CV189850
EST Overview
Libraries
Unigenes
This EST is part of the following unigenes:
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CV189850 vs. P. persica 1.0 peptide
Match: ppb021546m () HSP 1 Score: 63.929 bits (154), Expect = 6.613e-11 Identity = 36/87 (41.38%), Postives = 45/87 (51.72%), Query Frame = 1 Query: 385 KISAALSDKGYVAMXXXXXXXXXXXXAA---EXXXXXXXXXVFCPPDKAFFTLKYPQAPITLLKYHIVPSNLDRESLESSLPDESQI 636 K SA LSDKGY AM +FCP D+AFF KYPQ P+TLLKYHIVP DR+++E+ + S + Sbjct: 61 KPSAVLSDKGYHAMSLTLDTILEAVIMPAIQSLNHTNTTFTLFCPRDQAFFNSKYPQPPLTLLKYHIVPFKFDRDTIEAYVGHGSNV 147
BLAST of CV189850 vs. P. persica 1.0 peptide
Match: ppa021285m () HSP 1 Score: 53.9138 bits (128), Expect = 6.844e-8 Identity = 24/40 (60.00%), Postives = 31/40 (77.50%), Query Frame = 1 Query: 499 VFCPPDKAFFTLKYPQAP-ITLLKYHIVPSNLDRESLESS 615 +FCP D+AFF KYPQ P +TLLKYHIVP +D ++E+S Sbjct: 53 LFCPQDQAFFNSKYPQPPPLTLLKYHIVPFKIDPHTMEAS 92
BLAST of CV189850 vs. TrEMBL
Match: A5BK40|A5BK40_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_043604 PE=4 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 2.006e-13 Identity = 43/105 (40.95%), Postives = 59/105 (56.19%), Query Frame = 1 Query: 325 PSKETLTNLNHHQLHGLEIEKISAALSDKGYVAMXXXXXXXXXXXXA-AEXXXXXXXXXVFCPPDKAFFTLKYPQAPITLLKYHIVPSNLDRESLESSLPDESQI 636 P+ H++ IE IS ALSDKGY++M +E +FCPP+KAF LKYPQ P+TLL+Y I PS L+RE+LESSL ++++ Sbjct: 26 PTARATEPXTSHEIEVFNIEAISNALSDKGYLSMALSLQLALKSNLIPSEVSDDNTRVTIFCPPNKAFSELKYPQPPLTLLQYQISPSELNREALESSLGPDAKV 130
BLAST of CV189850 vs. TrEMBL
Match: D7U1H8|D7U1H8_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_37.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00023712001 PE=4 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 2.620e-13 Identity = 42/94 (44.68%), Postives = 57/94 (60.64%), Query Frame = 1 Query: 358 HQLHGLEIEKISAALSDKGYVAMXXXXXXXXXXXXA-AEXXXXXXXXXVFCPPDKAFFTLKYPQAPITLLKYHIVPSNLDRESLESSLPDESQI 636 H++ IE IS ALSDKGY++M +E +FCPP+KAF LKYPQ P+TLL+Y I PS L+RE+LESSL ++++ Sbjct: 54 HEIEVFNIEAISNALSDKGYLSMALSLQLALKSNLIPSEVRDDNTRVTIFCPPNKAFSELKYPQPPLTLLQYQISPSELNREALESSLGPDAKV 147
BLAST of CV189850 vs. Vitis vinifera peptide
Match: GSVIVT01023712001 (assembled CDS) HSP 1 Score: 79.337 bits (194), Expect = 1.301e-15 Identity = 42/94 (44.68%), Postives = 57/94 (60.64%), Query Frame = 1 Query: 358 HQLHGLEIEKISAALSDKGYVAMXXXXXXXXXXXXA-AEXXXXXXXXXVFCPPDKAFFTLKYPQAPITLLKYHIVPSNLDRESLESSLPDESQI 636 H++ IE IS ALSDKGY++M +E +FCPP+KAF LKYPQ P+TLL+Y I PS L+RE+LESSL ++++ Sbjct: 54 HEIEVFNIEAISNALSDKGYLSMALSLQLALKSNLIPSEVRDDNTRVTIFCPPNKAFSELKYPQPPLTLLQYQISPSELNREALESSLGPDAKV 147 The following BLAST results are available for this feature:
BLAST of CV189850 vs. P. persica 1.0 peptide
Analysis Date: 2011-01-18 (BLAST: Vaccinium corymbosum unigene v1 vs Ppersica v1.0 peptide) Total hits: 2
BLAST of CV189850 vs. TrEMBL
Analysis Date: 2011-01-18 (BLAST: Vaccinium corymbosum unigene v1 vs TrEMBL) Total hits: 2
BLAST of CV189850 vs. Vitis vinifera peptide
Analysis Date: 2011-01-25 (BLAST: Vaccinium corymbosum unigene v1 vs Vitis vinifera peptide) Total hits: 1
InterPro
Analysis Name: InterProScan analysis for Vaccinium corymbosum unigene v1
Date Performed: 2011-01-18
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CV189850 ID=CV189850; Name=CV189850; organism=Vaccinium corymbosum; type=EST; length=636bpback to top |