CV090774

EST Overview
NameCV090774
Unique NameCV090774
TypeEST
OrganismVaccinium corymbosum (northern highbush blueberry)
Sequence length717
Libraries
Library NameType
LIBEST_014530 cDNA cold acclimated Bluecrop librarycdna_library
Unigenes
This EST is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Vaccinium corymbosum unigene v1EST
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
Vaccinium corymbosum unigene v12011-01-18
BLAST: Vaccinium corymbosum unigene v1 vs Ppersica v1.0 peptide2011-01-18
BLAST: Vaccinium corymbosum unigene v1 vs Vitis vinifera peptide2011-01-25
InterProScan analysis for Vaccinium corymbosum unigene v12011-01-18
Homology
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BLAST of CV090774 vs. P. persica 1.0 peptide
Match: ppa021248m ()

HSP 1 Score: 53.9138 bits (128), Expect = 8.240e-8
Identity = 22/29 (75.86%), Postives = 25/29 (86.21%), Query Frame = 1 
Query:  238 KIEAPRFVDFTAPDH*RPDDRCWFCLRMG 324
            KIEAP+FVDFT PD  RPDDR WFC+R+G
Sbjct:   22 KIEAPKFVDFTGPDPYRPDDRYWFCMRVG 50
[Close]
BLAST of CV090774 vs. Vitis vinifera peptide
Match: GSVIVT01036969001 (assembled CDS)

HSP 1 Score: 53.9138 bits (128), Expect = 7.031e-8
Identity = 23/29 (79.31%), Postives = 25/29 (86.21%), Query Frame = 1 
Query:  238 KIEAPRFVDFTAPDH*RPDDRCWFCLRMG 324
            KIEAP+FVDFT PD  RPDDR WFCLR+G
Sbjct:   17 KIEAPKFVDFTKPDLPRPDDRYWFCLRVG 45
The following BLAST results are available for this feature:
BLAST of CV090774 vs. P. persica 1.0 peptide
Analysis Date: 2011-01-18 (BLAST: Vaccinium corymbosum unigene v1 vs Ppersica v1.0 peptide)
Total hits: 1
Match NameE-valueIdentityDescription
ppa021248m8.240e-875.86[more]
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BLAST of CV090774 vs. Vitis vinifera peptide
Analysis Date: 2011-01-25 (BLAST: Vaccinium corymbosum unigene v1 vs Vitis vinifera peptide)
Total hits: 1
Match NameE-valueIdentityDescription
GSVIVT010369690017.031e-879.31assembled CDS[more]
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InterPro
Analysis Name: InterProScan analysis for Vaccinium corymbosum unigene v1
Date Performed: 2011-01-18
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSEGsegsegcoord: 65..79
score
NoneNo IPR availableSEGsegsegcoord: 3..17
score
NoneNo IPR availableSEGsegsegcoord: 73..87
score
NoneNo IPR availableSEGsegsegcoord: 2..14
score

Properties
Property NameValue
Singlet in analysisVaccinium corymbosum unigene v1
Sequences
The following sequences are available for this feature:

EST sequence

>CV090774 ID=CV090774; Name=CV090774; organism=Vaccinium corymbosum; type=EST; length=717bp
CGAAAATACAATTCCTTGAGAGATGATTTCGAAGCCAGGATTGATCTGGA
AGCCGGAAGGGTGGGGCGAGAGGCGACCGACGAGGGCGATTCGAAAGAGC
GAAGTGTTAGCGACGATTGGTCTAATGGTTCTATTCCATGGACTGCAAAA
ATGGAGGAAAAACTCGAACATTCGAGCCAGTTGATCACCAACGACGAAGA
AGAAAGAGGAGGGCTTGACGGGGAAGAGTACTACGAGAAGATTGAAGCAC
CTAGGTTCGTTGACTTCACTGCTCCAGATCACTAGAGACCCGACGATCGC
TGCTGGTTCTGCCTTCGAATGGGTTATCTGGCTGTTGAGCGCGAGTATGG
GGCTTAATCCCATTTCAGAAAACATTATATGGAGGGAGCATGATGGGATC
AGGAGACCAAGCTTTATACTTATGTGGCAATCAAAGGCCCTCAAGATCTG
CTATGTCTTCCAATCTGCCACAAGCTTATCTGGTCACTCAAATAGTTATA
TCATTTGGGGGGCTATAAAATGCCTTAAGAATGGGCTGGGGCGTATGACT
GGTGAGTAGAGAAACGTTTTGTAGCTAACTCTCCCTAAAGTTGAGGGAAA
GAAGACACAAAGATCCCCTGCCAATGTAACGAGTTTACTCTGGGGCAATT
TGTGGCAGGAATCGTTTTGGGTTGCGGTTTTCTTTCTGCGATGTTTTTCT
TTGGTGCTTAAACTTCC
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Annotated Terms
The following terms have been associated with this EST:
Vocabulary: INTERPRO
TermDefinition
noIPRunintegrated