CV190153
EST Overview
Libraries
Unigenes
This EST is part of the following unigenes:
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CV190153 vs. Populus trichocarpa peptide v2.0
Match: POPTR_0008s16350.1 () HSP 1 Score: 78.9518 bits (193), Expect = 2.447e-15 Identity = 44/108 (40.74%), Postives = 62/108 (57.41%), Query Frame = 2 Query: 119 PRADLDRKDSATGKTGLSQRIENVEEARNSSGEDQYYSNGSAKKIRTGGNISLNSMRSDTIEAPIIDLEELVNKVKWLKGILESGVPFPNARRPPWKFVEHHGSSAPE 442 P A L + + ++ R + E A ++ G+D ++ KK+RT G I +S SDTI A I+DLE LVN+VKW+K L+ G+P N R WKF+EH G S E Sbjct: 46 PCARLIKPVNQDSQSSPQVRDVSAEVAEDAGGKDNDDNDTPLKKMRTDGGICSDSTCSDTIGAAILDLEVLVNRVKWMKDALKFGMPLSNTARLSWKFLEHRGPSRHE 153
BLAST of CV190153 vs. P. persica 1.0 peptide
Match: ppa007522m () HSP 1 Score: 109.768 bits (273), Expect = 9.173e-25 Identity = 62/145 (42.76%), Postives = 89/145 (61.38%), Query Frame = 2 Query: 2 ISTNTLPPVDKSKQPIAKEPTRQPLSIIAIPTEEVHRPQPRADLDRKDSATGKTGLSQ-----RIENVEEA--RNSSGEDQYYSNGSAKKIRTGGNISLNSMRSDTIEAPIIDLEELVNKVKWLKGILESGVPFPNARRPPWKFV 415 +S ++L P+D +E +QPL AI + P+ D D DS GKT S I+N + R+++G+D+ +NGS KK++T +I LNSM SDT+E I+DLEELVN+VKW+KG+LE G+P +A RP WKF+ Sbjct: 228 VSASSLQPLDG-----LEEMAKQPLG--AITAKLTPTPETNVDSDMADSGIGKTSCSDSVSSSHIKNASKGMGRSTTGKDRVDNNGSLKKLKTDQSIVLNSMSSDTLEGAILDLEELVNRVKWMKGVLEIGMPLTSAMRPTWKFL 365
BLAST of CV190153 vs. TrEMBL
Match: B9SIS9|B9SIS9_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0540750 PE=4 SV=1) HSP 1 Score: 97.8265 bits (242), Expect = 5.919e-19 Identity = 54/144 (37.50%), Postives = 83/144 (57.64%), Query Frame = 2 Query: 23 PVDKSKQPIAKEPTRQPLSIIAIPTEEVHRPQPRADLDRKDSATGKTGLSQRIENV-------EEARNSSGEDQYYSNGSAKKIRTGGNISLNSMRSDTIEAPIIDLEELVNKVKWLKGILESGVPFPNARRPPWKFVEHHGSS 433 P++ S + +P + + + I E ++ L D KT S I ++ E A +++ +D +++ G +KK+RT +I LNSM DTIEA I+ LEELVN+VKW+K IL+ G+P P++ +P WKFVEH SS Sbjct: 144 PMESSTACMKTQPVKSTAACVDIQAVEKNK-----SLHVTDDGIAKTSCSDSISSLRFGVASAEVAGDTAEKDSHHNRGPSKKMRTDRSIMLNSMSCDTIEAAIVHLEELVNRVKWMKDILKFGMPLPDSVQPSWKFVEHRSSS 282 The following BLAST results are available for this feature:
BLAST of CV190153 vs. Populus trichocarpa peptide v2.0
Analysis Date: 2011-01-18 (BLAST: Vaccinium corymbosum unigene v1 vs Populus trichocarpa v2.0 peptide) Total hits: 1
BLAST of CV190153 vs. P. persica 1.0 peptide
Analysis Date: 2011-01-18 (BLAST: Vaccinium corymbosum unigene v1 vs Ppersica v1.0 peptide) Total hits: 1
BLAST of CV190153 vs. TrEMBL
Analysis Date: 2011-01-18 (BLAST: Vaccinium corymbosum unigene v1 vs TrEMBL) Total hits: 1
InterPro
Analysis Name: InterProScan analysis for Vaccinium corymbosum unigene v1
Date Performed: 2011-01-18
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CV190153 ID=CV190153; Name=CV190153; organism=Vaccinium corymbosum; type=EST; length=592bpback to top Annotated Terms
The
following terms have been associated with
this EST:
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