DW043411
EST Overview
Libraries
Unigenes
This EST is part of the following unigenes:
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DW043411 vs. TrEMBL
Match: Q68YT3|Q68YT3_VACCO (14 kDa dehydrin OS=Vaccinium corymbosum GN=bbdhn6 PE=4 SV=1) HSP 1 Score: 145.206 bits (365), Expect = 3.329e-33 Identity = 69/92 (75.00%), Postives = 76/92 (82.61%), Query Frame = 3 Query: 93 DVVRGTRYKHRYS---CKASATPEQKKGGGLMDKVKDKITGDHGGSADQQQSECKPDQRKEGGGIMDKVKDKVPRVHGGGADQQRGECKPDQ 359 D +G + + +Y ++ PEQKKGGGLMDKVKDKI G HGGSADQQQSECKPDQRKEGGGIMDKVKDK+P VHGGGADQQRGECKPDQ Sbjct: 6 DKNKGGQQQQQYKPDQLQSECNPEQKKGGGLMDKVKDKIPGGHGGSADQQQSECKPDQRKEGGGIMDKVKDKIPGVHGGGADQQRGECKPDQ 97 HSP 2 Score: 65.4698 bits (158), Expect = 3.352e-9 Identity = 30/53 (56.60%), Postives = 39/53 (73.58%), Query Frame = 3 Query: 105 GTRYKHRYSCKASATPEQKKGGGLMDKVKDKITGDHGGSADQQQSECKPDQRK 263 G+ + + CK ++K+GGG+MDKVKDKI G HGG ADQQ+ ECKPDQR+ Sbjct: 50 GSADQQQSECKPD---QRKEGGGIMDKVKDKIPGVHGGGADQQRGECKPDQRR 99
BLAST of DW043411 vs. TrEMBL
Match: O22623|O22623_VACCO (Dehydrin 1 OS=Vaccinium corymbosum GN=bbdhn1 PE=2 SV=1) HSP 1 Score: 88.5817 bits (218), Expect = 3.698e-16 Identity = 48/88 (54.55%), Postives = 56/88 (63.64%), Query Frame = 3 Query: 153 EQKKGGGLMDKVKDKITGDHGGSA-------------------DQQQSECKPDQRKEGGGIMDKVKDKVPRVHGGGADQQRGECKPDQ 359 ++K+GGGLMDKVKDKI G +GGSA DQQ+ E K DQRKEGGG+MDKVKD + GGGAD+ RGE K DQ Sbjct: 223 QRKEGGGLMDKVKDKIPGGNGGSAADQHQGVYGQDQQLGGYRQDQQRGEYKQDQRKEGGGLMDKVKDTIHGGAGGGADKHRGEYKQDQ 310 HSP 2 Score: 75.485 bits (184), Expect = 3.239e-12 Identity = 51/128 (39.84%), Postives = 57/128 (44.53%), Query Frame = 3 Query: 114 YKHRYSCKASATPEQKKGGGLMDKVKDKITGDHGGSADQQQS---------------------------ECKPDQRKEGGGIMDKVKDKVPRVHGGGA-------------------DQQRGECKPDQ 359 YK + K+GGGL+ KVKDKI G GGSADQ Q E K DQRKEGGG+MDKVKDK+P +GG A DQQRGE K DQ Sbjct: 149 YKQDQQLGGYRQDQHKEGGGLIYKVKDKIHGGDGGSADQHQGIYGQDQQLGGYRQDQQLGGYRQDQQHGEYKQDQRKEGGGLMDKVKDKIPGGNGGSAADQHQGVYGQDQQLGGYRQDQQRGEYKQDQ 276 HSP 3 Score: 68.5514 bits (166), Expect = 3.960e-10 Identity = 41/87 (47.13%), Postives = 48/87 (55.17%), Query Frame = 3 Query: 153 EQKKGGGLMDKVKDKITGDHGGSADQQQSECK------------------PDQRKEGGGIMDKVKDKVPRVHGGGADQQRGECKPDQ 359 ++K+GGGLMDKVKDKI G GSADQ Q K DQ KEGGG++ KVKDK+ GG ADQ +G DQ Sbjct: 110 QRKEGGGLMDKVKDKIHGGGVGSADQHQDGYKQDQLHGGYKQDQQLGGYRQDQHKEGGGLIYKVKDKIHGGDGGSADQHQGIYGQDQ 196 HSP 4 Score: 61.6178 bits (148), Expect = 4.841e-8 Identity = 45/104 (43.27%), Postives = 54/104 (51.92%), Query Frame = 3 Query: 141 SATPEQKKGGGLMDKVKDKITG-----DHGGSA--------------DQQQSEC---------KPDQRKEGGGIMDKVKDKVPRVHGGG---ADQQRGECKPDQ 359 S ++K+GGGLM ++KDKI G D GG DQQ SE + DQRKEGGG+MDKVKDK +HGGG ADQ + K DQ Sbjct: 44 SRQDQRKEGGGLMGELKDKIHGGGVGTDGGGVGSVDPHGHQGGKYRHDQQHSEYVQDQQPGGYRQDQRKEGGGLMDKVKDK---IHGGGVGSADQHQDGYKQDQ 144
BLAST of DW043411 vs. TrEMBL
Match: Q9M5W7|Q9M5W7_VACCO (Dehydrin (Fragment) OS=Vaccinium corymbosum PE=2 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 3.130e-15 Identity = 47/88 (53.41%), Postives = 55/88 (62.50%), Query Frame = 3 Query: 153 EQKKGGGLMDKVKDKITGDHGGSA-------------------DQQQSECKPDQRKEGGGIMDKVKDKVPRVHGGGADQQRGECKPDQ 359 ++K+GG LMDKVKDKI G +GGSA DQQ+ E K DQRKEGGG+MDKVKD + GGGAD+ RGE K DQ Sbjct: 117 QRKEGGWLMDKVKDKIPGGNGGSAADQHQGVYGQDQQLGGYRQDQQRGEYKQDQRKEGGGLMDKVKDTIHGGAGGGADKHRGEYKQDQ 204 HSP 2 Score: 72.0182 bits (175), Expect = 3.582e-11 Identity = 48/115 (41.74%), Postives = 54/115 (46.96%), Query Frame = 3 Query: 153 EQKKGGGLMDKVKDKITGDHGGSADQQQS---------------------------ECKPDQRKEGGGIMDKVKDKVPRVHGGGA-------------------DQQRGECKPDQ 359 + K+GGGL+ KVKDKI G GGSADQ Q E K DQRKEGG +MDKVKDK+P +GG A DQQRGE K DQ Sbjct: 56 QHKEGGGLIYKVKDKIHGGDGGSADQHQGIYGQDQQLGGYRQDQQLGGYRQDQQHGEYKQDQRKEGGWLMDKVKDKIPGGNGGSAADQHQGVYGQDQQLGGYRQDQQRGEYKQDQ 170
BLAST of DW043411 vs. TrEMBL
Match: Q9M5W5|Q9M5W5_VACCO (Dehydrin (Fragment) OS=Vaccinium corymbosum PE=2 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 3.130e-15 Identity = 47/88 (53.41%), Postives = 55/88 (62.50%), Query Frame = 3 Query: 153 EQKKGGGLMDKVKDKITGDHGGSA-------------------DQQQSECKPDQRKEGGGIMDKVKDKVPRVHGGGADQQRGECKPDQ 359 ++K+GG LMDKVKDKI G +GGSA DQQ+ E K DQRKEGGG+MDKVKD + GGGAD+ RGE K DQ Sbjct: 229 QRKEGGWLMDKVKDKIPGGNGGSAADQHQGVYGQDQQLGGYRQDQQRGEYKQDQRKEGGGLMDKVKDTIHGGAGGGADKHRGEYKQDQ 316 HSP 2 Score: 72.0182 bits (175), Expect = 3.582e-11 Identity = 48/115 (41.74%), Postives = 54/115 (46.96%), Query Frame = 3 Query: 153 EQKKGGGLMDKVKDKITGDHGGSADQQQS---------------------------ECKPDQRKEGGGIMDKVKDKVPRVHGGGA-------------------DQQRGECKPDQ 359 + K+GGGL+ KVKDKI G GGSADQ Q E K DQRKEGG +MDKVKDK+P +GG A DQQRGE K DQ Sbjct: 168 QHKEGGGLIYKVKDKIHGGDGGSADQHQGIYGQDQQLGGYRQDQQLGGYRQDQQHGEYKQDQRKEGGWLMDKVKDKIPGGNGGSAADQHQGVYGQDQQLGGYRQDQQRGEYKQDQ 282
BLAST of DW043411 vs. TrEMBL
Match: Q9M5W6|Q9M5W6_VACCO (Dehydrin (Fragment) OS=Vaccinium corymbosum PE=2 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 2.650e-14 Identity = 46/87 (52.87%), Postives = 53/87 (60.92%), Query Frame = 3 Query: 153 EQKKGGGLMDKVKDKITGDHGGSADQ------------------QQSECKPDQRKEGGGIMDKVKDKVPRVHGGGADQQRGECKPDQ 359 + K+GGGL+ KVKDKI G GGSADQ Q+ E K DQRKEGGG+MDKVKD + GGGAD+ RGE K DQ Sbjct: 128 QHKEGGGLIYKVKDKIHGGDGGSADQHQGIYGQDQQLGGYRQDQQRGEYKQDQRKEGGGLMDKVKDTIHGGAGGGADKHRGEYKQDQ 214 HSP 2 Score: 59.6918 bits (143), Expect = 1.840e-7 Identity = 40/95 (42.11%), Postives = 48/95 (50.53%), Query Frame = 3 Query: 153 EQKKGG--------GLMDKVKDKITGDHGGSADQQQSECKPDQR------------------KEGGGIMDKVKDKVPRVHGGGADQQRGECKPDQ 359 +Q++GG GL DKVKDKI G GSADQ Q K DQ+ KEGGG++ KVKDK+ GG ADQ +G DQ Sbjct: 68 DQQRGGYRQDQHNEGLADKVKDKIHGGGVGSADQHQGGYKQDQQPGGYGQDQQPGGYRQDQHKEGGGLIYKVKDKIHGGDGGSADQHQGIYGQDQ 162
BLAST of DW043411 vs. TrEMBL
Match: Q9M5W8|Q9M5W8_VACCO (Dehydrin (Fragment) OS=Vaccinium corymbosum PE=2 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 4.998e-13 Identity = 44/82 (53.66%), Postives = 49/82 (59.76%), Query Frame = 3 Query: 171 GLMDKVKDKITGDHGGSA-------------------DQQQSECKPDQRKEGGGIMDKVKDKVPRVHGGGADQQRGECKPDQ 359 GL DKVKDKI G +GGSA DQQ+ E K DQRKEGGG+MDKVKD + GGGAD+ RGE K DQ Sbjct: 46 GLADKVKDKIPGGNGGSAADQHQGVYGQDQQLGGYRQDQQRGEYKQDQRKEGGGLMDKVKDTIHGGAGGGADKHRGEYKQDQ 127 The following BLAST results are available for this feature:
BLAST of DW043411 vs. TrEMBL
Analysis Date: 2011-01-18 (BLAST: Vaccinium corymbosum unigene v1 vs TrEMBL) Total hits: 6
InterPro
Analysis Name: InterProScan analysis for Vaccinium corymbosum unigene v1
Date Performed: 2011-01-18
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >DW043411 ID=DW043411; Name=DW043411; organism=Vaccinium corymbosum; type=EST; length=600bpback to top |