CV189919

EST Overview
NameCV189919
Unique NameCV189919
TypeEST
OrganismVaccinium corymbosum (northern highbush blueberry)
Sequence length437
Libraries
Library NameType
LIBEST_016374 Vco01cdna_library
Unigenes
This EST is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Vaccinium corymbosum unigene v1EST
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
Vaccinium corymbosum unigene v12011-01-18
BLAST: Vaccinium corymbosum unigene v1 vs Ppersica v1.0 peptide2011-01-18
BLAST: Vaccinium corymbosum unigene v1 vs TrEMBL2011-01-18
BLAST: Vaccinium corymbosum unigene v1 vs Vitis vinifera peptide2011-01-25
Homology
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BLAST of CV189919 vs. P. persica 1.0 peptide
Match: ppa026876m ()

HSP 1 Score: 56.6102 bits (135), Expect = 5.092e-9
Identity = 31/67 (46.27%), Postives = 46/67 (68.66%), Query Frame = 2 
Query:  236 MLHDYHKGSVKHLRIALCSRTPVYEALLPLVQMLLFAGHIDEAVNVLEKFGHSSQAALGLRAKASLL 436
            + +DY+  +VK+LR+AL S  PV  AL PL+Q+LL  G + EA+N L+ +  +S  AL +R +ASLL
Sbjct:  324 LFNDYYNVAVKYLRLALHSTPPVLVALHPLIQLLLIGGQVKEALNELD-YCCNSNTALHIRLRASLL 389
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BLAST of CV189919 vs. TrEMBL
Match: A5ART3|A5ART3_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_014528 PE=4 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 8.691e-13
Identity = 34/69 (49.28%), Postives = 52/69 (75.36%), Query Frame = 2 
Query:  230 RDMLHDYHKGSVKHLRIALCSRTPVYEALLPLVQMLLFAGHIDEAVNVLEKFGHSSQAALGLRAKASLL 436
            R++++DY+K +VK+L++AL S  P+  ALLP +Q+LL  G + EA+N LEKF H+S A L +R +AS+L
Sbjct:  392 RELINDYYKSAVKYLKLALYSTPPILAALLPFIQLLLLGGQVKEALNELEKFSHNSNATLPIRLRASVL 460
[Close]
BLAST of CV189919 vs. Vitis vinifera peptide
Match: GSVIVT01014249001 (assembled CDS)

HSP 1 Score: 76.6406 bits (187), Expect = 4.109e-15
Identity = 34/69 (49.28%), Postives = 52/69 (75.36%), Query Frame = 2 
Query:  230 RDMLHDYHKGSVKHLRIALCSRTPVYEALLPLVQMLLFAGHIDEAVNVLEKFGHSSQAALGLRAKASLL 436
            R++++DY+K +VK+L++AL S  P+  ALLP +Q+LL  G + EA+N LEKF H+S A L +R +AS+L
Sbjct:  387 RELINDYYKSAVKYLKLALYSTPPILAALLPFIQLLLLGGQVKEALNELEKFSHNSNATLPIRLRASVL 455
The following BLAST results are available for this feature:
BLAST of CV189919 vs. P. persica 1.0 peptide
Analysis Date: 2011-01-18 (BLAST: Vaccinium corymbosum unigene v1 vs Ppersica v1.0 peptide)
Total hits: 1
Match NameE-valueIdentityDescription
ppa026876m5.092e-946.27[more]
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BLAST of CV189919 vs. TrEMBL
Analysis Date: 2011-01-18 (BLAST: Vaccinium corymbosum unigene v1 vs TrEMBL)
Total hits: 1
Match NameE-valueIdentityDescription
A5ART3|A5ART3_VITVI8.691e-1349.28Putative uncharacterized protein OS=Vitis vinifera... [more]
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BLAST of CV189919 vs. Vitis vinifera peptide
Analysis Date: 2011-01-25 (BLAST: Vaccinium corymbosum unigene v1 vs Vitis vinifera peptide)
Total hits: 1
Match NameE-valueIdentityDescription
GSVIVT010142490014.109e-1549.28assembled CDS[more]
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Properties
Property NameValue
Singlet in analysisVaccinium corymbosum unigene v1
Sequences
The following sequences are available for this feature:

EST sequence

>CV189919 ID=CV189919; Name=CV189919; organism=Vaccinium corymbosum; type=EST; length=437bp
TGGATGATAGGGTACAGAAAGAAACCACCTACAGAAATCATGAGTCAATG
GGCTTCTACATGGATGCTGCTGAGGACAGTGGACATCCAAAGTCTCCTTA
GTCTGATTCTGGTGGCGATATGCAGTATGCATCTACTTTCAATAACCACG
GCTTGGATTCATGGTCGTAGCCATTTCAATTGTCGCAGTTCAAAGCAAAA
CTTTGAGGACGATAATAGGTTCTGCACAGAGGGACATGCTACACGACTAC
CATAAGGGTTCAGTAAAGCATTTACGAATTGCTCTCTGCTCAAGAACTCC
AGTATATGAGGCCCTACTTCCTTTAGTCCAAATGCTGCTGTTTGCGGGTC
ACATTGACGAGGCTGTAAATGTGCTCGAGAAGTTTGGTCATAGTTCACAG
GCAGCACTCGGTCTAAGAGCAAAAGCTAGTCTATTGG
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