DW043464

EST Overview
NameDW043464
Unique NameDW043464
TypeEST
OrganismVaccinium corymbosum (northern highbush blueberry)
Sequence length597
Libraries
Library NameType
LIBEST_018810 Subtracted cDNA library of Vaccinium corymbosumcdna_library
Unigenes
This EST is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Vaccinium corymbosum unigene v1EST
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
Vaccinium corymbosum unigene v12011-01-18
BLAST: Vaccinium corymbosum unigene v1 vs Vitis vinifera peptide2011-01-25
InterProScan analysis for Vaccinium corymbosum unigene v12011-01-18
Homology
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BLAST of DW043464 vs. Vitis vinifera peptide
Match: GSVIVT01024846001 (assembled CDS)

HSP 1 Score: 54.299 bits (129), Expect = 3.991e-8
Identity = 35/80 (43.75%), Postives = 44/80 (55.00%), Query Frame = -1 
Query:  208 QEIGVAMYFFACS*MALLWAIDYLVYIDDTLFLIAV*PXXXXXXXXXXXSNTGSPPVPLAELGDLYVVQLYGV*FEPDVL 447
            ++IGVA+ F   S +AL WAID L+   DTLF I V P           S TGSP +PL E  DL V Q Y +  +P+ L
Sbjct:    5 RKIGVAVDFSQGSNIALKWAIDNLLDKGDTLFFIHVKPSQGDESRNLLWSATGSPLIPLEEFRDLDVAQKYEINLDPEFL 84
The following BLAST results are available for this feature:
BLAST of DW043464 vs. Vitis vinifera peptide
Analysis Date: 2011-01-25 (BLAST: Vaccinium corymbosum unigene v1 vs Vitis vinifera peptide)
Total hits: 1
Match NameE-valueIdentityDescription
GSVIVT010248460013.991e-843.75assembled CDS[more]
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InterPro
Analysis Name: InterProScan analysis for Vaccinium corymbosum unigene v1
Date Performed: 2011-01-18
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSEGsegsegcoord: 38..48
score
NoneNo IPR availableSEGsegsegcoord: 16..26
score: NAcoord: 33..39
score
NoneNo IPR availableSEGsegsegcoord: 25..33
score
NoneNo IPR availableSEGsegsegcoord: 25..31
score

Properties
Property NameValue
Singlet in analysisVaccinium corymbosum unigene v1
Sequences
The following sequences are available for this feature:

EST sequence

>DW043464 ID=DW043464; Name=DW043464; organism=Vaccinium corymbosum; type=EST; length=597bp
ACANGCACCTATATACANGAGCAGTGCCGCACCAGTGGCAGTGTTACCAA
TGTNCACATACATAGCTATACAACCATTGAACCAAACAGTNCACAATTAT
ACANGTACCATCACAACAGCCTCAACAAAGTTTATCAATAGCATCAACCC
AGTAAACCTAAACCACAACATACACCTATATAAGCCTGGAAAAGGTAATA
AGCATAAAAGAACATCTGGTTCAAACTAGACACCATATAACTGTACCACA
TACAGATCACCAAGCTCAGCCAAAGGAACCGGAGGTGAACCGGTGTTGGA
CCAAAGAGAACTGCGCGATACGCTCCCCTAGGAGGGCTACACAGCAATCA
AAAACAGGGTGTCATCTATATATACCAGATAATCAATAGCCCATAACAGA
GCCATCTAGCTACAAGCAAAGAAATACATGGCCACCCCTATTTCCTGTCT
ATGGTCATCTCTTTTTCTTTTCCTTTCACTCTTCTTCCAATATGGCCCTT
CCCCCAAAAAGAAANGANCAAGAAAATTTNGTTCTTTTTTGACCCAACCC
ATTGGGAAAAAAACCGTTTTTTTACCTTCGGGGTCCGCNTAANGCCT
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Annotated Terms
The following terms have been associated with this EST:
Vocabulary: INTERPRO
TermDefinition
noIPRunintegrated