CV190140

EST Overview
NameCV190140
Unique NameCV190140
TypeEST
OrganismVaccinium corymbosum (northern highbush blueberry)
Sequence length441
Libraries
Library NameType
LIBEST_016374 Vco01cdna_library
Unigenes
This EST is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Vaccinium corymbosum unigene v1EST
Homology
BLAST of CV190140 vs. Populus trichocarpa peptide v2.0
Match: POPTR_0004s22050.1 ()

HSP 1 Score: 87.4261 bits (215), Expect = 3.731e-18
Identity = 50/117 (42.74%), Postives = 64/117 (54.70%), Query Frame = 2
Query:   77 RAQDRAPHGLAYSHPMALSPSAVDFFHPSTQDP------CAESNCSPLPIAATVASTLAHESK-SPPEEG--RLXXXXXXXXXXXXXXXXXLAIGVYYEVVKRRANLTRTKPVQPDA 400
            RAQDRAPHGL Y  P+A SPSAV+FFHP TQ+P       A S+CSP P+AA +  T   + K S  + G  +L                 L +GVYY  + R+AN+ R    QP+A
Sbjct:   45 RAQDRAPHGLVYEKPVAFSPSAVEFFHPKTQEPNTENPCAASSSCSPFPLAAQLEDTDQTQGKISTSQRGGNQLGAGGIAGVILGLAFAVLLTMGVYYVTITRKANINRANSDQPNA 161          
BLAST of CV190140 vs. Populus trichocarpa peptide v2.0
Match: POPTR_0009s01930.1 ()

HSP 1 Score: 80.1073 bits (196), Expect = 5.956e-16
Identity = 49/109 (44.95%), Postives = 64/109 (58.72%), Query Frame = 2
Query:   80 AQDRAPHGLAYSHPMALSPSAVDFFHPSTQDP------CAESNCSPLPIAATVAST-LAHESK-SPPEEG--RLXXXXXXXXXXXXXXXXXLAIGVYYEVVKRRANLTR 376
            AQ RAPHGL Y +P+A SPSAV+FFHP T +P       A S+CSPLP+AA + +T  A ES+ S  ++G  RL                 L +GVY+ +V R+ANL R
Sbjct:   25 AQGRAPHGLVYENPVAFSPSAVEFFHPKTHEPNVKSPCAASSSCSPLPLAAQLEATDQAQESEISTSQKGGNRLRAGGIAGIVLGVAFAVLLTMGVYHVMVTRKANLNR 133          
BLAST of CV190140 vs. P. persica 1.0 peptide
Match: ppa024319m ()

HSP 1 Score: 90.5077 bits (223), Expect = 3.239e-19
Identity = 54/115 (46.96%), Postives = 67/115 (58.26%), Query Frame = 2
Query:   80 AQDRAPHGLAYSHPMALSPSAVDFFHPSTQ-----DPCAESNCSPL-PIAATVASTLAHESK-SPPEEGR--LXXXXXXXXXXXXXXXXXLAIGVYYEVVKRRANLTRTKPVQPD 397
            A++RAPHGLA  +PMA  PSA  FFHP+ Q     DPC  SNCSPL PIAA V +T AHESK S  + GR  L                 +A+GVYY +V RR ++ +   V+PD
Sbjct:   29 AEERAPHGLARENPMAFPPSAYKFFHPTNQNPIAKDPCKASNCSPLMPIAAQVQATKAHESKVSASQNGRTTLGVGGIAGFVFGLAFAAFVAMGVYYVLVSRREDMRKANTVKPD 143          
BLAST of CV190140 vs. TrEMBL
Match: B9SWB2|B9SWB2_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0154120 PE=4 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 3.626e-19
Identity = 58/117 (49.57%), Postives = 68/117 (58.12%), Query Frame = 2
Query:   77 RAQDRAPHGLAYSHPMALSPSAVDFFHPSTQD-----PCAESN-CSPLPIAATVASTLAHESKSPPEE---GRLXXXXXXXXXXXXXXXXXLAIGVYYEVVKRRANLTRTKPVQPDA 400
            RAQ+RAPHGLAY +P+A SPSAV+FFHP TQD     PCAES+ CSPLP+AA V +  A ES  P  +     L                 LA+G +Y  V RRAN  R   VQPDA
Sbjct:   20 RAQERAPHGLAYENPVAFSPSAVEFFHPKTQDPNTKNPCAESSGCSPLPLAAQVEAAQARESLLPTSQKGGSGLGAGGIAGIVIGLAFAVLLAMGGFYIFVTRRANENRANSVQPDA 136          
BLAST of CV190140 vs. TrEMBL
Match: B9MZ49|B9MZ49_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_595059 PE=4 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 4.901e-16
Identity = 50/117 (42.74%), Postives = 64/117 (54.70%), Query Frame = 2
Query:   77 RAQDRAPHGLAYSHPMALSPSAVDFFHPSTQDP------CAESNCSPLPIAATVASTLAHESK-SPPEEG--RLXXXXXXXXXXXXXXXXXLAIGVYYEVVKRRANLTRTKPVQPDA 400
            RAQDRAPHGL Y  P+A SPSAV+FFHP TQ+P       A S+CSP P+AA +  T   + K S  + G  +L                 L +GVYY  + R+AN+ R    QP+A
Sbjct:   22 RAQDRAPHGLVYEKPVAFSPSAVEFFHPKTQEPNTENPCAASSSCSPFPLAAQLEDTDQTQGKISTSQRGGNQLGAGGIAGVILGLAFAVLLTMGVYYVTITRKANINRANSDQPNA 138          
BLAST of CV190140 vs. TrEMBL
Match: B9HQ94|B9HQ94_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_558242 PE=4 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 3.177e-15
Identity = 52/117 (44.44%), Postives = 68/117 (58.12%), Query Frame = 2
Query:   80 AQDRAPHGLAYSHPMALSPSAVDFFHPSTQDP------CAESNCSPLPIAATVAST-LAHESK-SPPEEG--RLXXXXXXXXXXXXXXXXXLAIGVYYEVVKRRANLTRTKPVQPDA 400
            AQ RAPHGL Y +P+A SPSAV+FFHP T +P       A S+CSPLP+AA + +T  A ES+ S  ++G  RL                 L +GVY+ +V R+ANL R   VQ +A
Sbjct:   25 AQGRAPHGLVYENPVAFSPSAVEFFHPKTHEPNVKSPCAASSSCSPLPLAAQLEATDQAQESEISTSQKGGNRLRAGGIAGIVLGVAFAVLLTMGVYHVMVTRKANLNRANSVQTNA 141          
BLAST of CV190140 vs. TrEMBL
Match: C6T4S8|C6T4S8_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 2.689e-14
Identity = 46/103 (44.66%), Postives = 59/103 (57.28%), Query Frame = 2
Query:   80 AQDRAPHGLAYSHPMALSPSAVDFFHPS-----TQDPCAESNCSPLPIAATVASTLAHESKSPPEEG---RLXXXXXXXXXXXXXXXXXLAIGVYYEVVKRRA 364
            AQ+RAPHGL Y +P A SPSA +F HP+     T+DPCA S CSP+P+AA V +T  HESK+   +G   +L                 LA+GVY+  V  RA
Sbjct:   22 AQERAPHGLVYENPEAFSPSAYNFLHPNERKPETKDPCAASKCSPMPLAAQVEATEIHESKASTPQGSKKQLVAGGVAGIIFGVAFVVLLAMGVYHVRVTGRA 124          
BLAST of CV190140 vs. TrEMBL
Match: Q9SKM9|Q9SKM9_ARATH (Expressed protein OS=Arabidopsis thaliana GN=At2g28410 PE=2 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 1.631e-11
Identity = 39/63 (61.90%), Postives = 43/63 (68.25%), Query Frame = 2
Query:   80 AQDRAPHGLAYSHPMALSPSAVDFFHPS------TQDPCAESNCSPLPIAATV--ASTLAHES 244
            AQDRAPHGLAY  P+A SPSA DFFH        T +PC+ES CSPLP+AA V  AS  A ES
Sbjct:   22 AQDRAPHGLAYETPVAFSPSAFDFFHTQPENPDPTFNPCSESGCSPLPVAAKVQGASAKAQES 84          
BLAST of CV190140 vs. TrEMBL
Match: D7LHM6|D7LHM6_ARALY (Putative uncharacterized protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_901666 PE=4 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 1.631e-11
Identity = 39/63 (61.90%), Postives = 42/63 (66.67%), Query Frame = 2
Query:   80 AQDRAPHGLAYSHPMALSPSAVDFFHPS------TQDPCAESNCSPLPIAATV--ASTLAHES 244
            AQDRAPHGLAY  P+A SPSA DFFH        T +PC ES CSPLP+AA V  AS  A ES
Sbjct:   22 AQDRAPHGLAYETPVAFSPSAFDFFHAKPENPDPTLNPCVESGCSPLPVAAKVQGASAKAQES 84          
BLAST of CV190140 vs. TAIR peptide
Match: AT2G28410.1 (| Symbols: | unknown protein; Has 18 Blast hits to 18 proteins in 5 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 18; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | chr2:12156202-12156549 FORWARD LENGTH=115)

HSP 1 Score: 72.4034 bits (176), Expect = 1.102e-13
Identity = 39/63 (61.90%), Postives = 43/63 (68.25%), Query Frame = 2
Query:   80 AQDRAPHGLAYSHPMALSPSAVDFFHPS------TQDPCAESNCSPLPIAATV--ASTLAHES 244
            AQDRAPHGLAY  P+A SPSA DFFH        T +PC+ES CSPLP+AA V  AS  A ES
Sbjct:   22 AQDRAPHGLAYETPVAFSPSAFDFFHTQPENPDPTFNPCSESGCSPLPVAAKVQGASAKAQES 84          
BLAST of CV190140 vs. TAIR peptide
Match: AT5G60650.1 (| Symbols: | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G28410.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). | chr5:24374305-24374748 REVERSE LENGTH=147)

HSP 1 Score: 49.6766 bits (117), Expect = 7.649e-7
Identity = 39/127 (30.71%), Postives = 55/127 (43.31%), Query Frame = 2
Query:   80 AQDRAPHGLAYSHPMALSPSAVDFFHP----STQDPCAESNCSPLPIAATVASTLAHESKSP----------------PEEGRLXXXXXXXXXXXXXXXXXLAIGVYYEVVKRRANLTRTKPVQPDA 400
            A  R  HG AY++P A SP A DFFHP    S  +   +S+ SPL ++ + + T   E  S                  EEGR                  L++G+Y+ + K+RAN+ RT     DA
Sbjct:   24 AGSRPVHGPAYTNPSAFSPQAYDFFHPKSSLSDHNNPPKSSPSPLSLSPSPSKTSIVEPDSQGSKVSSDEHTTSESRREEEGR---GETIGVVLGLSFIAFLSLGIYFVIKKQRANIIRTIVTHSDA 147          
The following BLAST results are available for this feature:
BLAST of CV190140 vs. Populus trichocarpa peptide v2.0
Analysis Date: 2011-01-18 (BLAST: Vaccinium corymbosum unigene v1 vs Populus trichocarpa v2.0 peptide)
Total hits: 2
Match NameE-valueIdentityDescription
POPTR_0004s22050.13.731e-1842.74[more]
POPTR_0009s01930.15.956e-1644.95[more]
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BLAST of CV190140 vs. P. persica 1.0 peptide
Analysis Date: 2011-01-18 (BLAST: Vaccinium corymbosum unigene v1 vs Ppersica v1.0 peptide)
Total hits: 1
Match NameE-valueIdentityDescription
ppa024319m3.239e-1946.96[more]
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BLAST of CV190140 vs. TrEMBL
Analysis Date: 2011-01-18 (BLAST: Vaccinium corymbosum unigene v1 vs TrEMBL)
Total hits: 6
Match NameE-valueIdentityDescription
B9SWB2|B9SWB2_RICCO3.626e-1949.57Putative uncharacterized protein OS=Ricinus commun... [more]
B9MZ49|B9MZ49_POPTR4.901e-1642.74Predicted protein OS=Populus trichocarpa GN=POPTRD... [more]
B9HQ94|B9HQ94_POPTR3.177e-1544.44Predicted protein OS=Populus trichocarpa GN=POPTRD... [more]
C6T4S8|C6T4S8_SOYBN2.689e-1444.66Putative uncharacterized protein OS=Glycine max PE... [more]
Q9SKM9|Q9SKM9_ARATH1.631e-1161.90Expressed protein OS=Arabidopsis thaliana GN=At2g2... [more]
D7LHM6|D7LHM6_ARALY1.631e-1161.90Putative uncharacterized protein OS=Arabidopsis ly... [more]
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BLAST of CV190140 vs. TAIR peptide
Analysis Date: 2011-02-10 (BLAST: Vaccinium corymbosum unigene v1 vs TAIR 10 peptide)
Total hits: 2
Match NameE-valueIdentityDescription
AT2G28410.11.102e-1361.90| Symbols: | unknown protein; Has 18 Blast hits t... [more]
AT5G60650.17.649e-730.71| Symbols: | unknown protein; FUNCTIONS IN: molec... [more]
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InterPro
Analysis Name: InterProScan analysis for Vaccinium corymbosum unigene v1
Date Performed: 2011-01-18
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSEGsegsegcoord: 14..25
score
NoneNo IPR availableSEGsegsegcoord: 6..19
score: NAcoord: 85..101
score

Properties
Property NameValue
Singlet in analysisVaccinium corymbosum unigene v1
Sequences
The following sequences are available for this feature:

EST sequence

>CV190140 ID=CV190140; Name=CV190140; organism=Vaccinium corymbosum; type=EST; length=441bp
CCAAATTGAGCATTCCTGAAAGTTCCCCATGGCTTCAATCTTGATATTCA
CTCTCCTTTCTTTCCTCACCATCACAAGAGCTCAAGACAGAGCTCCCCAC
GGGCTCGCTTACTCTCACCCCATGGCTCTCTCTCCATCGGCAGTCGACTT
TTTCCACCCCAGTACCCAAGACCCGTGTGCCGAATCAAACTGCTCCCCAC
TGCCTATAGCAGCCACAGTGGCATCAACTCTCGCACACGAGAGCAAATCA
CCGCCAGAAGAGGGGCGGTTGGGAGCTGGTGGAGTCGCTGGCATTGTGTA
TGGTATTGTGTGTGCTGTGGTTTTGGCAATCGGCGTTTACTACGAAGTGG
TGAAGCGTCGAGCCAACTTGACTCGAACTAAACCTGTTCAACCTGATGCT
TGATACAAAGACATATAGGCAGATACAATGTATGCTCACCA
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Annotated Terms
The following terms have been associated with this EST:
Vocabulary: INTERPRO
TermDefinition
noIPRunintegrated