CV090402 | GDV

EST Overview


Name	CV090402
Unique Name	CV090402
Type	EST
Organism	Vaccinium corymbosum (northern highbush blueberry)
Sequence length	707

Libraries


Library Name	Type
LIBEST_014530 cDNA cold acclimated Bluecrop library	cdna_library

Unigenes

This EST is part of the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
	Vaccinium corymbosum unigene v1	EST

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
Vaccinium corymbosum unigene v1	2011-01-18
BLAST: Vaccinium corymbosum unigene v1 vs Populus trichocarpa v2.0 peptide	2011-01-18
BLAST: Vaccinium corymbosum unigene v1 vs Ppersica v1.0 peptide	2011-01-18
BLAST: Vaccinium corymbosum unigene v1 vs Swissprot	2011-01-18
BLAST: Vaccinium corymbosum unigene v1 vs TrEMBL	2011-01-18
BLAST: Vaccinium corymbosum unigene v1 vs Vitis vinifera peptide	2011-01-25
BLAST: Vaccinium corymbosum unigene v1 vs TAIR 10 peptide	2011-02-10
InterProScan analysis for Vaccinium corymbosum unigene v1	2011-01-18

Homology

[Close]

BLAST of CV090402 vs. DB:swissprot:display
Match: APO3_ARATH (APO protein 3, mitochondrial OS=Arabidopsis thaliana GN=APO3 PE=2 SV=1)

HSP 1 Score: 112.079 bits (279), Expect = 3.041e-24
Identity = 52/85 (61.18%), Postives = 62/85 (72.94%), Query Frame = 1

Query:   10 KHQMRNGQHAWQEATVDDLVPPVYVWHVRDLRDGGVLIDRLKRYYGKLPAVVELFAQAGARVGENYVGLMREDVALPELDEEKLV 264
            KHQMR+G HAWQEAT+DD+V P YVWHVRD  DG VL + LKR+YGK PAV+E+  Q GA V + Y  +MR DV  P+ DE  LV
Sbjct:  317 KHQMRDGMHAWQEATIDDVVGPTYVWHVRDPTDGSVLDNSLKRFYGKAPAVIEMCVQGGAPVPDQYNSMMRLDVVYPQRDEVDLV 401

[Close]

BLAST of CV090402 vs. DB:swissprot:display
Match: APO1_ARATH (APO protein 1, chloroplastic OS=Arabidopsis thaliana GN=APO1 PE=2 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 2.664e-20
Identity = 44/87 (50.57%), Postives = 62/87 (71.26%), Query Frame = 1

Query:    4 EYKHQMRNGQHAWQEATVDDLVPPVYVWHVRDLRDGGVLIDRLKRYYGKLPAVVELFAQAGARVGENYVGLMREDVALPELDEEKLV 264
            E+KHQ R+G+H WQ+A VD++ PP YVWHVRDL+ G  L   L+R+YGK PA+VE+   +GARV + Y  +MR D+ +P+  E  +V
Sbjct:  350 EFKHQWRDGKHGWQDALVDEVFPPNYVWHVRDLK-GNPLTGNLRRFYGKAPALVEICMHSGARVPQRYKAMMRLDIIVPDSQEADMV 435

[Close]

BLAST of CV090402 vs. DB:swissprot:display
Match: APO2_ARATH (APO protein 2, chloroplastic OS=Arabidopsis thaliana GN=APO2 PE=2 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 1.462e-18
Identity = 46/88 (52.27%), Postives = 62/88 (70.45%), Query Frame = 1

Query:    7 YKHQMRNGQHAWQEATVDDLVPPVYVWHVRDLRDGGVLIDRLKRYYGKLPAVVELFAQAGARVGENYVGLMREDVALP-ELDEEKLVV 267
            +KHQ RNGQH WQ A +DDL+PP YVWHV D+ +G  +   L+ +YG+ PAVVE+ AQAGA V E+Y   MR +V +P  + E ++VV
Sbjct:  354 FKHQQRNGQHGWQSAVLDDLIPPRYVWHVPDV-NGPPMQRELRSFYGQAPAVVEICAQAGAVVPEHYRATMRLEVGIPSSVKEAEMVV 440

[Close]

BLAST of CV090402 vs. DB:swissprot:display
Match: APO4_ARATH (APO protein 4, mitochondrial OS=Arabidopsis thaliana GN=APO4 PE=2 SV=2)

HSP 1 Score: 58.5362 bits (140), Expect = 3.991e-8
Identity = 30/72 (41.67%), Postives = 42/72 (58.33%), Query Frame = 1

Query:    7 YKHQMRNGQHAWQEATVDDLVPPVYVWHVRDLRDGGVLIDRLKRYYGKLPAVVELFAQAGARVGENYVGLMR 222
            +K++   G H W++A V+DLVP   VWH R  +D  VL+D  + YYG  PA+V L +  GA V   Y   M+
Sbjct:  250 FKYESWRGTHYWEKAGVNDLVPEKMVWHRRP-QDPVVLVDEGRSYYGHAPAIVSLCSHTGAIVPVKYACKMK 320

[Close]

BLAST of CV090402 vs. Populus trichocarpa peptide v2.0
Match: POPTR_0015s11750.2 ()

HSP 1 Score: 104.375 bits (259), Expect = 7.323e-23
Identity = 54/85 (63.53%), Postives = 62/85 (72.94%), Query Frame = 1

Query:   10 KHQMRNGQHAWQEATVDDLVPPVYVWHVRDLRDGGVLIDRLKRYYGKLPAVVELFAQAGARVGENYVGLMREDVALPELDEEKLV 264
            KHQ R+G HAWQEAT+DDLV P YVWHVRD  +G  L ++LKRYYGK PAVVEL  QAGA V + Y  +MR DV  P+ DE  LV
Sbjct:  317 KHQHRDGLHAWQEATIDDLVAPNYVWHVRD-TNGLPLDNKLKRYYGKAPAVVELCVQAGAPVPDQYRSMMRLDVVPPDRDEVDLV 400

[Close]

BLAST of CV090402 vs. Populus trichocarpa peptide v2.0
Match: POPTR_0015s11750.1 ()

HSP 1 Score: 104.375 bits (259), Expect = 7.323e-23
Identity = 54/85 (63.53%), Postives = 62/85 (72.94%), Query Frame = 1

Query:   10 KHQMRNGQHAWQEATVDDLVPPVYVWHVRDLRDGGVLIDRLKRYYGKLPAVVELFAQAGARVGENYVGLMREDVALPELDEEKLV 264
            KHQ R+G HAWQEAT+DDLV P YVWHVRD  +G  L ++LKRYYGK PAVVEL  QAGA V + Y  +MR DV  P+ DE  LV
Sbjct:  339 KHQHRDGLHAWQEATIDDLVAPNYVWHVRD-TNGLPLDNKLKRYYGKAPAVVELCVQAGAPVPDQYRSMMRLDVVPPDRDEVDLV 422

[Close]

BLAST of CV090402 vs. Populus trichocarpa peptide v2.0
Match: POPTR_0016s00340.1 ()

HSP 1 Score: 99.7525 bits (247), Expect = 1.804e-21
Identity = 49/86 (56.98%), Postives = 62/86 (72.09%), Query Frame = 1

Query:    7 YKHQMRNGQHAWQEATVDDLVPPVYVWHVRDLRDGGVLIDRLKRYYGKLPAVVELFAQAGARVGENYVGLMREDVALPELDEEKLV 264
            +KHQ R+G+H WQ+A VD++ PP  VWHVRD R G  L   LKR+YGK PAVVE+  QAGA+V + Y  +MR D+ +PE DE KLV
Sbjct:  325 FKHQWRDGKHGWQDAIVDEVFPPNCVWHVRDPR-GPPLRSALKRFYGKAPAVVEVCMQAGAQVPDRYKPMMRLDIIVPESDEAKLV 409

[Close]

BLAST of CV090402 vs. Populus trichocarpa peptide v2.0
Match: POPTR_0006s19750.1 ()

HSP 1 Score: 93.2041 bits (230), Expect = 1.688e-19
Identity = 45/88 (51.14%), Postives = 60/88 (68.18%), Query Frame = 1

Query:    7 YKHQMRNGQHAWQEATVDDLVPPVYVWHVRDLRDGGVLIDRLKRYYGKLPAVVELFAQAGARVGENYVGLMREDVALP-ELDEEKLVV 267
            +KHQ RNGQH WQ A +D+L+PP YVWHV D+ DG  L   L+ +YG+ PAVVE+  QAGA V + Y   MR D+ +P  + E ++VV
Sbjct:  332 HKHQQRNGQHGWQSAVLDNLIPPRYVWHVPDV-DGPPLRRELRNFYGQAPAVVEICVQAGAAVPDQYKSTMRLDIGIPSSVKEAEMVV 418

[Close]

BLAST of CV090402 vs. Populus trichocarpa peptide v2.0
Match: POPTR_0018s11560.1 ()

HSP 1 Score: 89.3521 bits (220), Expect = 2.438e-18
Identity = 43/83 (51.81%), Postives = 55/83 (66.27%), Query Frame = 1

Query:    7 YKHQMRNGQHAWQEATVDDLVPPVYVWHVRDLRDGGVLIDRLKRYYGKLPAVVELFAQAGARVGENYVGLMREDVALPELDEE 255
            +KHQ RNGQH WQ A +DDL+PP YVWHV D+  G  L   L+ +YG+ PAVVE+  QAGA V + Y   MR D+ +P   +E
Sbjct:  369 HKHQQRNGQHGWQSAVLDDLIPPRYVWHVPDV-VGLPLRRELRNFYGQAPAVVEICFQAGAAVPDQYKSTMRLDIGIPSSVKE 450

[Close]

BLAST of CV090402 vs. Populus trichocarpa peptide v2.0
Match: POPTR_0017s06490.1 ()

HSP 1 Score: 56.6102 bits (135), Expect = 1.751e-8
Identity = 29/72 (40.28%), Postives = 44/72 (61.11%), Query Frame = 1

Query:    7 YKHQMRNGQHAWQEATVDDLVPPVYVWHVRDLRDGGVLIDRLKRYYGKLPAVVELFAQAGARVGENYVGLMR 222
            +K +  +G+H W++A VDDLVPP  VW  R  +D  VL++  + +YG  PAVV+L  + G  V   Y  +M+
Sbjct:  248 FKFESWHGKHFWKKAEVDDLVPPKIVWRRRP-QDPLVLVNEGRDFYGHAPAVVDLCTKTGIIVPTKYSCMMK 318

[Close]

BLAST of CV090402 vs. P. persica 1.0 peptide
Match: ppa006172m ()

HSP 1 Score: 100.523 bits (249), Expect = 7.462e-22
Identity = 53/85 (62.35%), Postives = 60/85 (70.59%), Query Frame = 1

Query:   10 KHQMRNGQHAWQEATVDDLVPPVYVWHVRDLRDGGVLIDRLKRYYGKLPAVVELFAQAGARVGENYVGLMREDVALPELDEEKLV 264
            KHQ RNG HAWQEAT++D V   YVWHVRD+ +   L + LKRYYGK PAVVEL  QAGA V + Y  +MR DVA PE DE  LV
Sbjct:  340 KHQSRNGLHAWQEATIEDFVGLNYVWHVRDV-NCPALDNNLKRYYGKAPAVVELCVQAGAPVPDEYRSMMRLDVASPERDEVDLV 423

[Close]

BLAST of CV090402 vs. P. persica 1.0 peptide
Match: ppa005803m ()

HSP 1 Score: 98.9821 bits (245), Expect = 2.171e-21
Identity = 44/87 (50.57%), Postives = 63/87 (72.41%), Query Frame = 1

Query:    4 EYKHQMRNGQHAWQEATVDDLVPPVYVWHVRDLRDGGVLIDRLKRYYGKLPAVVELFAQAGARVGENYVGLMREDVALPELDEEKLV 264
            E+KHQ R+G+H WQ+ATVD++ PP YVWHV+D +   +    LK++YGK PAVVE+  QAGA++ E Y  +MR D+ +P+ +E  LV
Sbjct:  356 EFKHQWRDGKHGWQDATVDEVFPPNYVWHVKDPKGPPMKGGALKKFYGKAPAVVEVCLQAGAQIPEKYKPMMRLDIVVPDSEEALLV 442

[Close]

BLAST of CV090402 vs. P. persica 1.0 peptide
Match: ppa005668m ()

HSP 1 Score: 90.8929 bits (224), Expect = 5.912e-19
Identity = 45/88 (51.14%), Postives = 60/88 (68.18%), Query Frame = 1

Query:    7 YKHQMRNGQHAWQEATVDDLVPPVYVWHVRDLRDGGVLIDRLKRYYGKLPAVVELFAQAGARVGENYVGLMREDVALPE-LDEEKLVV 267
            +KHQ RNGQH WQ A ++DL+PP YVWHV D+ +G  +   L+ +YG+ PAVVE+  QAGA V E Y   MR DV +P  + E ++VV
Sbjct:  363 FKHQQRNGQHGWQAAVLNDLIPPRYVWHVPDV-NGPPMERELRNFYGQAPAVVEMCIQAGAAVPEEYRPTMRLDVGIPSTIKEAEMVV 449

[Close]

BLAST of CV090402 vs. P. persica 1.0 peptide
Match: ppa008702m ()

HSP 1 Score: 63.1586 bits (152), Expect = 1.320e-10
Identity = 33/72 (45.83%), Postives = 45/72 (62.50%), Query Frame = 1

Query:    7 YKHQMRNGQHAWQEATVDDLVPPVYVWHVRDLRDGGVLIDRLKRYYGKLPAVVELFAQAGARVGENYVGLMR 222
            +K++   G H W++A VDDLVPP  VW  R  +D  VL++  + +YG  PAVVEL  QAGA   + Y  LM+
Sbjct:  245 FKYESWQGTHFWRKANVDDLVPPKIVWRRRP-QDPQVLLNEGRGFYGHAPAVVELCTQAGAIAPKKYHCLMK 315

[Close]

BLAST of CV090402 vs. P. persica 1.0 peptide
Match: ppa007230m ()

HSP 1 Score: 59.6918 bits (143), Expect = 1.460e-9
Identity = 32/65 (49.23%), Postives = 41/65 (63.08%), Query Frame = 1

Query:   28 GQHAWQEATVDDLVPPVYVWHVRDLRDGGVLIDRLKRYYGKLPAVVELFAQAGARVGENYVGLMR 222
            G H W++A VDDL+PP  VW  R L+D  VL++  + +YG  PAVVEL  QAGA     Y  LM+
Sbjct:  238 GTHFWRKANVDDLMPPKIVWR-RRLQDPQVLLNEGRGFYGHAPAVVELCTQAGAVAPLKYHCLMK 301

[Close]

BLAST of CV090402 vs. TrEMBL
Match: D7SQI0|D7SQI0_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_52.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00029312001 PE=4 SV=1)

HSP 1 Score: 156.377 bits (394), Expect = 2.101e-36
Identity = 72/89 (80.90%), Postives = 82/89 (92.13%), Query Frame = 1

Query:    1 QEYKHQMRNGQHAWQEATVDDLVPPVYVWHVRDLRDGGVLIDRLKRYYGKLPAVVELFAQAGARVGENYVGLMREDVALPELDEEKLVV 267
            Q YKHQMR+GQHAWQEATVDDL+PPV+VWHVRD++DGG L++ L+RYYGKLPAVVELFAQAGA VGENYV +MREDVA+P LDEEK VV
Sbjct:  366 QAYKHQMRDGQHAWQEATVDDLIPPVHVWHVRDVQDGGPLVNGLQRYYGKLPAVVELFAQAGANVGENYVAMMREDVAVPGLDEEKWVV 454

[Close]

BLAST of CV090402 vs. TrEMBL
Match: B9RX46|B9RX46_RICCO (APO protein 3, mitochondrial, putative OS=Ricinus communis GN=RCOM_0817270 PE=4 SV=1)

HSP 1 Score: 144.821 bits (364), Expect = 6.327e-33
Identity = 66/89 (74.16%), Postives = 77/89 (86.52%), Query Frame = 1

Query:    1 QEYKHQMRNGQHAWQEATVDDLVPPVYVWHVRDLRDGGVLIDRLKRYYGKLPAVVELFAQAGARVGENYVGLMREDVALPELDEEKLVV 267
            Q YKHQMR+GQHAWQ+ATV+DLVPPVYVWHVRD + G  L++ LKRYYG LPAV+ELFAQAGA V ++Y GLMREDV +PELDEEK V+
Sbjct:  302 QAYKHQMRDGQHAWQQATVNDLVPPVYVWHVRDQQSGEPLVNNLKRYYGMLPAVLELFAQAGAHVSDDYAGLMREDVTVPELDEEKWVI 390

[Close]

BLAST of CV090402 vs. TrEMBL
Match: D7MKP1|D7MKP1_ARALY (Putative uncharacterized protein (Fragment) OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_496364 PE=4 SV=1)

HSP 1 Score: 111.309 bits (277), Expect = 7.752e-23
Identity = 52/85 (61.18%), Postives = 62/85 (72.94%), Query Frame = 1

Query:   10 KHQMRNGQHAWQEATVDDLVPPVYVWHVRDLRDGGVLIDRLKRYYGKLPAVVELFAQAGARVGENYVGLMREDVALPELDEEKLV 264
            KHQMR+G HAWQEAT+DD+V P YVWHVRD  DG VL + LKR+YGK PAVVE+  Q GA + + Y  +MR DV  P+ DE  LV
Sbjct:  315 KHQMRDGMHAWQEATIDDVVGPNYVWHVRDPTDGSVLDNSLKRFYGKAPAVVEMCVQGGAPIPDQYKSMMRLDVVYPQRDEVDLV 399

[Close]

BLAST of CV090402 vs. TrEMBL
Match: A9RU73|A9RU73_PHYPA (Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_56142 PE=4 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 1.462e-21
Identity = 50/86 (58.14%), Postives = 64/86 (74.42%), Query Frame = 1

Query:    7 YKHQMRNGQHAWQEATVDDLVPPVYVWHVRDLRDGGVLIDRLKRYYGKLPAVVELFAQAGARVGENYVGLMREDVALPELDEEKLV 264
            +KHQ RNGQH WQ+A +DDL+PP YVWHVRD+ +G  L + L +YYGK PA+VEL  QAGA +   Y  LMR DV +P+LDE ++V
Sbjct:  251 FKHQWRNGQHGWQDAALDDLIPPRYVWHVRDV-NGPPLNNSLSKYYGKAPAIVELCVQAGAAIPMKYKPLMRLDVIIPDLDELEMV 335

[Close]

BLAST of CV090402 vs. TrEMBL
Match: D5A9B9|D5A9B9_PICSI (Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 4.254e-21
Identity = 49/88 (55.68%), Postives = 63/88 (71.59%), Query Frame = 1

Query:    1 QEYKHQMRNGQHAWQEATVDDLVPPVYVWHVRDLRDGGVLIDRLKRYYGKLPAVVELFAQAGARVGENYVGLMREDVALPELDEEKLV 264
            Q +KHQ R+GQH WQEAT DDL+PP YVWHVRD  +G  L +++++YYG  PAVVEL  Q GA V + Y  +MR DV +P+ +E K V
Sbjct:  355 QAHKHQWRDGQHGWQEATFDDLIPPKYVWHVRD-PNGPPLENKMRKYYGMAPAVVELCVQGGATVPDEYKSMMRLDVTIPDFEEIKFV 441

[Close]

BLAST of CV090402 vs. TrEMBL
Match: B9IFL1|B9IFL1_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_824805 PE=4 SV=1)

HSP 1 Score: 104.375 bits (259), Expect = 9.476e-21
Identity = 54/85 (63.53%), Postives = 62/85 (72.94%), Query Frame = 1

Query:   10 KHQMRNGQHAWQEATVDDLVPPVYVWHVRDLRDGGVLIDRLKRYYGKLPAVVELFAQAGARVGENYVGLMREDVALPELDEEKLV 264
            KHQ R+G HAWQEAT+DDLV P YVWHVRD  +G  L ++LKRYYGK PAVVEL  QAGA V + Y  +MR DV  P+ DE  LV
Sbjct:  256 KHQHRDGLHAWQEATIDDLVAPNYVWHVRD-TNGLPLDNKLKRYYGKAPAVVELCVQAGAPVPDQYRSMMRLDVVPPDRDEVDLV 339

[Close]

BLAST of CV090402 vs. TrEMBL
Match: B9S4A8|B9S4A8_RICCO (APO protein 3, mitochondrial, putative OS=Ricinus communis GN=RCOM_0688760 PE=4 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 1.238e-20
Identity = 48/87 (55.17%), Postives = 64/87 (73.56%), Query Frame = 1

Query:    4 EYKHQMRNGQHAWQEATVDDLVPPVYVWHVRDLRDGGVLIDRLKRYYGKLPAVVELFAQAGARVGENYVGLMREDVALPELDEEKLV 264
            E+KHQ R+G+H WQ+AT++++ PP YVWHVRD + G  L   LK++YGK PAVVE+  QAGA + E Y  +MR D+ +PE DE KLV
Sbjct:  314 EFKHQWRDGKHGWQDATLEEVFPPKYVWHVRDPK-GPPLKGALKKFYGKAPAVVEMCMQAGAEIPEKYKPMMRLDIMIPETDEAKLV 399

[Close]

BLAST of CV090402 vs. TrEMBL
Match: C5XUW1|C5XUW1_SORBI (Putative uncharacterized protein Sb04g022910 OS=Sorghum bicolor GN=Sb04g022910 PE=4 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 3.601e-20
Identity = 55/87 (63.22%), Postives = 59/87 (67.82%), Query Frame = 1

Query:   10 KHQMRNGQHAWQEATVDDLVPPVYVWHVRDLR--DGGVLIDRLKRYYGKLPAVVELFAQAGARVGENYVGLMREDVALPELDEEKLV 264
            KHQ R+GQHAWQEATVDDLVPP YVWHV D    +   L + LKRYYGK PAVVEL  QAGA V   Y  +MR DV  P  DE  LV
Sbjct:  336 KHQQRDGQHAWQEATVDDLVPPNYVWHVADPAGDESLPLANELKRYYGKAPAVVELCVQAGAPVPAAYRSMMRLDVVPPARDEYDLV 422

[Close]

BLAST of CV090402 vs. TrEMBL
Match: B9RA65|B9RA65_RICCO (Translation factor sui1, putative OS=Ricinus communis GN=RCOM_1503530 PE=4 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 4.703e-20
Identity = 52/85 (61.18%), Postives = 61/85 (71.76%), Query Frame = 1

Query:   10 KHQMRNGQHAWQEATVDDLVPPVYVWHVRDLRDGGVLIDRLKRYYGKLPAVVELFAQAGARVGENYVGLMREDVALPELDEEKLV 264
            KHQ R+GQHAWQEAT++DLV P YVWHV+D+ +G  L + LKRYYGK PAVVEL   AGA V + Y  +MR DV  P  DE  LV
Sbjct:  330 KHQARDGQHAWQEATIEDLVGPNYVWHVQDV-NGPPLDNNLKRYYGKAPAVVELCVHAGAPVPDQYRSMMRLDVVPPNRDEVDLV 413

[Close]

BLAST of CV090402 vs. TrEMBL
Match: D7SI18|D7SI18_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_0.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00007874001 PE=4 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 8.022e-20
Identity = 51/85 (60.00%), Postives = 60/85 (70.59%), Query Frame = 1

Query:   10 KHQMRNGQHAWQEATVDDLVPPVYVWHVRDLRDGGVLIDRLKRYYGKLPAVVELFAQAGARVGENYVGLMREDVALPELDEEKLV 264
            KHQ RNG HAWQEAT+DDLV P YVWHV+D ++   L + LKRYYGK PAVVEL  Q GA + + Y  +MR DV  P+ DE  LV
Sbjct:  334 KHQSRNGLHAWQEATIDDLVGPNYVWHVQD-QNRPALDNSLKRYYGKAPAVVELCVQGGASIPDQYRSMMRLDVVPPDRDEVDLV 417

[Close]

BLAST of CV090402 vs. Vitis vinifera peptide
Match: GSVIVT01029312001 (assembled CDS)

HSP 1 Score: 156.377 bits (394), Expect = 9.780e-39
Identity = 72/89 (80.90%), Postives = 82/89 (92.13%), Query Frame = 1

Query:    1 QEYKHQMRNGQHAWQEATVDDLVPPVYVWHVRDLRDGGVLIDRLKRYYGKLPAVVELFAQAGARVGENYVGLMREDVALPELDEEKLVV 267
            Q YKHQMR+GQHAWQEATVDDL+PPV+VWHVRD++DGG L++ L+RYYGKLPAVVELFAQAGA VGENYV +MREDVA+P LDEEK VV
Sbjct:  366 QAYKHQMRDGQHAWQEATVDDLIPPVHVWHVRDVQDGGPLVNGLQRYYGKLPAVVELFAQAGANVGENYVAMMREDVAVPGLDEEKWVV 454

[Close]

BLAST of CV090402 vs. Vitis vinifera peptide
Match: GSVIVT01007874001 (assembled CDS)

HSP 1 Score: 101.293 bits (251), Expect = 3.734e-22
Identity = 51/85 (60.00%), Postives = 60/85 (70.59%), Query Frame = 1

Query:   10 KHQMRNGQHAWQEATVDDLVPPVYVWHVRDLRDGGVLIDRLKRYYGKLPAVVELFAQAGARVGENYVGLMREDVALPELDEEKLV 264
            KHQ RNG HAWQEAT+DDLV P YVWHV+D ++   L + LKRYYGK PAVVEL  Q GA + + Y  +MR DV  P+ DE  LV
Sbjct:  334 KHQSRNGLHAWQEATIDDLVGPNYVWHVQD-QNRPALDNSLKRYYGKAPAVVELCVQGGASIPDQYRSMMRLDVVPPDRDEVDLV 417

[Close]

BLAST of CV090402 vs. Vitis vinifera peptide
Match: GSVIVT01018392001 (assembled CDS)

HSP 1 Score: 98.9821 bits (245), Expect = 1.853e-21
Identity = 45/87 (51.72%), Postives = 66/87 (75.86%), Query Frame = 1

Query:    4 EYKHQMRNGQHAWQEATVDDLVPPVYVWHVRDLRDGGVLIDRLKRYYGKLPAVVELFAQAGARVGENYVGLMREDVALPELDEEKLV 264
            E+KHQ R+G+H WQ+ATV++++PP YV+H+RD + G  L   LKR+YGK PAVVE+  QAGA+V + Y  +MR D+ +P+ +E +LV
Sbjct:  358 EFKHQWRDGKHGWQDATVEEVIPPNYVYHLRDPK-GPPLRSGLKRFYGKAPAVVEVCMQAGAQVPDKYKPMMRLDIVIPDTEESRLV 443

[Close]

BLAST of CV090402 vs. Vitis vinifera peptide
Match: GSVIVT01023615001 (assembled CDS)

HSP 1 Score: 88.5817 bits (218), Expect = 2.504e-18
Identity = 45/88 (51.14%), Postives = 58/88 (65.91%), Query Frame = 1

Query:    7 YKHQMRNGQHAWQEATVDDLVPPVYVWHVRDLRDGGVLIDRLKRYYGKLPAVVELFAQAGARVGENYVGLMREDVALP-ELDEEKLVV 267
            +KHQ RNGQH WQ A ++DL+PP YVWHV    +G  L   LK +YG+ P VVE+  QAGA V E Y   MR DV +P ++ E ++VV
Sbjct:  394 HKHQQRNGQHGWQAAVLNDLIPPRYVWHV---PNGQPLQRELKNFYGQAPVVVEMCVQAGAAVPEQYKPTMRLDVGIPTDIREAEMVV 478

[Close]

BLAST of CV090402 vs. TAIR peptide
Match: AT5G61930.2 (| Symbols: APO3 | Arabidopsis thaliana protein of unknown function (DUF794) | chr5:24866230-24867665 REVERSE LENGTH=402)

HSP 1 Score: 112.079 bits (279), Expect = 3.090e-25
Identity = 52/85 (61.18%), Postives = 62/85 (72.94%), Query Frame = 1

Query:   10 KHQMRNGQHAWQEATVDDLVPPVYVWHVRDLRDGGVLIDRLKRYYGKLPAVVELFAQAGARVGENYVGLMREDVALPELDEEKLV 264
            KHQMR+G HAWQEAT+DD+V P YVWHVRD  DG VL + LKR+YGK PAV+E+  Q GA V + Y  +MR DV  P+ DE  LV
Sbjct:  317 KHQMRDGMHAWQEATIDDVVGPTYVWHVRDPTDGSVLDNSLKRFYGKAPAVIEMCVQGGAPVPDQYNSMMRLDVVYPQRDEVDLV 401

[Close]

BLAST of CV090402 vs. TAIR peptide
Match: AT5G61930.1 (| Symbols: APO3 | Arabidopsis thaliana protein of unknown function (DUF794) | chr5:24866230-24867665 REVERSE LENGTH=402)

HSP 1 Score: 112.079 bits (279), Expect = 3.090e-25
Identity = 52/85 (61.18%), Postives = 62/85 (72.94%), Query Frame = 1

Query:   10 KHQMRNGQHAWQEATVDDLVPPVYVWHVRDLRDGGVLIDRLKRYYGKLPAVVELFAQAGARVGENYVGLMREDVALPELDEEKLV 264
            KHQMR+G HAWQEAT+DD+V P YVWHVRD  DG VL + LKR+YGK PAV+E+  Q GA V + Y  +MR DV  P+ DE  LV
Sbjct:  317 KHQMRDGMHAWQEATIDDVVGPTYVWHVRDPTDGSVLDNSLKRFYGKAPAVIEMCVQGGAPVPDQYNSMMRLDVVYPQRDEVDLV 401

[Close]

BLAST of CV090402 vs. TAIR peptide
Match: AT1G64810.2 (| Symbols: APO1 | Arabidopsis thaliana protein of unknown function (DUF794) | chr1:24086810-24088276 FORWARD LENGTH=460)

HSP 1 Score: 98.9821 bits (245), Expect = 2.707e-21
Identity = 44/87 (50.57%), Postives = 62/87 (71.26%), Query Frame = 1

Query:    4 EYKHQMRNGQHAWQEATVDDLVPPVYVWHVRDLRDGGVLIDRLKRYYGKLPAVVELFAQAGARVGENYVGLMREDVALPELDEEKLV 264
            E+KHQ R+G+H WQ+A VD++ PP YVWHVRDL+ G  L   L+R+YGK PA+VE+   +GARV + Y  +MR D+ +P+  E  +V
Sbjct:  374 EFKHQWRDGKHGWQDALVDEVFPPNYVWHVRDLK-GNPLTGNLRRFYGKAPALVEICMHSGARVPQRYKAMMRLDIIVPDSQEADMV 459

[Close]

BLAST of CV090402 vs. TAIR peptide
Match: AT1G64810.1 (| Symbols: APO1 | Arabidopsis thaliana protein of unknown function (DUF794) | chr1:24086882-24088276 FORWARD LENGTH=436)

HSP 1 Score: 98.9821 bits (245), Expect = 2.707e-21
Identity = 44/87 (50.57%), Postives = 62/87 (71.26%), Query Frame = 1

Query:    4 EYKHQMRNGQHAWQEATVDDLVPPVYVWHVRDLRDGGVLIDRLKRYYGKLPAVVELFAQAGARVGENYVGLMREDVALPELDEEKLV 264
            E+KHQ R+G+H WQ+A VD++ PP YVWHVRDL+ G  L   L+R+YGK PA+VE+   +GARV + Y  +MR D+ +P+  E  +V
Sbjct:  350 EFKHQWRDGKHGWQDALVDEVFPPNYVWHVRDLK-GNPLTGNLRRFYGKAPALVEICMHSGARVPQRYKAMMRLDIIVPDSQEADMV 435

[Close]

BLAST of CV090402 vs. TAIR peptide
Match: AT5G57930.2 (| Symbols: APO2 | Arabidopsis thaliana protein of unknown function (DUF794) | chr5:23454690-23456354 FORWARD LENGTH=443)

HSP 1 Score: 93.2041 bits (230), Expect = 1.485e-19
Identity = 46/88 (52.27%), Postives = 62/88 (70.45%), Query Frame = 1

Query:    7 YKHQMRNGQHAWQEATVDDLVPPVYVWHVRDLRDGGVLIDRLKRYYGKLPAVVELFAQAGARVGENYVGLMREDVALP-ELDEEKLVV 267
            +KHQ RNGQH WQ A +DDL+PP YVWHV D+ +G  +   L+ +YG+ PAVVE+ AQAGA V E+Y   MR +V +P  + E ++VV
Sbjct:  357 FKHQQRNGQHGWQSAVLDDLIPPRYVWHVPDV-NGPPMQRELRSFYGQAPAVVEICAQAGAVVPEHYRATMRLEVGIPSSVKEAEMVV 443

[Close]

BLAST of CV090402 vs. TAIR peptide
Match: AT5G57930.1 (| Symbols: APO2, emb1629 | Arabidopsis thaliana protein of unknown function (DUF794) | chr5:23454690-23456354 FORWARD LENGTH=440)

HSP 1 Score: 93.2041 bits (230), Expect = 1.485e-19
Identity = 46/88 (52.27%), Postives = 62/88 (70.45%), Query Frame = 1

Query:    7 YKHQMRNGQHAWQEATVDDLVPPVYVWHVRDLRDGGVLIDRLKRYYGKLPAVVELFAQAGARVGENYVGLMREDVALP-ELDEEKLVV 267
            +KHQ RNGQH WQ A +DDL+PP YVWHV D+ +G  +   L+ +YG+ PAVVE+ AQAGA V E+Y   MR +V +P  + E ++VV
Sbjct:  354 FKHQQRNGQHGWQSAVLDDLIPPRYVWHVPDV-NGPPMQRELRSFYGQAPAVVEICAQAGAVVPEHYRATMRLEVGIPSSVKEAEMVV 440

[Close]

BLAST of CV090402 vs. TAIR peptide
Match: AT3G21740.1 (| Symbols: APO4 | Arabidopsis thaliana protein of unknown function (DUF794) | chr3:7662542-7663638 REVERSE LENGTH=337)

HSP 1 Score: 58.5362 bits (140), Expect = 4.054e-9
Identity = 30/72 (41.67%), Postives = 42/72 (58.33%), Query Frame = 1

Query:    7 YKHQMRNGQHAWQEATVDDLVPPVYVWHVRDLRDGGVLIDRLKRYYGKLPAVVELFAQAGARVGENYVGLMR 222
            +K++   G H W++A V+DLVP   VWH R  +D  VL+D  + YYG  PA+V L +  GA V   Y   M+
Sbjct:  250 FKYESWRGTHYWEKAGVNDLVPEKMVWHRRP-QDPVVLVDEGRSYYGHAPAIVSLCSHTGAIVPVKYACKMK 320

The following BLAST results are available for this feature:

BLAST of CV090402 vs. DB:swissprot:display
BLAST of CV090402 vs. Populus trichocarpa peptide v2.0
BLAST of CV090402 vs. P. persica 1.0 peptide
BLAST of CV090402 vs. TrEMBL
BLAST of CV090402 vs. Vitis vinifera peptide
BLAST of CV090402 vs. TAIR peptide

BLAST of CV090402 vs. DB:swissprot:display
Analysis Date: 2011-01-18 (BLAST: Vaccinium corymbosum unigene v1 vs Swissprot)
Total hits: 4


Match Name	E-value	Identity	Description
APO3_ARATH	3.041e-24	61.18	APO protein 3, mitochondrial OS=Arabidopsis thalia...	[more]
APO1_ARATH	2.664e-20	50.57	APO protein 1, chloroplastic OS=Arabidopsis thalia...	[more]
APO2_ARATH	1.462e-18	52.27	APO protein 2, chloroplastic OS=Arabidopsis thalia...	[more]
APO4_ARATH	3.991e-8	41.67	APO protein 4, mitochondrial OS=Arabidopsis thalia...	[more]

BLAST of CV090402 vs. Populus trichocarpa peptide v2.0
Analysis Date: 2011-01-18 (BLAST: Vaccinium corymbosum unigene v1 vs Populus trichocarpa v2.0 peptide)
Total hits: 6


Match Name	E-value	Identity
POPTR_0015s11750.2	7.323e-23	63.53	[more]
POPTR_0015s11750.1	7.323e-23	63.53	[more]
POPTR_0016s00340.1	1.804e-21	56.98	[more]
POPTR_0006s19750.1	1.688e-19	51.14	[more]
POPTR_0018s11560.1	2.438e-18	51.81	[more]
POPTR_0017s06490.1	1.751e-8	40.28	[more]

BLAST of CV090402 vs. P. persica 1.0 peptide
Analysis Date: 2011-01-18 (BLAST: Vaccinium corymbosum unigene v1 vs Ppersica v1.0 peptide)
Total hits: 5


Match Name	E-value	Identity
ppa006172m	7.462e-22	62.35	[more]
ppa005803m	2.171e-21	50.57	[more]
ppa005668m	5.912e-19	51.14	[more]
ppa008702m	1.320e-10	45.83	[more]
ppa007230m	1.460e-9	49.23	[more]

BLAST of CV090402 vs. TrEMBL
Analysis Date: 2011-01-18 (BLAST: Vaccinium corymbosum unigene v1 vs TrEMBL)
Total hits: 10


Match Name	E-value	Identity	Description
D7SQI0\|D7SQI0_VITVI	2.101e-36	80.90	Whole genome shotgun sequence of line PN40024, sca...	[more]
B9RX46\|B9RX46_RICCO	6.327e-33	74.16	APO protein 3, mitochondrial, putative OS=Ricinus ...	[more]
D7MKP1\|D7MKP1_ARALY	7.752e-23	61.18	Putative uncharacterized protein (Fragment) OS=Ara...	[more]
A9RU73\|A9RU73_PHYPA	1.462e-21	58.14	Predicted protein OS=Physcomitrella patens subsp. ...	[more]
D5A9B9\|D5A9B9_PICSI	4.254e-21	55.68	Putative uncharacterized protein OS=Picea sitchens...	[more]
B9IFL1\|B9IFL1_POPTR	9.476e-21	63.53	Predicted protein OS=Populus trichocarpa GN=POPTRD...	[more]
B9S4A8\|B9S4A8_RICCO	1.238e-20	55.17	APO protein 3, mitochondrial, putative OS=Ricinus ...	[more]
C5XUW1\|C5XUW1_SORBI	3.601e-20	63.22	Putative uncharacterized protein Sb04g022910 OS=So...	[more]
B9RA65\|B9RA65_RICCO	4.703e-20	61.18	Translation factor sui1, putative OS=Ricinus commu...	[more]
D7SI18\|D7SI18_VITVI	8.022e-20	60.00	Whole genome shotgun sequence of line PN40024, sca...	[more]

BLAST of CV090402 vs. Vitis vinifera peptide
Analysis Date: 2011-01-25 (BLAST: Vaccinium corymbosum unigene v1 vs Vitis vinifera peptide)
Total hits: 4


Match Name	E-value	Identity	Description
GSVIVT01029312001	9.780e-39	80.90	assembled CDS	[more]
GSVIVT01007874001	3.734e-22	60.00	assembled CDS	[more]
GSVIVT01018392001	1.853e-21	51.72	assembled CDS	[more]
GSVIVT01023615001	2.504e-18	51.14	assembled CDS	[more]

BLAST of CV090402 vs. TAIR peptide
Analysis Date: 2011-02-10 (BLAST: Vaccinium corymbosum unigene v1 vs TAIR 10 peptide)
Total hits: 7


Match Name	E-value	Identity	Description
AT5G61930.2	3.090e-25	61.18	\| Symbols: APO3 \| Arabidopsis thaliana protein of ...	[more]
AT5G61930.1	3.090e-25	61.18	\| Symbols: APO3 \| Arabidopsis thaliana protein of ...	[more]
AT1G64810.2	2.707e-21	50.57	\| Symbols: APO1 \| Arabidopsis thaliana protein of ...	[more]
AT1G64810.1	2.707e-21	50.57	\| Symbols: APO1 \| Arabidopsis thaliana protein of ...	[more]
AT5G57930.2	1.485e-19	52.27	\| Symbols: APO2 \| Arabidopsis thaliana protein of ...	[more]
AT5G57930.1	1.485e-19	52.27	\| Symbols: APO2, emb1629 \| Arabidopsis thaliana pr...	[more]
AT3G21740.1	4.054e-9	41.67	\| Symbols: APO4 \| Arabidopsis thaliana protein of ...	[more]

InterPro

Analysis Name: InterProScan analysis for Vaccinium corymbosum unigene v1
Date Performed: 2011-01-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008512	APO protein, plant	PFAM	PF05634	DUF794	coord: 2..89 score: 1.2
None	No IPR available	PANTHER	PTHR10388	TRANSLATION FACTOR SUI1	coord: 2..87 score: 9.3
None	No IPR available	PANTHER	PTHR10388:SF3	UNCHARACTERIZED	coord: 2..87 score: 9.3
None	No IPR available	PROFILE	PS51499	APO	coord: 1..67 score: 17

Properties


Property Name	Value
Singlet in analysis	Vaccinium corymbosum unigene v1

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>CV090402 ID=CV090402; Name=CV090402; organism=Vaccinium corymbosum; type=EST; length=707bp
CAAGAATACAAGCATCAGATGAGGAACGGGCAACATGCCTGGCAGGAGGC
AACAGTTGACGATCTTGTCCCTCCTGTGTATGTGTGGCACGTTCGAGATC
TGCGGGATGGTGGGGTACTGATAGATAGGTTGAAGAGGTACTACGGAAAG
TTGCCGGCAGTGGTGGAGCTGTTTGCCCAGGCTGGGGCCCGTGTGGGGGA
AAATTACGTTGGTCTGATGAGGGAAGATGTTGCATTGCCCGAACTTGATG
AAGAAAAATTGGTTGTATGAAATTATCACAGGATTGTCGTCCAGATGCTG
GGATTTAGATGTATTTCTATAGAGCAGGTTCATAGATTCAGCAATTCTGG
TCATTTTGAGATATCTTCGAGCATGGTTCACGCGGAGGACAAATTAAGAG
CGCATGATGAAGCTTCAGCAGTTTCCTTTCGACTGGTGGCTGTGGTGGAG
TTGTTCATTAAAGTGACTAATTTTGGCAAAAAGTTGGTTATAGTGATATT
GTTGAGGCATGAATTGGTTTTAGTTGTCTGTCGGAAATTGTTCTGTCCCC
TTGTTCTGGTAATGCGGGGAGATGGATTCAAGGGTAAGCCGAAGATGCAG
ATTGTATGTTTCGGACCAGAACAACATAGAATCATTTAATCCGCGATGAA
GAGACTTTGAGGTACACACTGTGGTAATGCCTGCGATTGCAGCCTTTATT
GGGGTTT

Annotated Terms

The following terms have been associated with this EST:

Vocabulary: **INTERPRO**
Term	Definition
IPR008512	APO protein, plant
noIPR	unintegrated