CV091265
EST Overview
Libraries
Unigenes
This EST is part of the following unigenes:
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CV091265 vs. DB:swissprot:display
Match: ARR2_ARATH (Two-component response regulator ARR2 OS=Arabidopsis thaliana GN=ARR2 PE=1 SV=1) HSP 1 Score: 56.9954 bits (136), Expect = 1.376e-7 Identity = 33/72 (45.83%), Postives = 47/72 (65.28%), Query Frame = 3 Query: 201 KFRLYLKSLSGVTQRGGIPNSYFGPLEQNRNHG---SLGRFDIQALAASGQIPPQTLPALHAEFLGRPSDSK 407 K+R+YL+ L GV+Q G N F Q+++ G SL FD+Q+LA +GQ+PPQ+L L A LGRP+ +K Sbjct: 266 KYRIYLRRLGGVSQHQGNMNHSF-MTGQDQSFGPLSSLNGFDLQSLAVTGQLPPQSLAQLQAAGLGRPTLAK 336
BLAST of CV091265 vs. DB:swissprot:display
Match: ARR1_ARATH (Two-component response regulator ARR1 OS=Arabidopsis thaliana GN=ARR1 PE=1 SV=2) HSP 1 Score: 55.4546 bits (132), Expect = 4.004e-7 Identity = 33/74 (44.59%), Postives = 46/74 (62.16%), Query Frame = 3 Query: 201 KFRLYLKSLSGVTQ-RGGIPNSY-------FGPLEQNRNHGSLGRFDIQALAASGQIPPQTLPALHAEFLGRPS 398 K+R+YL+ L GV+Q +G + NS+ FGPL +L FD+QALA +GQ+P Q+L L A LGRP+ Sbjct: 287 KYRIYLRRLGGVSQHQGNLNNSFMTGQDASFGPLS------TLNGFDLQALAVTGQLPAQSLAQLQAAGLGRPA 354
BLAST of CV091265 vs. Populus trichocarpa peptide v2.0
Match: POPTR_0010s11600.1 () HSP 1 Score: 96.6709 bits (239), Expect = 1.777e-20 Identity = 48/68 (70.59%), Postives = 53/68 (77.94%), Query Frame = 3 Query: 201 KFRLYLKSLSGVTQRGGIPNSYFGPLEQNRNHGSLGRFDIQALAASGQIPPQTLPALHAEFLGRPSDS 404 KFRLYLK LSGV Q+GGI N++ GPL+ N LGRFDIQALAAS QIPPQTL ALHAE GRP+ S Sbjct: 274 KFRLYLKRLSGVAQQGGISNTFCGPLDSNVKVNPLGRFDIQALAASSQIPPQTLAALHAELFGRPTGS 341
BLAST of CV091265 vs. Populus trichocarpa peptide v2.0
Match: POPTR_0008s13490.1 () HSP 1 Score: 90.8929 bits (224), Expect = 9.750e-19 Identity = 46/68 (67.65%), Postives = 50/68 (73.53%), Query Frame = 3 Query: 201 KFRLYLKSLSGVTQRGGIPNSYFGPLEQNRNHGSLGRFDIQALAASGQIPPQTLPALHAEFLGRPSDS 404 KFRLYLK LSGV Q+GGI N + G L+ N LGRFDIQ LAASGQIPPQTL ALHAE G P+ S Sbjct: 273 KFRLYLKRLSGVAQQGGISNPFCGLLDSNVKLNPLGRFDIQVLAASGQIPPQTLAALHAELFGHPAGS 340
BLAST of CV091265 vs. Populus trichocarpa peptide v2.0
Match: POPTR_0010s00320.1 () HSP 1 Score: 56.225 bits (134), Expect = 2.661e-8 Identity = 33/66 (50.00%), Postives = 42/66 (63.64%), Query Frame = 3 Query: 201 KFRLYLKSLSGVTQ-RGGIPNSYFGPLEQNRNH-GSLGRFDIQALAASGQIPPQTLPALHAEFLGR 392 K+RLYL+ LSGV+Q + G+ NS+ P E SL D+Q LAA+GQIP Q+L L A LGR Sbjct: 258 KYRLYLRRLSGVSQHQSGMGNSFINPQEATYGPLSSLNGLDLQTLAAAGQIPAQSLATLQAAGLGR 323
BLAST of CV091265 vs. Populus trichocarpa peptide v2.0
Match: POPTR_0008s22990.1 () HSP 1 Score: 51.9878 bits (123), Expect = 5.019e-7 Identity = 30/66 (45.45%), Postives = 41/66 (62.12%), Query Frame = 3 Query: 201 KFRLYLKSLSGVTQ-RGGIPNSYFGPLEQNRNH-GSLGRFDIQALAASGQIPPQTLPALHAEFLGR 392 K+RLYL+ LSGV+Q + G+ +S+ P E SL D+Q LA +GQ+P Q+L L A LGR Sbjct: 265 KYRLYLRRLSGVSQHQNGMGSSFISPQEATYGPLSSLNGLDLQTLATAGQLPAQSLATLQAAGLGR 330
BLAST of CV091265 vs. P. persica 1.0 peptide
Match: ppa002493m () HSP 1 Score: 84.7297 bits (208), Expect = 4.922e-17 Identity = 44/66 (66.67%), Postives = 50/66 (75.76%), Query Frame = 3 Query: 201 KFRLYLKSLSGVTQRGGIPNSYFGPLEQNRNHGSLGRFDIQALAASGQIPPQTLPALHAEFLGRPS 398 KFRLYLK L+ Q+ GI N + GP+E N GSLGRFDIQALAASGQIPPQTL L AE LG+P+ Sbjct: 282 KFRLYLKRLA--QQQSGISNGFCGPVESNGKLGSLGRFDIQALAASGQIPPQTLAVLQAELLGQPA 345
BLAST of CV091265 vs. TrEMBL
Match: D7T8K3|D7T8K3_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_11.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00011650001 PE=4 SV=1) HSP 1 Score: 100.138 bits (248), Expect = 2.179e-19 Identity = 52/69 (75.36%), Postives = 57/69 (82.61%), Query Frame = 3 Query: 201 KFRLYLKSLSGVTQR-GGIPNSYFGPLEQNRNHGSLGRFDIQALAASGQIPPQTLPALHAEFLGRPSDS 404 KFRLYLK LSGV Q+ GGIPNS+ GP+E N GSLGRFDIQALAASGQIPPQTL AL AE LGRP+ + Sbjct: 269 KFRLYLKRLSGVAQQQGGIPNSFCGPVEPNVKLGSLGRFDIQALAASGQIPPQTLAALQAELLGRPTSN 337
BLAST of CV091265 vs. TrEMBL
Match: B9T4M7|B9T4M7_RICCO (Two-component sensor histidine kinase bacteria, putative OS=Ricinus communis GN=RCOM_0053570 PE=4 SV=1) HSP 1 Score: 98.2117 bits (243), Expect = 8.279e-19 Identity = 48/68 (70.59%), Postives = 55/68 (80.88%), Query Frame = 3 Query: 201 KFRLYLKSLSGVTQRGGIPNSYFGPLEQNRNHGSLGRFDIQALAASGQIPPQTLPALHAEFLGRPSDS 404 KFRLYLK LSGV Q+GGI +++ GP++ N SLGRFDIQALAASGQIPPQTL ALHAE GRP+ S Sbjct: 279 KFRLYLKRLSGVAQQGGISSTFCGPMDSNVKLNSLGRFDIQALAASGQIPPQTLAALHAELFGRPTGS 346
BLAST of CV091265 vs. TrEMBL
Match: D7GN46|D7GN46_POPCA (Putative B-type response regulator 16 OS=Populus canadensis GN=rr16 PE=2 SV=1) HSP 1 Score: 96.6709 bits (239), Expect = 2.409e-18 Identity = 48/68 (70.59%), Postives = 53/68 (77.94%), Query Frame = 3 Query: 201 KFRLYLKSLSGVTQRGGIPNSYFGPLEQNRNHGSLGRFDIQALAASGQIPPQTLPALHAEFLGRPSDS 404 KFRLYLK LSGV Q+GGI N++ GPL+ N LGRFDIQALAAS QIPPQTL ALHAE GRP+ S Sbjct: 274 KFRLYLKRLSGVAQQGGISNTFCGPLDSNVKVNPLGRFDIQALAASSQIPPQTLAALHAELFGRPTGS 341
BLAST of CV091265 vs. TrEMBL
Match: B9HVU5|B9HVU5_POPTR (Type-b response regulator OS=Populus trichocarpa GN=PtRR16 PE=4 SV=1) HSP 1 Score: 96.6709 bits (239), Expect = 2.409e-18 Identity = 48/68 (70.59%), Postives = 53/68 (77.94%), Query Frame = 3 Query: 201 KFRLYLKSLSGVTQRGGIPNSYFGPLEQNRNHGSLGRFDIQALAASGQIPPQTLPALHAEFLGRPSDS 404 KFRLYLK LSGV Q+GGI N++ GPL+ N LGRFDIQALAAS QIPPQTL ALHAE GRP+ S Sbjct: 274 KFRLYLKRLSGVAQQGGISNTFCGPLDSNVKVNPLGRFDIQALAASSQIPPQTLAALHAELFGRPTGS 341
BLAST of CV091265 vs. TrEMBL
Match: D7GN45|D7GN45_POPCA (Putative B-type response regulator 15 OS=Populus canadensis GN=rr15 PE=2 SV=1) HSP 1 Score: 87.0409 bits (214), Expect = 1.909e-15 Identity = 44/66 (66.67%), Postives = 48/66 (72.73%), Query Frame = 3 Query: 201 KFRLYLKSLSGVTQRGGIPNSYFGPLEQNRNHGSLGRFDIQALAASGQIPPQTLPALHAEFLGRPS 398 KFRLYLK LSGV Q+GGI N + G L+ N LGRFDIQ LAASGQIPPQTL A HAE G P+ Sbjct: 273 KFRLYLKRLSGVAQQGGISNPFCGLLDSNVKLNPLGRFDIQVLAASGQIPPQTLAAPHAELFGHPA 338
BLAST of CV091265 vs. TrEMBL
Match: B9HJH2|B9HJH2_POPTR (Type-b response regulator (Fragment) OS=Populus trichocarpa GN=POPTRDRAFT_419669 PE=4 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 1.237e-14 Identity = 43/60 (71.67%), Postives = 46/60 (76.67%), Query Frame = 3 Query: 201 KFRLYLKSLSGVTQRGGIPNSYFGPLEQNRNHGSLGRFDIQALAASGQIPPQTLPALHAE 380 KFRLYLK LSGV Q+GGI N + G L+ N LGRFDIQ LAASGQIPPQTL ALHAE Sbjct: 244 KFRLYLKRLSGVAQQGGISNPFCGLLDSNVKLNPLGRFDIQVLAASGQIPPQTLAALHAE 303
BLAST of CV091265 vs. TrEMBL
Match: Q8H7S7|Q8H7S7_ORYSJ (B-type response regulator OS=Oryza sativa subsp. japonica GN=OSJNBa0081P02.4 PE=2 SV=1) HSP 1 Score: 64.3142 bits (155), Expect = 1.325e-8 Identity = 37/68 (54.41%), Postives = 43/68 (63.24%), Query Frame = 3 Query: 201 KFRLYLKSLSGVTQRGGIPNSYFGPLEQNRNHGSLGRFDIQALAASGQIPPQTLPALHAEFLGRPSDS 404 KFRLYLK ++ GI N + P + GSLG D QALAASGQIPPQ L AL E LGRP++S Sbjct: 252 KFRLYLKRIA--QHHAGIANPFCPPASSGKV-GSLGGLDFQALAASGQIPPQALAALQDELLGRPTNS 316
BLAST of CV091265 vs. TrEMBL
Match: A2XE31|A2XE31_ORYSI (Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_10579 PE=4 SV=1) HSP 1 Score: 64.3142 bits (155), Expect = 1.325e-8 Identity = 37/68 (54.41%), Postives = 43/68 (63.24%), Query Frame = 3 Query: 201 KFRLYLKSLSGVTQRGGIPNSYFGPLEQNRNHGSLGRFDIQALAASGQIPPQTLPALHAEFLGRPSDS 404 KFRLYLK ++ GI N + P + GSLG D QALAASGQIPPQ L AL E LGRP++S Sbjct: 252 KFRLYLKRIA--QHHAGIANPFCPPASSGKV-GSLGGLDFQALAASGQIPPQALAALQDELLGRPTNS 316
BLAST of CV091265 vs. TrEMBL
Match: Q948L2|Q948L2_MAIZE (Response regulator 10 OS=Zea mays GN=ZmRR10 PE=2 SV=1) HSP 1 Score: 62.7734 bits (151), Expect = 3.854e-8 Identity = 35/68 (51.47%), Postives = 43/68 (63.24%), Query Frame = 3 Query: 201 KFRLYLKSLSGVTQRGGIPNSYFGPLEQNRNHGSLGRFDIQALAASGQIPPQTLPALHAEFLGRPSDS 404 KFRLYLK ++ GIP+ + P+ + N LG + QALAASGQIPPQ L AL E LGRP+ S Sbjct: 251 KFRLYLKRIA--QHHAGIPHPFVAPVS-SANVAPLGGLEFQALAASGQIPPQALAALQDELLGRPTSS 315
BLAST of CV091265 vs. TrEMBL
Match: C0HE02|C0HE02_MAIZE (Putative uncharacterized protein OS=Zea mays PE=2 SV=1) HSP 1 Score: 62.7734 bits (151), Expect = 3.854e-8 Identity = 35/68 (51.47%), Postives = 43/68 (63.24%), Query Frame = 3 Query: 201 KFRLYLKSLSGVTQRGGIPNSYFGPLEQNRNHGSLGRFDIQALAASGQIPPQTLPALHAEFLGRPSDS 404 KFRLYLK ++ GIP+ + P+ + N LG + QALAASGQIPPQ L AL E LGRP+ S Sbjct: 251 KFRLYLKRIA--QHHAGIPHPFVAPVS-SANVAPLGGLEFQALAASGQIPPQALAALQDELLGRPTSS 315
BLAST of CV091265 vs. Vitis vinifera peptide
Match: GSVIVT01011650001 (assembled CDS) HSP 1 Score: 100.138 bits (248), Expect = 9.650e-22 Identity = 52/69 (75.36%), Postives = 57/69 (82.61%), Query Frame = 3 Query: 201 KFRLYLKSLSGVTQR-GGIPNSYFGPLEQNRNHGSLGRFDIQALAASGQIPPQTLPALHAEFLGRPSDS 404 KFRLYLK LSGV Q+ GGIPNS+ GP+E N GSLGRFDIQALAASGQIPPQTL AL AE LGRP+ + Sbjct: 269 KFRLYLKRLSGVAQQQGGIPNSFCGPVEPNVKLGSLGRFDIQALAASGQIPPQTLAALQAELLGRPTSN 337
BLAST of CV091265 vs. Vitis vinifera peptide
Match: GSVIVT01035051001 (assembled CDS) HSP 1 Score: 56.6102 bits (135), Expect = 1.224e-8 Identity = 32/66 (48.48%), Postives = 42/66 (63.64%), Query Frame = 3 Query: 201 KFRLYLKSLSGVTQ-RGGIPNSYFGPLEQNRNH-GSLGRFDIQALAASGQIPPQTLPALHAEFLGR 392 K+RLYL+ LSGV+Q + G+ NS+ GP E SL D+Q LA +GQ+P Q+L L A LGR Sbjct: 263 KYRLYLRRLSGVSQHQNGLNNSFMGPQEATFGSISSLNGLDLQTLAVAGQLPAQSLATLQAAGLGR 328
BLAST of CV091265 vs. TAIR peptide
Match: AT4G16110.1 (| Symbols: ARR2, RR2 | response regulator 2 | chr4:9112979-9115785 FORWARD LENGTH=664) HSP 1 Score: 56.9954 bits (136), Expect = 1.372e-8 Identity = 33/72 (45.83%), Postives = 47/72 (65.28%), Query Frame = 3 Query: 201 KFRLYLKSLSGVTQRGGIPNSYFGPLEQNRNHG---SLGRFDIQALAASGQIPPQTLPALHAEFLGRPSDSK 407 K+R+YL+ L GV+Q G N F Q+++ G SL FD+Q+LA +GQ+PPQ+L L A LGRP+ +K Sbjct: 266 KYRIYLRRLGGVSQHQGNMNHSF-MTGQDQSFGPLSSLNGFDLQSLAVTGQLPPQSLAQLQAAGLGRPTLAK 336
BLAST of CV091265 vs. TAIR peptide
Match: AT3G16857.2 (| Symbols: ARR1, RR1 | response regulator 1 | chr3:5756113-5759139 FORWARD LENGTH=690) HSP 1 Score: 55.4546 bits (132), Expect = 3.991e-8 Identity = 33/74 (44.59%), Postives = 46/74 (62.16%), Query Frame = 3 Query: 201 KFRLYLKSLSGVTQ-RGGIPNSY-------FGPLEQNRNHGSLGRFDIQALAASGQIPPQTLPALHAEFLGRPS 398 K+R+YL+ L GV+Q +G + NS+ FGPL +L FD+QALA +GQ+P Q+L L A LGRP+ Sbjct: 287 KYRIYLRRLGGVSQHQGNLNNSFMTGQDASFGPLS------TLNGFDLQALAVTGQLPAQSLAQLQAAGLGRPA 354
BLAST of CV091265 vs. TAIR peptide
Match: AT3G16857.1 (| Symbols: ARR1, RR1 | response regulator 1 | chr3:5756113-5758853 FORWARD LENGTH=669) HSP 1 Score: 55.4546 bits (132), Expect = 3.991e-8 Identity = 33/74 (44.59%), Postives = 46/74 (62.16%), Query Frame = 3 Query: 201 KFRLYLKSLSGVTQ-RGGIPNSY-------FGPLEQNRNHGSLGRFDIQALAASGQIPPQTLPALHAEFLGRPS 398 K+R+YL+ L GV+Q +G + NS+ FGPL +L FD+QALA +GQ+P Q+L L A LGRP+ Sbjct: 287 KYRIYLRRLGGVSQHQGNLNNSFMTGQDASFGPLS------TLNGFDLQALAVTGQLPAQSLAQLQAAGLGRPA 354 The following BLAST results are available for this feature:
BLAST of CV091265 vs. DB:swissprot:display
Analysis Date: 2011-01-18 (BLAST: Vaccinium corymbosum unigene v1 vs Swissprot) Total hits: 2
BLAST of CV091265 vs. Populus trichocarpa peptide v2.0
Analysis Date: 2011-01-18 (BLAST: Vaccinium corymbosum unigene v1 vs Populus trichocarpa v2.0 peptide) Total hits: 4
BLAST of CV091265 vs. P. persica 1.0 peptide
Analysis Date: 2011-01-18 (BLAST: Vaccinium corymbosum unigene v1 vs Ppersica v1.0 peptide) Total hits: 1
BLAST of CV091265 vs. TrEMBL
Analysis Date: 2011-01-18 (BLAST: Vaccinium corymbosum unigene v1 vs TrEMBL) Total hits: 10
BLAST of CV091265 vs. Vitis vinifera peptide
Analysis Date: 2011-01-25 (BLAST: Vaccinium corymbosum unigene v1 vs Vitis vinifera peptide) Total hits: 2
BLAST of CV091265 vs. TAIR peptide
Analysis Date: 2011-02-10 (BLAST: Vaccinium corymbosum unigene v1 vs TAIR 10 peptide) Total hits: 3
InterPro
Analysis Name: InterProScan analysis for Vaccinium corymbosum unigene v1
Date Performed: 2011-01-18
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CV091265 ID=CV091265; Name=CV091265; organism=Vaccinium corymbosum; type=EST; length=781bpback to top Annotated Terms
The
following terms have been associated with
this EST:
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