CV190140
EST Overview
Libraries
Unigenes
This EST is part of the following unigenes:
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CV190140 vs. Populus trichocarpa peptide v2.0
Match: POPTR_0004s22050.1 () HSP 1 Score: 87.4261 bits (215), Expect = 3.731e-18 Identity = 50/117 (42.74%), Postives = 64/117 (54.70%), Query Frame = 2 Query: 77 RAQDRAPHGLAYSHPMALSPSAVDFFHPSTQDP------CAESNCSPLPIAATVASTLAHESK-SPPEEG--RLXXXXXXXXXXXXXXXXXLAIGVYYEVVKRRANLTRTKPVQPDA 400 RAQDRAPHGL Y P+A SPSAV+FFHP TQ+P A S+CSP P+AA + T + K S + G +L L +GVYY + R+AN+ R QP+A Sbjct: 45 RAQDRAPHGLVYEKPVAFSPSAVEFFHPKTQEPNTENPCAASSSCSPFPLAAQLEDTDQTQGKISTSQRGGNQLGAGGIAGVILGLAFAVLLTMGVYYVTITRKANINRANSDQPNA 161
BLAST of CV190140 vs. Populus trichocarpa peptide v2.0
Match: POPTR_0009s01930.1 () HSP 1 Score: 80.1073 bits (196), Expect = 5.956e-16 Identity = 49/109 (44.95%), Postives = 64/109 (58.72%), Query Frame = 2 Query: 80 AQDRAPHGLAYSHPMALSPSAVDFFHPSTQDP------CAESNCSPLPIAATVAST-LAHESK-SPPEEG--RLXXXXXXXXXXXXXXXXXLAIGVYYEVVKRRANLTR 376 AQ RAPHGL Y +P+A SPSAV+FFHP T +P A S+CSPLP+AA + +T A ES+ S ++G RL L +GVY+ +V R+ANL R Sbjct: 25 AQGRAPHGLVYENPVAFSPSAVEFFHPKTHEPNVKSPCAASSSCSPLPLAAQLEATDQAQESEISTSQKGGNRLRAGGIAGIVLGVAFAVLLTMGVYHVMVTRKANLNR 133
BLAST of CV190140 vs. P. persica 1.0 peptide
Match: ppa024319m () HSP 1 Score: 90.5077 bits (223), Expect = 3.239e-19 Identity = 54/115 (46.96%), Postives = 67/115 (58.26%), Query Frame = 2 Query: 80 AQDRAPHGLAYSHPMALSPSAVDFFHPSTQ-----DPCAESNCSPL-PIAATVASTLAHESK-SPPEEGR--LXXXXXXXXXXXXXXXXXLAIGVYYEVVKRRANLTRTKPVQPD 397 A++RAPHGLA +PMA PSA FFHP+ Q DPC SNCSPL PIAA V +T AHESK S + GR L +A+GVYY +V RR ++ + V+PD Sbjct: 29 AEERAPHGLARENPMAFPPSAYKFFHPTNQNPIAKDPCKASNCSPLMPIAAQVQATKAHESKVSASQNGRTTLGVGGIAGFVFGLAFAAFVAMGVYYVLVSRREDMRKANTVKPD 143
BLAST of CV190140 vs. TrEMBL
Match: B9SWB2|B9SWB2_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0154120 PE=4 SV=1) HSP 1 Score: 97.8265 bits (242), Expect = 3.626e-19 Identity = 58/117 (49.57%), Postives = 68/117 (58.12%), Query Frame = 2 Query: 77 RAQDRAPHGLAYSHPMALSPSAVDFFHPSTQD-----PCAESN-CSPLPIAATVASTLAHESKSPPEE---GRLXXXXXXXXXXXXXXXXXLAIGVYYEVVKRRANLTRTKPVQPDA 400 RAQ+RAPHGLAY +P+A SPSAV+FFHP TQD PCAES+ CSPLP+AA V + A ES P + L LA+G +Y V RRAN R VQPDA Sbjct: 20 RAQERAPHGLAYENPVAFSPSAVEFFHPKTQDPNTKNPCAESSGCSPLPLAAQVEAAQARESLLPTSQKGGSGLGAGGIAGIVIGLAFAVLLAMGGFYIFVTRRANENRANSVQPDA 136
BLAST of CV190140 vs. TrEMBL
Match: B9MZ49|B9MZ49_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_595059 PE=4 SV=1) HSP 1 Score: 87.4261 bits (215), Expect = 4.901e-16 Identity = 50/117 (42.74%), Postives = 64/117 (54.70%), Query Frame = 2 Query: 77 RAQDRAPHGLAYSHPMALSPSAVDFFHPSTQDP------CAESNCSPLPIAATVASTLAHESK-SPPEEG--RLXXXXXXXXXXXXXXXXXLAIGVYYEVVKRRANLTRTKPVQPDA 400 RAQDRAPHGL Y P+A SPSAV+FFHP TQ+P A S+CSP P+AA + T + K S + G +L L +GVYY + R+AN+ R QP+A Sbjct: 22 RAQDRAPHGLVYEKPVAFSPSAVEFFHPKTQEPNTENPCAASSSCSPFPLAAQLEDTDQTQGKISTSQRGGNQLGAGGIAGVILGLAFAVLLTMGVYYVTITRKANINRANSDQPNA 138
BLAST of CV190140 vs. TrEMBL
Match: B9HQ94|B9HQ94_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_558242 PE=4 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 3.177e-15 Identity = 52/117 (44.44%), Postives = 68/117 (58.12%), Query Frame = 2 Query: 80 AQDRAPHGLAYSHPMALSPSAVDFFHPSTQDP------CAESNCSPLPIAATVAST-LAHESK-SPPEEG--RLXXXXXXXXXXXXXXXXXLAIGVYYEVVKRRANLTRTKPVQPDA 400 AQ RAPHGL Y +P+A SPSAV+FFHP T +P A S+CSPLP+AA + +T A ES+ S ++G RL L +GVY+ +V R+ANL R VQ +A Sbjct: 25 AQGRAPHGLVYENPVAFSPSAVEFFHPKTHEPNVKSPCAASSSCSPLPLAAQLEATDQAQESEISTSQKGGNRLRAGGIAGIVLGVAFAVLLTMGVYHVMVTRKANLNRANSVQTNA 141
BLAST of CV190140 vs. TrEMBL
Match: C6T4S8|C6T4S8_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 2.689e-14 Identity = 46/103 (44.66%), Postives = 59/103 (57.28%), Query Frame = 2 Query: 80 AQDRAPHGLAYSHPMALSPSAVDFFHPS-----TQDPCAESNCSPLPIAATVASTLAHESKSPPEEG---RLXXXXXXXXXXXXXXXXXLAIGVYYEVVKRRA 364 AQ+RAPHGL Y +P A SPSA +F HP+ T+DPCA S CSP+P+AA V +T HESK+ +G +L LA+GVY+ V RA Sbjct: 22 AQERAPHGLVYENPEAFSPSAYNFLHPNERKPETKDPCAASKCSPMPLAAQVEATEIHESKASTPQGSKKQLVAGGVAGIIFGVAFVVLLAMGVYHVRVTGRA 124
BLAST of CV190140 vs. TrEMBL
Match: Q9SKM9|Q9SKM9_ARATH (Expressed protein OS=Arabidopsis thaliana GN=At2g28410 PE=2 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 1.631e-11 Identity = 39/63 (61.90%), Postives = 43/63 (68.25%), Query Frame = 2 Query: 80 AQDRAPHGLAYSHPMALSPSAVDFFHPS------TQDPCAESNCSPLPIAATV--ASTLAHES 244 AQDRAPHGLAY P+A SPSA DFFH T +PC+ES CSPLP+AA V AS A ES Sbjct: 22 AQDRAPHGLAYETPVAFSPSAFDFFHTQPENPDPTFNPCSESGCSPLPVAAKVQGASAKAQES 84
BLAST of CV190140 vs. TrEMBL
Match: D7LHM6|D7LHM6_ARALY (Putative uncharacterized protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_901666 PE=4 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 1.631e-11 Identity = 39/63 (61.90%), Postives = 42/63 (66.67%), Query Frame = 2 Query: 80 AQDRAPHGLAYSHPMALSPSAVDFFHPS------TQDPCAESNCSPLPIAATV--ASTLAHES 244 AQDRAPHGLAY P+A SPSA DFFH T +PC ES CSPLP+AA V AS A ES Sbjct: 22 AQDRAPHGLAYETPVAFSPSAFDFFHAKPENPDPTLNPCVESGCSPLPVAAKVQGASAKAQES 84
BLAST of CV190140 vs. TAIR peptide
Match: AT2G28410.1 (| Symbols: | unknown protein; Has 18 Blast hits to 18 proteins in 5 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 18; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | chr2:12156202-12156549 FORWARD LENGTH=115) HSP 1 Score: 72.4034 bits (176), Expect = 1.102e-13 Identity = 39/63 (61.90%), Postives = 43/63 (68.25%), Query Frame = 2 Query: 80 AQDRAPHGLAYSHPMALSPSAVDFFHPS------TQDPCAESNCSPLPIAATV--ASTLAHES 244 AQDRAPHGLAY P+A SPSA DFFH T +PC+ES CSPLP+AA V AS A ES Sbjct: 22 AQDRAPHGLAYETPVAFSPSAFDFFHTQPENPDPTFNPCSESGCSPLPVAAKVQGASAKAQES 84
BLAST of CV190140 vs. TAIR peptide
Match: AT5G60650.1 (| Symbols: | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G28410.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). | chr5:24374305-24374748 REVERSE LENGTH=147) HSP 1 Score: 49.6766 bits (117), Expect = 7.649e-7 Identity = 39/127 (30.71%), Postives = 55/127 (43.31%), Query Frame = 2 Query: 80 AQDRAPHGLAYSHPMALSPSAVDFFHP----STQDPCAESNCSPLPIAATVASTLAHESKSP----------------PEEGRLXXXXXXXXXXXXXXXXXLAIGVYYEVVKRRANLTRTKPVQPDA 400 A R HG AY++P A SP A DFFHP S + +S+ SPL ++ + + T E S EEGR L++G+Y+ + K+RAN+ RT DA Sbjct: 24 AGSRPVHGPAYTNPSAFSPQAYDFFHPKSSLSDHNNPPKSSPSPLSLSPSPSKTSIVEPDSQGSKVSSDEHTTSESRREEEGR---GETIGVVLGLSFIAFLSLGIYFVIKKQRANIIRTIVTHSDA 147 The following BLAST results are available for this feature:
BLAST of CV190140 vs. Populus trichocarpa peptide v2.0
Analysis Date: 2011-01-18 (BLAST: Vaccinium corymbosum unigene v1 vs Populus trichocarpa v2.0 peptide) Total hits: 2
BLAST of CV190140 vs. P. persica 1.0 peptide
Analysis Date: 2011-01-18 (BLAST: Vaccinium corymbosum unigene v1 vs Ppersica v1.0 peptide) Total hits: 1
BLAST of CV190140 vs. TrEMBL
Analysis Date: 2011-01-18 (BLAST: Vaccinium corymbosum unigene v1 vs TrEMBL) Total hits: 6
BLAST of CV190140 vs. TAIR peptide
Analysis Date: 2011-02-10 (BLAST: Vaccinium corymbosum unigene v1 vs TAIR 10 peptide) Total hits: 2
InterPro
Analysis Name: InterProScan analysis for Vaccinium corymbosum unigene v1
Date Performed: 2011-01-18
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CV190140 ID=CV190140; Name=CV190140; organism=Vaccinium corymbosum; type=EST; length=441bpback to top Annotated Terms
The
following terms have been associated with
this EST:
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