CV091359
EST Overview
Libraries
Unigenes
This EST is part of the following unigenes:
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CV091359 vs. TrEMBL
Match: D7TSR3|D7TSR3_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_6.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00030843001 PE=4 SV=1) HSP 1 Score: 125.176 bits (313), Expect = 6.020e-27 Identity = 66/143 (46.15%), Postives = 92/143 (64.34%), Query Frame = 2 Query: 5 TYTGEVGKSKRDAEQLAARAAILSIMGNPDSGTIIYEIIKCKFKFFAALSEVTNSNNTQDSFVPAAVTTGANLGCPLSKGKELEIPGCTNTMLNTAIPKTCSGQLSNIPATYQTFHEFKKPQLVPSAEAITPPIVFVPPVLKQ 433 TYTG+ G++K++AEQLAAR ILSI+GN SGT++ EIIK K K +AAL V + + +P +T+ G P KGKE+E+ T+ +L TA+ SGQL ++P T+ HE +KP+ S+E I PPI FVP V +Q Sbjct: 148 TYTGDAGRNKKEAEQLAARTVILSILGNSGSGTLLSEIIKSKVKLYAALHRVKDPSYIHTGILPIGLTS----GIPPCKGKEVEVAPGTDQLLPTAVSVPLSGQLVHVPVTHPPVHELEKPKPNVSSEVIAPPISFVPSVFEQ 286
BLAST of CV091359 vs. TrEMBL
Match: B9GV44|B9GV44_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_552983 PE=4 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 1.102e-12 Identity = 37/70 (52.86%), Postives = 52/70 (74.29%), Query Frame = 2 Query: 5 TYTGEVGKSKRDAEQLAARAAILSIMGNPDSGTIIYEIIKCKFKFFAALSEVTNSNNTQDSFVPAAVTTG 214 +YTG+ G++K++AEQLAARA ILS++GN S I+YEIIK K K +AAL V + +++Q + VP AV G Sbjct: 265 SYTGDAGRNKKEAEQLAARAVILSLIGNSGSSKILYEIIKSKSKLYAALDRVKDPSHSQPNIVPVAVKVG 334
BLAST of CV091359 vs. TrEMBL
Match: B9T2K0|B9T2K0_RICCO (Double-stranded RNA binding protein, putative OS=Ricinus communis GN=RCOM_0285330 PE=4 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 6.687e-10 Identity = 48/144 (33.33%), Postives = 74/144 (51.39%), Query Frame = 2 Query: 5 TYTGEVGKSKRDAEQLAARAAILSIMGNPDSGTIIYEIIKCKFKFFAALSEVTNSNNTQDSFVPAAVTTGANLGCPLSKGKELEIPGCTNTMLNTAIPKTCSGQLSNIPATYQTFHEFKKPQLVPSAEAITPPIVFVPPVLKQS 436 TY G++G++K++AEQLAARAA+LS++ N +SG II + K K K + + ++S + Q+S +P GK+++ + + IP+ S A + HEF K + E I PI FV PV QS Sbjct: 141 TYNGDIGRTKKEAEQLAARAAVLSLLRNVESGEIISKFFKSKRKLYVGFHK-SDSQDAQNSNMPVV-------------GKDIKTEALMVSNV-VPIPEAAS-------ALHPPHHEFTKTKPEKICEGIDLPIAFVHPVSGQS 262
BLAST of CV091359 vs. Vitis vinifera peptide
Match: GSVIVT01030843001 (assembled CDS) HSP 1 Score: 125.176 bits (313), Expect = 2.725e-29 Identity = 66/143 (46.15%), Postives = 92/143 (64.34%), Query Frame = 2 Query: 5 TYTGEVGKSKRDAEQLAARAAILSIMGNPDSGTIIYEIIKCKFKFFAALSEVTNSNNTQDSFVPAAVTTGANLGCPLSKGKELEIPGCTNTMLNTAIPKTCSGQLSNIPATYQTFHEFKKPQLVPSAEAITPPIVFVPPVLKQ 433 TYTG+ G++K++AEQLAAR ILSI+GN SGT++ EIIK K K +AAL V + + +P +T+ G P KGKE+E+ T+ +L TA+ SGQL ++P T+ HE +KP+ S+E I PPI FVP V +Q Sbjct: 148 TYTGDAGRNKKEAEQLAARTVILSILGNSGSGTLLSEIIKSKVKLYAALHRVKDPSYIHTGILPIGLTS----GIPPCKGKEVEVAPGTDQLLPTAVSVPLSGQLVHVPVTHPPVHELEKPKPNVSSEVIAPPISFVPSVFEQ 286 The following BLAST results are available for this feature:
BLAST of CV091359 vs. TrEMBL
Analysis Date: 2011-01-18 (BLAST: Vaccinium corymbosum unigene v1 vs TrEMBL) Total hits: 3
BLAST of CV091359 vs. Vitis vinifera peptide
Analysis Date: 2011-01-25 (BLAST: Vaccinium corymbosum unigene v1 vs Vitis vinifera peptide) Total hits: 1
InterPro
Analysis Name: InterProScan analysis for Vaccinium corymbosum unigene v1
Date Performed: 2011-01-18
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CV091359 ID=CV091359; Name=CV091359; organism=Vaccinium corymbosum; type=EST; length=760bpback to top Annotated Terms
The
following terms have been associated with
this EST:
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