CV090864 | GDV

EST Overview


Name	CV090864
Unique Name	CV090864
Type	EST
Organism	Vaccinium corymbosum (northern highbush blueberry)
Sequence length	574

Libraries


Library Name	Type
LIBEST_014530 cDNA cold acclimated Bluecrop library	cdna_library

Unigenes

This EST is part of the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
	Vaccinium corymbosum unigene v1	EST

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
Vaccinium corymbosum unigene v1	2011-01-18
BLAST: Vaccinium corymbosum unigene v1 vs Ppersica v1.0 peptide	2011-01-18
BLAST: Vaccinium corymbosum unigene v1 vs Populus trichocarpa v2.0 peptide	2011-01-18
BLAST: Vaccinium corymbosum unigene v1 vs TrEMBL	2011-01-18
BLAST: Vaccinium corymbosum unigene v1 vs Vitis vinifera peptide	2011-01-25
BLAST: Vaccinium corymbosum unigene v1 vs TAIR 10 peptide	2011-02-10
InterProScan analysis for Vaccinium corymbosum unigene v1	2011-01-18

Homology

[Close]

BLAST of CV090864 vs. Populus trichocarpa peptide v2.0
Match: POPTR_0006s09350.5 ()

HSP 1 Score: 156.377 bits (394), Expect = 1.134e-38
Identity = 90/159 (56.60%), Postives = 99/159 (62.26%), Query Frame = 1

Query:   10 DGKKQLGXXXXXXXFTSDLFGTKXXXXXXXXXXXXXXXXXXXKVLGRESLRSEAAEKKQDSSSQAWSTKPG--AQDTTIPQSSEGENVSVPNKDPSPFYQEQRGQPCHLSSSIYYGGQDIYSHPQNTQ-GSVNPTINKDSGEDDSGSASRGKLVARGLY 477
            +GKKQ G       FTSDLFG+K                   KVLGRESLR E AEKKQDS+  AW+TK G  A D T  + +EGE+ SVPNKD S  YQEQR QPCHLSSSIYYGGQDIY HPQ     S+NP   KD  EDD+GSASRG     GLY
Sbjct:    2 EGKKQTGSSSSS--FTSDLFGSKENSPSSMGIFGSIFAPASPKVLGRESLRFEVAEKKQDSADDAWNTKSGTPASDLT-SKMNEGESQSVPNKDMSSIYQEQRVQPCHLSSSIYYGGQDIYHHPQTAHTSSINPMFKKDGPEDDTGSASRGNWWQGGLY 157

[Close]

BLAST of CV090864 vs. Populus trichocarpa peptide v2.0
Match: POPTR_0006s09350.2 ()

HSP 1 Score: 156.377 bits (394), Expect = 1.134e-38
Identity = 90/159 (56.60%), Postives = 99/159 (62.26%), Query Frame = 1

Query:   10 DGKKQLGXXXXXXXFTSDLFGTKXXXXXXXXXXXXXXXXXXXKVLGRESLRSEAAEKKQDSSSQAWSTKPG--AQDTTIPQSSEGENVSVPNKDPSPFYQEQRGQPCHLSSSIYYGGQDIYSHPQNTQ-GSVNPTINKDSGEDDSGSASRGKLVARGLY 477
            +GKKQ G       FTSDLFG+K                   KVLGRESLR E AEKKQDS+  AW+TK G  A D T  + +EGE+ SVPNKD S  YQEQR QPCHLSSSIYYGGQDIY HPQ     S+NP   KD  EDD+GSASRG     GLY
Sbjct:    2 EGKKQTGSSSSS--FTSDLFGSKENSPSSMGIFGSIFAPASPKVLGRESLRFEVAEKKQDSADDAWNTKSGTPASDLT-SKMNEGESQSVPNKDMSSIYQEQRVQPCHLSSSIYYGGQDIYHHPQTAHTSSINPMFKKDGPEDDTGSASRGNWWQGGLY 157

[Close]

BLAST of CV090864 vs. Populus trichocarpa peptide v2.0
Match: POPTR_0006s09350.4 ()

HSP 1 Score: 152.91 bits (385), Expect = 1.254e-37
Identity = 87/151 (57.62%), Postives = 96/151 (63.58%), Query Frame = 1

Query:   10 DGKKQLGXXXXXXXFTSDLFGTKXXXXXXXXXXXXXXXXXXXKVLGRESLRSEAAEKKQDSSSQAWSTKPG--AQDTTIPQSSEGENVSVPNKDPSPFYQEQRGQPCHLSSSIYYGGQDIYSHPQNTQ-GSVNPTINKDSGEDDSGSASRG 453
            +GKKQ G       FTSDLFG+K                   KVLGRESLR E AEKKQDS+  AW+TK G  A D T  + +EGE+ SVPNKD S  YQEQR QPCHLSSSIYYGGQDIY HPQ     S+NP   KD  EDD+GSASRG
Sbjct:    2 EGKKQTGSSSSS--FTSDLFGSKENSPSSMGIFGSIFAPASPKVLGRESLRFEVAEKKQDSADDAWNTKSGTPASDLT-SKMNEGESQSVPNKDMSSIYQEQRVQPCHLSSSIYYGGQDIYHHPQTAHTSSINPMFKKDGPEDDTGSASRG 149

[Close]

BLAST of CV090864 vs. Populus trichocarpa peptide v2.0
Match: POPTR_0006s09350.1 ()

HSP 1 Score: 152.91 bits (385), Expect = 1.254e-37
Identity = 87/151 (57.62%), Postives = 96/151 (63.58%), Query Frame = 1

Query:   10 DGKKQLGXXXXXXXFTSDLFGTKXXXXXXXXXXXXXXXXXXXKVLGRESLRSEAAEKKQDSSSQAWSTKPG--AQDTTIPQSSEGENVSVPNKDPSPFYQEQRGQPCHLSSSIYYGGQDIYSHPQNTQ-GSVNPTINKDSGEDDSGSASRG 453
            +GKKQ G       FTSDLFG+K                   KVLGRESLR E AEKKQDS+  AW+TK G  A D T  + +EGE+ SVPNKD S  YQEQR QPCHLSSSIYYGGQDIY HPQ     S+NP   KD  EDD+GSASRG
Sbjct:    2 EGKKQTGSSSSS--FTSDLFGSKENSPSSMGIFGSIFAPASPKVLGRESLRFEVAEKKQDSADDAWNTKSGTPASDLT-SKMNEGESQSVPNKDMSSIYQEQRVQPCHLSSSIYYGGQDIYHHPQTAHTSSINPMFKKDGPEDDTGSASRG 149

[Close]

BLAST of CV090864 vs. Populus trichocarpa peptide v2.0
Match: POPTR_0006s09350.6 ()

HSP 1 Score: 133.265 bits (334), Expect = 1.028e-31
Identity = 77/139 (55.40%), Postives = 86/139 (61.87%), Query Frame = 1

Query:   10 DGKKQLGXXXXXXXFTSDLFGTKXXXXXXXXXXXXXXXXXXXKVLGRESLRSEAAEKKQDSSSQAWSTKPG--AQDTTIPQSSEGENVSVPNKDPSPFYQEQRGQPCHLSSSIYYGGQDIYSHPQNTQ-GSVNPTINKD 417
            +GKKQ G       FTSDLFG+K                   KVLGRESLR E AEKKQDS+  AW+TK G  A D T  + +EGE+ SVPNKD S  YQEQR QPCHLSSSIYYGGQDIY HPQ     S+NP +  D
Sbjct:    2 EGKKQTGSSSSS--FTSDLFGSKENSPSSMGIFGSIFAPASPKVLGRESLRFEVAEKKQDSADDAWNTKSGTPASDLT-SKMNEGESQSVPNKDMSSIYQEQRVQPCHLSSSIYYGGQDIYHHPQTAHTSSINPMVCMD 137

[Close]

BLAST of CV090864 vs. Populus trichocarpa peptide v2.0
Match: POPTR_0006s09350.3 ()

HSP 1 Score: 133.265 bits (334), Expect = 1.028e-31
Identity = 77/139 (55.40%), Postives = 86/139 (61.87%), Query Frame = 1

Query:   10 DGKKQLGXXXXXXXFTSDLFGTKXXXXXXXXXXXXXXXXXXXKVLGRESLRSEAAEKKQDSSSQAWSTKPG--AQDTTIPQSSEGENVSVPNKDPSPFYQEQRGQPCHLSSSIYYGGQDIYSHPQNTQ-GSVNPTINKD 417
            +GKKQ G       FTSDLFG+K                   KVLGRESLR E AEKKQDS+  AW+TK G  A D T  + +EGE+ SVPNKD S  YQEQR QPCHLSSSIYYGGQDIY HPQ     S+NP +  D
Sbjct:    2 EGKKQTGSSSSS--FTSDLFGSKENSPSSMGIFGSIFAPASPKVLGRESLRFEVAEKKQDSADDAWNTKSGTPASDLT-SKMNEGESQSVPNKDMSSIYQEQRVQPCHLSSSIYYGGQDIYHHPQTAHTSSINPMVCMD 137

[Close]

BLAST of CV090864 vs. Populus trichocarpa peptide v2.0
Match: POPTR_0009s04320.1 ()

HSP 1 Score: 92.4337 bits (228), Expect = 2.011e-19
Identity = 62/166 (37.35%), Postives = 80/166 (48.19%), Query Frame = 1

Query:    4 MDDGKKQLGXXXXXXXFTSDLFGTKXXXXXXXXXXXXXXXXXXXKVLGRESLRSEAAE--KKQDSSSQAWSTKPGAQDTTIPQSSEGENVSVPNKDPSPFYQEQRGQPCHLSSSIYYGGQDIYSHPQNTQ-GSVNPTINKDSGEDDSG-----SASRGKLVARGLY 477
            MD  K+          FT+DLFGT                     V+GR+S  SE     +KQ   +QAW  K G+     P +S+  + S+P+KD +   QE+R +PCHLSSS+YYGGQ+ YS   +TQ     P   KD GEDD       SASRG      LY
Sbjct:    1 MDSNKQGACFSSSSSSFTADLFGTTESAPVSSAGIFASMFPPPSTVVGRKSSGSEVTGSWQKQSYGNQAWYPKQGS-----PANSQAASYSMPDKDRNSVIQEERVEPCHLSSSLYYGGQENYSQSPSTQMAGSYPIFKKDGGEDDPNGSNPHSASRGNWWQGSLY 161

[Close]

BLAST of CV090864 vs. Populus trichocarpa peptide v2.0
Match: POPTR_0009s04320.2 ()

HSP 1 Score: 79.7221 bits (195), Expect = 1.349e-15
Identity = 48/130 (36.92%), Postives = 66/130 (50.77%), Query Frame = 1

Query:    4 MDDGKKQLGXXXXXXXFTSDLFGTKXXXXXXXXXXXXXXXXXXXKVLGRESLRSEAAE--KKQDSSSQAWSTKPGAQDTTIPQSSEGENVSVPNKDPSPFYQEQRGQPCHLSSSIYYGGQDIYSHPQNTQ 387
            MD  K+          FT+DLFGT                     V+GR+S  SE     +KQ   +QAW  K G+     P +S+  + S+P+KD +   QE+R +PCHLSSS+YYGGQ+ YS   +TQ
Sbjct:    1 MDSNKQGACFSSSSSSFTADLFGTTESAPVSSAGIFASMFPPPSTVVGRKSSGSEVTGSWQKQSYGNQAWYPKQGS-----PANSQAASYSMPDKDRNSVIQEERVEPCHLSSSLYYGGQENYSQSPSTQ 125

[Close]

BLAST of CV090864 vs. Populus trichocarpa peptide v2.0
Match: POPTR_0008s06200.1 ()

HSP 1 Score: 56.9954 bits (136), Expect = 9.365e-9
Identity = 32/83 (38.55%), Postives = 43/83 (51.81%), Query Frame = 1

Query:  244 QSSEGENVSVPNKDPSPFYQEQRGQPCHLSSSIYYGGQDIYSHPQNTQGSVNPTINKDSGED-----DSGSASRGKLVARGLY 477
            + ++GE+  +  K  S  YQ +  +PC+ SSSIYYGGQ+ YS P+           KD G+D     D  SASRG      LY
Sbjct:   68 RKAKGESSGISGKGQSSVYQNETPEPCYFSSSIYYGGQENYS-PRTKNSESQHVFKKDYGKDDPNGNDPNSASRGNWWQGSLY 149

[Close]

BLAST of CV090864 vs. Populus trichocarpa peptide v2.0
Match: POPTR_0010s20370.1 ()

HSP 1 Score: 48.9062 bits (115), Expect = 5.032e-7
Identity = 30/82 (36.59%), Postives = 41/82 (50.00%), Query Frame = 1

Query:  223 AQDTTIPQSSEGENVSVPNKDPSPFYQEQRGQPCHLSSSIYYGGQDIYSHPQNTQGSVNPTINKDSGED-----DSGSASRG 453
            A    + Q ++GE      K  S  +Q +  +PC+LSSSIYYGGQ+ YS P+           KD  ++     D  SASRG
Sbjct:   61 ANRDNVAQKAKGEG---SGKGKSVVFQNETPEPCYLSSSIYYGGQENYS-PRTKNSEYQHVFKKDDEQENPNGNDPNSASRG 138

HSP 2 Score: 21.9422 bits (45), Expect = 5.032e-7
Identity = 8/19 (42.11%), Postives = 14/19 (73.68%), Query Frame = 2

Query:  455 NWWQGVFILLRAHLLWHGS 511
            NWWQG+ + +R+  + HG+
Sbjct:  139 NWWQGI-MTMRSLNIDHGT 156

[Close]

BLAST of CV090864 vs. P. persica 1.0 peptide
Match: ppa012807m ()

HSP 1 Score: 120.939 bits (302), Expect = 3.798e-28
Identity = 75/157 (47.77%), Postives = 90/157 (57.32%), Query Frame = 1

Query:   10 DGKKQLGXXXXXXXFTSDLFGTKXXXXXXXXXXXXXXXXXXXKVLGRESLRSEAAEKKQDSSSQAWSTKPGAQDTTIPQSSEGENVSVPNKDPSPFYQEQR-GQPCHLSSSIYYGGQDIYSHPQNTQGSVNPTINKDSGEDDSGSASRGKLVARGLY 477
            +G+KQ+G       FTS+LFG+K                    VLGRESLRSE   KK   + +    KPG +       SEGE+ ++PNKD S FYQ+QR  QPCHLSSSIYYGGQDIYS+PQ+TQ     +  KD  EDDSGSA RG      LY
Sbjct:    2 EGRKQVGSSSS---FTSELFGSKESSSSSGIFGAIFAPSSKELVLGRESLRSEVTGKKL--TDEPLHVKPG-EPVGDSNGSEGESQNMPNKDMSSFYQDQRVQQPCHLSSSIYYGGQDIYSYPQSTQSPGFNSYKKDGTEDDSGSACRGNWWQGSLY 152

[Close]

BLAST of CV090864 vs. P. persica 1.0 peptide
Match: ppa012798m ()

HSP 1 Score: 120.939 bits (302), Expect = 3.798e-28
Identity = 76/158 (48.10%), Postives = 90/158 (56.96%), Query Frame = 1

Query:   10 DGKKQLGXXXXXXXFTSDLFGTKXXXXXXXXXXXXXXXXXXXKVLGRESLRSEAAEKKQDSSSQAWSTKPGAQDTTIPQSSEGENVSVPNKDPSPFYQEQR-GQPCHLSSSIYYGGQDIYSHPQNTQG-SVNPTINKDSGEDDSGSASRGKLVARGLY 477
            +G+KQ+G       FTS+LFG+K                    VLGRESLRSE   KK   + +    KPG +       SEGE+ ++PNKD S FYQ+QR  QPCHLSSSIYYGGQDIYS+PQ+TQ    N    KD  EDDSGSA RG      LY
Sbjct:    2 EGRKQVGSSSS---FTSELFGSKESSSSSGIFGAIFAPSSKELVLGRESLRSEVTGKKL--TDEPLHVKPG-EPVGDSNGSEGESQNMPNKDMSSFYQDQRVQQPCHLSSSIYYGGQDIYSYPQSTQSPGFNSVYKKDGTEDDSGSACRGNWWQGSLY 153

[Close]

BLAST of CV090864 vs. P. persica 1.0 peptide
Match: ppa012973m ()

HSP 1 Score: 102.449 bits (254), Expect = 1.398e-22
Identity = 62/127 (48.82%), Postives = 76/127 (59.84%), Query Frame = 1

Query:   10 DGKKQLGXXXXXXXFTSDLFGTKXXXXXXXXXXXXXXXXXXXKVLGRESLRSEAAEKKQDSSSQAWSTKPGAQDTTIPQSSEGENVSVPNKDPSPFYQEQR-GQPCHLSSSIYYGGQDIYSHPQNTQ 387
            +G+KQ+G       FTS+LFG+K                    VLGRESLRSE   KK   + +    KPG +       SEGE+ ++PNKD S FYQ+QR  QPCHLSSSIYYGGQDIYS+PQ+TQ
Sbjct:    2 EGRKQVGSSSS---FTSELFGSKESSSSSGIFGAIFAPSSKELVLGRESLRSEVTGKKL--TDEPLHVKPG-EPVGDSNGSEGESQNMPNKDMSSFYQDQRVQQPCHLSSSIYYGGQDIYSYPQSTQ 122

[Close]

BLAST of CV090864 vs. P. persica 1.0 peptide
Match: ppa012435m ()

HSP 1 Score: 102.449 bits (254), Expect = 1.398e-22
Identity = 62/127 (48.82%), Postives = 76/127 (59.84%), Query Frame = 1

Query:   10 DGKKQLGXXXXXXXFTSDLFGTKXXXXXXXXXXXXXXXXXXXKVLGRESLRSEAAEKKQDSSSQAWSTKPGAQDTTIPQSSEGENVSVPNKDPSPFYQEQR-GQPCHLSSSIYYGGQDIYSHPQNTQ 387
            +G+KQ+G       FTS+LFG+K                    VLGRESLRSE   KK   + +    KPG +       SEGE+ ++PNKD S FYQ+QR  QPCHLSSSIYYGGQDIYS+PQ+TQ
Sbjct:    2 EGRKQVGSSSS---FTSELFGSKESSSSSGIFGAIFAPSSKELVLGRESLRSEVTGKKL--TDEPLHVKPG-EPVGDSNGSEGESQNMPNKDMSSFYQDQRVQQPCHLSSSIYYGGQDIYSYPQSTQ 122

[Close]

BLAST of CV090864 vs. P. persica 1.0 peptide
Match: ppa011283m ()

HSP 1 Score: 100.523 bits (249), Expect = 5.312e-22
Identity = 66/167 (39.52%), Postives = 84/167 (50.30%), Query Frame = 1

Query:    1 EMDDGKKQLGXXXXXXXFTSDLFGTKXXXXXXXXXXXXXXXXXXXKVLGRESLRSEAAE--KKQDSSSQAWSTKPGAQDTTIPQSSEGENVSVPNKDPSPFYQEQRGQPCHLSSSIYYGGQDIYSHPQNTQGSVN-PTINKDSGEDD-----SGSASRGKLVARGLY 477
            +M+  KKQ          T+DLFG K                   +V+GR S  SE  E  +KQ   + AW+TK G        SSEG   S+PNKD S   QE+R +PC+LSSS+YYGGQ++YS   +T  S + P   KD GEDD     S SA+RG      LY
Sbjct:   56 KMESAKKQ---GSAASSLTADLFGVKEPPPKSSTGIFASIFPPPSQVVGRNSSSSELTEYWQKQSLGNHAWNTKQGCPAI----SSEGARYSLPNKDRSSVLQEERAEPCYLSSSLYYGGQEVYSQSPSTHASGSYPIFKKDGGEDDPNGSNSNSAARGNWWQGSLY 215

[Close]

BLAST of CV090864 vs. P. persica 1.0 peptide
Match: ppa017638m ()

HSP 1 Score: 51.6026 bits (122), Expect = 2.830e-7
Identity = 32/76 (42.11%), Postives = 43/76 (56.58%), Query Frame = 1

Query:  247 SSEGENVSVPNKDPSPFYQEQRGQPCHLSSSIYYGGQDIYS--HPQNTQGSVNPTINKDSGEDD-----SGSASRG 453
            +S+GE+    +KD S  YQ +  +PC+ SSSIYYGGQ+ YS      T+   +    KD G+DD     S  ASRG
Sbjct:   74 TSKGESTKGASKD-SMIYQNEAVEPCNFSSSIYYGGQENYSPRTGTTTESHQHHLSKKDGGDDDANGNNSNGASRG 148

[Close]

BLAST of CV090864 vs. TrEMBL
Match: B6V703|B6V703_POPEU (Putative uncharacterized protein OS=Populus euphratica PE=2 SV=1)

HSP 1 Score: 149.443 bits (376), Expect = 1.594e-34
Identity = 86/151 (56.95%), Postives = 95/151 (62.91%), Query Frame = 1

Query:   10 DGKKQLGXXXXXXXFTSDLFGTKXXXXXXXXXXXXXXXXXXXKVLGRESLRSEAAEKKQDSSSQAWSTKPG--AQDTTIPQSSEGENVSVPNKDPSPFYQEQRGQPCHLSSSIYYGGQDIYSHPQNTQ-GSVNPTINKDSGEDDSGSASRG 453
            +GKKQ G       FTSDLFG+K                   KVLGRESLR E AEKKQDS+  AW+TK G  A D T  + +E E+ SVPNKD S  YQEQR QPCHLSSSIYYGGQDIY HPQ     S+NP   KD  EDD+GSASRG
Sbjct:    2 EGKKQTGSSSSS--FTSDLFGSKENSPSSMGIFGSIFAPASPKVLGRESLRFEVAEKKQDSADDAWNTKSGIPASDLT-SKMNEDESQSVPNKDMSSIYQEQRVQPCHLSSSIYYGGQDIYHHPQTAHTSSMNPMFKKDGPEDDTGSASRG 149

[Close]

BLAST of CV090864 vs. TrEMBL
Match: B6V702|B6V702_9ROSI (Putative uncharacterized protein OS=Populus tremula x Populus alba PE=2 SV=1)

HSP 1 Score: 147.902 bits (372), Expect = 4.639e-34
Identity = 82/150 (54.67%), Postives = 92/150 (61.33%), Query Frame = 1

Query:   10 DGKKQLGXXXXXXXFTSDLFGTKXXXXXXXXXXXXXXXXXXXKVLGRESLRSEAAEKKQDSSSQAWSTKPGAQDTTIPQS-SEGENVSVPNKDPSPFYQEQRGQPCHLSSSIYYGGQDIYSHPQNTQ-GSVNPTINKDSGEDDSGSASRG 453
            +GKKQ G       FTSDLFG+K                   KVLGRESLR E  EKKQDS+  AW+TK G   + +    +EGE+ S+PNKD S  YQEQR QPCHLSSSIYYGGQDIY HPQ     S NP   KD  EDD+GSASRG
Sbjct:    2 EGKKQTGSSSSS--FTSDLFGSKEYSSSSTGIFGSIFAPASPKVLGRESLRFEVDEKKQDSADDAWNTKSGTPTSDLTSKMNEGESQSIPNKDMSSIYQEQRVQPCHLSSSIYYGGQDIYHHPQTAHTSSKNPMFKKDGPEDDTGSASRG 149

[Close]

BLAST of CV090864 vs. TrEMBL
Match: D7THF5|D7THF5_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_7.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00034066001 PE=4 SV=1)

HSP 1 Score: 146.362 bits (368), Expect = 1.350e-33
Identity = 81/159 (50.94%), Postives = 99/159 (62.26%), Query Frame = 1

Query:   10 DGKKQLGXXXXXXXFTSDLFGTKXXXXXXXXXXXXXXXXXXX--KVLGRESLRSEAAEKKQDSSSQAWSTKPGAQDTTIPQSSEGENVSVPNKDPSPFYQEQRGQPCHLSSSIYYGGQDIYSHPQNTQGSVNPT-INKDSGEDDSGSASRGKLVARGLY 477
            +GKK+ G       F +DLFG+K                     KVLGRESLR +  +KKQDS ++ W+ KPG  +  + Q SEGE+ S+ N+D   FYQEQR QPCHLSSSIYYGGQDIY HPQN+Q S  P+ + KDSGEDD+GSASRG      LY
Sbjct:    2 EGKKRAGSSSSSS-FATDLFGSKESSYPSPSSTGIFASIFSTSSKVLGRESLRPDLTKKKQDSGNEVWNAKPGTTENAL-QQSEGESQSISNRDTGSFYQEQRVQPCHLSSSIYYGGQDIYFHPQNSQSSGMPSMLKKDSGEDDTGSASRGNWWQGSLY 158

[Close]

BLAST of CV090864 vs. TrEMBL
Match: B9HC59|B9HC59_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_560836 PE=4 SV=1)

HSP 1 Score: 142.124 bits (357), Expect = 2.546e-32
Identity = 87/168 (51.79%), Postives = 96/168 (57.14%), Query Frame = 1

Query:   10 DGKKQLGXXXXXXXFTSDLFGTKXXXXXXXXXXXXXXXXXXXK-----------------VLGRESLRSEAAEKKQDSSSQAWSTKPG--AQDTTIPQSSEGENVSVPNKDPSPFYQEQRGQPCHLSSSIYYGGQDIYSHPQNTQ-GSVNPTINKDSGEDDSGSASRG 453
            +GKKQ G       FTSDLFG+K                   K                 VLGRESLR E AEKKQDS+  AW+TK G  A D T  + +EGE+ SVPNKD S  YQEQR QPCHLSSSIYYGGQDIY HPQ     S+NP   KD  EDD+GSASRG
Sbjct:    2 EGKKQTGSSSSS--FTSDLFGSKENSPSSMGIFGSIFAPASPKVLIIARRAKFIVLVLIQVLGRESLRFEVAEKKQDSADDAWNTKSGTPASDLT-SKMNEGESQSVPNKDMSSIYQEQRVQPCHLSSSIYYGGQDIYHHPQTAHTSSINPMFKKDGPEDDTGSASRG 166

[Close]

BLAST of CV090864 vs. TrEMBL
Match: B9T766|B9T766_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0358850 PE=4 SV=1)

HSP 1 Score: 123.25 bits (308), Expect = 1.224e-26
Identity = 72/156 (46.15%), Postives = 88/156 (56.41%), Query Frame = 1

Query:   10 DGKKQLGXXXXXXXFTSDLFGTKXXXXXXXXXXXXXXXXXXXKVLGRESLRSEAAEKKQDSSSQAWSTKPGAQDTTIPQSSEGENVSVPNKDPSPFYQEQRGQPCHLSSSIYYGGQDIYSHPQNTQGSVNPTINKDSGEDDSGSASRGKLVARGLY 477
            +GKKQ         FTS+LFG+K                   KVLGR SLRSE   KKQDS++   S           +S+E E  ++P++D   FYQ+Q+ QPCHLSSSIYYGGQDIY HPQN+Q S +    K+  EDDSGSASRG      LY
Sbjct:    2 EGKKQQLGSSSSSSFTSELFGSKDSSSSSSGIFGSIFAPPP-KVLGRGSLRSEMVGKKQDSANAETS-----------KSNESEGQNIPSRDTGSFYQDQKVQPCHLSSSIYYGGQDIYHHPQNSQSSSHSMFKKEGTEDDSGSASRGNWWQGSLY 145

[Close]

BLAST of CV090864 vs. TrEMBL
Match: A5C741|A5C741_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_033736 PE=4 SV=1)

HSP 1 Score: 123.25 bits (308), Expect = 1.224e-26
Identity = 66/135 (48.89%), Postives = 83/135 (61.48%), Query Frame = 1

Query:   10 DGKKQLGXXXXXXXFTSDLFGTKXXXXXXXXXXXXXXXXXXX--KVLGRESLRSEAAEKKQDSSSQAWSTKPGAQDTTIPQSSEGENVSVPNKDPSPFYQEQRGQPCHLSSSIYYGGQDIYSHPQNTQGSVNPTI 408
            +GKK+ G       F +DLFG+K                     KVLGRESLR +  +KKQDS ++ W+ KPG  +  + Q SEGE+ S+ N+D   FYQEQR QPCHLSSSIYYGGQDIY HPQN+Q S  P++
Sbjct:    2 EGKKRAGSSSSSS-FATDLFGSKESSYPSPSSTGIFASIFSTSSKVLGRESLRPDLTKKKQDSGNEVWNAKPGTTENAL-QQSEGESQSISNRDTGSFYQEQRVQPCHLSSSIYYGGQDIYFHPQNSQSSGMPSM 134

[Close]

BLAST of CV090864 vs. TrEMBL
Match: B9S3B6|B9S3B6_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0732000 PE=4 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 3.813e-20
Identity = 63/150 (42.00%), Postives = 81/150 (54.00%), Query Frame = 1

Query:   52 FTSDLFGTKXXXXXXXXXXXXXXXXXXXKVLGRESLRSEA--AEKKQDSSSQAWSTKPGAQDTTIPQSSEGENVSVPNKDPSPFYQEQRGQPCHLSSSIYYGGQDIYSHPQNTQGSVNPTINKDSGEDD------SGSASRGKLVARGLY 477
            FT+DLFGTK                   KVLGR+S  SE   + ++Q S +Q W+TK GA       SSE  + ++PNKD +    E+RG+PCHLSSS+YYGGQD YS P +++ S +  I K  G DD      S  ASRG      LY
Sbjct:   14 FTADLFGTKESPPSSSTGIFASIFPPPSKVLGRKSSGSEVIGSWQRQSSENQGWNTKRGAP----AMSSEAASYNMPNKDRNSTLMEERGEPCHLSSSLYYGGQDNYSQPPSSRNSGSYPIFKKDGVDDDPNGNNSNGASRGNWWQGSLY 159

[Close]

BLAST of CV090864 vs. TrEMBL
Match: C6T051|C6T051_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 1.602e-18
Identity = 63/146 (43.15%), Postives = 82/146 (56.16%), Query Frame = 1

Query:   10 DGKKQLGXXXXXXXFTSDLFGTKXXXXXXXXXXXXXXXXXXXKVLGRESLRSEAAEKKQDSSSQAWSTKPGAQDTTIPQSSEGENVSVPNKDPSPFYQEQRGQPCHLSSSIYYGGQDIYSHPQNTQGSVNPTI--NKDSGEDDSGS 441
            +G+K++G       FTS+L G+                    KVLGRESLRSE  EK   ++++ WS+K       I + S+GE  S  +KD S  YQEQR QPC LSSSI+YGGQDI S P++TQ S   ++   KD  EDD GS
Sbjct:    2 EGRKKMGSSS----FTSELLGSNQFQKSAASGIFESMFPPPSKVLGRESLRSEVCEK---TANERWSSKIDY----ISKGSDGETQSTTHKDMSSIYQEQRLQPCQLSSSIHYGGQDICSCPKSTQDSGYNSLLYKKDGVEDDLGS 136

[Close]

BLAST of CV090864 vs. TrEMBL
Match: D7SK66|D7SK66_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_4.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00024854001 PE=4 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 6.087e-18
Identity = 55/148 (37.16%), Postives = 80/148 (54.05%), Query Frame = 1

Query:   10 DGKKQLGXXXXXXXFTSDLFGTKXXXXXXXXXXXXXXXXXXXKVLGRESLRSEAAEKKQDSSSQAWSTKPGAQDTTIPQSSEGENVSVPNKDPSPFYQEQRGQPCHLSSSIYYGGQDIYSHPQNTQGSVNPTINKDSGEDDSGSASRG 453
            +G++Q+G       FTS+LFGTK                     +GR    SE    +  S +Q W TK G  D  + +S  G +  +PNKD +  +QE+R +PCHLSSS+YYGGQDIYS+  +TQ S +  + K   +D +G+ S+G
Sbjct:    2 EGRRQVGSSSS---FTSELFGTKESPPSNSSGIFASIFPPPSTAVGRNPANSEM---RGLSGNQTWDTKQGTPD--MGKSGVGASSIIPNKDKNQIFQEERVEPCHLSSSLYYGGQDIYSNSSSTQTSGSYPVFKKDEDDPNGNNSQG 141

[Close]

BLAST of CV090864 vs. TrEMBL
Match: B9HPB5|B9HPB5_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_650211 PE=4 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 2.313e-17
Identity = 62/166 (37.35%), Postives = 80/166 (48.19%), Query Frame = 1

Query:    4 MDDGKKQLGXXXXXXXFTSDLFGTKXXXXXXXXXXXXXXXXXXXKVLGRESLRSEAAE--KKQDSSSQAWSTKPGAQDTTIPQSSEGENVSVPNKDPSPFYQEQRGQPCHLSSSIYYGGQDIYSHPQNTQ-GSVNPTINKDSGEDDSG-----SASRGKLVARGLY 477
            MD  K+          FT+DLFGT                     V+GR+S  SE     +KQ   +QAW  K G+     P +S+  + S+P+KD +   QE+R +PCHLSSS+YYGGQ+ YS   +TQ     P   KD GEDD       SASRG      LY
Sbjct:    1 MDSNKQGACFSSSSSSFTADLFGTTESAPVSSAGIFASMFPPPSTVVGRKSSGSEVTGSWQKQSYGNQAWYPKQGS-----PANSQAASYSMPDKDRNSVIQEERVEPCHLSSSLYYGGQENYSQSPSTQMAGSYPIFKKDGGEDDPNGSNPHSASRGNWWQGSLY 161

[Close]

BLAST of CV090864 vs. Vitis vinifera peptide
Match: GSVIVT01034066001 (assembled CDS)

HSP 1 Score: 146.362 bits (368), Expect = 7.232e-36
Identity = 81/159 (50.94%), Postives = 99/159 (62.26%), Query Frame = 1

Query:   10 DGKKQLGXXXXXXXFTSDLFGTKXXXXXXXXXXXXXXXXXXX--KVLGRESLRSEAAEKKQDSSSQAWSTKPGAQDTTIPQSSEGENVSVPNKDPSPFYQEQRGQPCHLSSSIYYGGQDIYSHPQNTQGSVNPT-INKDSGEDDSGSASRGKLVARGLY 477
            +GKK+ G       F +DLFG+K                     KVLGRESLR +  +KKQDS ++ W+ KPG  +  + Q SEGE+ S+ N+D   FYQEQR QPCHLSSSIYYGGQDIY HPQN+Q S  P+ + KDSGEDD+GSASRG      LY
Sbjct:    2 EGKKRAGSSSSSS-FATDLFGSKESSYPSPSSTGIFASIFSTSSKVLGRESLRPDLTKKKQDSGNEVWNAKPGTTENAL-QQSEGESQSISNRDTGSFYQEQRVQPCHLSSSIYYGGQDIYFHPQNSQSSGMPSMLKKDSGEDDTGSASRGNWWQGSLY 158

[Close]

BLAST of CV090864 vs. Vitis vinifera peptide
Match: GSVIVT01024854001 (assembled CDS)

HSP 1 Score: 94.3597 bits (233), Expect = 3.262e-20
Identity = 55/148 (37.16%), Postives = 80/148 (54.05%), Query Frame = 1

Query:   10 DGKKQLGXXXXXXXFTSDLFGTKXXXXXXXXXXXXXXXXXXXKVLGRESLRSEAAEKKQDSSSQAWSTKPGAQDTTIPQSSEGENVSVPNKDPSPFYQEQRGQPCHLSSSIYYGGQDIYSHPQNTQGSVNPTINKDSGEDDSGSASRG 453
            +G++Q+G       FTS+LFGTK                     +GR    SE    +  S +Q W TK G  D  + +S  G +  +PNKD +  +QE+R +PCHLSSS+YYGGQDIYS+  +TQ S +  + K   +D +G+ S+G
Sbjct:    2 EGRRQVGSSSS---FTSELFGTKESPPSNSSGIFASIFPPPSTAVGRNPANSEM---RGLSGNQTWDTKQGTPD--MGKSGVGASSIIPNKDKNQIFQEERVEPCHLSSSLYYGGQDIYSNSSSTQTSGSYPVFKKDEDDPNGNNSQG 141

[Close]

BLAST of CV090864 vs. Vitis vinifera peptide
Match: GSVIVT01016436001 (assembled CDS)

HSP 1 Score: 69.3218 bits (168), Expect = 1.124e-12
Identity = 55/151 (36.42%), Postives = 71/151 (47.02%), Query Frame = 1

Query:   55 TSDLFGTKXXXXXXXXXXXXXXXXXXX--KVLGRESLRSE--AAEKKQDSSSQAWSTKPGAQDTTIPQSSEGENVSVPNKDPSPFYQEQRGQPCHLSSSIYYGGQDIYS-HPQNTQGSVNPTINKDSGEDD-----SGSASRGKLVARGLY 477
            TSDLFG K                      V GR S  +    + +KQ S +Q  + K G  D  I Q   GE+    +KD    Y  +  +PC+ SSSIYYGGQ++YS + +NT+     T+ KD GEDD     S SASRG      LY
Sbjct:   14 TSDLFGPKDSSSSSSLSSGLFGSIFQPPSSVPGRNSSHTGNIGSFRKQGSGNQVGNGKHGTPDN-ITQICSGES----SKDRGSIYHNETVEPCYFSSSIYYGGQEVYSPNARNTESHPIVTMKKDGGEDDLNGSNSNSASRGNWWQGSLY 159

[Close]

BLAST of CV090864 vs. TAIR peptide
Match: AT5G02020.1 (| Symbols: SIS | Encodes a protein involved in salt tolerance, names SIS (Salt Induced Serine rich). | chr5:386557-387921 REVERSE LENGTH=149)

HSP 1 Score: 86.6557 bits (213), Expect = 9.732e-18
Identity = 51/114 (44.74%), Postives = 63/114 (55.26%), Query Frame = 1

Query:  136 KVLGRESLRSEAAEKKQDSSSQAWSTKPGAQDTTIPQSSEGENVSVPNKDPSPFYQEQRGQPCHLSSSIYYGGQDIYSHPQNTQGSVNPTINKDSGEDDSGSASRGKLVARGLY 477
            KVLGRES+R E        +   W+ K       + ++ E +         S + Q+QR QPCHLSSSIYYGG D+Y  PQN+  + N T  KD GEDDSGSASRG      LY
Sbjct:   48 KVLGRESVRQETV------TGGCWNEKTSKTGGNVDRNREQQE-----NHGSGYQQDQRVQPCHLSSSIYYGGPDVYFQPQNS--TSNSTNKKDGGEDDSGSASRGNWWQGSLY 148

[Close]

BLAST of CV090864 vs. TAIR peptide
Match: AT5G02020.2 (| Symbols: SIS | Encodes a protein involved in salt tolerance, names SIS (Salt Induced Serine rich). | chr5:386999-387921 REVERSE LENGTH=137)

HSP 1 Score: 62.3882 bits (150), Expect = 1.965e-10
Identity = 34/83 (40.96%), Postives = 45/83 (54.22%), Query Frame = 1

Query:  136 KVLGRESLRSEAAEKKQDSSSQAWSTKPGAQDTTIPQSSEGENVSVPNKDPSPFYQEQRGQPCHLSSSIYYGGQDIYSHPQNT 384
            KVLGRES+R E        +   W+ K       + ++ E +         S + Q+QR QPCHLSSSIYYGG D+Y  PQN+
Sbjct:   48 KVLGRESVRQETV------TGGCWNEKTSKTGGNVDRNREQQE-----NHGSGYQQDQRVQPCHLSSSIYYGGPDVYFQPQNS 119

[Close]

BLAST of CV090864 vs. TAIR peptide
Match: AT3G55646.1 (| Symbols: | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G39855.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). | chr3:20645087-20646148 FORWARD LENGTH=146)

HSP 1 Score: 58.9214 bits (141), Expect = 2.173e-9
Identity = 32/78 (41.03%), Postives = 41/78 (52.56%), Query Frame = 1

Query:  244 QSSEGENVSVPNKDPSPFYQEQRGQPCHLSSSIYYGGQDIYSHPQNTQGSVNPTINKDSGEDDSGSASRGKLVARGLY 477
            QS   +      K+   +Y E+   PCHLSSS+YYGGQ+ YS   +T  + + T  KD  E DS  ASRG      LY
Sbjct:   71 QSPNAKGERSNKKEKKSYYNEETEPPCHLSSSLYYGGQETYS---STTTTTHDTYKKDGEEGDSKRASRGNWWEGSLY 145

[Close]

BLAST of CV090864 vs. TAIR peptide
Match: AT5G59080.1 (| Symbols: | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to oxidative stress; LOCATED IN: chloroplast; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 9 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G46880.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). | chr5:23847691-23848403 REVERSE LENGTH=135)

HSP 1 Score: 54.6842 bits (130), Expect = 4.098e-8
Identity = 39/105 (37.14%), Postives = 52/105 (49.52%), Query Frame = 1

Query:  190 SSSQAWSTK-PGAQDTTIPQSSEGENVSVPNKDPSPFYQEQRGQPCHLSSSIYYGGQDIYSHPQNTQGSVNPTINKD---SGEDDSG-----SASRGKLVARGLY 477
            SSS  +ST  P     +    S  ++ S   +  S   QE R +PCHLSSS+YYGGQD+Y+  ++T     P +  D   SGEDD+        SRG      LY
Sbjct:   32 SSSGIFSTMFPHPSKGSARDGSNSKHGSQAQRRESLNAQEDRVEPCHLSSSLYYGGQDVYA--RSTTNQTYPPVKNDRRRSGEDDANGQNPQDVSRGNWWQGSLY 134

[Close]

BLAST of CV090864 vs. TAIR peptide
Match: AT2G39855.2 (| Symbols: | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G55646.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). | chr2:16637845-16638852 FORWARD LENGTH=142)

HSP 1 Score: 53.5286 bits (127), Expect = 9.130e-8
Identity = 30/60 (50.00%), Postives = 36/60 (60.00%), Query Frame = 1

Query:  277 NKDPSPFYQEQRGQPCHLSSSIYYGGQDIYSHPQNTQGSVNPTINKDSGED-DSGSASRG 453
            NK+   +  E+   PC+LSSSIYYGGQD YS       + NP   K  GE+ DS SASRG
Sbjct:   79 NKERKSYQSEETQPPCNLSSSIYYGGQDNYS-----SSTTNPDAYKKDGEEGDSESASRG 133

The following BLAST results are available for this feature:

BLAST of CV090864 vs. Populus trichocarpa peptide v2.0
BLAST of CV090864 vs. P. persica 1.0 peptide
BLAST of CV090864 vs. TrEMBL
BLAST of CV090864 vs. Vitis vinifera peptide
BLAST of CV090864 vs. TAIR peptide

BLAST of CV090864 vs. Populus trichocarpa peptide v2.0
Analysis Date: 2011-01-18 (BLAST: Vaccinium corymbosum unigene v1 vs Populus trichocarpa v2.0 peptide)
Total hits: 10


Match Name	E-value	Identity
POPTR_0006s09350.5	1.134e-38	56.60	[more]
POPTR_0006s09350.2	1.134e-38	56.60	[more]
POPTR_0006s09350.4	1.254e-37	57.62	[more]
POPTR_0006s09350.1	1.254e-37	57.62	[more]
POPTR_0006s09350.6	1.028e-31	55.40	[more]
POPTR_0006s09350.3	1.028e-31	55.40	[more]
POPTR_0009s04320.1	2.011e-19	37.35	[more]
POPTR_0009s04320.2	1.349e-15	36.92	[more]
POPTR_0008s06200.1	9.365e-9	38.55	[more]
POPTR_0010s20370.1	5.032e-7	36.59	[more]

BLAST of CV090864 vs. P. persica 1.0 peptide
Analysis Date: 2011-01-18 (BLAST: Vaccinium corymbosum unigene v1 vs Ppersica v1.0 peptide)
Total hits: 6


Match Name	E-value	Identity
ppa012807m	3.798e-28	47.77	[more]
ppa012798m	3.798e-28	48.10	[more]
ppa012973m	1.398e-22	48.82	[more]
ppa012435m	1.398e-22	48.82	[more]
ppa011283m	5.312e-22	39.52	[more]
ppa017638m	2.830e-7	42.11	[more]

BLAST of CV090864 vs. TrEMBL
Analysis Date: 2011-01-18 (BLAST: Vaccinium corymbosum unigene v1 vs TrEMBL)
Total hits: 10


Match Name	E-value	Identity	Description
B6V703\|B6V703_POPEU	1.594e-34	56.95	Putative uncharacterized protein OS=Populus euphra...	[more]
B6V702\|B6V702_9ROSI	4.639e-34	54.67	Putative uncharacterized protein OS=Populus tremul...	[more]
D7THF5\|D7THF5_VITVI	1.350e-33	50.94	Whole genome shotgun sequence of line PN40024, sca...	[more]
B9HC59\|B9HC59_POPTR	2.546e-32	51.79	Predicted protein OS=Populus trichocarpa GN=POPTRD...	[more]
B9T766\|B9T766_RICCO	1.224e-26	46.15	Putative uncharacterized protein OS=Ricinus commun...	[more]
A5C741\|A5C741_VITVI	1.224e-26	48.89	Putative uncharacterized protein OS=Vitis vinifera...	[more]
B9S3B6\|B9S3B6_RICCO	3.813e-20	42.00	Putative uncharacterized protein OS=Ricinus commun...	[more]
C6T051\|C6T051_SOYBN	1.602e-18	43.15	Putative uncharacterized protein OS=Glycine max PE...	[more]
D7SK66\|D7SK66_VITVI	6.087e-18	37.16	Whole genome shotgun sequence of line PN40024, sca...	[more]
B9HPB5\|B9HPB5_POPTR	2.313e-17	37.35	Predicted protein OS=Populus trichocarpa GN=POPTRD...	[more]

BLAST of CV090864 vs. Vitis vinifera peptide
Analysis Date: 2011-01-25 (BLAST: Vaccinium corymbosum unigene v1 vs Vitis vinifera peptide)
Total hits: 3


Match Name	E-value	Identity	Description
GSVIVT01034066001	7.232e-36	50.94	assembled CDS	[more]
GSVIVT01024854001	3.262e-20	37.16	assembled CDS	[more]
GSVIVT01016436001	1.124e-12	36.42	assembled CDS	[more]

BLAST of CV090864 vs. TAIR peptide
Analysis Date: 2011-02-10 (BLAST: Vaccinium corymbosum unigene v1 vs TAIR 10 peptide)
Total hits: 5


Match Name	E-value	Identity	Description
AT5G02020.1	9.732e-18	44.74	\| Symbols: SIS \| Encodes a protein involved in sal...	[more]
AT5G02020.2	1.965e-10	40.96	\| Symbols: SIS \| Encodes a protein involved in sal...	[more]
AT3G55646.1	2.173e-9	41.03	\| Symbols: \| unknown protein; FUNCTIONS IN: molec...	[more]
AT5G59080.1	4.098e-8	37.14	\| Symbols: \| unknown protein; FUNCTIONS IN: molec...	[more]
AT2G39855.2	9.130e-8	50.00	\| Symbols: \| unknown protein; FUNCTIONS IN: molec...	[more]

InterPro

Analysis Name: InterProScan analysis for Vaccinium corymbosum unigene v1
Date Performed: 2011-01-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	SEG	seg	seg	coord: 11..17 score: NAcoord: 27..45 score
None	No IPR available	SEG	seg	seg	coord: 11..23 score
None	No IPR available	SEG	seg	seg	coord: 47..56 score

Properties


Property Name	Value
Singlet in analysis	Vaccinium corymbosum unigene v1

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>CV090864 ID=CV090864; Name=CV090864; organism=Vaccinium corymbosum; type=EST; length=574bp
GAGATGGACGACGGAAAGAAGCAATTGGGTTCTTCTTCTTCATCTTCTTC
TTTCACTTCTGATCTTTTTGGTACCAAGGATTCATCTGATTCTTCATCTT
CTGGAATTTTCGGGTCTATCTTTTCCCCTTCGTCCAAGGTATTGGGGAGG
GAGTCTCTGCGTTCTGAGGCAGCTGAGAAGAAGCAAGACTCTTCAAGTCA
GGCTTGGAGCACTAAACCTGGAGCTCAAGATACAACAATCCCTCAGAGCA
GTGAAGGCGAGAATGTGAGCGTACCAAACAAGGATCCGAGTCCTTTTTAT
CAGGAGCAAAGAGGACAACCTTGTCATCTCAGCTCATCGATATATTATGG
TGGTCAAGATATCTACTCTCATCCTCAGAATACCCAAGGCTCTGTGAATC
CAACGATCAATAAAGATAGTGGTGAAGATGATTCAGGCAGTGCTTCGAGG
GGNAAATTGGTGGCAAGGGGTCTTTATATTACTAAGAGCTCACCTCTTAT
GGCATGGGAGTTTCCTCTATAACCATTTAGGAAGTCATATATAACTATAT
AGGACAGCGGTTNCCCCTGCCTTT

Annotated Terms

The following terms have been associated with this EST:

Vocabulary: **INTERPRO**
Term	Definition
noIPR	unintegrated