CV090842 | GDV

EST Overview


Name	CV090842
Unique Name	CV090842
Type	EST
Organism	Vaccinium corymbosum (northern highbush blueberry)
Sequence length	583

Libraries


Library Name	Type
LIBEST_014530 cDNA cold acclimated Bluecrop library	cdna_library

Unigenes

This EST is part of the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
	Vaccinium corymbosum unigene v1	EST

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
Vaccinium corymbosum unigene v1	2011-01-18
BLAST: Vaccinium corymbosum unigene v1 vs Ppersica v1.0 peptide	2011-01-18
BLAST: Vaccinium corymbosum unigene v1 vs Swissprot	2011-01-18
BLAST: Vaccinium corymbosum unigene v1 vs Populus trichocarpa v2.0 peptide	2011-01-18
BLAST: Vaccinium corymbosum unigene v1 vs TrEMBL	2011-01-18
BLAST: Vaccinium corymbosum unigene v1 vs Vitis vinifera peptide	2011-01-25
BLAST: Vaccinium corymbosum unigene v1 vs TAIR 10 peptide	2011-02-10
InterProScan analysis for Vaccinium corymbosum unigene v1	2011-01-18

Homology

[Close]

BLAST of CV090842 vs. DB:swissprot:display
Match: TRM6_DICDI (tRNA (adenine-N(1)-)-methyltransferase non-catalytic subunit trm6 OS=Dictyostelium discoideum GN=trmt6 PE=3 SV=1)

HSP 1 Score: 108.997 bits (271), Expect = 1.767e-23
Identity = 58/147 (39.46%), Postives = 94/147 (63.95%), Query Frame = 3

Query:    9 EDIDSMRRQGATGDEIVQALIANSATFEKKTSFSQEKYRLKKQKKYAPKVLLRRPFTRSICETYFKKYPARIGFLRVDTLSLLLSMGNVGAHSDVLVVDMVGGILTGAVAERLGGY--VCNTYLGLTPYPVDIVRMFNFSSETCRRI 443
            EDI+ M+++G   + I++ ++ NS +F+ KTSFSQ KY  KK KKY+  V + +P  +S+ E Y+KK   +I  LR D+   LL++GN+ A+S VLVV+   G++TG++AER+ G   + + Y+G  P  + IV  F F+++    I
Sbjct:  132 EDINEMKQKGTDSNTIIKTIVENSESFKTKTSFSQIKYLKKKIKKYSTIVKIIKPTLKSLTEAYYKKDSRKICGLRFDSFGQLLTLGNIRANSQVLVVETCMGLVTGSIAERMNGQGTILSAYIGKGP-SLSIVNNFGFNTDVLNTI 277

[Close]

BLAST of CV090842 vs. DB:swissprot:display
Match: TRM6_MOUSE (tRNA (adenine-N(1)-)-methyltransferase non-catalytic subunit TRM6 OS=Mus musculus GN=Trmt6 PE=1 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 5.684e-22
Identity = 48/116 (41.38%), Postives = 79/116 (68.10%), Query Frame = 3

Query:    9 EDIDSMRRQGATGDEIVQALIANSATFEKKTSFSQEKYRLKKQKKYAPKVLLRRPFTRSICETYFKKYPARIGFLRVDTLSLLLSMGNVGAHSDVLVVDMVGGILTGAVAERLGGY 356
            +DI +++ +G  G+EIVQ LI NS TF  KT F+Q+KY  KK+KKY   V + +P TR +   Y+ + P +I  +R DTL+ +L++GN+ A + ++V++   G++ GA+ ER+GG+
Sbjct:  110 DDIKALKDKGIKGEEIVQQLIENSTTFRDKTEFAQDKYIKKKKKKYEAIVTILKPSTRILSIMYYAREPGKINHMRYDTLAQMLTLGNIRAGNKMIVMETCSGLVLGAMMERMGGF 225

[Close]

BLAST of CV090842 vs. DB:swissprot:display
Match: TRM6_BOVIN (tRNA (adenine-N(1)-)-methyltransferase non-catalytic subunit TRM6 OS=Bos taurus GN=TRMT6 PE=2 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 5.684e-22
Identity = 47/116 (40.52%), Postives = 79/116 (68.10%), Query Frame = 3

Query:    9 EDIDSMRRQGATGDEIVQALIANSATFEKKTSFSQEKYRLKKQKKYAPKVLLRRPFTRSICETYFKKYPARIGFLRVDTLSLLLSMGNVGAHSDVLVVDMVGGILTGAVAERLGGY 356
            +DI +++ +G  G+EIVQ LI NS TF  KT F+Q+KY  KK+KKY   + + +P TR +   Y+ + P +I  +R DTL+ +L++GN+ A + ++V++   G++ GA+ ER+GG+
Sbjct:  109 DDIKALKDKGIKGEEIVQQLIENSTTFRDKTEFAQDKYIKKKKKKYEAMITVVKPSTRILSVMYYAREPGKINHMRYDTLAQMLTLGNIRAGNKMIVMETCAGLVLGAMMERMGGF 224

[Close]

BLAST of CV090842 vs. DB:swissprot:display
Match: TRM6_HUMAN (tRNA (adenine-N(1)-)-methyltransferase non-catalytic subunit TRM6 OS=Homo sapiens GN=TRMT6 PE=1 SV=1)

HSP 1 Score: 102.834 bits (255), Expect = 1.266e-21
Identity = 47/116 (40.52%), Postives = 79/116 (68.10%), Query Frame = 3

Query:    9 EDIDSMRRQGATGDEIVQALIANSATFEKKTSFSQEKYRLKKQKKYAPKVLLRRPFTRSICETYFKKYPARIGFLRVDTLSLLLSMGNVGAHSDVLVVDMVGGILTGAVAERLGGY 356
            +DI +++ +G  G+EIVQ LI NS TF  KT F+Q+KY  KK+KKY   + + +P TR +   Y+ + P +I  +R DTL+ +L++GN+ A + ++V++   G++ GA+ ER+GG+
Sbjct:  109 DDIKALKDKGIKGEEIVQQLIENSTTFRDKTEFAQDKYIKKKKKKYEAIITVVKPSTRILSIMYYAREPGKINHMRYDTLAQMLTLGNIRAGNKMIVMETCAGLVLGAMMERMGGF 224

[Close]

BLAST of CV090842 vs. DB:swissprot:display
Match: TRM6_CRYNE (tRNA (adenine-N(1)-)-methyltransferase non-catalytic subunit TRM6 OS=Cryptococcus neoformans GN=TRM6 PE=3 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 9.390e-17
Identity = 51/116 (43.97%), Postives = 68/116 (58.62%), Query Frame = 3

Query:    3 SGEDIDSMRRQGATGDEIVQALIANSATFEKKTSFSQEKYRLKKQKKYAPKVLLRRPFTRSICETYFKKYPARIGFLRVDTLSLLLSMGNVGAHSDVLVVDMVGGILTGAVAERLG 350
            S ++I  +R QG T +EI+QA IA    F  KT FS+EK+R +K+KK+   V    P   ++   Y  + P  I  LR DTLS LL+M NV      LVVD  GG++T AV ER+G
Sbjct:  213 SHDEIAELRAQGCTPEEIIQAQIARHEKFGLKTDFSKEKWRRRKEKKFYQTVQPLAPSIPNVLYHYNLRSPQSILHLRDDTLSQLLTMANVRPGGRYLVVDDTGGLITAAVLERMG 328

[Close]

BLAST of CV090842 vs. DB:swissprot:display
Match: TRM6_DEBHA (tRNA (adenine-N(1)-)-methyltransferase non-catalytic subunit TRM6 OS=Debaryomyces hansenii GN=TRM6 PE=3 SV=2)

HSP 1 Score: 76.2554 bits (186), Expect = 1.269e-13
Identity = 41/120 (34.17%), Postives = 68/120 (56.67%), Query Frame = 3

Query:    3 SGEDIDSMRRQGATGD---EIVQALIANSATFEKKTSFSQEKYRLKKQKKYAPKVLLRRPFTRSICETYFKKYPARIGFLRVDTLSLLLSMGNVGAHSDVLVVDMVGGILTGAVAERLGG 353
            + ED+D ++  GAT D    I++ +IA    F+KKT FSQ+KY  +KQ+K+  +  +    +  + + Y +K   R+  +  +TL LLL+  NV      L++D  GGI+  A+ ER+ G
Sbjct:  138 TSEDVDKLKESGATSDIGQRIIEQMIAGHEGFDKKTLFSQQKYLKRKQQKFLRRFTVEYLGSSQLLQYYIEKDTQRVLDMSEETLGLLLNYANVRPGGKYLLIDETGGIILYAMMERMNG 257

[Close]

BLAST of CV090842 vs. DB:swissprot:display
Match: TRM6_CANAL (tRNA (adenine-N(1)-)-methyltransferase non-catalytic subunit TRM6 OS=Candida albicans GN=TRM6 PE=3 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 3.693e-13
Identity = 42/118 (35.59%), Postives = 69/118 (58.47%), Query Frame = 3

Query:    3 SGEDIDSMRRQGAT---GDEIVQALIANSATFEKKTSFSQEKYRLKKQKKYAPKVLLRRPFTRSICETYFKKYPARIGFLRVDTLSLLLSMGNVGAHSDVLVVDMVGGILTGAVAERL 347
            S +DID +++ GA+   G  I++ +IA    F+KKT FSQ+KY  +KQ+K+  +  +       + + Y +K   R+  L V+TL L+L+  NV      L++D  GG+LT A+ ER+
Sbjct:  115 SKDDIDELKKSGASSNVGQMIIEKMIAGHEGFDKKTIFSQQKYLKRKQQKFLRRFTVDYLGGSELLQYYIEKDLNRVLDLSVETLGLMLTYSNVRPGGKYLIIDETGGVLTYAMMERM 232

[Close]

BLAST of CV090842 vs. DB:swissprot:display
Match: TRM6_SCHPO (tRNA (adenine-N(1)-)-methyltransferase non-catalytic subunit trm6 OS=Schizosaccharomyces pombe GN=gcd10 PE=2 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 9.095e-12
Identity = 40/119 (33.61%), Postives = 65/119 (54.62%), Query Frame = 3

Query:    9 EDIDSMRRQ----GATGDEIVQALIANSATFEKKTSFSQEKYRLKKQKKYAPKVLLRRPFTRSICETYFKKYPARIGFLRVDTLSLLLSMGNVGAHSDVLVVDMVGGILTGAVAERLGG 353
            E+ID +R      G   +E ++ L  +S TFE+KT F+QEKY  +K +KY  +  + RP    +     +  P +I  L  + +SL+L++GNV      LVVD  G +  G++ +R+ G
Sbjct:   97 EEIDELRANIKAGGLRAEEAIKQLTNSSKTFEQKTLFAQEKYVTRKGEKYLQRFQVLRPCVEVVANYMIEHDPYKILDLTAECISLMLTLGNVKPGGRYLVVDETGCMFLGSLIDRVAG 215

[Close]

BLAST of CV090842 vs. DB:swissprot:display
Match: TRM6_YARLI (tRNA (adenine-N(1)-)-methyltransferase non-catalytic subunit TRM6 OS=Yarrowia lipolytica GN=TRM6 PE=3 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 4.514e-11
Identity = 39/115 (33.91%), Postives = 66/115 (57.39%), Query Frame = 3

Query:   12 DIDSMRRQGA-TGDEIVQALIANSATFEKKTSFSQEKYRLKKQKKYAPKVLLRRPFTRSICETYFKKYPARIGFLRVDTLSLLLSMGNVGAHSDVLVVDMVGGILTGAVAERLGG 353
            +I+ M++Q   +G +I+  +I     F KKT+FS+EKY  +K++KY  +   +   +  + + Y +K   ++  +  + L+LLLSM NV      LVVD   G+LT A+ ER+ G
Sbjct:  136 EIEEMKKQKTLSGKDIIDHVIKGHNEFHKKTAFSKEKYLRRKEQKYLRRFTPQPMCSSLLLDFYLEKDYKKVLDMSQEMLALLLSMANVRPGGKYLVVDETTGVLTAALMERMAG 250

[Close]

BLAST of CV090842 vs. DB:swissprot:display
Match: TRM6_KLULA (tRNA (adenine-N(1)-)-methyltransferase non-catalytic subunit TRM6 OS=Kluyveromyces lactis GN=TRM6 PE=3 SV=1)

HSP 1 Score: 61.2326 bits (147), Expect = 4.225e-9
Identity = 31/113 (27.43%), Postives = 65/113 (57.52%), Query Frame = 3

Query:   12 DIDSMRRQGATGDEIVQALIANSATFEKKTSFSQEKYRLKKQKKYAPKVLLRRPFTRSICETYFKKYPA-RIGFLRVDTLSLLLSMGNVGAHSDVLVVDMVGGILTGAVAERL 347
            +I++M+R+ A+GD I+  +I +  +F +KT  SQEKY  +K++K+A    +    +  +     +K    R+  +  ++L + L++ N+ ++   L +D  GG++  A+ ER+
Sbjct:  121 EIEAMKREAASGDAIISKMIESHKSFHQKTVHSQEKYLKRKKQKFAKFFTVEYLDSSGLLHYLIEKGDVLRVMDISQESLGMALNLANINSNGQYLCIDETGGLIVYAMLERM 233

[Close]

BLAST of CV090842 vs. Populus trichocarpa peptide v2.0
Match: POPTR_0005s25940.1 ()

HSP 1 Score: 250.366 bits (638), Expect = 5.893e-67
Identity = 125/162 (77.16%), Postives = 140/162 (86.42%), Query Frame = 3

Query:    3 SGEDIDSMRRQGATGDEIVQALIANSATFEKKTSFSQEKYRLKKQKKYAPKVLLRRPFTRSICETYFKKYPARIGFLRVDTLSLLLSMGNVGAHSDVLVVDMVGGILTGAVAERLG--GYVCNTYLGLTPYPVDIVRMFNFSSETCRRIVRCSLTDLCCSQT 482
            + EDID MRRQGA GDEI++ALIANSATFEKKT+FSQEKYR+KKQKKYAP+VLLRRP  RSICE YFKKYP RIGFLRVD LSLLLS+ NV A+SD+L+VDMVGG+LTGAVAERLG  G VCNTYLG TP PV+IVR FNF++E C+RIVR  L DLC  QT
Sbjct:  111 TSEDIDEMRRQGAKGDEIIEALIANSATFEKKTAFSQEKYRIKKQKKYAPRVLLRRPSARSICEAYFKKYPNRIGFLRVDVLSLLLSLANVSANSDILLVDMVGGLLTGAVAERLGGTGCVCNTYLGSTPSPVEIVRTFNFNNEICKRIVRAPLHDLCSDQT 272

[Close]

BLAST of CV090842 vs. Populus trichocarpa peptide v2.0
Match: POPTR_0002s02490.2 ()

HSP 1 Score: 234.958 bits (598), Expect = 2.562e-62
Identity = 115/145 (79.31%), Postives = 129/145 (88.97%), Query Frame = 3

Query:   12 DIDSMRRQGATGDEIVQALIANSATFEKKTSFSQEKYRLKKQKKYAPKVLLRRPFTRSICETYFKKYPARIGFLRVDTLSLLLSMGNVGAHSDVLVVDMVGGILTGAVAERLG--GYVCNTYLGLTPYPVDIVRMFNFSSETCRR 440
            DID MRRQG  GDEI++ALIANSAT+EKKT+FSQEKYR+KKQKKYAP+VLLRRP  RSICE YFKKYP RIGFLRVD LSLLLS+ NV A+SD+L+VDMVGG+LTGAVAERLG  GYVCNTYLG TPYPV+IVR FNF +E C+R
Sbjct:  158 DIDEMRRQGVKGDEIIEALIANSATYEKKTTFSQEKYRIKKQKKYAPRVLLRRPSARSICEAYFKKYPHRIGFLRVDALSLLLSLANVTANSDILLVDMVGGLLTGAVAERLGGTGYVCNTYLGSTPYPVEIVRTFNFDNEICKR 302

[Close]

BLAST of CV090842 vs. Populus trichocarpa peptide v2.0
Match: POPTR_0002s02490.1 ()

HSP 1 Score: 234.958 bits (598), Expect = 2.562e-62
Identity = 115/145 (79.31%), Postives = 129/145 (88.97%), Query Frame = 3

Query:   12 DIDSMRRQGATGDEIVQALIANSATFEKKTSFSQEKYRLKKQKKYAPKVLLRRPFTRSICETYFKKYPARIGFLRVDTLSLLLSMGNVGAHSDVLVVDMVGGILTGAVAERLG--GYVCNTYLGLTPYPVDIVRMFNFSSETCRR 440
            DID MRRQG  GDEI++ALIANSAT+EKKT+FSQEKYR+KKQKKYAP+VLLRRP  RSICE YFKKYP RIGFLRVD LSLLLS+ NV A+SD+L+VDMVGG+LTGAVAERLG  GYVCNTYLG TPYPV+IVR FNF +E C+R
Sbjct:  167 DIDEMRRQGVKGDEIIEALIANSATYEKKTTFSQEKYRIKKQKKYAPRVLLRRPSARSICEAYFKKYPHRIGFLRVDALSLLLSLANVTANSDILLVDMVGGLLTGAVAERLGGTGYVCNTYLGSTPYPVEIVRTFNFDNEICKR 311

[Close]

BLAST of CV090842 vs. P. persica 1.0 peptide
Match: ppa005656m ()

HSP 1 Score: 253.062 bits (645), Expect = 6.535e-68
Identity = 129/164 (78.66%), Postives = 141/164 (85.98%), Query Frame = 3

Query:    3 SGEDIDSMRRQGATGDEIVQALIANSATFEKKTSFSQEKYRLKKQKKYAPKVLLRRPFTRSICETYFKKYPARIGFLRVDTLSLLLSMGNVGAHSDVLVVDMVGGILTGAVAERLG--GYVCNTYLGLTPYPVDIVRMFNFSSETCRRIVRCSLTDLCCSQTEL 488
            +GEDI+ MRR GATGDEIV+ALIANSATFEKKT FSQEKYRLKKQKKYAP VLLRRPFTRSICE Y KKYP RIGFLR+DTLSLLLSM NV A+SDVLVVDMVGG+LTG+VAERLG  GYVCNTY+G +PYP+DI R+FNF  E C+RIVR  LTDL   Q  L
Sbjct:  116 TGEDINEMRRLGATGDEIVEALIANSATFEKKTVFSQEKYRLKKQKKYAPIVLLRRPFTRSICEAYLKKYPTRIGFLRMDTLSLLLSMANVSANSDVLVVDMVGGLLTGSVAERLGGTGYVCNTYIGGSPYPMDIARIFNFGDEICKRIVRSPLTDLFSVQNGL 279

[Close]

BLAST of CV090842 vs. TrEMBL
Match: B9R879|B9R879_RICCO (Translation initiation factor, putative OS=Ricinus communis GN=RCOM_1597560 PE=4 SV=1)

HSP 1 Score: 261.536 bits (667), Expect = 2.972e-68
Identity = 130/157 (82.80%), Postives = 142/157 (90.45%), Query Frame = 3

Query:    3 SGEDIDSMRRQGATGDEIVQALIANSATFEKKTSFSQEKYRLKKQKKYAPKVLLRRPFTRSICETYFKKYPARIGFLRVDTLSLLLSMGNVGAHSDVLVVDMVGGILTGAVAERLG--GYVCNTYLGLTPYPVDIVRMFNFSSETCRRIVRCSLTDL 467
            +GEDID MRRQGA GDEI++ALIANS TFEKKTSFSQEKYR+KKQKKYAP+VLLRRPFTRSICE YFKKYPARIGFLRVD LSLLLSM NV A+SDVLVVDMVGG+LTGA+AERLG  GYVCNTYLG TPY  DIVRMFNF+++ C+RIVR SL DL
Sbjct:  116 TGEDIDEMRRQGAKGDEIIEALIANSTTFEKKTSFSQEKYRIKKQKKYAPRVLLRRPFTRSICEAYFKKYPARIGFLRVDALSLLLSMANVTANSDVLVVDMVGGLLTGAIAERLGGTGYVCNTYLGGTPYSTDIVRMFNFNNDACKRIVRASLNDL 272

[Close]

BLAST of CV090842 vs. TrEMBL
Match: B9H4W0|B9H4W0_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_559822 PE=4 SV=1)

HSP 1 Score: 250.366 bits (638), Expect = 6.851e-65
Identity = 125/162 (77.16%), Postives = 140/162 (86.42%), Query Frame = 3

Query:    3 SGEDIDSMRRQGATGDEIVQALIANSATFEKKTSFSQEKYRLKKQKKYAPKVLLRRPFTRSICETYFKKYPARIGFLRVDTLSLLLSMGNVGAHSDVLVVDMVGGILTGAVAERLG--GYVCNTYLGLTPYPVDIVRMFNFSSETCRRIVRCSLTDLCCSQT 482
            + EDID MRRQGA GDEI++ALIANSATFEKKT+FSQEKYR+KKQKKYAP+VLLRRP  RSICE YFKKYP RIGFLRVD LSLLLS+ NV A+SD+L+VDMVGG+LTGAVAERLG  G VCNTYLG TP PV+IVR FNF++E C+RIVR  L DLC  QT
Sbjct:  111 TSEDIDEMRRQGAKGDEIIEALIANSATFEKKTAFSQEKYRIKKQKKYAPRVLLRRPSARSICEAYFKKYPNRIGFLRVDVLSLLLSLANVSANSDILLVDMVGGLLTGAVAERLGGTGCVCNTYLGSTPSPVEIVRTFNFNNEICKRIVRAPLHDLCSDQT 272

[Close]

BLAST of CV090842 vs. TrEMBL
Match: O80846|O80846_ARATH (Expressed protein OS=Arabidopsis thaliana GN=At2g45730/F4I18.29 PE=2 SV=1)

HSP 1 Score: 239.195 bits (609), Expect = 1.579e-61
Identity = 121/179 (67.60%), Postives = 147/179 (82.12%), Query Frame = 3

Query:    3 SGEDIDSMRRQGATGDEIVQALIANSATFEKKTSFSQEKYRLKKQKKYAPKVLLRRPFTRSICETYFKKYPARIGFLRVDTLSLLLSMGNVGAHSDVLVVDMVGGILTGAVAERLG--GYVCNTYLGLTPYPVDIVRMFNFSSETCRRIVRCSLTDLCCSQT---------ELVCQSAN 506
            +GE+I++MRR+GA GDEI++ALIANS TF+KK   SQEKY+LKKQKKYAPK+LLRRPF RSICE YFKKYPARIGFLRVD LSLLL+M NV A+SDVLVVDMVGG++TGAVAERLG  GYVCNTY G +PYPV++VRMFNFS +  +RIV+ S+ +L  ++T         E VC++ N
Sbjct:  118 TGEEIEAMRREGAKGDEIIEALIANSKTFDKKFQLSQEKYKLKKQKKYAPKLLLRRPFARSICEAYFKKYPARIGFLRVDALSLLLTMANVTAYSDVLVVDMVGGLVTGAVAERLGGTGYVCNTYKGSSPYPVEMVRMFNFSDKVLKRIVQSSINELSSAKTASTEGNNQQEGVCKAEN 296

[Close]

BLAST of CV090842 vs. TrEMBL
Match: D7LD79|D7LD79_ARALY (Eukaryotic initiation factor 3 gamma subunit family protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_483709 PE=4 SV=1)

HSP 1 Score: 237.269 bits (604), Expect = 6.002e-61
Identity = 117/162 (72.22%), Postives = 138/162 (85.19%), Query Frame = 3

Query:    3 SGEDIDSMRRQGATGDEIVQALIANSATFEKKTSFSQEKYRLKKQKKYAPKVLLRRPFTRSICETYFKKYPARIGFLRVDTLSLLLSMGNVGAHSDVLVVDMVGGILTGAVAERLG--GYVCNTYLGLTPYPVDIVRMFNFSSETCRRIVRCSLTDLCCSQT 482
            +GE+I++MRR+GA GDEI++ALIANS TF+KK   SQEKY+LKKQKKYAPK+LLRRPF RSICE YFKKYPARIGFLRVD LSLLL+M NV A+SDVLVVDMVGG++TGAVAERLG  GYVCNTY G  PYPV++VRMFNFS +   RIV+ S+ +L  + T
Sbjct:  118 TGEEIEAMRREGAKGDEIIEALIANSKTFDKKFQLSQEKYKLKKQKKYAPKLLLRRPFARSICEAYFKKYPARIGFLRVDALSLLLTMANVTAYSDVLVVDMVGGLVTGAVAERLGGTGYVCNTYKGSAPYPVEMVRMFNFSDKVLERIVQSSINELSSANT 279

[Close]

BLAST of CV090842 vs. TrEMBL
Match: B9GQW0|B9GQW0_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_754037 PE=4 SV=1)

HSP 1 Score: 234.958 bits (598), Expect = 2.979e-60
Identity = 115/145 (79.31%), Postives = 129/145 (88.97%), Query Frame = 3

Query:   12 DIDSMRRQGATGDEIVQALIANSATFEKKTSFSQEKYRLKKQKKYAPKVLLRRPFTRSICETYFKKYPARIGFLRVDTLSLLLSMGNVGAHSDVLVVDMVGGILTGAVAERLG--GYVCNTYLGLTPYPVDIVRMFNFSSETCRR 440
            DID MRRQG  GDEI++ALIANSAT+EKKT+FSQEKYR+KKQKKYAP+VLLRRP  RSICE YFKKYP RIGFLRVD LSLLLS+ NV A+SD+L+VDMVGG+LTGAVAERLG  GYVCNTYLG TPYPV+IVR FNF +E C+R
Sbjct:  111 DIDEMRRQGVKGDEIIEALIANSATYEKKTTFSQEKYRIKKQKKYAPRVLLRRPSARSICEAYFKKYPHRIGFLRVDALSLLLSLANVTANSDILLVDMVGGLLTGAVAERLGGTGYVCNTYLGSTPYPVEIVRTFNFDNEICKR 255

[Close]

BLAST of CV090842 vs. TrEMBL
Match: Q7XQC2|Q7XQC2_ORYSJ (OSJNBb0021I10.2 protein OS=Oryza sativa subsp. japonica GN=OSJNBb0060M15.9 PE=2 SV=2)

HSP 1 Score: 228.409 bits (581), Expect = 2.788e-58
Identity = 115/164 (70.12%), Postives = 135/164 (82.32%), Query Frame = 3

Query:    3 SGEDIDSMRRQGATGDEIVQALIANSATFEKKTSFSQEKYRLKKQKKYAPKVLLRRPFTRSICETYFKKYPARIGFLRVDTLSLLLSMGNVGAHSDVLVVDMVGGILTGAVAERLG--GYVCNTYLGLTPYPVDIVRMFNFSSETCRRIVRCSLTDLCCSQTEL 488
            S +DI++M+R G +GDEIV+ALIANS+TF KKT FSQEKY+LKKQKKYAPKVLLRRP TRSICETYFKK PAR GF+RVD LSLLLSM NVG +SDVLVVDMVGG++ GAVAERLG  GYVC+TYLG     +DI+RM+N SS+   RIV+  L+DLC  Q  +
Sbjct:  105 SSDDIEAMKRDGVSGDEIVEALIANSSTFGKKTLFSQEKYKLKKQKKYAPKVLLRRPSTRSICETYFKKSPARTGFMRVDALSLLLSMANVGPYSDVLVVDMVGGLVVGAVAERLGGTGYVCSTYLGSAASSIDIIRMYNLSSDMTTRIVQAPLSDLCSLQNSV 268

[Close]

BLAST of CV090842 vs. TrEMBL
Match: Q01N54|Q01N54_ORYSA (OSIGBa0127D24.9 protein OS=Oryza sativa GN=OSIGBa0127D24.9 PE=4 SV=1)

HSP 1 Score: 226.483 bits (576), Expect = 1.059e-57
Identity = 114/164 (69.51%), Postives = 135/164 (82.32%), Query Frame = 3

Query:    3 SGEDIDSMRRQGATGDEIVQALIANSATFEKKTSFSQEKYRLKKQKKYAPKVLLRRPFTRSICETYFKKYPARIGFLRVDTLSLLLSMGNVGAHSDVLVVDMVGGILTGAVAERLG--GYVCNTYLGLTPYPVDIVRMFNFSSETCRRIVRCSLTDLCCSQTEL 488
            S +DI++M+R G +GDEIV+ALIANS+TF KKT FSQEKY+LKKQKKYAPKVLLRRP TRSICETYFKK PAR GF+RVD LSLLLSM NVG +SDVLVVDMVGG++ GAVAERLG  GYVC+TYLG     +DI+RM+N SS+   RIV+  L++LC  Q  +
Sbjct:  105 SSDDIEAMKRDGVSGDEIVEALIANSSTFGKKTLFSQEKYKLKKQKKYAPKVLLRRPSTRSICETYFKKSPARTGFMRVDALSLLLSMANVGPYSDVLVVDMVGGLVVGAVAERLGGTGYVCSTYLGSAASSIDIIRMYNLSSDMTTRIVQAPLSNLCSLQNSV 268

[Close]

BLAST of CV090842 vs. TrEMBL
Match: C5XH01|C5XH01_SORBI (Putative uncharacterized protein Sb03g044640 OS=Sorghum bicolor GN=Sb03g044640 PE=4 SV=1)

HSP 1 Score: 218.394 bits (555), Expect = 2.885e-55
Identity = 112/167 (67.07%), Postives = 132/167 (79.04%), Query Frame = 3

Query:    3 SGEDIDSMRRQGATGDEIVQALIANSATFEKKTSFSQEKYRLKKQKKYAPKVLLRRPF---------TRSICETYFKKYPARIGFLRVDTLSLLLSMGNVGAHSDVLVVDMVGGILTGAVAERLG--GYVCNTYLGLTPYPVDIVRMFNFSSETCRRIVRCSLTDLC 470
            S +DI++M+R GATGDEIV+ALIANS+TF  KT FSQEKY+LKKQKKYAPK     PF         ++ ICETYFKK PARIGF+RVDTLSLLLSM N+GA+SDVLVVDMVGG++ GAVAERLG  GYVC+TYLG  P  +DI+RMFN SS+   RIV+  L+DLC
Sbjct:  111 SSDDIEAMKRDGATGDEIVEALIANSSTFGNKTVFSQEKYKLKKQKKYAPKSSFATPFCSKVSCNMLSKDICETYFKKTPARIGFMRVDTLSLLLSMANIGAYSDVLVVDMVGGLVVGAVAERLGGTGYVCSTYLGSAPCSIDIIRMFNLSSDMVSRIVQAPLSDLC 277

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BLAST of CV090842 vs. TrEMBL
Match: B9FD30|B9FD30_ORYSJ (Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_13552 PE=4 SV=1)

HSP 1 Score: 214.927 bits (546), Expect = 3.190e-54
Identity = 108/148 (72.97%), Postives = 125/148 (84.46%), Query Frame = 3

Query:    3 SGEDIDSMRRQGATGDEIVQALIANSATFEKKTSFSQEKYRLKKQKKYAPKVLLRRPFTRSICETYFKKYPARIGFLRVDTLSLLLSMGNVGAHSDVLVVDMVGGILTGAVAERLG--GYVCNTYLGLTPYPVDIVRMFNFSSETCRR 440
            S +DI++M+R G +GDEIV+ALIANS+TF KKT FSQEKY+LKKQKKYAPKVLLRRP TRSICETYFKK PAR GF+RVD LSLLLSM NVG +SDVLVVDMVGG++ GAVAERLG  GYVC+TYLG     +DI+RM+N SS+   R
Sbjct:  105 SSDDIEAMKRDGVSGDEIVEALIANSSTFGKKTLFSQEKYKLKKQKKYAPKVLLRRPSTRSICETYFKKSPARTGFMRVDALSLLLSMANVGPYSDVLVVDMVGGLVVGAVAERLGGTGYVCSTYLGSAASSIDIIRMYNLSSDMTTR 252

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BLAST of CV090842 vs. TrEMBL
Match: B8AUA4|B8AUA4_ORYSI (Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_14608 PE=4 SV=1)

HSP 1 Score: 214.927 bits (546), Expect = 3.190e-54
Identity = 108/148 (72.97%), Postives = 125/148 (84.46%), Query Frame = 3

Query:    3 SGEDIDSMRRQGATGDEIVQALIANSATFEKKTSFSQEKYRLKKQKKYAPKVLLRRPFTRSICETYFKKYPARIGFLRVDTLSLLLSMGNVGAHSDVLVVDMVGGILTGAVAERLG--GYVCNTYLGLTPYPVDIVRMFNFSSETCRR 440
            S +DI++M+R G +GDEIV+ALIANS+TF KKT FSQEKY+LKKQKKYAPKVLLRRP TRSICETYFKK PAR GF+RVD LSLLLSM NVG +SDVLVVDMVGG++ GAVAERLG  GYVC+TYLG     +DI+RM+N SS+   R
Sbjct:  105 SSDDIEAMKRDGVSGDEIVEALIANSSTFGKKTLFSQEKYKLKKQKKYAPKVLLRRPSTRSICETYFKKSPARTGFMRVDALSLLLSMANVGPYSDVLVVDMVGGLVVGAVAERLGGTGYVCSTYLGSAASSIDIIRMYNLSSDMTTR 252

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BLAST of CV090842 vs. Vitis vinifera peptide
Match: GSVIVT01009891001 (assembled CDS)

HSP 1 Score: 262.692 bits (670), Expect = 7.064e-71
Identity = 131/157 (83.44%), Postives = 143/157 (91.08%), Query Frame = 3

Query:    3 SGEDIDSMRRQGATGDEIVQALIANSATFEKKTSFSQEKYRLKKQKKYAPKVLLRRPFTRSICETYFKKYPARIGFLRVDTLSLLLSMGNVGAHSDVLVVDMVGGILTGAVAERLG--GYVCNTYLGLTPYPVDIVRMFNFSSETCRRIVRCSLTDL 467
            +GEDID MRRQGATGDEIV+ALI+NSAT+EKKTSFSQEKYRLKKQKKY+P+VLLRRPF RSICE YFKKYPARIGFLRVDTLSLLLSM N+ AHSDVLVVDMVGG+LTGAVAERLG  GYVCN YLG TPYP+DIVR+FNFSSE C+RIVR  +  L
Sbjct:  116 TGEDIDEMRRQGATGDEIVEALISNSATYEKKTSFSQEKYRLKKQKKYSPRVLLRRPFCRSICEAYFKKYPARIGFLRVDTLSLLLSMANIAAHSDVLVVDMVGGLLTGAVAERLGGTGYVCNAYLGDTPYPMDIVRIFNFSSEICKRIVRSPVDGL 272

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BLAST of CV090842 vs. TAIR peptide
Match: AT2G45730.1 (| Symbols: | eukaryotic initiation factor 3 gamma subunit family protein | chr2:18836519-18839123 REVERSE LENGTH=446)

HSP 1 Score: 239.195 bits (609), Expect = 1.198e-63
Identity = 121/179 (67.60%), Postives = 147/179 (82.12%), Query Frame = 3

Query:    3 SGEDIDSMRRQGATGDEIVQALIANSATFEKKTSFSQEKYRLKKQKKYAPKVLLRRPFTRSICETYFKKYPARIGFLRVDTLSLLLSMGNVGAHSDVLVVDMVGGILTGAVAERLG--GYVCNTYLGLTPYPVDIVRMFNFSSETCRRIVRCSLTDLCCSQT---------ELVCQSAN 506
            +GE+I++MRR+GA GDEI++ALIANS TF+KK   SQEKY+LKKQKKYAPK+LLRRPF RSICE YFKKYPARIGFLRVD LSLLL+M NV A+SDVLVVDMVGG++TGAVAERLG  GYVCNTY G +PYPV++VRMFNFS +  +RIV+ S+ +L  ++T         E VC++ N
Sbjct:  118 TGEEIEAMRREGAKGDEIIEALIANSKTFDKKFQLSQEKYKLKKQKKYAPKLLLRRPFARSICEAYFKKYPARIGFLRVDALSLLLTMANVTAYSDVLVVDMVGGLVTGAVAERLGGTGYVCNTYKGSSPYPVEMVRMFNFSDKVLKRIVQSSINELSSAKTASTEGNNQQEGVCKAEN 296

The following BLAST results are available for this feature:

BLAST of CV090842 vs. DB:swissprot:display
BLAST of CV090842 vs. Populus trichocarpa peptide v2.0
BLAST of CV090842 vs. P. persica 1.0 peptide
BLAST of CV090842 vs. TrEMBL
BLAST of CV090842 vs. Vitis vinifera peptide
BLAST of CV090842 vs. TAIR peptide

BLAST of CV090842 vs. DB:swissprot:display
Analysis Date: 2011-01-18 (BLAST: Vaccinium corymbosum unigene v1 vs Swissprot)
Total hits: 10


Match Name	E-value	Identity	Description
TRM6_DICDI	1.767e-23	39.46	tRNA (adenine-N(1)-)-methyltransferase non-catalyt...	[more]
TRM6_MOUSE	5.684e-22	41.38	tRNA (adenine-N(1)-)-methyltransferase non-catalyt...	[more]
TRM6_BOVIN	5.684e-22	40.52	tRNA (adenine-N(1)-)-methyltransferase non-catalyt...	[more]
TRM6_HUMAN	1.266e-21	40.52	tRNA (adenine-N(1)-)-methyltransferase non-catalyt...	[more]
TRM6_CRYNE	9.390e-17	43.97	tRNA (adenine-N(1)-)-methyltransferase non-catalyt...	[more]
TRM6_DEBHA	1.269e-13	34.17	tRNA (adenine-N(1)-)-methyltransferase non-catalyt...	[more]
TRM6_CANAL	3.693e-13	35.59	tRNA (adenine-N(1)-)-methyltransferase non-catalyt...	[more]
TRM6_SCHPO	9.095e-12	33.61	tRNA (adenine-N(1)-)-methyltransferase non-catalyt...	[more]
TRM6_YARLI	4.514e-11	33.91	tRNA (adenine-N(1)-)-methyltransferase non-catalyt...	[more]
TRM6_KLULA	4.225e-9	27.43	tRNA (adenine-N(1)-)-methyltransferase non-catalyt...	[more]

BLAST of CV090842 vs. Populus trichocarpa peptide v2.0
Analysis Date: 2011-01-18 (BLAST: Vaccinium corymbosum unigene v1 vs Populus trichocarpa v2.0 peptide)
Total hits: 3


Match Name	E-value	Identity
POPTR_0005s25940.1	5.893e-67	77.16	[more]
POPTR_0002s02490.2	2.562e-62	79.31	[more]
POPTR_0002s02490.1	2.562e-62	79.31	[more]

BLAST of CV090842 vs. P. persica 1.0 peptide
Analysis Date: 2011-01-18 (BLAST: Vaccinium corymbosum unigene v1 vs Ppersica v1.0 peptide)
Total hits: 1


Match Name	E-value	Identity	Description
ppa005656m	6.535e-68	78.66		[more]

BLAST of CV090842 vs. TrEMBL
Analysis Date: 2011-01-18 (BLAST: Vaccinium corymbosum unigene v1 vs TrEMBL)
Total hits: 10


Match Name	E-value	Identity	Description
B9R879\|B9R879_RICCO	2.972e-68	82.80	Translation initiation factor, putative OS=Ricinus...	[more]
B9H4W0\|B9H4W0_POPTR	6.851e-65	77.16	Predicted protein OS=Populus trichocarpa GN=POPTRD...	[more]
O80846\|O80846_ARATH	1.579e-61	67.60	Expressed protein OS=Arabidopsis thaliana GN=At2g4...	[more]
D7LD79\|D7LD79_ARALY	6.002e-61	72.22	Eukaryotic initiation factor 3 gamma subunit famil...	[more]
B9GQW0\|B9GQW0_POPTR	2.979e-60	79.31	Predicted protein OS=Populus trichocarpa GN=POPTRD...	[more]
Q7XQC2\|Q7XQC2_ORYSJ	2.788e-58	70.12	OSJNBb0021I10.2 protein OS=Oryza sativa subsp. jap...	[more]
Q01N54\|Q01N54_ORYSA	1.059e-57	69.51	OSIGBa0127D24.9 protein OS=Oryza sativa GN=OSIGBa0...	[more]
C5XH01\|C5XH01_SORBI	2.885e-55	67.07	Putative uncharacterized protein Sb03g044640 OS=So...	[more]
B9FD30\|B9FD30_ORYSJ	3.190e-54	72.97	Putative uncharacterized protein OS=Oryza sativa s...	[more]
B8AUA4\|B8AUA4_ORYSI	3.190e-54	72.97	Putative uncharacterized protein OS=Oryza sativa s...	[more]

BLAST of CV090842 vs. Vitis vinifera peptide
Analysis Date: 2011-01-25 (BLAST: Vaccinium corymbosum unigene v1 vs Vitis vinifera peptide)
Total hits: 1


Match Name	E-value	Identity	Description
GSVIVT01009891001	7.064e-71	83.44	assembled CDS	[more]

BLAST of CV090842 vs. TAIR peptide
Analysis Date: 2011-02-10 (BLAST: Vaccinium corymbosum unigene v1 vs TAIR 10 peptide)
Total hits: 1


Match Name	E-value	Identity	Description
AT2G45730.1	1.198e-63	67.60	\| Symbols: \| eukaryotic initiation factor 3 gamma...	[more]

InterPro

Analysis Name: InterProScan analysis for Vaccinium corymbosum unigene v1
Date Performed: 2011-01-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	SEG	seg	seg	coord: 44..63 score
None	No IPR available	SEG	seg	seg	coord: 70..81 score
IPR007316	Eukaryotic initiation factor 3, gamma subunit	PANTHER	PTHR12945	TRANSLATION INITIATION FACTOR EIF3-RELATED	coord: 26..148 score: 6.9
IPR007316	Eukaryotic initiation factor 3, gamma subunit	PFAM	PF04189	Gcd10p	coord: 2..148 score: 2

Properties


Property Name	Value
Singlet in analysis	Vaccinium corymbosum unigene v1

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>CV090842 ID=CV090842; Name=CV090842; organism=Vaccinium corymbosum; type=EST; length=583bp
TCTCTGGTGAAGATATTGATTCAATGCGAAGACAGGGTGCCACTGGGGAT
GAAATAGTTCAAGCTCTCATTGCGAATAGTGCAACATTCGAGAAGAAAAC
ATCATTTTCGCAAGAGAAGTATAGACTAAAGAAGCAGAAGAAGTATGCAC
CCAAGGTACTTCTGAGGCGTCCTTTTACTCGGAGTATATGTGAGACATAC
TTCAAGAAATATCCGGCTAGAATTGGGTTCTTGCGGGTGGACACTTTATC
TCTTCTTCTCTCCATGGGTAATGTTGGTGCGCATTCTGATGTCCTTGTGG
TGGATATGGTTGGTGGTATTCTTACTGGTGCTGTGGCTGAGCGTTTGGGA
GGTTATGTCTGCAATACGTATCTTGGGCTTACACCATATCCTGTGGATAT
TGTCAGAATGTTCAATTTCAGCAGTGAAACTTGCAGAAGGATCGTGCGGT
GTTCACTCACTGACCTTTGCTGTTCTCAAACGGAACTTGTGTGCCAGTCA
GCCAATCTGGGGAACCCCGCAACATTGAGAGTCAATCAAAGAAGAAAAAA
TCTTCNATGTGCTCAGTAAGCNTGGATGAAAGT

Annotated Terms

The following terms have been associated with this EST:

Vocabulary: **Molecular Function**
Term	Definition
GO:0003743	translation initiation factor activity

Vocabulary: **Biological Process**
Term	Definition
GO:0006413	translational initiation

Vocabulary: **INTERPRO**
Term	Definition
noIPR	unintegrated
IPR007316	Eukaryotic initiation factor 3, gamma subunit