CV189843 | GDV

EST Overview


Name	CV189843
Unique Name	CV189843
Type	EST
Organism	Vaccinium corymbosum (northern highbush blueberry)
Sequence length	651

Libraries


Library Name	Type
LIBEST_016374 Vco01	cdna_library

Unigenes

This EST is part of the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
	Vaccinium corymbosum unigene v1	EST

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
Vaccinium corymbosum unigene v1	2011-01-18
BLAST: Vaccinium corymbosum unigene v1 vs Ppersica v1.0 peptide	2011-01-18
BLAST: Vaccinium corymbosum unigene v1 vs Swissprot	2011-01-18
BLAST: Vaccinium corymbosum unigene v1 vs Populus trichocarpa v2.0 peptide	2011-01-18
BLAST: Vaccinium corymbosum unigene v1 vs TrEMBL	2011-01-18
BLAST: Vaccinium corymbosum unigene v1 vs Vitis vinifera peptide	2011-01-25
BLAST: Vaccinium corymbosum unigene v1 vs TAIR 10 peptide	2011-02-10

Homology

[Close]

BLAST of CV189843 vs. DB:swissprot:display
Match: RAP22_ARATH (Ethylene-responsive transcription factor RAP2-2 OS=Arabidopsis thaliana GN=RAP2-2 PE=2 SV=2)

HSP 1 Score: 84.3445 bits (207), Expect = 5.886e-16
Identity = 53/128 (41.41%), Postives = 71/128 (55.47%), Query Frame = -2

Query:  264 YLNSDQGSNSFDCSDFGWGDYNAKTPEISSLLSATIEGDETQFVEDANPTKKLKTDSVDVGPVEANAVNNLSDKLSAFESEMKIFEIPYLDDN-WDA--SVDAFLSGDA---TQDGGDSIDLWAFDDL 629
            Y +SDQGSNSFDCS+FGW D+  KTPEISS+L   +  +E  FVE+ N  KKLK +S +            SD L A           YLD+  WD    V+A L  DA   TQ+  + ++LW+ D++
Sbjct:  270 YFSSDQGSNSFDCSEFGWSDHGPKTPEISSML---VNNNEASFVEETNAAKKLKPNSDE------------SDDLMA-----------YLDNALWDTPLEVEAMLGADAGAVTQEEENPVELWSLDEI 371

[Close]

BLAST of CV189843 vs. DB:swissprot:display
Match: RA212_ARATH (Ethylene-responsive transcription factor RAP2-12 OS=Arabidopsis thaliana GN=RAP2-12 PE=2 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 2.921e-15
Identity = 53/125 (42.40%), Postives = 68/125 (54.40%), Query Frame = -2

Query:  264 YLNSDQGSNSFDCSDFGWGDYNAKTPEISSLLSATIEGDETQFVEDANPTKKLKTDSVDVGPVEANAVNNLSDKLSAFESEMKIFEIPYLDDNWDASVDAFLSGDA--TQD-GGDSIDLWAFDDL 629
            Y +SDQGSNSFDCS+FGW D    TP+ISS  +     +   F E+ANP KKLK  S+D                         FE PY +  WDAS+D FL+ DA  TQD G + +DLW+ D++
Sbjct:  256 YFSSDQGSNSFDCSEFGWSDQAPITPDISS--AVINNNNSALFFEEANPAKKLK--SMD-------------------------FETPYNNTEWDASLD-FLNEDAVTTQDNGANPMDLWSIDEI 350

[Close]

BLAST of CV189843 vs. DB:swissprot:display
Match: ERF1_ORYSJ (Ethylene-responsive transcription factor 1 OS=Oryza sativa subsp. japonica GN=EREBP1 PE=1 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 9.397e-14
Identity = 50/124 (40.32%), Postives = 72/124 (58.06%), Query Frame = -2

Query:  264 LNSDQGSNSFDCSDFGWGDYNAKTPEISSL--LSATIEGDETQFVEDA-NPTKKLKTDSVDVGPVEANAVNNLSDKLSAFESEMKIFEIPYLDDNWDASVDAFLSGDATQDGGDSIDLWAFDDL 626
            +NSDQGSNSF CSDFGW + + KTP+I+S+  +S   E DE+ F++ + NP          V PV  N+  +L D     E  M+      LDD    S+D+ L+ D +QD   ++DLW+FDD+
Sbjct:  254 INSDQGSNSFGCSDFGW-ENDTKTPDITSIAPISTIAEVDESAFIKSSTNPM---------VPPVMENSAVDLPD----LEPYMRFL----LDDGAGDSIDSLLNLDGSQDVVSNMDLWSFDDM 359

[Close]

BLAST of CV189843 vs. Populus trichocarpa peptide v2.0
Match: POPTR_0003s06930.5 ()

HSP 1 Score: 134.806 bits (338), Expect = 4.411e-32
Identity = 73/137 (53.28%), Postives = 100/137 (72.99%), Query Frame = -2

Query:  249 PSDGASLYLNSDQGSNSFDCSDFGWGDYNAKTPEISSLLSATIEGDETQFVEDANPTKKLKTDSVDVGPVEANAVNNLSDKLSAFESEMKIFEIPYLDDNWDASVDAFLSGDATQDGGDSIDLWAFDD---LVAGAY 650
            PSD AS+Y NSD+GSNSFDC DFGWG+     PEI S+L+AT E DE+ FV DANP KKLK+ S +  PVE     +LS++L AF++++   ++P L  NW+AS+D+FL+GD TQDG +++DLW+F+D   +V G Y
Sbjct:  250 PSDNASMYFNSDKGSNSFDC-DFGWGEQG---PEILSVLAATPEVDESVFV-DANP-KKLKSYSENAVPVEEKNGKSLSEELLAFDNQLMNLQMPDLVGNWEASLDSFLNGDTTQDGTNAVDLWSFEDFPSMVGGVY 380

[Close]

BLAST of CV189843 vs. Populus trichocarpa peptide v2.0
Match: POPTR_0003s06930.4 ()

HSP 1 Score: 134.806 bits (338), Expect = 4.411e-32
Identity = 73/137 (53.28%), Postives = 100/137 (72.99%), Query Frame = -2

Query:  249 PSDGASLYLNSDQGSNSFDCSDFGWGDYNAKTPEISSLLSATIEGDETQFVEDANPTKKLKTDSVDVGPVEANAVNNLSDKLSAFESEMKIFEIPYLDDNWDASVDAFLSGDATQDGGDSIDLWAFDD---LVAGAY 650
            PSD AS+Y NSD+GSNSFDC DFGWG+     PEI S+L+AT E DE+ FV DANP KKLK+ S +  PVE     +LS++L AF++++   ++P L  NW+AS+D+FL+GD TQDG +++DLW+F+D   +V G Y
Sbjct:  250 PSDNASMYFNSDKGSNSFDC-DFGWGEQG---PEILSVLAATPEVDESVFV-DANP-KKLKSYSENAVPVEEKNGKSLSEELLAFDNQLMNLQMPDLVGNWEASLDSFLNGDTTQDGTNAVDLWSFEDFPSMVGGVY 380

[Close]

BLAST of CV189843 vs. Populus trichocarpa peptide v2.0
Match: POPTR_0003s06930.3 ()

HSP 1 Score: 134.806 bits (338), Expect = 4.411e-32
Identity = 73/137 (53.28%), Postives = 100/137 (72.99%), Query Frame = -2

Query:  249 PSDGASLYLNSDQGSNSFDCSDFGWGDYNAKTPEISSLLSATIEGDETQFVEDANPTKKLKTDSVDVGPVEANAVNNLSDKLSAFESEMKIFEIPYLDDNWDASVDAFLSGDATQDGGDSIDLWAFDD---LVAGAY 650
            PSD AS+Y NSD+GSNSFDC DFGWG+     PEI S+L+AT E DE+ FV DANP KKLK+ S +  PVE     +LS++L AF++++   ++P L  NW+AS+D+FL+GD TQDG +++DLW+F+D   +V G Y
Sbjct:  250 PSDNASMYFNSDKGSNSFDC-DFGWGEQG---PEILSVLAATPEVDESVFV-DANP-KKLKSYSENAVPVEEKNGKSLSEELLAFDNQLMNLQMPDLVGNWEASLDSFLNGDTTQDGTNAVDLWSFEDFPSMVGGVY 380

[Close]

BLAST of CV189843 vs. Populus trichocarpa peptide v2.0
Match: POPTR_0003s06930.2 ()

HSP 1 Score: 134.806 bits (338), Expect = 4.411e-32
Identity = 73/137 (53.28%), Postives = 100/137 (72.99%), Query Frame = -2

Query:  249 PSDGASLYLNSDQGSNSFDCSDFGWGDYNAKTPEISSLLSATIEGDETQFVEDANPTKKLKTDSVDVGPVEANAVNNLSDKLSAFESEMKIFEIPYLDDNWDASVDAFLSGDATQDGGDSIDLWAFDD---LVAGAY 650
            PSD AS+Y NSD+GSNSFDC DFGWG+     PEI S+L+AT E DE+ FV DANP KKLK+ S +  PVE     +LS++L AF++++   ++P L  NW+AS+D+FL+GD TQDG +++DLW+F+D   +V G Y
Sbjct:  250 PSDNASMYFNSDKGSNSFDC-DFGWGEQG---PEILSVLAATPEVDESVFV-DANP-KKLKSYSENAVPVEEKNGKSLSEELLAFDNQLMNLQMPDLVGNWEASLDSFLNGDTTQDGTNAVDLWSFEDFPSMVGGVY 380

[Close]

BLAST of CV189843 vs. Populus trichocarpa peptide v2.0
Match: POPTR_0003s06930.1 ()

HSP 1 Score: 134.806 bits (338), Expect = 4.411e-32
Identity = 73/137 (53.28%), Postives = 100/137 (72.99%), Query Frame = -2

Query:  249 PSDGASLYLNSDQGSNSFDCSDFGWGDYNAKTPEISSLLSATIEGDETQFVEDANPTKKLKTDSVDVGPVEANAVNNLSDKLSAFESEMKIFEIPYLDDNWDASVDAFLSGDATQDGGDSIDLWAFDD---LVAGAY 650
            PSD AS+Y NSD+GSNSFDC DFGWG+     PEI S+L+AT E DE+ FV DANP KKLK+ S +  PVE     +LS++L AF++++   ++P L  NW+AS+D+FL+GD TQDG +++DLW+F+D   +V G Y
Sbjct:  250 PSDNASMYFNSDKGSNSFDC-DFGWGEQG---PEILSVLAATPEVDESVFV-DANP-KKLKSYSENAVPVEEKNGKSLSEELLAFDNQLMNLQMPDLVGNWEASLDSFLNGDTTQDGTNAVDLWSFEDFPSMVGGVY 380

[Close]

BLAST of CV189843 vs. Populus trichocarpa peptide v2.0
Match: POPTR_0001s16400.1 ()

HSP 1 Score: 116.316 bits (290), Expect = 1.623e-26
Identity = 64/138 (46.38%), Postives = 94/138 (68.12%), Query Frame = -2

Query:  249 PSDGASLYLNSDQGSNSFDCSDFGWGDYNAKTPEISSLLSATIEGDETQFVEDANPTKKLKTDSVDVGPVEANAVNNLSDKLSAFESEMKIFEIPYLD-DNWDASVDAFLSGDATQDGGDSIDLWAFDD---LVAGAY 650
            PSD A +  NSDQGSNSFDC DFGWG+    TPE  ++L+AT E DE      ANP ++L++ S +  PVE     +LS++L AF+S++K  ++P  +  +W+AS+D+FL+ + TQDG +++DLW+FDD   +V G Y
Sbjct:  246 PSDSAPMCFNSDQGSNSFDC-DFGWGEQTPMTPESLTVLAATPEADEYLL---ANP-EELESYSENAVPVEEKNGKSLSEELLAFDSQLKYLQMPDAEGSSWEASLDSFLNVETTQDGTNAMDLWSFDDFPSMVGGVY 378

[Close]

BLAST of CV189843 vs. P. persica 1.0 peptide
Match: ppa007093m ()

HSP 1 Score: 179.874 bits (455), Expect = 8.452e-46
Identity = 86/135 (63.70%), Postives = 108/135 (80.00%), Query Frame = -2

Query:  249 PSDGASLYLNSDQGSNSFDCSDFGWGDYNAKTPEISSLLSATIE-GDETQFVEDANPTKKLKTDSVDVGPVEANAVNNLSDKLSAFESEMKIFEIPYLDDNWDASVDAFLSGDATQDGGDSIDLWAFDDLVAGAY 650
            PSD   LY +SDQGSNSFDCSDFGWG+  +KTPEISS+LS  +E  D++ F+EDA+PTKKLK++  D+ PV+ NA   L+D+LSAFE  MK F+ PYLD +WDASVDAFLS DATQDGG+S+D W+FDDL+ G +
Sbjct:  250 PSDAVPLYFSSDQGSNSFDCSDFGWGEQGSKTPEISSVLSCVMEESDDSLFLEDASPTKKLKSNPEDLVPVQDNAGKTLTDELSAFE--MKYFQTPYLDGSWDASVDAFLSTDATQDGGNSVDFWSFDDLIGGGF 382

[Close]

BLAST of CV189843 vs. P. persica 1.0 peptide
Match: ppa007106m ()

HSP 1 Score: 179.874 bits (455), Expect = 8.452e-46
Identity = 86/135 (63.70%), Postives = 108/135 (80.00%), Query Frame = -2

Query:  249 PSDGASLYLNSDQGSNSFDCSDFGWGDYNAKTPEISSLLSATIE-GDETQFVEDANPTKKLKTDSVDVGPVEANAVNNLSDKLSAFESEMKIFEIPYLDDNWDASVDAFLSGDATQDGGDSIDLWAFDDLVAGAY 650
            PSD   LY +SDQGSNSFDCSDFGWG+  +KTPEISS+LS  +E  D++ F+EDA+PTKKLK++  D+ PV+ NA   L+D+LSAFE  MK F+ PYLD +WDASVDAFLS DATQDGG+S+D W+FDDL+ G +
Sbjct:  250 PSDAVPLYFSSDQGSNSFDCSDFGWGEQGSKTPEISSVLSCVMEESDDSLFLEDASPTKKLKSNPEDLVPVQDNAGKTLTDELSAFE--MKYFQTPYLDGSWDASVDAFLSTDATQDGGNSVDFWSFDDLIGGGF 382

[Close]

BLAST of CV189843 vs. P. persica 1.0 peptide
Match: ppa006366m ()

HSP 1 Score: 178.718 bits (452), Expect = 1.883e-45
Identity = 86/133 (64.66%), Postives = 107/133 (80.45%), Query Frame = -2

Query:  255 PSDGASLYLNSDQGSNSFDCSDFGWGDYNAKTPEISSLLSATIE-GDETQFVEDANPTKKLKTDSVDVGPVEANAVNNLSDKLSAFESEMKIFEIPYLDDNWDASVDAFLSGDATQDGGDSIDLWAFDDLVAG 650
            PSD   LY +SDQGSNSFDCSDFGWG+  +KTPEISS+LS  +E  D++ F+EDA+PTKKLK++  D+ PV+ NA   L+D+LSAFE  MK F+ PYLD +WDASVDAFLS DATQDGG+S+D W+FDDL+ G
Sbjct:  250 PSDAVPLYFSSDQGSNSFDCSDFGWGEQGSKTPEISSVLSCVMEESDDSLFLEDASPTKKLKSNPEDLVPVQDNAGKTLTDELSAFE--MKYFQTPYLDGSWDASVDAFLSTDATQDGGNSVDFWSFDDLIGG 380

[Close]

BLAST of CV189843 vs. TrEMBL
Match: D3Y3F2|D3Y3F2_9ROSI (ERF transcription factor 3 OS=Vitis pseudoreticulata PE=2 SV=1)

HSP 1 Score: 185.267 bits (469), Expect = 3.557e-45
Identity = 85/129 (65.89%), Postives = 105/129 (81.40%), Query Frame = -2

Query:  264 PSDGASLYLNSDQGSNSFDCSDFGWGDYNAKTPEISSLLSATIEGDETQFVEDANPTKKLKTDSVDVGPVEANAVNNLSDKLSAFESEMKIFEIPYLDDNWDASVDAFLSGDATQDGGDSIDLWAFDDL 650
            PS+   +Y NSDQGSNSFDCSD GWG+  AKTPEISS+LSAT+EGDE+ F+EDA+P KKLK++S +  PVE N  N L + LSAFES+MK F+IPYLD +W+AS+D  LSGDA QDGG+ +DLW+FDDL
Sbjct:  240 PSENGRMYFNSDQGSNSFDCSDLGWGEQGAKTPEISSVLSATLEGDESLFIEDASPKKKLKSNSQNAVPVEENTPNGLFEDLSAFESQMKYFQIPYLDGSWEASMDPLLSGDAAQDGGNPMDLWSFDDL 368

[Close]

BLAST of CV189843 vs. TrEMBL
Match: O81365|O81365_PRUAR (AP2 domain containing protein (Fragment) OS=Prunus armeniaca GN=AP2DCP PE=2 SV=1)

HSP 1 Score: 183.341 bits (464), Expect = 1.352e-44
Identity = 88/135 (65.19%), Postives = 109/135 (80.74%), Query Frame = -2

Query:  249 PSDGASLYLNSDQGSNSFDCSDFGWGDYNAKTPEISSLLSATIE-GDETQFVEDANPTKKLKTDSVDVGPVEANAVNNLSDKLSAFESEMKIFEIPYLDDNWDASVDAFLSGDATQDGGDSIDLWAFDDLVAGAY 650
            PSD   LY  SDQGSNSFDCSDFGWG+  +KTPEISS+LS+ +E  D++ F+EDA+PTKKL+++  D+ PV+ NA   L+D+LSAFE  MK F+ PYLD +WDASVDAFLSGDATQDGG+S+DLW FDDLV G +
Sbjct:  148 PSDAVPLYFGSDQGSNSFDCSDFGWGEQGSKTPEISSVLSSVMEESDDSLFLEDASPTKKLRSNPEDLVPVQDNAGKTLTDELSAFE--MKYFQTPYLDGSWDASVDAFLSGDATQDGGNSVDLWCFDDLVGGGF 280

[Close]

BLAST of CV189843 vs. TrEMBL
Match: C0J9I7|C0J9I7_9ROSA (Ethylene responsive transcription factor 2a OS=Prunus salicina GN=ERF2a PE=2 SV=1)

HSP 1 Score: 181.415 bits (459), Expect = 5.137e-44
Identity = 87/135 (64.44%), Postives = 108/135 (80.00%), Query Frame = -2

Query:  249 PSDGASLYLNSDQGSNSFDCSDFGWGDYNAKTPEISSLLSATIE-GDETQFVEDANPTKKLKTDSVDVGPVEANAVNNLSDKLSAFESEMKIFEIPYLDDNWDASVDAFLSGDATQDGGDSIDLWAFDDLVAGAY 650
            PSD   LY +SDQGSNSFDCSDFGWG+  +KTPEISS+LS+ +E  D++ F+EDANPTKKLK++  D+ PV+ NA   LSD+LSAFE  MK F+ PYL  +WDASVDAFLS DATQDGG+S+D W+FDDL+ G +
Sbjct:  249 PSDAVPLYFSSDQGSNSFDCSDFGWGEQGSKTPEISSVLSSVMEESDDSLFLEDANPTKKLKSNPEDLVPVQDNAGKTLSDELSAFE--MKYFQTPYLGGSWDASVDAFLSADATQDGGNSVDFWSFDDLIGGGF 381

[Close]

BLAST of CV189843 vs. TrEMBL
Match: D5L139|D5L139_MALDO (AP2 domain class transcription factor OS=Malus domestica GN=AP2D55 PE=2 SV=1)

HSP 1 Score: 176.022 bits (445), Expect = 2.158e-42
Identity = 84/132 (63.64%), Postives = 107/132 (81.06%), Query Frame = -2

Query:  258 PSDGASLYLNSDQGSNSFDCSDFGWGDYNAKTPEISSLLSATIE-GDETQFVEDANPTKKLKTDSVDVGPVEANAVNNLSDKLSAFESEMKIFEIPYLDDNWDASVDAFLSGDATQDGGDSIDLWAFDDLVA 650
            PS+ A  Y +SDQGSNSFDCSDFGWG+  +KTPEISS++S+ +E  D + F+ED+NPTKK+K +S D+ P E N+   LSD+LSAFE  MK F+ PYLD++WDASVDAFL+GDATQDGG+ +DLW+FDDL A
Sbjct:  251 PSENAPFYFSSDQGSNSFDCSDFGWGEQGSKTPEISSVISSVMEESDNSPFLEDSNPTKKMKPNSQDLEPPEDNSGKTLSDELSAFE--MKYFQTPYLDESWDASVDAFLNGDATQDGGNPMDLWSFDDLPA 380

[Close]

BLAST of CV189843 vs. TrEMBL
Match: D5L0Z5|D5L0Z5_MALDO (AP2 domain class transcription factor OS=Malus domestica GN=AP2D11 PE=2 SV=1)

HSP 1 Score: 172.94 bits (437), Expect = 1.827e-41
Identity = 88/132 (66.67%), Postives = 105/132 (79.55%), Query Frame = -2

Query:  258 PSDGASLYLNSDQGSNSFDCSDFGWGDYNAKTPEISSLLSATIEG-DETQFVEDANPTKKLKTDSVDVGPVEANAVNNLSDKLSAFESEMKIFEIPYLDDNWDASVDAFLSGDATQDGGDSIDLWAFDDLVA 650
            PSD A  YL+SDQGSNSFDCSDFGWG+  +KTPEISS+LS+ +E  D++ F+EDANPTKKLK +S D+   + NA   LSD+LSAFE  MK F+ PYLD +WDASVDAFL+GDATQDGG+  DLW FDDL A
Sbjct:  252 PSDPAPFYLSSDQGSNSFDCSDFGWGEQGSKTPEISSVLSSVMEETDDSLFLEDANPTKKLKPNSQDLVLPQDNAGKTLSDELSAFE--MKYFQTPYLDGSWDASVDAFLNGDATQDGGNPGDLWTFDDLPA 381

[Close]

BLAST of CV189843 vs. TrEMBL
Match: Q3L0R1|Q3L0R1_GOSHI (Ethylene-responsive element binding protein ERF2 OS=Gossypium hirsutum PE=2 SV=2)

HSP 1 Score: 168.703 bits (426), Expect = 3.446e-40
Identity = 79/128 (61.72%), Postives = 103/128 (80.47%), Query Frame = -2

Query:  267 SDGASLYLNSDQGSNSFDCSDFGWGDYNAKTPEISSLLSATIEGDETQFVEDANPTKKLKTDSVDVGPVEANAVNNLSDKLSAFESEMKIFEI-PYLDDNWDASVDAFLSGDATQDGGDSIDLWAFDD 647
            SD A LY NSDQGSNS +CSD+GWG+  AKTPEISS+L A++EGDE  F+EDANP+KKLK  S +V P E N+   LSD+L A +++MK F++ P+++ NWDA++DAFL+GDATQDGG+ +DLW FDD
Sbjct:  256 SDNAPLYFNSDQGSNSINCSDYGWGEQGAKTPEISSILEASVEGDE--FLEDANPSKKLKPSSDNVMPAEDNSAKTLSDELLALDNQMKYFQMPPFIEGNWDATIDAFLNGDATQDGGNPMDLWNFDD 381

[Close]

BLAST of CV189843 vs. TrEMBL
Match: C6K6J7|C6K6J7_MORAL (Ethylene signal transcription factor OS=Morus alba PE=2 SV=1)

HSP 1 Score: 167.162 bits (422), Expect = 1.003e-39
Identity = 77/128 (60.16%), Postives = 102/128 (79.69%), Query Frame = -2

Query:  267 PSDGASLYLNSDQGSNSFDCSDFGWGDYNAKTPEISSLLSATIEGDETQFVEDANPTKKLKTDSVDVGPVEANAVNNLSDKLSAFESEMKIFEIPYLDDNWDASVDAFLSGDATQDGGDSIDLWAFDD 650
            P+    LY +SDQGSNSF+CSDFG G++ +KTPEISS+ SAT E D++ F+ED NPTKKLK+DS +    E N    LS++LSAFES+MK F++PYL+ +WDA +D FL+GD+TQDGG+SI+LW+FDD
Sbjct:  252 PAATTPLYFSSDQGSNSFECSDFGLGEHGSKTPEISSVFSATSENDDSLFLEDTNPTKKLKSDSENAVLPEENHAKTLSEELSAFESQMKFFQMPYLEGSWDALLDTFLAGDSTQDGGNSINLWSFDD 379

[Close]

BLAST of CV189843 vs. TrEMBL
Match: B9T4R8|B9T4R8_RICCO (Ethylene-responsive transcription factor, putative OS=Ricinus communis GN=RCOM_0043760 PE=4 SV=1)

HSP 1 Score: 166.777 bits (421), Expect = 1.309e-39
Identity = 80/131 (61.07%), Postives = 107/131 (81.68%), Query Frame = -2

Query:  249 LYLNSDQGSNSFDCSDFGWGDYNAKTPEISSLLSATIEGDETQFVEDANPTKKLKTDSVDVGPVEANAVNNLSDKLSAFESEMKIFEIPYLDDNWDASVDAFLSGDATQDGGDSIDLWAFDD---LVAGAY 632
            +Y NSDQGSNSFDCSDFGWG++ +KTPEISS+LSAT E DE+ FVEDANP K++K+DS DV PVE N   +LS++L AF+++ + F++PYL+ NW+ S+++FL+GD TQDGG+ +DLW+FDD   LV G Y
Sbjct:  255 MYFNSDQGSNSFDCSDFGWGEHASKTPEISSMLSATPEIDESLFVEDANPKKRMKSDSGDVMPVEDNG-KSLSEELLAFDNQ-ENFQVPYLEGNWETSLESFLNGDTTQDGGNPVDLWSFDDLPSLVGGVY 383

[Close]

BLAST of CV189843 vs. TrEMBL
Match: Q70AB2|Q70AB2_FAGSY (Ethylene transcription factor OS=Fagus sylvatica GN=erf1 PE=2 SV=1)

HSP 1 Score: 164.851 bits (416), Expect = 4.976e-39
Identity = 78/128 (60.94%), Postives = 105/128 (82.03%), Query Frame = -2

Query:  264 SDGASLYLNSDQGSNSFDCSDFGWGDYNAKTPEISSLLSATIEGDETQFVEDANPTKKLKTDSVDVGPVEANAVNNLSDKLSAFESEMKIFEIPYLDDNWDASVDAFLSGDATQDGGDSIDLWAFDDL 647
            S+  + Y NSDQGSNSFDCSD+GWG+  +KTPEISS+LSAT+EGDE+QFVEDA PTKKLK+DS +   +E N    LS++LSAFES+M  F++P+L+ +W+++++A  SGD TQD G+S+DLW+FDDL
Sbjct:  245 SNNTTPYFNSDQGSNSFDCSDYGWGEQGSKTPEISSVLSATLEGDESQFVEDAMPTKKLKSDSGNAVFIENNTAKTLSEELSAFESQMN-FQMPFLEGSWESNMEALFSGDTTQD-GNSMDLWSFDDL 370

[Close]

BLAST of CV189843 vs. TrEMBL
Match: Q8VXK9|Q8VXK9_FAGSY (Ethylene responsive element binding protein OS=Fagus sylvatica GN=erebp1 PE=2 SV=1)

HSP 1 Score: 164.466 bits (415), Expect = 6.498e-39
Identity = 78/128 (60.94%), Postives = 105/128 (82.03%), Query Frame = -2

Query:  264 SDGASLYLNSDQGSNSFDCSDFGWGDYNAKTPEISSLLSATIEGDETQFVEDANPTKKLKTDSVDVGPVEANAVNNLSDKLSAFESEMKIFEIPYLDDNWDASVDAFLSGDATQDGGDSIDLWAFDDL 647
            S+  + Y NSDQGSNSFDCSD+GWG+  +KTPEISS+LSAT+EGDE+QFVEDA PTKKLK+DS +   +E N    LS++LSAFES+M  F++P+L+ +W+++++A  SGD TQD G+S+DLW+FDDL
Sbjct:  242 SNNTAPYFNSDQGSNSFDCSDYGWGEQGSKTPEISSVLSATLEGDESQFVEDAVPTKKLKSDSGNAVFIENNTAKTLSEELSAFESQMN-FQMPFLEGSWESNMEALFSGDTTQD-GNSMDLWSFDDL 367

[Close]

BLAST of CV189843 vs. Vitis vinifera peptide
Match: GSVIVT01016684001 (assembled CDS)

HSP 1 Score: 146.362 bits (368), Expect = 8.850e-36
Identity = 73/123 (59.35%), Postives = 85/123 (69.11%), Query Frame = -2

Query:  264 LYLNSDQGSNSFDCSDFGWGDYNAKTPEISSLLSATIEGDETQFVEDANPTKKLKTDSVDVGPVEANAVNNLSDKLSAFESEMKIFEIPYLDDNWDASVDAFLSGDATQDGGDSIDLWAFDDL 632
            +Y NSDQGSNSFDCSD GWG+  AKTPEISS+LSAT+E                        PVE N  N LS+ LSAFES+MK F+IPYLD NW+AS+DA LSGDA QDGG+ +DLW+FDDL
Sbjct:    1 MYFNSDQGSNSFDCSDLGWGEQGAKTPEISSVLSATLEV-----------------------PVEENTPNGLSEDLSAFESQMKYFQIPYLDGNWEASMDALLSGDAAQDGGNPMDLWSFDDL 100

[Close]

BLAST of CV189843 vs. TAIR peptide
Match: AT3G14230.3 (| Symbols: RAP2.2 | related to AP2 2 | chr3:4737616-4739000 REVERSE LENGTH=374)

HSP 1 Score: 84.3445 bits (207), Expect = 6.018e-17
Identity = 53/128 (41.41%), Postives = 71/128 (55.47%), Query Frame = -2

Query:  264 YLNSDQGSNSFDCSDFGWGDYNAKTPEISSLLSATIEGDETQFVEDANPTKKLKTDSVDVGPVEANAVNNLSDKLSAFESEMKIFEIPYLDDN-WDA--SVDAFLSGDA---TQDGGDSIDLWAFDDL 629
            Y +SDQGSNSFDCS+FGW D+  KTPEISS+L   +  +E  FVE+ N  KKLK +S +            SD L A           YLD+  WD    V+A L  DA   TQ+  + ++LW+ D++
Sbjct:  265 YFSSDQGSNSFDCSEFGWSDHGPKTPEISSML---VNNNEASFVEETNAAKKLKPNSDE------------SDDLMA-----------YLDNALWDTPLEVEAMLGADAGAVTQEEENPVELWSLDEI 366

[Close]

BLAST of CV189843 vs. TAIR peptide
Match: AT3G14230.2 (| Symbols: RAP2.2 | related to AP2 2 | chr3:4737616-4739000 REVERSE LENGTH=375)

HSP 1 Score: 84.3445 bits (207), Expect = 6.018e-17
Identity = 53/128 (41.41%), Postives = 71/128 (55.47%), Query Frame = -2

Query:  264 YLNSDQGSNSFDCSDFGWGDYNAKTPEISSLLSATIEGDETQFVEDANPTKKLKTDSVDVGPVEANAVNNLSDKLSAFESEMKIFEIPYLDDN-WDA--SVDAFLSGDA---TQDGGDSIDLWAFDDL 629
            Y +SDQGSNSFDCS+FGW D+  KTPEISS+L   +  +E  FVE+ N  KKLK +S +            SD L A           YLD+  WD    V+A L  DA   TQ+  + ++LW+ D++
Sbjct:  266 YFSSDQGSNSFDCSEFGWSDHGPKTPEISSML---VNNNEASFVEETNAAKKLKPNSDE------------SDDLMA-----------YLDNALWDTPLEVEAMLGADAGAVTQEEENPVELWSLDEI 367

[Close]

BLAST of CV189843 vs. TAIR peptide
Match: AT3G14230.1 (| Symbols: RAP2.2 | related to AP2 2 | chr3:4737616-4739000 REVERSE LENGTH=379)

HSP 1 Score: 84.3445 bits (207), Expect = 6.018e-17
Identity = 53/128 (41.41%), Postives = 71/128 (55.47%), Query Frame = -2

Query:  264 YLNSDQGSNSFDCSDFGWGDYNAKTPEISSLLSATIEGDETQFVEDANPTKKLKTDSVDVGPVEANAVNNLSDKLSAFESEMKIFEIPYLDDN-WDA--SVDAFLSGDA---TQDGGDSIDLWAFDDL 629
            Y +SDQGSNSFDCS+FGW D+  KTPEISS+L   +  +E  FVE+ N  KKLK +S +            SD L A           YLD+  WD    V+A L  DA   TQ+  + ++LW+ D++
Sbjct:  270 YFSSDQGSNSFDCSEFGWSDHGPKTPEISSML---VNNNEASFVEETNAAKKLKPNSDE------------SDDLMA-----------YLDNALWDTPLEVEAMLGADAGAVTQEEENPVELWSLDEI 371

[Close]

BLAST of CV189843 vs. TAIR peptide
Match: AT1G53910.3 (| Symbols: RAP2.12 | related to AP2 12 | chr1:20135242-20136581 FORWARD LENGTH=356)

HSP 1 Score: 82.0333 bits (201), Expect = 2.987e-16
Identity = 53/125 (42.40%), Postives = 68/125 (54.40%), Query Frame = -2

Query:  264 YLNSDQGSNSFDCSDFGWGDYNAKTPEISSLLSATIEGDETQFVEDANPTKKLKTDSVDVGPVEANAVNNLSDKLSAFESEMKIFEIPYLDDNWDASVDAFLSGDA--TQD-GGDSIDLWAFDDL 629
            Y +SDQGSNSFDCS+FGW D    TP+ISS  +     +   F E+ANP KKLK  S+D                         FE PY +  WDAS+D FL+ DA  TQD G + +DLW+ D++
Sbjct:  254 YFSSDQGSNSFDCSEFGWSDQAPITPDISS--AVINNNNSALFFEEANPAKKLK--SMD-------------------------FETPYNNTEWDASLD-FLNEDAVTTQDNGANPMDLWSIDEI 348

[Close]

BLAST of CV189843 vs. TAIR peptide
Match: AT1G53910.2 (| Symbols: RAP2.12 | related to AP2 12 | chr1:20135242-20136581 FORWARD LENGTH=358)

HSP 1 Score: 82.0333 bits (201), Expect = 2.987e-16
Identity = 53/125 (42.40%), Postives = 68/125 (54.40%), Query Frame = -2

Query:  264 YLNSDQGSNSFDCSDFGWGDYNAKTPEISSLLSATIEGDETQFVEDANPTKKLKTDSVDVGPVEANAVNNLSDKLSAFESEMKIFEIPYLDDNWDASVDAFLSGDA--TQD-GGDSIDLWAFDDL 629
            Y +SDQGSNSFDCS+FGW D    TP+ISS  +     +   F E+ANP KKLK  S+D                         FE PY +  WDAS+D FL+ DA  TQD G + +DLW+ D++
Sbjct:  256 YFSSDQGSNSFDCSEFGWSDQAPITPDISS--AVINNNNSALFFEEANPAKKLK--SMD-------------------------FETPYNNTEWDASLD-FLNEDAVTTQDNGANPMDLWSIDEI 350

[Close]

BLAST of CV189843 vs. TAIR peptide
Match: AT1G53910.1 (| Symbols: RAP2.12 | related to AP2 12 | chr1:20135242-20136581 FORWARD LENGTH=358)

HSP 1 Score: 82.0333 bits (201), Expect = 2.987e-16
Identity = 53/125 (42.40%), Postives = 68/125 (54.40%), Query Frame = -2

Query:  264 YLNSDQGSNSFDCSDFGWGDYNAKTPEISSLLSATIEGDETQFVEDANPTKKLKTDSVDVGPVEANAVNNLSDKLSAFESEMKIFEIPYLDDNWDASVDAFLSGDA--TQD-GGDSIDLWAFDDL 629
            Y +SDQGSNSFDCS+FGW D    TP+ISS  +     +   F E+ANP KKLK  S+D                         FE PY +  WDAS+D FL+ DA  TQD G + +DLW+ D++
Sbjct:  256 YFSSDQGSNSFDCSEFGWSDQAPITPDISS--AVINNNNSALFFEEANPAKKLK--SMD-------------------------FETPYNNTEWDASLD-FLNEDAVTTQDNGANPMDLWSIDEI 350

The following BLAST results are available for this feature:

BLAST of CV189843 vs. DB:swissprot:display
BLAST of CV189843 vs. Populus trichocarpa peptide v2.0
BLAST of CV189843 vs. P. persica 1.0 peptide
BLAST of CV189843 vs. TrEMBL
BLAST of CV189843 vs. Vitis vinifera peptide
BLAST of CV189843 vs. TAIR peptide

BLAST of CV189843 vs. DB:swissprot:display
Analysis Date: 2011-01-18 (BLAST: Vaccinium corymbosum unigene v1 vs Swissprot)
Total hits: 3


Match Name	E-value	Identity	Description
RAP22_ARATH	5.886e-16	41.41	Ethylene-responsive transcription factor RAP2-2 OS...	[more]
RA212_ARATH	2.921e-15	42.40	Ethylene-responsive transcription factor RAP2-12 O...	[more]
ERF1_ORYSJ	9.397e-14	40.32	Ethylene-responsive transcription factor 1 OS=Oryz...	[more]

BLAST of CV189843 vs. Populus trichocarpa peptide v2.0
Analysis Date: 2011-01-18 (BLAST: Vaccinium corymbosum unigene v1 vs Populus trichocarpa v2.0 peptide)
Total hits: 6


Match Name	E-value	Identity
POPTR_0003s06930.5	4.411e-32	53.28	[more]
POPTR_0003s06930.4	4.411e-32	53.28	[more]
POPTR_0003s06930.3	4.411e-32	53.28	[more]
POPTR_0003s06930.2	4.411e-32	53.28	[more]
POPTR_0003s06930.1	4.411e-32	53.28	[more]
POPTR_0001s16400.1	1.623e-26	46.38	[more]

BLAST of CV189843 vs. P. persica 1.0 peptide
Analysis Date: 2011-01-18 (BLAST: Vaccinium corymbosum unigene v1 vs Ppersica v1.0 peptide)
Total hits: 3


Match Name	E-value	Identity
ppa007093m	8.452e-46	63.70	[more]
ppa007106m	8.452e-46	63.70	[more]
ppa006366m	1.883e-45	64.66	[more]

BLAST of CV189843 vs. TrEMBL
Analysis Date: 2011-01-18 (BLAST: Vaccinium corymbosum unigene v1 vs TrEMBL)
Total hits: 10


Match Name	E-value	Identity	Description
D3Y3F2\|D3Y3F2_9ROSI	3.557e-45	65.89	ERF transcription factor 3 OS=Vitis pseudoreticula...	[more]
O81365\|O81365_PRUAR	1.352e-44	65.19	AP2 domain containing protein (Fragment) OS=Prunus...	[more]
C0J9I7\|C0J9I7_9ROSA	5.137e-44	64.44	Ethylene responsive transcription factor 2a OS=Pru...	[more]
D5L139\|D5L139_MALDO	2.158e-42	63.64	AP2 domain class transcription factor OS=Malus dom...	[more]
D5L0Z5\|D5L0Z5_MALDO	1.827e-41	66.67	AP2 domain class transcription factor OS=Malus dom...	[more]
Q3L0R1\|Q3L0R1_GOSHI	3.446e-40	61.72	Ethylene-responsive element binding protein ERF2 O...	[more]
C6K6J7\|C6K6J7_MORAL	1.003e-39	60.16	Ethylene signal transcription factor OS=Morus alba...	[more]
B9T4R8\|B9T4R8_RICCO	1.309e-39	61.07	Ethylene-responsive transcription factor, putative...	[more]
Q70AB2\|Q70AB2_FAGSY	4.976e-39	60.94	Ethylene transcription factor OS=Fagus sylvatica G...	[more]
Q8VXK9\|Q8VXK9_FAGSY	6.498e-39	60.94	Ethylene responsive element binding protein OS=Fag...	[more]

BLAST of CV189843 vs. Vitis vinifera peptide
Analysis Date: 2011-01-25 (BLAST: Vaccinium corymbosum unigene v1 vs Vitis vinifera peptide)
Total hits: 1


Match Name	E-value	Identity	Description
GSVIVT01016684001	8.850e-36	59.35	assembled CDS	[more]

BLAST of CV189843 vs. TAIR peptide
Analysis Date: 2011-02-10 (BLAST: Vaccinium corymbosum unigene v1 vs TAIR 10 peptide)
Total hits: 6


Match Name	E-value	Identity	Description
AT3G14230.3	6.018e-17	41.41	\| Symbols: RAP2.2 \| related to AP2 2 \| chr3:473761...	[more]
AT3G14230.2	6.018e-17	41.41	\| Symbols: RAP2.2 \| related to AP2 2 \| chr3:473761...	[more]
AT3G14230.1	6.018e-17	41.41	\| Symbols: RAP2.2 \| related to AP2 2 \| chr3:473761...	[more]
AT1G53910.3	2.987e-16	42.40	\| Symbols: RAP2.12 \| related to AP2 12 \| chr1:2013...	[more]
AT1G53910.2	2.987e-16	42.40	\| Symbols: RAP2.12 \| related to AP2 12 \| chr1:2013...	[more]
AT1G53910.1	2.987e-16	42.40	\| Symbols: RAP2.12 \| related to AP2 12 \| chr1:2013...	[more]

Properties


Property Name	Value
Singlet in analysis	Vaccinium corymbosum unigene v1

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>CV189843 ID=CV189843; Name=CV189843; organism=Vaccinium corymbosum; type=EST; length=651bp
AGAACAGCAAATAACATAGGAAATATTGTCAAGCTTAATATAAGTTTCAT
AACATGACACTTCATCCATACAGACATCAAAGTTAAGATCCAAATTTTAA
GTCCCAAAATACCATAAACATAGTAAAACCAAGTACTCCCCCATACACAA
TTGATAAAACACCTTCATCTAAGGCTCAAGCCCGGATTTTATTGCTTTTC
AACGCCTCAGCAAACAACAAAAACAACCAGCTAGGTAAAGGTTGCTCAGT
ATGCTCCAGCAACCAAATCATCAAAGGCCCAAAGATCGATCGAGTCCCCA
CCATCCTGAGTAGCATCTCCGCTGAGAAATGCATCCACTGAAGCATCCCA
GTTGTCGTCAAGATACGGGATCTCAAAGATTTTCATTTCGGACTCAAAAG
CAGAAAGCTTGTCAGACAAATTATTCACAGCATTTGCTTCAACAGGTCCC
ACATCCACTGAATCAGTCTTCAGTTTCTTCGTAGGGTTAGCATCTTCCAC
AAATTGGGTTTCATCACCTTCTATGGTGGCAGAAAGAAGAGATGATATTT
CCGGTGTCTTTGCATTATAGTCTCCCCACCCAAAGTCAGAACAGTCGAAT
GAGTTGCTTCCTTGATCCGAATTCAAATAAAGGGAAGCACCATCTGATGG
A