DW043411

EST Overview
NameDW043411
Unique NameDW043411
TypeEST
OrganismVaccinium corymbosum (northern highbush blueberry)
Sequence length600
Libraries
Library NameType
LIBEST_018810 Subtracted cDNA library of Vaccinium corymbosumcdna_library
Unigenes
This EST is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Vaccinium corymbosum unigene v1EST
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
Vaccinium corymbosum unigene v12011-01-18
BLAST: Vaccinium corymbosum unigene v1 vs TrEMBL2011-01-18
InterProScan analysis for Vaccinium corymbosum unigene v12011-01-18
Homology
BLAST of DW043411 vs. TrEMBL
Match: Q68YT3|Q68YT3_VACCO (14 kDa dehydrin OS=Vaccinium corymbosum GN=bbdhn6 PE=4 SV=1)

HSP 1 Score: 145.206 bits (365), Expect = 3.329e-33
Identity = 69/92 (75.00%), Postives = 76/92 (82.61%), Query Frame = 3
Query:   93 DVVRGTRYKHRYS---CKASATPEQKKGGGLMDKVKDKITGDHGGSADQQQSECKPDQRKEGGGIMDKVKDKVPRVHGGGADQQRGECKPDQ 359
            D  +G + + +Y     ++   PEQKKGGGLMDKVKDKI G HGGSADQQQSECKPDQRKEGGGIMDKVKDK+P VHGGGADQQRGECKPDQ
Sbjct:    6 DKNKGGQQQQQYKPDQLQSECNPEQKKGGGLMDKVKDKIPGGHGGSADQQQSECKPDQRKEGGGIMDKVKDKIPGVHGGGADQQRGECKPDQ 97          

HSP 2 Score: 65.4698 bits (158), Expect = 3.352e-9
Identity = 30/53 (56.60%), Postives = 39/53 (73.58%), Query Frame = 3
Query:  105 GTRYKHRYSCKASATPEQKKGGGLMDKVKDKITGDHGGSADQQQSECKPDQRK 263
            G+  + +  CK     ++K+GGG+MDKVKDKI G HGG ADQQ+ ECKPDQR+
Sbjct:   50 GSADQQQSECKPD---QRKEGGGIMDKVKDKIPGVHGGGADQQRGECKPDQRR 99          
BLAST of DW043411 vs. TrEMBL
Match: O22623|O22623_VACCO (Dehydrin 1 OS=Vaccinium corymbosum GN=bbdhn1 PE=2 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 3.698e-16
Identity = 48/88 (54.55%), Postives = 56/88 (63.64%), Query Frame = 3
Query:  153 EQKKGGGLMDKVKDKITGDHGGSA-------------------DQQQSECKPDQRKEGGGIMDKVKDKVPRVHGGGADQQRGECKPDQ 359
            ++K+GGGLMDKVKDKI G +GGSA                   DQQ+ E K DQRKEGGG+MDKVKD +    GGGAD+ RGE K DQ
Sbjct:  223 QRKEGGGLMDKVKDKIPGGNGGSAADQHQGVYGQDQQLGGYRQDQQRGEYKQDQRKEGGGLMDKVKDTIHGGAGGGADKHRGEYKQDQ 310          

HSP 2 Score: 75.485 bits (184), Expect = 3.239e-12
Identity = 51/128 (39.84%), Postives = 57/128 (44.53%), Query Frame = 3
Query:  114 YKHRYSCKASATPEQKKGGGLMDKVKDKITGDHGGSADQQQS---------------------------ECKPDQRKEGGGIMDKVKDKVPRVHGGGA-------------------DQQRGECKPDQ 359
            YK           + K+GGGL+ KVKDKI G  GGSADQ Q                            E K DQRKEGGG+MDKVKDK+P  +GG A                   DQQRGE K DQ
Sbjct:  149 YKQDQQLGGYRQDQHKEGGGLIYKVKDKIHGGDGGSADQHQGIYGQDQQLGGYRQDQQLGGYRQDQQHGEYKQDQRKEGGGLMDKVKDKIPGGNGGSAADQHQGVYGQDQQLGGYRQDQQRGEYKQDQ 276          

HSP 3 Score: 68.5514 bits (166), Expect = 3.960e-10
Identity = 41/87 (47.13%), Postives = 48/87 (55.17%), Query Frame = 3
Query:  153 EQKKGGGLMDKVKDKITGDHGGSADQQQSECK------------------PDQRKEGGGIMDKVKDKVPRVHGGGADQQRGECKPDQ 359
            ++K+GGGLMDKVKDKI G   GSADQ Q   K                   DQ KEGGG++ KVKDK+    GG ADQ +G    DQ
Sbjct:  110 QRKEGGGLMDKVKDKIHGGGVGSADQHQDGYKQDQLHGGYKQDQQLGGYRQDQHKEGGGLIYKVKDKIHGGDGGSADQHQGIYGQDQ 196          

HSP 4 Score: 61.6178 bits (148), Expect = 4.841e-8
Identity = 45/104 (43.27%), Postives = 54/104 (51.92%), Query Frame = 3
Query:  141 SATPEQKKGGGLMDKVKDKITG-----DHGGSA--------------DQQQSEC---------KPDQRKEGGGIMDKVKDKVPRVHGGG---ADQQRGECKPDQ 359
            S   ++K+GGGLM ++KDKI G     D GG                DQQ SE          + DQRKEGGG+MDKVKDK   +HGGG   ADQ +   K DQ
Sbjct:   44 SRQDQRKEGGGLMGELKDKIHGGGVGTDGGGVGSVDPHGHQGGKYRHDQQHSEYVQDQQPGGYRQDQRKEGGGLMDKVKDK---IHGGGVGSADQHQDGYKQDQ 144          
BLAST of DW043411 vs. TrEMBL
Match: Q9M5W7|Q9M5W7_VACCO (Dehydrin (Fragment) OS=Vaccinium corymbosum PE=2 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 3.130e-15
Identity = 47/88 (53.41%), Postives = 55/88 (62.50%), Query Frame = 3
Query:  153 EQKKGGGLMDKVKDKITGDHGGSA-------------------DQQQSECKPDQRKEGGGIMDKVKDKVPRVHGGGADQQRGECKPDQ 359
            ++K+GG LMDKVKDKI G +GGSA                   DQQ+ E K DQRKEGGG+MDKVKD +    GGGAD+ RGE K DQ
Sbjct:  117 QRKEGGWLMDKVKDKIPGGNGGSAADQHQGVYGQDQQLGGYRQDQQRGEYKQDQRKEGGGLMDKVKDTIHGGAGGGADKHRGEYKQDQ 204          

HSP 2 Score: 72.0182 bits (175), Expect = 3.582e-11
Identity = 48/115 (41.74%), Postives = 54/115 (46.96%), Query Frame = 3
Query:  153 EQKKGGGLMDKVKDKITGDHGGSADQQQS---------------------------ECKPDQRKEGGGIMDKVKDKVPRVHGGGA-------------------DQQRGECKPDQ 359
            + K+GGGL+ KVKDKI G  GGSADQ Q                            E K DQRKEGG +MDKVKDK+P  +GG A                   DQQRGE K DQ
Sbjct:   56 QHKEGGGLIYKVKDKIHGGDGGSADQHQGIYGQDQQLGGYRQDQQLGGYRQDQQHGEYKQDQRKEGGWLMDKVKDKIPGGNGGSAADQHQGVYGQDQQLGGYRQDQQRGEYKQDQ 170          
BLAST of DW043411 vs. TrEMBL
Match: Q9M5W5|Q9M5W5_VACCO (Dehydrin (Fragment) OS=Vaccinium corymbosum PE=2 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 3.130e-15
Identity = 47/88 (53.41%), Postives = 55/88 (62.50%), Query Frame = 3
Query:  153 EQKKGGGLMDKVKDKITGDHGGSA-------------------DQQQSECKPDQRKEGGGIMDKVKDKVPRVHGGGADQQRGECKPDQ 359
            ++K+GG LMDKVKDKI G +GGSA                   DQQ+ E K DQRKEGGG+MDKVKD +    GGGAD+ RGE K DQ
Sbjct:  229 QRKEGGWLMDKVKDKIPGGNGGSAADQHQGVYGQDQQLGGYRQDQQRGEYKQDQRKEGGGLMDKVKDTIHGGAGGGADKHRGEYKQDQ 316          

HSP 2 Score: 72.0182 bits (175), Expect = 3.582e-11
Identity = 48/115 (41.74%), Postives = 54/115 (46.96%), Query Frame = 3
Query:  153 EQKKGGGLMDKVKDKITGDHGGSADQQQS---------------------------ECKPDQRKEGGGIMDKVKDKVPRVHGGGA-------------------DQQRGECKPDQ 359
            + K+GGGL+ KVKDKI G  GGSADQ Q                            E K DQRKEGG +MDKVKDK+P  +GG A                   DQQRGE K DQ
Sbjct:  168 QHKEGGGLIYKVKDKIHGGDGGSADQHQGIYGQDQQLGGYRQDQQLGGYRQDQQHGEYKQDQRKEGGWLMDKVKDKIPGGNGGSAADQHQGVYGQDQQLGGYRQDQQRGEYKQDQ 282          
BLAST of DW043411 vs. TrEMBL
Match: Q9M5W6|Q9M5W6_VACCO (Dehydrin (Fragment) OS=Vaccinium corymbosum PE=2 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 2.650e-14
Identity = 46/87 (52.87%), Postives = 53/87 (60.92%), Query Frame = 3
Query:  153 EQKKGGGLMDKVKDKITGDHGGSADQ------------------QQSECKPDQRKEGGGIMDKVKDKVPRVHGGGADQQRGECKPDQ 359
            + K+GGGL+ KVKDKI G  GGSADQ                  Q+ E K DQRKEGGG+MDKVKD +    GGGAD+ RGE K DQ
Sbjct:  128 QHKEGGGLIYKVKDKIHGGDGGSADQHQGIYGQDQQLGGYRQDQQRGEYKQDQRKEGGGLMDKVKDTIHGGAGGGADKHRGEYKQDQ 214          

HSP 2 Score: 59.6918 bits (143), Expect = 1.840e-7
Identity = 40/95 (42.11%), Postives = 48/95 (50.53%), Query Frame = 3
Query:  153 EQKKGG--------GLMDKVKDKITGDHGGSADQQQSECKPDQR------------------KEGGGIMDKVKDKVPRVHGGGADQQRGECKPDQ 359
            +Q++GG        GL DKVKDKI G   GSADQ Q   K DQ+                  KEGGG++ KVKDK+    GG ADQ +G    DQ
Sbjct:   68 DQQRGGYRQDQHNEGLADKVKDKIHGGGVGSADQHQGGYKQDQQPGGYGQDQQPGGYRQDQHKEGGGLIYKVKDKIHGGDGGSADQHQGIYGQDQ 162          
BLAST of DW043411 vs. TrEMBL
Match: Q9M5W8|Q9M5W8_VACCO (Dehydrin (Fragment) OS=Vaccinium corymbosum PE=2 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 4.998e-13
Identity = 44/82 (53.66%), Postives = 49/82 (59.76%), Query Frame = 3
Query:  171 GLMDKVKDKITGDHGGSA-------------------DQQQSECKPDQRKEGGGIMDKVKDKVPRVHGGGADQQRGECKPDQ 359
            GL DKVKDKI G +GGSA                   DQQ+ E K DQRKEGGG+MDKVKD +    GGGAD+ RGE K DQ
Sbjct:   46 GLADKVKDKIPGGNGGSAADQHQGVYGQDQQLGGYRQDQQRGEYKQDQRKEGGGLMDKVKDTIHGGAGGGADKHRGEYKQDQ 127          
The following BLAST results are available for this feature:
BLAST of DW043411 vs. TrEMBL
Analysis Date: 2011-01-18 (BLAST: Vaccinium corymbosum unigene v1 vs TrEMBL)
Total hits: 6
Match NameE-valueIdentityDescription
Q68YT3|Q68YT3_VACCO3.329e-3375.0014 kDa dehydrin OS=Vaccinium corymbosum GN=bbdhn6 ... [more]
O22623|O22623_VACCO3.698e-1654.55Dehydrin 1 OS=Vaccinium corymbosum GN=bbdhn1 PE=2 ... [more]
Q9M5W7|Q9M5W7_VACCO3.130e-1553.41Dehydrin (Fragment) OS=Vaccinium corymbosum PE=2 S... [more]
Q9M5W5|Q9M5W5_VACCO3.130e-1553.41Dehydrin (Fragment) OS=Vaccinium corymbosum PE=2 S... [more]
Q9M5W6|Q9M5W6_VACCO2.650e-1452.87Dehydrin (Fragment) OS=Vaccinium corymbosum PE=2 S... [more]
Q9M5W8|Q9M5W8_VACCO4.998e-1353.66Dehydrin (Fragment) OS=Vaccinium corymbosum PE=2 S... [more]
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InterPro
Analysis Name: InterProScan analysis for Vaccinium corymbosum unigene v1
Date Performed: 2011-01-18
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000167DehydrinPFAMPF00257Dehydrincoord: 21..71
score: 2.1
NoneNo IPR availableSEGsegsegcoord: 3..23
score: NAcoord: 41..53
score

Properties
Property NameValue
Singlet in analysisVaccinium corymbosum unigene v1
Sequences
The following sequences are available for this feature:

EST sequence

>DW043411 ID=DW043411; Name=DW043411; organism=Vaccinium corymbosum; type=EST; length=600bp
GTACATACNGCTCCGGGCATCANGAATAAACACACTACACATAAAGGGAC
TATTGTACACTGACACGGTTTAAACGAATTACGCACACTTAAGACGTGGT
ACGCGGCACGAGGTACAAACACAGATACAGCTGCAAAGCGAGTGCAACAC
CGGAGCAGAAGAAAGGTGGAGGGCTAATGGACAAGGTGAAGGATAAGATC
ACTGGCGACCATGGTGGTAGTGCTGATCAGCAGCAAAGCGAGTGCAAGCC
GGATCAGCGCAAGGAAGGTGGAGGGATTATGGACAAGGTGAAGGATAAGG
TCCCCCGCGTCCATGGTGGTGGTGCTGATCAACAGCGCGGCGAGTGCAAG
CCGGATCAGCGGCCGCGGNGATAAAGATCCGAATCATCAATACGCGTTNA
TTCTATATAACGCCTTCCTAACGCCATAGCCTAACTTCATAATAACCGGT
TGTGGGAACCCAGAAGTTTCTCCCTTTGGGGAAAGAATGGCACCAATTAA
CAGTTTGGAAGGGGGGCAACAAACAAAAACTCGGAAGAAAGTTGGTTTGG
TTGGTTCACTTTCTCAATTGACCCCGGGTAATTCACATAATTACGNCNGT
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Annotated Terms
The following terms have been associated with this EST:
Vocabulary: Biological Process
TermDefinition
GO:0006950response to stress
GO:0009415response to water
Vocabulary: INTERPRO
TermDefinition
IPR000167Dehydrin
noIPRunintegrated