AAGACAAGATTCGCGGTCTCCACATAGCAAGCATTCTCAGCGCAGGCATT
CTCCCTACTCTTCTCNTGAGACCACAAGGAGGAGGAGGTCGAGGTCCAGG
TCACCTGTTCGTCGACAAAGATGATTGTGAAGGATGTAGGCTTAAATTGC
TTCACATTGGTGCGAGAAATTTCACATTGAAGGCATGGACCATGCTTTGC
AAACTGAGATCTATTATACGACAAGGATGCATANATACAGGTCCTGNGTG
ACAGGGTATTCCAAGTTGGTGTCCTCGAGGGGAATAAAAGAGGTCCTATG
TNAB
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Annotated Terms
The following terms have been associated with this EST:
Vocabulary: INTERPRO
TermDefinition
noIPRunintegrated