CV190153

EST Overview
NameCV190153
Unique NameCV190153
TypeEST
OrganismVaccinium corymbosum (northern highbush blueberry)
Sequence length592
Libraries
Library NameType
LIBEST_016374 Vco01cdna_library
Unigenes
This EST is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Vaccinium corymbosum unigene v1EST
Homology
BLAST of CV190153 vs. Populus trichocarpa peptide v2.0
Match: POPTR_0008s16350.1 ()

HSP 1 Score: 78.9518 bits (193), Expect = 2.447e-15
Identity = 44/108 (40.74%), Postives = 62/108 (57.41%), Query Frame = 2
Query:  119 PRADLDRKDSATGKTGLSQRIENVEEARNSSGEDQYYSNGSAKKIRTGGNISLNSMRSDTIEAPIIDLEELVNKVKWLKGILESGVPFPNARRPPWKFVEHHGSSAPE 442
            P A L +  +   ++    R  + E A ++ G+D   ++   KK+RT G I  +S  SDTI A I+DLE LVN+VKW+K  L+ G+P  N  R  WKF+EH G S  E
Sbjct:   46 PCARLIKPVNQDSQSSPQVRDVSAEVAEDAGGKDNDDNDTPLKKMRTDGGICSDSTCSDTIGAAILDLEVLVNRVKWMKDALKFGMPLSNTARLSWKFLEHRGPSRHE 153          
BLAST of CV190153 vs. P. persica 1.0 peptide
Match: ppa007522m ()

HSP 1 Score: 109.768 bits (273), Expect = 9.173e-25
Identity = 62/145 (42.76%), Postives = 89/145 (61.38%), Query Frame = 2
Query:    2 ISTNTLPPVDKSKQPIAKEPTRQPLSIIAIPTEEVHRPQPRADLDRKDSATGKTGLSQ-----RIENVEEA--RNSSGEDQYYSNGSAKKIRTGGNISLNSMRSDTIEAPIIDLEELVNKVKWLKGILESGVPFPNARRPPWKFV 415
            +S ++L P+D       +E  +QPL   AI  +    P+   D D  DS  GKT  S       I+N  +   R+++G+D+  +NGS KK++T  +I LNSM SDT+E  I+DLEELVN+VKW+KG+LE G+P  +A RP WKF+
Sbjct:  228 VSASSLQPLDG-----LEEMAKQPLG--AITAKLTPTPETNVDSDMADSGIGKTSCSDSVSSSHIKNASKGMGRSTTGKDRVDNNGSLKKLKTDQSIVLNSMSSDTLEGAILDLEELVNRVKWMKGVLEIGMPLTSAMRPTWKFL 365          
BLAST of CV190153 vs. TrEMBL
Match: B9SIS9|B9SIS9_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0540750 PE=4 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 5.919e-19
Identity = 54/144 (37.50%), Postives = 83/144 (57.64%), Query Frame = 2
Query:   23 PVDKSKQPIAKEPTRQPLSIIAIPTEEVHRPQPRADLDRKDSATGKTGLSQRIENV-------EEARNSSGEDQYYSNGSAKKIRTGGNISLNSMRSDTIEAPIIDLEELVNKVKWLKGILESGVPFPNARRPPWKFVEHHGSS 433
            P++ S   +  +P +   + + I   E ++      L   D    KT  S  I ++       E A +++ +D +++ G +KK+RT  +I LNSM  DTIEA I+ LEELVN+VKW+K IL+ G+P P++ +P WKFVEH  SS
Sbjct:  144 PMESSTACMKTQPVKSTAACVDIQAVEKNK-----SLHVTDDGIAKTSCSDSISSLRFGVASAEVAGDTAEKDSHHNRGPSKKMRTDRSIMLNSMSCDTIEAAIVHLEELVNRVKWMKDILKFGMPLPDSVQPSWKFVEHRSSS 282          
The following BLAST results are available for this feature:
BLAST of CV190153 vs. Populus trichocarpa peptide v2.0
Analysis Date: 2011-01-18 (BLAST: Vaccinium corymbosum unigene v1 vs Populus trichocarpa v2.0 peptide)
Total hits: 1
Match NameE-valueIdentityDescription
POPTR_0008s16350.12.447e-1540.74[more]
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BLAST of CV190153 vs. P. persica 1.0 peptide
Analysis Date: 2011-01-18 (BLAST: Vaccinium corymbosum unigene v1 vs Ppersica v1.0 peptide)
Total hits: 1
Match NameE-valueIdentityDescription
ppa007522m9.173e-2542.76[more]
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BLAST of CV190153 vs. TrEMBL
Analysis Date: 2011-01-18 (BLAST: Vaccinium corymbosum unigene v1 vs TrEMBL)
Total hits: 1
Match NameE-valueIdentityDescription
B9SIS9|B9SIS9_RICCO5.919e-1937.50Putative uncharacterized protein OS=Ricinus commun... [more]
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InterPro
Analysis Name: InterProScan analysis for Vaccinium corymbosum unigene v1
Date Performed: 2011-01-18
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSEGsegsegcoord: 63..73
score

Properties
Property NameValue
Singlet in analysisVaccinium corymbosum unigene v1
Sequences
The following sequences are available for this feature:

EST sequence

>CV190153 ID=CV190153; Name=CV190153; organism=Vaccinium corymbosum; type=EST; length=592bp
GATATCAACAAATACATTGCCACCTGTGGATAAATCAAAACAACCTATAG
CGAAGGAGCCCACTAGACAACCTTTGAGCATTATTGCTATTCCCACGGAA
GAAGTGCACAGGCCACAACCTAGGGCAGACTTGGACAGGAAGGATAGTGC
TACTGGGAAAACAGGTTTGTCCCAAAGAATTGAAAATGTTGAAGAAGCAC
GGAACTCTTCTGGAGAAGACCAGTACTATTCCAATGGGTCCGCTAAGAAG
ATCAGAACCGGTGGAAATATTTCTTTAAATTCCATGAGATCTGACACAAT
AGAAGCCCCTATTATTGATTTGGAGGAACTTGTTAACAAAGTTAAGTGGC
TCAAGGGCATCTTAGAATCTGGAGTTCCTTTTCCAAATGCTAGGAGGCCT
CCATGGAAATTTGTGGAGCACCATGGATCATCTGCGCCAGAGTGAGTATC
CAGTAAGTGCAAGATTTCTTTTGCTTTTTTGATGTGATTAGGATAAGTAA
TGATATCCACGTGCATAAATATTGATCCAACATATCTTTCTTATATGCTA
ATGAGAAGATGCCATTGCTCTGTTGGTTCTTATTAGCTAATT
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Annotated Terms
The following terms have been associated with this EST:
Vocabulary: INTERPRO
TermDefinition
noIPRunintegrated