DW043420

EST Overview
NameDW043420
Unique NameDW043420
TypeEST
OrganismVaccinium corymbosum (northern highbush blueberry)
Sequence length458
Libraries
Library NameType
LIBEST_018810 Subtracted cDNA library of Vaccinium corymbosumcdna_library
Unigenes
This EST is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Vaccinium corymbosum unigene v1EST
Homology
BLAST of DW043420 vs. Populus trichocarpa peptide v2.0
Match: POPTR_0005s26930.1 ()

HSP 1 Score: 50.8322 bits (120), Expect = 4.300e-7
Identity = 27/37 (72.97%), Postives = 29/37 (78.38%), Query Frame = 1
Query:  145 VETKDRGLFDFMGKKEEEKHKKPQDDQEEVIVTEFEK 255
            VETKDRGLFDF+GKKEEEK       QEEVI TEFE+
Sbjct:   21 VETKDRGLFDFLGKKEEEK------PQEEVIGTEFEE 51          
BLAST of DW043420 vs. P. persica 1.0 peptide
Match: ppa010326m ()

HSP 1 Score: 54.299 bits (129), Expect = 2.789e-8
Identity = 29/40 (72.50%), Postives = 31/40 (77.50%), Query Frame = 1
Query:  148 ETKDRGLFDFMGKKEEEKHKKPQDDQEEVIVTEFEKVKVT 267
            E KDRGLFDF+GKKE EK       QEEVIVTEFEKVKV+
Sbjct:   33 EIKDRGLFDFLGKKEAEK------PQEEVIVTEFEKVKVS 66          
BLAST of DW043420 vs. TrEMBL
Match: C6KID8|C6KID8_CAMSI (Dehydrin OS=Camellia sinensis GN=sk2 PE=2 SV=1)

HSP 1 Score: 57.7658 bits (138), Expect = 4.170e-7
Identity = 38/73 (52.05%), Postives = 48/73 (65.75%), Query Frame = 1
Query:   49 EKKSNDQYGKTTITEVDEDGEKIVTDEVAVAPVETKDRGLFDFMGKKEEEKHKKPQDDQEEVIVTEFEKVKVT 267
            ++KS+D+   T I+  +       TDEV V   ET+DRGLF FMG KEEE  KKP   +EEV+VTEFEKV V+
Sbjct:   15 DEKSHDECESTVISSTN-------TDEVEV---ETQDRGLFGFMGNKEEE--KKP---EEEVMVTEFEKVHVS 72          
BLAST of DW043420 vs. TrEMBL
Match: A5BUW9|A5BUW9_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_010455 PE=3 SV=1)

HSP 1 Score: 57.3806 bits (137), Expect = 5.447e-7
Identity = 31/51 (60.78%), Postives = 38/51 (74.51%), Query Frame = 1
Query:  115 IVTDEVAVAPVETKDRGLFDFMGKKEEEKHKKPQDDQEEVIVTEFEKVKVT 267
            +V +E AV   ETKDRG+FDF+GKKEEEK       QEEVIVT+FEKV ++
Sbjct:   17 VVAEEAAV---ETKDRGIFDFLGKKEEEK------PQEEVIVTDFEKVTIS 58          
BLAST of DW043420 vs. TrEMBL
Match: C0KTL3|C0KTL3_9CARY (Dehydrin OS=Tamarix hispida GN=DHN PE=2 SV=1)

HSP 1 Score: 56.6102 bits (135), Expect = 9.291e-7
Identity = 30/53 (56.60%), Postives = 38/53 (71.70%), Query Frame = 1
Query:  109 EKIVTDEVAVAPVETKDRGLFDFMGKKEEEKHKKPQDDQEEVIVTEFEKVKVT 267
            EK+ T+E A  P+E+ DRGLFDF  KKEE K       QEEVIVT+FEKV+++
Sbjct:   13 EKMKTEEPAAPPMESTDRGLFDFGKKKEESK------PQEEVIVTDFEKVQIS 59          
The following BLAST results are available for this feature:
BLAST of DW043420 vs. Populus trichocarpa peptide v2.0
Analysis Date: 2011-01-18 (BLAST: Vaccinium corymbosum unigene v1 vs Populus trichocarpa v2.0 peptide)
Total hits: 1
Match NameE-valueIdentityDescription
POPTR_0005s26930.14.300e-772.97[more]
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BLAST of DW043420 vs. P. persica 1.0 peptide
Analysis Date: 2011-01-18 (BLAST: Vaccinium corymbosum unigene v1 vs Ppersica v1.0 peptide)
Total hits: 1
Match NameE-valueIdentityDescription
ppa010326m2.789e-872.50[more]
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BLAST of DW043420 vs. TrEMBL
Analysis Date: 2011-01-18 (BLAST: Vaccinium corymbosum unigene v1 vs TrEMBL)
Total hits: 3
Match NameE-valueIdentityDescription
C6KID8|C6KID8_CAMSI4.170e-752.05Dehydrin OS=Camellia sinensis GN=sk2 PE=2 SV=1[more]
A5BUW9|A5BUW9_VITVI5.447e-760.78Putative uncharacterized protein OS=Vitis vinifera... [more]
C0KTL3|C0KTL3_9CARY9.291e-756.60Dehydrin OS=Tamarix hispida GN=DHN PE=2 SV=1[more]
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InterPro
Analysis Name: InterProScan analysis for Vaccinium corymbosum unigene v1
Date Performed: 2011-01-18
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSEGsegsegcoord: 1..30
score: NAcoord: 34..49
score: NAcoord: 85..98
score
NoneNo IPR availableSEGsegsegcoord: 2..15
score: NAcoord: 23..36
score: NAcoord: 43..64
score
NoneNo IPR availableSEGsegsegcoord: 77..98
score
NoneNo IPR availableSEGsegsegcoord: 1..16
score: NAcoord: 27..34
score: NAcoord: 52..62
score

Properties
Property NameValue
Singlet in analysisVaccinium corymbosum unigene v1
Sequences
The following sequences are available for this feature:

EST sequence

>DW043420 ID=DW043420; Name=DW043420; organism=Vaccinium corymbosum; type=EST; length=458bp
AAGCGTGGTCGCGGCCGAGGTACATACGACACAATCTAGGCGGAGAAGGA
GAAAAAGAGCAATGATCAGTACGGCAAGACAACCATCACGGAGGTCGATG
AGGACGGCGAGAAAATAGTTACGGATGAGGTGGCAGTGGCACCGGTTGAA
ACCAAGGACCGAGGGTTGTTCGATTTCATGGGGAAGAAAGAGGAAGAGAA
GCACAAGAAGCCTCAAGATGATCAAGAGGAGGTGATCGTTACGGAATTTG
AGAAAGTGAAAGTGACGGAACCGGAGCCGGAGACGAAAGAGTGCAGGGAG
GAAGAGAAGAAGCCTGGGTTGTTGGAGAAGCTACACCGGTCCCAGTAGCA
GCTCAAGCTCCTCGAGCGACGAGGAGGAAGTAAGAGAGGGAGGCCACAAG
AANAANANCGAAGATTCCNGGANAAAAATNGGGAGANATTNCAAGGGANA
AACCNAAC
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Annotated Terms
The following terms have been associated with this EST:
Vocabulary: INTERPRO
TermDefinition
noIPRunintegrated