DW043389 | GDV

EST Overview


Name	DW043389
Unique Name	DW043389
Type	EST
Organism	Vaccinium corymbosum (northern highbush blueberry)
Sequence length	560

Libraries


Library Name	Type
LIBEST_018810 Subtracted cDNA library of Vaccinium corymbosum	cdna_library

Unigenes

This EST is part of the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
	Vaccinium corymbosum unigene v1	EST

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
Vaccinium corymbosum unigene v1	2011-01-18
BLAST: Vaccinium corymbosum unigene v1 vs Ppersica v1.0 peptide	2011-01-18
BLAST: Vaccinium corymbosum unigene v1 vs Swissprot	2011-01-18
BLAST: Vaccinium corymbosum unigene v1 vs Populus trichocarpa v2.0 peptide	2011-01-18
BLAST: Vaccinium corymbosum unigene v1 vs TrEMBL	2011-01-18
BLAST: Vaccinium corymbosum unigene v1 vs Vitis vinifera peptide	2011-01-25
BLAST: Vaccinium corymbosum unigene v1 vs TAIR 10 peptide	2011-02-10
InterProScan analysis for Vaccinium corymbosum unigene v1	2011-01-18

Homology

[Close]

BLAST of DW043389 vs. DB:swissprot:display
Match: DS22_CRAPL (Desiccation stress protein DSP-22, chloroplastic OS=Craterostigma plantagineum GN=DSP-22 PE=2 SV=1)

HSP 1 Score: 45.0542 bits (105), Expect = 9.004e-12
Identity = 19/28 (67.86%), Postives = 24/28 (85.71%), Query Frame = -1

Query:  309 VELCSGQDVFAQISNGGIPWFLLTSGVL 392
            VEL +G+DVF+Q+ NGG+ WFLLTS VL
Sbjct:  117 VELATGRDVFSQVFNGGVMWFLLTSAVL 144

HSP 2 Score: 45.0542 bits (105), Expect = 9.004e-12
Identity = 19/35 (54.29%), Postives = 28/35 (80.00%), Query Frame = -2

Query:  197 ASLIPQFSGVSVESKSKEFFSADAEMWNGRFAYAG 301
            A+LIP + G+S E+K+  F+++DAE+WNGRFA  G
Sbjct:  147 ATLIPIYRGLSPEAKNNGFWNSDAEIWNGRFAMIG 181

[Close]

BLAST of DW043389 vs. Populus trichocarpa peptide v2.0
Match: POPTR_0008s15780.1 ()

HSP 1 Score: 51.2174 bits (121), Expect = 2.358e-18
Identity = 24/35 (68.57%), Postives = 27/35 (77.14%), Query Frame = -2

Query:  197 ASLIPQFSGVSVESKSKEFFSADAEMWNGRFAYAG 301
            ASLIP F GVS ESKS+   ++DAEMWNGRFA  G
Sbjct:  132 ASLIPLFKGVSAESKSEGVMTSDAEMWNGRFAMLG 166

HSP 2 Score: 43.8986 bits (102), Expect = 2.358e-18
Identity = 20/30 (66.67%), Postives = 25/30 (83.33%), Query Frame = -1

Query:  306 AVELCSGQDVFAQISNGGIPWFLLTSGVLS 395
            AVEL  GQD+F+QISNGG+ WF+ TS +LS
Sbjct:  101 AVELSKGQDLFSQISNGGVSWFVGTSILLS 130

HSP 3 Score: 33.8834 bits (76), Expect = 2.358e-18
Identity = 16/20 (80.00%), Postives = 17/20 (85.00%), Query Frame = -3

Query:  397 GPARERINGRLAMIGFGQAI 456
            GPA ERINGRLAMIGF  A+
Sbjct:   81 GPAPERINGRLAMIGFVAAM 100

[Close]

BLAST of DW043389 vs. Populus trichocarpa peptide v2.0
Match: POPTR_0008s15770.1 ()

HSP 1 Score: 50.447 bits (119), Expect = 3.954e-18
Identity = 24/35 (68.57%), Postives = 26/35 (74.29%), Query Frame = -2

Query:  197 ASLIPQFSGVSVESKSKEFFSADAEMWNGRFAYAG 301
            ASLIP F GVS ESKS    ++DAEMWNGRFA  G
Sbjct:  132 ASLIPLFKGVSAESKSDGVMTSDAEMWNGRFAMLG 166

HSP 2 Score: 43.8986 bits (102), Expect = 3.954e-18
Identity = 20/30 (66.67%), Postives = 25/30 (83.33%), Query Frame = -1

Query:  306 AVELCSGQDVFAQISNGGIPWFLLTSGVLS 395
            AVEL  GQD+F+QISNGG+ WF+ TS +LS
Sbjct:  101 AVELSKGQDLFSQISNGGVSWFVGTSILLS 130

HSP 3 Score: 33.8834 bits (76), Expect = 3.954e-18
Identity = 16/20 (80.00%), Postives = 17/20 (85.00%), Query Frame = -3

Query:  397 GPARERINGRLAMIGFGQAI 456
            GPA ERINGRLAMIGF  A+
Sbjct:   81 GPAPERINGRLAMIGFVAAM 100

[Close]

BLAST of DW043389 vs. Populus trichocarpa peptide v2.0
Match: POPTR_0008s15800.3 ()

HSP 1 Score: 50.0618 bits (118), Expect = 1.700e-16
Identity = 23/35 (65.71%), Postives = 26/35 (74.29%), Query Frame = -2

Query:  197 ASLIPQFSGVSVESKSKEFFSADAEMWNGRFAYAG 301
            ASL+P F GVS ESKS    ++DAEMWNGRFA  G
Sbjct:   40 ASLVPLFKGVSAESKSDGVMTSDAEMWNGRFAMLG 74

HSP 2 Score: 43.8986 bits (102), Expect = 1.700e-16
Identity = 20/30 (66.67%), Postives = 25/30 (83.33%), Query Frame = -1

Query:  306 AVELCSGQDVFAQISNGGIPWFLLTSGVLS 395
            AVEL  GQD+F+QISNGG+ WF+ TS +LS
Sbjct:    9 AVELSKGQDLFSQISNGGVSWFVGTSILLS 38

HSP 3 Score: 28.8758 bits (63), Expect = 1.700e-16
Identity = 14/17 (82.35%), Postives = 14/17 (82.35%), Query Frame = -3

Query:  166 GDLHMLGLVALAFTEFV 216
            G   MLGLVALAFTEFV
Sbjct:   68 GRFAMLGLVALAFTEFV 84

[Close]

BLAST of DW043389 vs. Populus trichocarpa peptide v2.0
Match: POPTR_0008s15800.2 ()

HSP 1 Score: 50.0618 bits (118), Expect = 1.700e-16
Identity = 23/35 (65.71%), Postives = 26/35 (74.29%), Query Frame = -2

Query:  197 ASLIPQFSGVSVESKSKEFFSADAEMWNGRFAYAG 301
            ASL+P F GVS ESKS    ++DAEMWNGRFA  G
Sbjct:   40 ASLVPLFKGVSAESKSDGVMTSDAEMWNGRFAMLG 74

HSP 2 Score: 43.8986 bits (102), Expect = 1.700e-16
Identity = 20/30 (66.67%), Postives = 25/30 (83.33%), Query Frame = -1

Query:  306 AVELCSGQDVFAQISNGGIPWFLLTSGVLS 395
            AVEL  GQD+F+QISNGG+ WF+ TS +LS
Sbjct:    9 AVELSKGQDLFSQISNGGVSWFVGTSILLS 38

HSP 3 Score: 28.8758 bits (63), Expect = 1.700e-16
Identity = 14/17 (82.35%), Postives = 14/17 (82.35%), Query Frame = -3

Query:  166 GDLHMLGLVALAFTEFV 216
            G   MLGLVALAFTEFV
Sbjct:   68 GRFAMLGLVALAFTEFV 84

[Close]

BLAST of DW043389 vs. Populus trichocarpa peptide v2.0
Match: POPTR_0008s15800.1 ()

HSP 1 Score: 50.0618 bits (118), Expect = 7.992e-14
Identity = 23/35 (65.71%), Postives = 26/35 (74.29%), Query Frame = -2

Query:  197 ASLIPQFSGVSVESKSKEFFSADAEMWNGRFAYAG 301
            ASL+P F GVS ESKS    ++DAEMWNGRFA  G
Sbjct:  132 ASLVPLFKGVSAESKSDGVMTSDAEMWNGRFAMLG 166

HSP 2 Score: 43.8986 bits (102), Expect = 7.992e-14
Identity = 20/30 (66.67%), Postives = 25/30 (83.33%), Query Frame = -1

Query:  306 AVELCSGQDVFAQISNGGIPWFLLTSGVLS 395
            AVEL  GQD+F+QISNGG+ WF+ TS +LS
Sbjct:  101 AVELSKGQDLFSQISNGGVSWFVGTSILLS 130

[Close]

BLAST of DW043389 vs. Populus trichocarpa peptide v2.0
Match: POPTR_0008s15760.1 ()

HSP 1 Score: 50.447 bits (119), Expect = 1.089e-12
Identity = 24/35 (68.57%), Postives = 26/35 (74.29%), Query Frame = -2

Query:  197 ASLIPQFSGVSVESKSKEFFSADAEMWNGRFAYAG 301
            ASLIP F GVS ESKS    ++DAEMWNGRFA  G
Sbjct:  132 ASLIPLFKGVSAESKSDGVMTSDAEMWNGRFAMLG 166

HSP 2 Score: 39.6614 bits (91), Expect = 1.089e-12
Identity = 19/30 (63.33%), Postives = 23/30 (76.67%), Query Frame = -1

Query:  306 AVELCSGQDVFAQISNGGIPWFLLTSGVLS 395
            AVEL  GQD+  QISNGG+ WF+ TS +LS
Sbjct:  101 AVELSKGQDLSYQISNGGVSWFVGTSILLS 130

[Close]

BLAST of DW043389 vs. Populus trichocarpa peptide v2.0
Match: POPTR_2515s00200.1 ()

HSP 1 Score: 51.2174 bits (121), Expect = 6.641e-11
Identity = 24/35 (68.57%), Postives = 27/35 (77.14%), Query Frame = -2

Query:  197 ASLIPQFSGVSVESKSKEFFSADAEMWNGRFAYAG 301
            ASLIP F GVS ESKS+   ++DAEMWNGRFA  G
Sbjct:   18 ASLIPLFKGVSAESKSEGVMTSDAEMWNGRFAMLG 52

HSP 2 Score: 26.5646 bits (57), Expect = 6.641e-11
Identity = 12/17 (70.59%), Postives = 14/17 (82.35%), Query Frame = -3

Query:  166 GDLHMLGLVALAFTEFV 216
            G   MLGLVALA+TE+V
Sbjct:   46 GRFAMLGLVALAYTEYV 62

HSP 3 Score: 25.7942 bits (55), Expect = 6.641e-11
Identity = 11/16 (68.75%), Postives = 13/16 (81.25%), Query Frame = -1

Query:  306 SNGGIPWFLLTSGVLS 353
            SNGG+ WFL TS +LS
Sbjct:    1 SNGGVSWFLGTSILLS 16

[Close]

BLAST of DW043389 vs. P. persica 1.0 peptide
Match: ppa026587m ()

HSP 1 Score: 44.2838 bits (103), Expect = 8.072e-12
Identity = 21/35 (60.00%), Postives = 26/35 (74.29%), Query Frame = -2

Query:  197 ASLIPQFSGVSVESKSKEFFSADAEMWNGRFAYAG 301
            ASL+P F GVSVESKS+   ++DAE+ NGR A  G
Sbjct:  139 ASLVPLFKGVSVESKSEGIMTSDAELLNGRLAMLG 173

HSP 2 Score: 42.3578 bits (98), Expect = 8.072e-12
Identity = 21/30 (70.00%), Postives = 25/30 (83.33%), Query Frame = -1

Query:  306 AVELCSGQDVFAQISNGGIPWFLLTSGVLS 395
            AVEL +GQDVFAQISNGG+  F+ TS +LS
Sbjct:  108 AVELYNGQDVFAQISNGGVSLFVATSILLS 137

[Close]

BLAST of DW043389 vs. P. persica 1.0 peptide
Match: ppa011907m ()

HSP 1 Score: 43.5134 bits (101), Expect = 1.047e-11
Identity = 21/35 (60.00%), Postives = 25/35 (71.43%), Query Frame = -2

Query:  197 ASLIPQFSGVSVESKSKEFFSADAEMWNGRFAYAG 301
            ASL+P F GVSVESKS    ++DAE+ NGR A  G
Sbjct:  141 ASLVPLFKGVSVESKSDGIMTSDAELLNGRLAMLG 175

HSP 2 Score: 42.743 bits (99), Expect = 1.047e-11
Identity = 21/30 (70.00%), Postives = 25/30 (83.33%), Query Frame = -1

Query:  306 AVELCSGQDVFAQISNGGIPWFLLTSGVLS 395
            AVEL +GQDVFAQISNGG+  F+ TS +LS
Sbjct:  110 AVELSNGQDVFAQISNGGVSLFVATSILLS 139

[Close]

BLAST of DW043389 vs. P. persica 1.0 peptide
Match: ppa011747m ()

HSP 1 Score: 50.8322 bits (120), Expect = 4.581e-7
Identity = 44/121 (36.36%), Postives = 54/121 (44.63%), Query Frame = -2

Query:  197 SKKPSPGPTRCGPPKRGLKGSSHPNFLXTVSGFRRASTGENQRQTRHDRLRAGNRPWNYAVVRMCLLRYPTAGSHGFC*LPVCYPRASLIPQFSGVSVESKSKEFFSADAEMWNGRFAYAG 559
            SK P P PT   PPKR  K S+  + +   SG   A    N R      + A       A  +    +    G   F    +    ASLIP F GVSVESKS    ++DAE+WNGR A  G
Sbjct:   66 SKIPPPPPTPTPPPKRSPKISTKFSDVFAFSG--PAPERINGRLAMVGFVSA--LAVELAKGQDLFAQISDGGVSLFLGTSILLSVASLIPLFRGVSVESKSDGIMTSDAELWNGRLAMLG 182

[Close]

BLAST of DW043389 vs. TrEMBL
Match: C6SZ42|C6SZ42_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1)

HSP 1 Score: 64.6994 bits (156), Expect = 1.357e-21
Identity = 29/42 (69.05%), Postives = 33/42 (78.57%), Query Frame = -2

Query:  176 ASLIPQFSGVSVESKSKEFFSADAEMWNGRFAYAGFSCIGLH 301
            ASLIP F G+SVESKSK F S+DAE+WNGRFA  GF C G +
Sbjct:  141 ASLIPLFQGISVESKSKGFMSSDAELWNGRFAMLGFGCSGFY 182

HSP 2 Score: 45.8246 bits (107), Expect = 1.357e-21
Identity = 22/30 (73.33%), Postives = 24/30 (80.00%), Query Frame = -1

Query:  306 AVELCSGQDVFAQISNGGIPWFLLTSGVLS 395
            AVE+  GQ VF QISNGGIPWFL TS VL+
Sbjct:  110 AVEVAKGQGVFEQISNGGIPWFLGTSVVLT 139

HSP 3 Score: 36.5798 bits (83), Expect = 1.357e-21
Identity = 23/49 (46.94%), Postives = 28/49 (57.14%), Query Frame = -3

Query:  409 PPAPRVAAPRKGG*RGPATRISXQRFPDS---GGPARERINGRLAMIGF 546
            P  P  A P+      P+ ++S  +F D     GPA ERINGRLAMIGF
Sbjct:   58 PVTPPPAEPKPQPVSTPSPKVST-KFSDVLAFSGPAPERINGRLAMIGF 105

[Close]

BLAST of DW043389 vs. TrEMBL
Match: B2BJD5|B2BJD5_RHOCT (Early light-induced protein 6 OS=Rhododendron catawbiense PE=2 SV=1)

HSP 1 Score: 57.7658 bits (138), Expect = 8.278e-18
Identity = 28/41 (68.29%), Postives = 32/41 (78.05%), Query Frame = -2

Query:  179 ASLIPQFSGVSVESKSKEFFSADAEMWNGRFAYAGFSCIGL 301
            ASLIP  +GVSVESKSK F+S+DAEMWNGRFA  G   + L
Sbjct:  131 ASLIPLSNGVSVESKSKPFWSSDAEMWNGRFAMLGLVALAL 171

HSP 2 Score: 56.6102 bits (135), Expect = 8.278e-18
Identity = 26/30 (86.67%), Postives = 28/30 (93.33%), Query Frame = -1

Query:  306 AVELCSGQDVFAQISNGGIPWFLLTSGVLS 395
            AVEL  G+DVFAQISNGGIPWFLLT+GVLS
Sbjct:  100 AVELSKGEDVFAQISNGGIPWFLLTTGVLS 129

[Close]

BLAST of DW043389 vs. TrEMBL
Match: B2BJD6|B2BJD6_RHOCT (Early light-induced protein 7 OS=Rhododendron catawbiense PE=2 SV=1)

HSP 1 Score: 58.151 bits (139), Expect = 3.069e-17
Identity = 27/35 (77.14%), Postives = 31/35 (88.57%), Query Frame = -2

Query:  197 ASLIPQFSGVSVESKSKEFFSADAEMWNGRFAYAG 301
            ASLIP FSGV+VESKS+ F+S+DAEMWNGRFA  G
Sbjct:  143 ASLIPLFSGVTVESKSRPFWSSDAEMWNGRFAMLG 177

HSP 2 Score: 54.299 bits (129), Expect = 3.069e-17
Identity = 24/30 (80.00%), Postives = 28/30 (93.33%), Query Frame = -1

Query:  306 AVELCSGQDVFAQISNGGIPWFLLTSGVLS 395
            AVEL  G+DVFAQI+NGGIPWF+LT+GVLS
Sbjct:  112 AVELSKGEDVFAQIANGGIPWFVLTTGVLS 141

[Close]

BLAST of DW043389 vs. TrEMBL
Match: B2BJD2|B2BJD2_RHOCT (Early light-induced protein 3 OS=Rhododendron catawbiense PE=2 SV=1)

HSP 1 Score: 56.6102 bits (135), Expect = 2.517e-16
Identity = 26/30 (86.67%), Postives = 28/30 (93.33%), Query Frame = -1

Query:  306 AVELCSGQDVFAQISNGGIPWFLLTSGVLS 395
            AVEL  G+DVFAQISNGGIPWFLLT+GVLS
Sbjct:  100 AVELSKGEDVFAQISNGGIPWFLLTTGVLS 129

HSP 2 Score: 52.7582 bits (125), Expect = 2.517e-16
Identity = 27/41 (65.85%), Postives = 31/41 (75.61%), Query Frame = -2

Query:  179 ASLIPQFSGVSVESKSKEFFSADAEMWNGRFAYAGFSCIGL 301
            ASLIP  SGVSVES+SK F+S+DAEM NGRFA  G   + L
Sbjct:  131 ASLIPLSSGVSVESRSKPFWSSDAEMLNGRFAMLGLVALAL 171

[Close]

BLAST of DW043389 vs. TrEMBL
Match: B2BJD4|B2BJD4_RHOCT (Early light-induced protein 5 OS=Rhododendron catawbiense PE=2 SV=1)

HSP 1 Score: 56.6102 bits (135), Expect = 2.520e-16
Identity = 26/30 (86.67%), Postives = 28/30 (93.33%), Query Frame = -1

Query:  306 AVELCSGQDVFAQISNGGIPWFLLTSGVLS 395
            AVEL  G+DVFAQISNGGIPWFLLT+GVLS
Sbjct:   95 AVELSKGEDVFAQISNGGIPWFLLTTGVLS 124

HSP 2 Score: 52.7582 bits (125), Expect = 2.520e-16
Identity = 27/41 (65.85%), Postives = 31/41 (75.61%), Query Frame = -2

Query:  179 ASLIPQFSGVSVESKSKEFFSADAEMWNGRFAYAGFSCIGL 301
            ASLIP  +GVSVESKSK F+S+DAEM NGRFA  G   + L
Sbjct:  126 ASLIPLSNGVSVESKSKPFWSSDAEMLNGRFAMLGLVALAL 166

[Close]

BLAST of DW043389 vs. TrEMBL
Match: B2BJD3|B2BJD3_RHOCT (Early light-induced protein 4 OS=Rhododendron catawbiense PE=2 SV=1)

HSP 1 Score: 56.6102 bits (135), Expect = 2.533e-16
Identity = 26/30 (86.67%), Postives = 28/30 (93.33%), Query Frame = -1

Query:  306 AVELCSGQDVFAQISNGGIPWFLLTSGVLS 395
            AVEL  G+DVFAQISNGGIPWFLLT+GVLS
Sbjct:   83 AVELSKGEDVFAQISNGGIPWFLLTTGVLS 112

HSP 2 Score: 52.7582 bits (125), Expect = 2.533e-16
Identity = 27/41 (65.85%), Postives = 31/41 (75.61%), Query Frame = -2

Query:  179 ASLIPQFSGVSVESKSKEFFSADAEMWNGRFAYAGFSCIGL 301
            ASLIP  SGVSVES+SK F+S+DAEM NGRFA  G   + L
Sbjct:  114 ASLIPLSSGVSVESRSKPFWSSDAEMLNGRFAMLGLVALAL 154

[Close]

BLAST of DW043389 vs. TrEMBL
Match: A9PEN5|A9PEN5_POPTR (Putative uncharacterized protein OS=Populus trichocarpa PE=2 SV=1)

HSP 1 Score: 51.2174 bits (121), Expect = 2.673e-16
Identity = 24/35 (68.57%), Postives = 27/35 (77.14%), Query Frame = -2

Query:  197 ASLIPQFSGVSVESKSKEFFSADAEMWNGRFAYAG 301
            ASLIP F GVS ESKS+   ++DAEMWNGRFA  G
Sbjct:  132 ASLIPLFKGVSAESKSEGVMTSDAEMWNGRFAMLG 166

HSP 2 Score: 43.8986 bits (102), Expect = 2.673e-16
Identity = 20/30 (66.67%), Postives = 25/30 (83.33%), Query Frame = -1

Query:  306 AVELCSGQDVFAQISNGGIPWFLLTSGVLS 395
            AVEL  GQD+F+QISNGG+ WF+ TS +LS
Sbjct:  101 AVELSKGQDLFSQISNGGVSWFVGTSILLS 130

HSP 3 Score: 33.8834 bits (76), Expect = 2.673e-16
Identity = 16/20 (80.00%), Postives = 17/20 (85.00%), Query Frame = -3

Query:  397 GPARERINGRLAMIGFGQAI 456
            GPA ERINGRLAMIGF  A+
Sbjct:   81 GPAPERINGRLAMIGFVAAM 100

[Close]

BLAST of DW043389 vs. TrEMBL
Match: B2BJD1|B2BJD1_RHOCT (Early light-induced protein 2 OS=Rhododendron catawbiense PE=2 SV=1)

HSP 1 Score: 56.225 bits (134), Expect = 3.272e-16
Identity = 26/30 (86.67%), Postives = 28/30 (93.33%), Query Frame = -1

Query:  306 AVELCSGQDVFAQISNGGIPWFLLTSGVLS 395
            AVEL  G+DVFAQISNGGIPWFLLT+GVLS
Sbjct:  100 AVELYKGEDVFAQISNGGIPWFLLTTGVLS 129

HSP 2 Score: 52.7582 bits (125), Expect = 3.272e-16
Identity = 27/41 (65.85%), Postives = 31/41 (75.61%), Query Frame = -2

Query:  179 ASLIPQFSGVSVESKSKEFFSADAEMWNGRFAYAGFSCIGL 301
            ASLIP  SGVSVES+SK F+S+DAEM NGRFA  G   + L
Sbjct:  131 ASLIPLSSGVSVESRSKPFWSSDAEMLNGRFAMLGLVALAL 171

[Close]

BLAST of DW043389 vs. TrEMBL
Match: B2BJD0|B2BJD0_RHOCT (Early light-induced protein 1 OS=Rhododendron catawbiense PE=2 SV=1)

HSP 1 Score: 56.225 bits (134), Expect = 3.272e-16
Identity = 26/30 (86.67%), Postives = 28/30 (93.33%), Query Frame = -1

Query:  306 AVELCSGQDVFAQISNGGIPWFLLTSGVLS 395
            AVEL  G+DVFAQISNGGIPWFLLT+GVLS
Sbjct:  100 AVELYKGEDVFAQISNGGIPWFLLTTGVLS 129

HSP 2 Score: 52.7582 bits (125), Expect = 3.272e-16
Identity = 27/41 (65.85%), Postives = 31/41 (75.61%), Query Frame = -2

Query:  179 ASLIPQFSGVSVESKSKEFFSADAEMWNGRFAYAGFSCIGL 301
            ASLIP  SGVSVES+SK F+S+DAEM NGRFA  G   + L
Sbjct:  131 ASLIPLSSGVSVESRSKPFWSSDAEMLNGRFAMLGLVALAL 171

[Close]

BLAST of DW043389 vs. TrEMBL
Match: B9HKA9|B9HKA9_POPTR (Early light-inducible protein OS=Populus trichocarpa GN=Elip3 PE=4 SV=1)

HSP 1 Score: 50.447 bits (119), Expect = 4.484e-16
Identity = 24/35 (68.57%), Postives = 26/35 (74.29%), Query Frame = -2

Query:  197 ASLIPQFSGVSVESKSKEFFSADAEMWNGRFAYAG 301
            ASLIP F GVS ESKS    ++DAEMWNGRFA  G
Sbjct:  132 ASLIPLFKGVSAESKSDGVMTSDAEMWNGRFAMLG 166

HSP 2 Score: 43.8986 bits (102), Expect = 4.484e-16
Identity = 20/30 (66.67%), Postives = 25/30 (83.33%), Query Frame = -1

Query:  306 AVELCSGQDVFAQISNGGIPWFLLTSGVLS 395
            AVEL  GQD+F+QISNGG+ WF+ TS +LS
Sbjct:  101 AVELSKGQDLFSQISNGGVSWFVGTSILLS 130

HSP 3 Score: 33.8834 bits (76), Expect = 4.484e-16
Identity = 16/20 (80.00%), Postives = 17/20 (85.00%), Query Frame = -3

Query:  397 GPARERINGRLAMIGFGQAI 456
            GPA ERINGRLAMIGF  A+
Sbjct:   81 GPAPERINGRLAMIGFVAAM 100

[Close]

BLAST of DW043389 vs. Vitis vinifera peptide
Match: GSVIVT01018044001 (assembled CDS)

HSP 1 Score: 54.6842 bits (130), Expect = 5.674e-16
Identity = 26/35 (74.29%), Postives = 28/35 (80.00%), Query Frame = -2

Query:  197 ASLIPQFSGVSVESKSKEFFSADAEMWNGRFAYAG 301
            ASLIP F GVSVESKSK   ++DAEMWNGRFA  G
Sbjct:  135 ASLIPLFKGVSVESKSKGLMTSDAEMWNGRFAMLG 169

HSP 2 Score: 45.8246 bits (107), Expect = 5.674e-16
Identity = 21/28 (75.00%), Postives = 24/28 (85.71%), Query Frame = -1

Query:  306 ELCSGQDVFAQISNGGIPWFLLTSGVLS 389
            E+  G+DVFAQISNGGIPWFL T+ VLS
Sbjct:  106 EIWKGEDVFAQISNGGIPWFLGTAVVLS 133

[Close]

BLAST of DW043389 vs. TAIR peptide
Match: AT3G22840.1 (| Symbols: ELIP1, ELIP | Chlorophyll A-B binding family protein | chr3:8084628-8085445 REVERSE LENGTH=195)

HSP 1 Score: 52.7582 bits (125), Expect = 1.538e-13
Identity = 23/35 (65.71%), Postives = 28/35 (80.00%), Query Frame = -2

Query:  197 ASLIPQFSGVSVESKSKEFFSADAEMWNGRFAYAG 301
            ASL+P F G+SVESKSK   ++DAE+WNGRFA  G
Sbjct:  145 ASLVPLFKGISVESKSKGIMTSDAELWNGRFAMLG 179

HSP 2 Score: 40.0466 bits (92), Expect = 1.538e-13
Identity = 17/30 (56.67%), Postives = 24/30 (80.00%), Query Frame = -1

Query:  306 AVELCSGQDVFAQISNGGIPWFLLTSGVLS 395
            AVEL  G++V AQIS+GG+ WFL T+ +L+
Sbjct:  114 AVELSKGENVLAQISDGGVSWFLGTTAILT 143

[Close]

BLAST of DW043389 vs. TAIR peptide
Match: AT4G14690.1 (| Symbols: ELIP2 | Chlorophyll A-B binding family protein | chr4:8418373-8419129 FORWARD LENGTH=193)

HSP 1 Score: 49.6766 bits (117), Expect = 1.243e-12
Identity = 20/35 (57.14%), Postives = 27/35 (77.14%), Query Frame = -2

Query:  197 ASLIPQFSGVSVESKSKEFFSADAEMWNGRFAYAG 301
            AS++P F G+  E+KSK F ++DAE+WNGRFA  G
Sbjct:  143 ASMVPLFKGIRAEAKSKGFMTSDAELWNGRFAMLG 177

HSP 2 Score: 40.0466 bits (92), Expect = 1.243e-12
Identity = 17/30 (56.67%), Postives = 25/30 (83.33%), Query Frame = -1

Query:  306 AVELCSGQDVFAQISNGGIPWFLLTSGVLS 395
            A+EL  G++VFAQIS+GG+ WFL T+ +L+
Sbjct:  112 AMELSKGENVFAQISDGGVGWFLGTTALLT 141

The following BLAST results are available for this feature:

BLAST of DW043389 vs. DB:swissprot:display
BLAST of DW043389 vs. Populus trichocarpa peptide v2.0
BLAST of DW043389 vs. P. persica 1.0 peptide
BLAST of DW043389 vs. TrEMBL
BLAST of DW043389 vs. Vitis vinifera peptide
BLAST of DW043389 vs. TAIR peptide

BLAST of DW043389 vs. DB:swissprot:display
Analysis Date: 2011-01-18 (BLAST: Vaccinium corymbosum unigene v1 vs Swissprot)
Total hits: 1


Match Name	E-value	Identity	Description
DS22_CRAPL	9.004e-12	67.86	Desiccation stress protein DSP-22, chloroplastic O...	[more]

BLAST of DW043389 vs. Populus trichocarpa peptide v2.0
Analysis Date: 2011-01-18 (BLAST: Vaccinium corymbosum unigene v1 vs Populus trichocarpa v2.0 peptide)
Total hits: 7


Match Name	E-value	Identity
POPTR_0008s15780.1	2.358e-18	68.57	[more]
POPTR_0008s15770.1	3.954e-18	68.57	[more]
POPTR_0008s15800.3	1.700e-16	65.71	[more]
POPTR_0008s15800.2	1.700e-16	65.71	[more]
POPTR_0008s15800.1	7.992e-14	65.71	[more]
POPTR_0008s15760.1	1.089e-12	68.57	[more]
POPTR_2515s00200.1	6.641e-11	68.57	[more]

BLAST of DW043389 vs. P. persica 1.0 peptide
Analysis Date: 2011-01-18 (BLAST: Vaccinium corymbosum unigene v1 vs Ppersica v1.0 peptide)
Total hits: 3


Match Name	E-value	Identity
ppa026587m	8.072e-12	60.00	[more]
ppa011907m	1.047e-11	60.00	[more]
ppa011747m	4.581e-7	36.36	[more]

BLAST of DW043389 vs. TrEMBL
Analysis Date: 2011-01-18 (BLAST: Vaccinium corymbosum unigene v1 vs TrEMBL)
Total hits: 10


Match Name	E-value	Identity	Description
C6SZ42\|C6SZ42_SOYBN	1.357e-21	69.05	Putative uncharacterized protein OS=Glycine max PE...	[more]
B2BJD5\|B2BJD5_RHOCT	8.278e-18	68.29	Early light-induced protein 6 OS=Rhododendron cata...	[more]
B2BJD6\|B2BJD6_RHOCT	3.069e-17	77.14	Early light-induced protein 7 OS=Rhododendron cata...	[more]
B2BJD2\|B2BJD2_RHOCT	2.517e-16	86.67	Early light-induced protein 3 OS=Rhododendron cata...	[more]
B2BJD4\|B2BJD4_RHOCT	2.520e-16	86.67	Early light-induced protein 5 OS=Rhododendron cata...	[more]
B2BJD3\|B2BJD3_RHOCT	2.533e-16	86.67	Early light-induced protein 4 OS=Rhododendron cata...	[more]
A9PEN5\|A9PEN5_POPTR	2.673e-16	68.57	Putative uncharacterized protein OS=Populus tricho...	[more]
B2BJD1\|B2BJD1_RHOCT	3.272e-16	86.67	Early light-induced protein 2 OS=Rhododendron cata...	[more]
B2BJD0\|B2BJD0_RHOCT	3.272e-16	86.67	Early light-induced protein 1 OS=Rhododendron cata...	[more]
B9HKA9\|B9HKA9_POPTR	4.484e-16	68.57	Early light-inducible protein OS=Populus trichocar...	[more]

BLAST of DW043389 vs. Vitis vinifera peptide
Analysis Date: 2011-01-25 (BLAST: Vaccinium corymbosum unigene v1 vs Vitis vinifera peptide)
Total hits: 1


Match Name	E-value	Identity	Description
GSVIVT01018044001	5.674e-16	74.29	assembled CDS	[more]

BLAST of DW043389 vs. TAIR peptide
Analysis Date: 2011-02-10 (BLAST: Vaccinium corymbosum unigene v1 vs TAIR 10 peptide)
Total hits: 2


Match Name	E-value	Identity	Description
AT3G22840.1	1.538e-13	65.71	\| Symbols: ELIP1, ELIP \| Chlorophyll A-B binding f...	[more]
AT4G14690.1	1.243e-12	57.14	\| Symbols: ELIP2 \| Chlorophyll A-B binding family ...	[more]

InterPro

Analysis Name: InterProScan analysis for Vaccinium corymbosum unigene v1
Date Performed: 2011-01-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR14154	UPF0041 BRAIN PROTEIN 44-RELATED	coord: 15..37 score: 0.
None	No IPR available	PANTHER	PTHR14154:SF1	EARLY LIGHT-INDUCED PROTEIN	coord: 15..37 score: 0.
None	No IPR available	PANTHER	PTHR14154	UPF0041 BRAIN PROTEIN 44-RELATED	coord: 8..43 score: 4.7
None	No IPR available	PANTHER	PTHR14154:SF1	EARLY LIGHT-INDUCED PROTEIN	coord: 8..43 score: 4.7

Properties


Property Name	Value
Singlet in analysis	Vaccinium corymbosum unigene v1

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>DW043389 ID=DW043389; Name=DW043389; organism=Vaccinium corymbosum; type=EST; length=560bp
GGTTCAACAAAATTTTGTATTCATAATATTACCATCATTTCAACTTTACA
AAATTCAACTACTCCTATATGTTTTTTTTTGTGGGTACAACTACAAGTGC
GACGCCATCTTGATATAAGTCCGAAATTTCATACAAAGTGCACCTACACA
AGGGCTCCACCTTTAGACAAACTCGGTGAAGGCCAATGCAACTAAACCCA
GCATATGCAAATCTCCCATTCCACATCTCAGCATCAGCGCTAAAGAATTC
TTTCGACTTTGACTCCACGCTCACTCCACTGAACTGAGGAATCAAAGATG
CTCTCGGATAGCACACCGGAAGTCAGCAAAAACCATGGGATCCCGCCGTT
GGATATCTGAGCAAACACATCCTGACCACTGCATAGTTCCACGGCCTATT
GCCTGCCCGAAGCCGATCATGGCGAGTCTGCCGTTGATTCTCTCCCGTGC
TGGCCCGCCTGAATCCGGAAACCGTTGNAAGGAAATTCGGGTGGCTGGAC
CCCTTTAGCCCCCTTTTCGGGGGGCCGCAACGCGTGGGGCCGGGGGAAGG
TTTTTTCGAA

Annotated Terms

The following terms have been associated with this EST:

Vocabulary: **INTERPRO**
Term	Definition
noIPR	unintegrated