CV191262 | GDV

Annotated Terms

EST Overview


Name	CV191262
Unique Name	CV191262
Type	EST
Organism	Vaccinium corymbosum (northern highbush blueberry)
Sequence length	426

Libraries


Library Name	Type
LIBEST_016374 Vco01	cdna_library

Unigenes

This EST is part of the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
	Vaccinium corymbosum unigene v1	EST

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
Vaccinium corymbosum unigene v1	2011-01-18
BLAST: Vaccinium corymbosum unigene v1 vs Populus trichocarpa v2.0 peptide	2011-01-18
BLAST: Vaccinium corymbosum unigene v1 vs TrEMBL	2011-01-18
BLAST: Vaccinium corymbosum unigene v1 vs Vitis vinifera peptide	2011-01-25
InterProScan analysis for Vaccinium corymbosum unigene v1	2011-01-18

Homology

BLAST of CV191262 vs. Populus trichocarpa peptide v2.0
Match: POPTR_0010s22750.7 ()

HSP 1 Score: 41.9726 bits (97), Expect = 1.148e-9
Identity = 23/52 (44.23%), Postives = 33/52 (63.46%), Query Frame = 1

Query:  271 ESRGSHSQRAIPSYRAALS*PRFGLEAASTENGLQSISETQSSKDSRLSTNG 426
            E + S+S+RAIP+ RA ++      EAA+ ENG   +SET SS+ SR   +G
Sbjct:  332 EGQNSYSRRAIPTRRADINSSHLRQEAAAVENGQHFLSETHSSRYSRPLLSG 383

HSP 2 Score: 36.965 bits (84), Expect = 1.148e-9
Identity = 23/66 (34.85%), Postives = 31/66 (46.97%), Query Frame = 3

Query:   51 KTLKAWNFNALPHPDDGTSRNSGTNNGFSHERNQFLTRGSGTEIGGCHRESAPSRNLVPPSQDPHG 248
            +T    N   +P P  G    S  NN  SHE NQ    G+ T+I   + +S  SRN + P +  HG
Sbjct:  260 RTAYEQNQIGVPPPAHGRFHTS-ENNSLSHEMNQHYAGGNPTDIRRYNHDSILSRNPIAPPRHLHG 324

BLAST of CV191262 vs. Populus trichocarpa peptide v2.0
Match: POPTR_0010s22750.6 ()

HSP 1 Score: 41.9726 bits (97), Expect = 1.148e-9
Identity = 23/52 (44.23%), Postives = 33/52 (63.46%), Query Frame = 1

Query:  271 ESRGSHSQRAIPSYRAALS*PRFGLEAASTENGLQSISETQSSKDSRLSTNG 426
            E + S+S+RAIP+ RA ++      EAA+ ENG   +SET SS+ SR   +G
Sbjct:  332 EGQNSYSRRAIPTRRADINSSHLRQEAAAVENGQHFLSETHSSRYSRPLLSG 383

HSP 2 Score: 36.965 bits (84), Expect = 1.148e-9
Identity = 23/66 (34.85%), Postives = 31/66 (46.97%), Query Frame = 3

Query:   51 KTLKAWNFNALPHPDDGTSRNSGTNNGFSHERNQFLTRGSGTEIGGCHRESAPSRNLVPPSQDPHG 248
            +T    N   +P P  G    S  NN  SHE NQ    G+ T+I   + +S  SRN + P +  HG
Sbjct:  260 RTAYEQNQIGVPPPAHGRFHTS-ENNSLSHEMNQHYAGGNPTDIRRYNHDSILSRNPIAPPRHLHG 324

BLAST of CV191262 vs. Populus trichocarpa peptide v2.0
Match: POPTR_0010s22750.5 ()

HSP 1 Score: 41.9726 bits (97), Expect = 1.148e-9
Identity = 23/52 (44.23%), Postives = 33/52 (63.46%), Query Frame = 1

Query:  271 ESRGSHSQRAIPSYRAALS*PRFGLEAASTENGLQSISETQSSKDSRLSTNG 426
            E + S+S+RAIP+ RA ++      EAA+ ENG   +SET SS+ SR   +G
Sbjct:  332 EGQNSYSRRAIPTRRADINSSHLRQEAAAVENGQHFLSETHSSRYSRPLLSG 383

HSP 2 Score: 36.965 bits (84), Expect = 1.148e-9
Identity = 23/66 (34.85%), Postives = 31/66 (46.97%), Query Frame = 3

Query:   51 KTLKAWNFNALPHPDDGTSRNSGTNNGFSHERNQFLTRGSGTEIGGCHRESAPSRNLVPPSQDPHG 248
            +T    N   +P P  G    S  NN  SHE NQ    G+ T+I   + +S  SRN + P +  HG
Sbjct:  260 RTAYEQNQIGVPPPAHGRFHTS-ENNSLSHEMNQHYAGGNPTDIRRYNHDSILSRNPIAPPRHLHG 324

BLAST of CV191262 vs. Populus trichocarpa peptide v2.0
Match: POPTR_0010s22750.4 ()

HSP 1 Score: 41.9726 bits (97), Expect = 1.148e-9
Identity = 23/52 (44.23%), Postives = 33/52 (63.46%), Query Frame = 1

Query:  271 ESRGSHSQRAIPSYRAALS*PRFGLEAASTENGLQSISETQSSKDSRLSTNG 426
            E + S+S+RAIP+ RA ++      EAA+ ENG   +SET SS+ SR   +G
Sbjct:  332 EGQNSYSRRAIPTRRADINSSHLRQEAAAVENGQHFLSETHSSRYSRPLLSG 383

HSP 2 Score: 36.965 bits (84), Expect = 1.148e-9
Identity = 23/66 (34.85%), Postives = 31/66 (46.97%), Query Frame = 3

Query:   51 KTLKAWNFNALPHPDDGTSRNSGTNNGFSHERNQFLTRGSGTEIGGCHRESAPSRNLVPPSQDPHG 248
            +T    N   +P P  G    S  NN  SHE NQ    G+ T+I   + +S  SRN + P +  HG
Sbjct:  260 RTAYEQNQIGVPPPAHGRFHTS-ENNSLSHEMNQHYAGGNPTDIRRYNHDSILSRNPIAPPRHLHG 324

BLAST of CV191262 vs. Populus trichocarpa peptide v2.0
Match: POPTR_0010s22750.3 ()

HSP 1 Score: 41.9726 bits (97), Expect = 1.148e-9
Identity = 23/52 (44.23%), Postives = 33/52 (63.46%), Query Frame = 1

Query:  271 ESRGSHSQRAIPSYRAALS*PRFGLEAASTENGLQSISETQSSKDSRLSTNG 426
            E + S+S+RAIP+ RA ++      EAA+ ENG   +SET SS+ SR   +G
Sbjct:  332 EGQNSYSRRAIPTRRADINSSHLRQEAAAVENGQHFLSETHSSRYSRPLLSG 383

HSP 2 Score: 36.965 bits (84), Expect = 1.148e-9
Identity = 23/66 (34.85%), Postives = 31/66 (46.97%), Query Frame = 3

Query:   51 KTLKAWNFNALPHPDDGTSRNSGTNNGFSHERNQFLTRGSGTEIGGCHRESAPSRNLVPPSQDPHG 248
            +T    N   +P P  G    S  NN  SHE NQ    G+ T+I   + +S  SRN + P +  HG
Sbjct:  260 RTAYEQNQIGVPPPAHGRFHTS-ENNSLSHEMNQHYAGGNPTDIRRYNHDSILSRNPIAPPRHLHG 324

BLAST of CV191262 vs. Populus trichocarpa peptide v2.0
Match: POPTR_0010s22750.2 ()

HSP 1 Score: 41.9726 bits (97), Expect = 1.148e-9
Identity = 23/52 (44.23%), Postives = 33/52 (63.46%), Query Frame = 1

Query:  271 ESRGSHSQRAIPSYRAALS*PRFGLEAASTENGLQSISETQSSKDSRLSTNG 426
            E + S+S+RAIP+ RA ++      EAA+ ENG   +SET SS+ SR   +G
Sbjct:  332 EGQNSYSRRAIPTRRADINSSHLRQEAAAVENGQHFLSETHSSRYSRPLLSG 383

HSP 2 Score: 36.965 bits (84), Expect = 1.148e-9
Identity = 23/66 (34.85%), Postives = 31/66 (46.97%), Query Frame = 3

Query:   51 KTLKAWNFNALPHPDDGTSRNSGTNNGFSHERNQFLTRGSGTEIGGCHRESAPSRNLVPPSQDPHG 248
            +T    N   +P P  G    S  NN  SHE NQ    G+ T+I   + +S  SRN + P +  HG
Sbjct:  260 RTAYEQNQIGVPPPAHGRFHTS-ENNSLSHEMNQHYAGGNPTDIRRYNHDSILSRNPIAPPRHLHG 324

BLAST of CV191262 vs. Populus trichocarpa peptide v2.0
Match: POPTR_0010s22750.1 ()

HSP 1 Score: 41.9726 bits (97), Expect = 1.148e-9
Identity = 23/52 (44.23%), Postives = 33/52 (63.46%), Query Frame = 1

Query:  271 ESRGSHSQRAIPSYRAALS*PRFGLEAASTENGLQSISETQSSKDSRLSTNG 426
            E + S+S+RAIP+ RA ++      EAA+ ENG   +SET SS+ SR   +G
Sbjct:  332 EGQNSYSRRAIPTRRADINSSHLRQEAAAVENGQHFLSETHSSRYSRPLLSG 383

HSP 2 Score: 36.965 bits (84), Expect = 1.148e-9
Identity = 23/66 (34.85%), Postives = 31/66 (46.97%), Query Frame = 3

Query:   51 KTLKAWNFNALPHPDDGTSRNSGTNNGFSHERNQFLTRGSGTEIGGCHRESAPSRNLVPPSQDPHG 248
            +T    N   +P P  G    S  NN  SHE NQ    G+ T+I   + +S  SRN + P +  HG
Sbjct:  260 RTAYEQNQIGVPPPAHGRFHTS-ENNSLSHEMNQHYAGGNPTDIRRYNHDSILSRNPIAPPRHLHG 324

BLAST of CV191262 vs. TrEMBL
Match: D7TMB2|D7TMB2_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_19.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00016299001 PE=4 SV=1)

HSP 1 Score: 51.6026 bits (122), Expect = 2.544e-9
Identity = 29/49 (59.18%), Postives = 33/49 (67.35%), Query Frame = 1

Query:  271 ESRGSHSQRAIPSYRAALS*PRFGLEAASTENGLQSISETQSSKDSRLS 417
            E   S+SQR IPSYR+ LS P  G EAA +ENGLQ  SET SS+  R S
Sbjct:  384 EGHSSYSQRFIPSYRSGLSYPHLGHEAAHSENGLQFPSETFSSRYPRPS 432

HSP 2 Score: 33.4982 bits (75), Expect = 2.544e-9
Identity = 22/57 (38.60%), Postives = 28/57 (49.12%), Query Frame = 3

Query:   78 ALPHPDDGTSRNSGTNNGFSHERNQFLTRGSGTEIGGCHRESAPSRNLVPPSQDPHG 248
            A+P    G   NS TN G SHE ++F+   S  +I G H  S  SR  +   Q  HG
Sbjct:  321 AVPPAGYGRFLNSETN-GLSHETDRFVVGRSTVDISGYHHGSVSSRFPISLPQYLHG 376

BLAST of CV191262 vs. TrEMBL
Match: A5AE61|A5AE61_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_032580 PE=4 SV=1)

HSP 1 Score: 49.2914 bits (116), Expect = 1.188e-8
Identity = 28/49 (57.14%), Postives = 32/49 (65.31%), Query Frame = 1

Query:  271 ESRGSHSQRAIPSYRAALS*PRFGLEAASTENGLQSISETQSSKDSRLS 417
            E   S+SQR IPSYR+ LS P  G  AA +ENGLQ  SET SS+  R S
Sbjct:  602 EGHSSYSQRFIPSYRSGLSYPHLGHXAAHSENGLQFPSETFSSRYPRPS 650

HSP 2 Score: 33.4982 bits (75), Expect = 1.188e-8
Identity = 22/57 (38.60%), Postives = 28/57 (49.12%), Query Frame = 3

Query:   78 ALPHPDDGTSRNSGTNNGFSHERNQFLTRGSGTEIGGCHRESAPSRNLVPPSQDPHG 248
            A+P    G   NS TN G SHE ++F+   S  +I G H  S  SR  +   Q  HG
Sbjct:  539 AVPPAGYGRFLNSETN-GLSHETDRFVVGRSTVDISGYHHGSVSSRFPISLPQYLHG 594

BLAST of CV191262 vs. Vitis vinifera peptide
Match: GSVIVT01016299001 (assembled CDS)

HSP 1 Score: 51.6026 bits (122), Expect = 1.112e-11
Identity = 29/49 (59.18%), Postives = 33/49 (67.35%), Query Frame = 1

Query:  271 ESRGSHSQRAIPSYRAALS*PRFGLEAASTENGLQSISETQSSKDSRLS 417
            E   S+SQR IPSYR+ LS P  G EAA +ENGLQ  SET SS+  R S
Sbjct:  384 EGHSSYSQRFIPSYRSGLSYPHLGHEAAHSENGLQFPSETFSSRYPRPS 432

HSP 2 Score: 33.4982 bits (75), Expect = 1.112e-11
Identity = 22/57 (38.60%), Postives = 28/57 (49.12%), Query Frame = 3

Query:   78 ALPHPDDGTSRNSGTNNGFSHERNQFLTRGSGTEIGGCHRESAPSRNLVPPSQDPHG 248
            A+P    G   NS TN G SHE ++F+   S  +I G H  S  SR  +   Q  HG
Sbjct:  321 AVPPAGYGRFLNSETN-GLSHETDRFVVGRSTVDISGYHHGSVSSRFPISLPQYLHG 376

The following BLAST results are available for this feature:

BLAST of CV191262 vs. Populus trichocarpa peptide v2.0
BLAST of CV191262 vs. TrEMBL
BLAST of CV191262 vs. Vitis vinifera peptide

BLAST of CV191262 vs. Populus trichocarpa peptide v2.0
Analysis Date: 2011-01-18 (BLAST: Vaccinium corymbosum unigene v1 vs Populus trichocarpa v2.0 peptide)
Total hits: 7


Match Name	E-value	Identity	Description
POPTR_0010s22750.7	1.148e-9	44.23		[more]
POPTR_0010s22750.6	1.148e-9	44.23		[more]
POPTR_0010s22750.5	1.148e-9	44.23		[more]
POPTR_0010s22750.4	1.148e-9	44.23		[more]
POPTR_0010s22750.3	1.148e-9	44.23		[more]
POPTR_0010s22750.2	1.148e-9	44.23		[more]
POPTR_0010s22750.1	1.148e-9	44.23		[more]

BLAST of CV191262 vs. TrEMBL
Analysis Date: 2011-01-18 (BLAST: Vaccinium corymbosum unigene v1 vs TrEMBL)
Total hits: 2


Match Name	E-value	Identity	Description
D7TMB2\|D7TMB2_VITVI	2.544e-9	59.18	Whole genome shotgun sequence of line PN40024, sca...	[more]
A5AE61\|A5AE61_VITVI	1.188e-8	57.14	Putative uncharacterized protein OS=Vitis vinifera...	[more]

BLAST of CV191262 vs. Vitis vinifera peptide
Analysis Date: 2011-01-25 (BLAST: Vaccinium corymbosum unigene v1 vs Vitis vinifera peptide)
Total hits: 1


Match Name	E-value	Identity	Description
GSVIVT01016299001	1.112e-11	59.18	assembled CDS	[more]

InterPro

Analysis Name: InterProScan analysis for Vaccinium corymbosum unigene v1
Date Performed: 2011-01-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	SEG	seg	seg	coord: 51..64 score

Properties


Property Name	Value
Singlet in analysis	Vaccinium corymbosum unigene v1

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>CV191262 ID=CV191262; Name=CV191262; organism=Vaccinium corymbosum; type=EST; length=426bp
CTCGTCGATCTACTGCGGAGCCGTTGGACTAACCAATTTAAATTCTGATG
AAAACACTCAAGGCATGGAACTTTAATGCTCTTCCTCATCCTGATGATGG
AACAAGTAGAAATTCAGGTACTAATAATGGCTTCAGCCACGAGAGGAATC
AGTTTCTTACACGAGGAAGTGGCACTGAGATTGGTGGCTGCCACCGTGAA
TCTGCTCCTAGCAGAAATCTTGTGCCGCCTTCTCAGGATCCTCATGGCTC
CGGCTAATTGGGGTGCCACGGAAAGTCGCGGTAGTCATTCGCAAAGAGCA
ATACCTTCATATAGGGCTGCTCTGAGCTAACCTCGGTTTGGACTTGAGGC
AGCTTCTACAGAAAATGGTCTGCAGTCAATCTCAGAAACTCAATCTTCCA
AGGATTCAAGACTGTCTACTAACGGA

Annotated Terms

The following terms have been associated with this EST:

Vocabulary: **INTERPRO**
Term	Definition
noIPR	unintegrated