DW043550

EST Overview
NameDW043550
Unique NameDW043550
TypeEST
OrganismVaccinium corymbosum (northern highbush blueberry)
Sequence length416
Libraries
Library NameType
LIBEST_018810 Subtracted cDNA library of Vaccinium corymbosumcdna_library
Unigenes
This EST is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Vaccinium corymbosum unigene v1EST
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
Vaccinium corymbosum unigene v12011-01-18
BLAST: Vaccinium corymbosum unigene v1 vs TrEMBL2011-01-18
InterProScan analysis for Vaccinium corymbosum unigene v12011-01-18
Homology
BLAST of DW043550 vs. TrEMBL
Match: B2BJD1|B2BJD1_RHOCT (Early light-induced protein 2 OS=Rhododendron catawbiense PE=2 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 1.135e-12
Identity = 50/106 (47.17%), Postives = 62/106 (58.49%), Query Frame = 3
Query:   72 TSVMQSILVSTATGVVKPARVVGLKPMTP-CWYMPRQQRSSSRLVRCMAKYGQKKEVETPVXXXXXXXXXXXXXXVRIKWAAP-RESRQTAMIRFLAAIAVELYNG 383
            +SVMQSILVS  TGV K A   GL    P   Y+PRQ R+S  LVRCMAK G+K+EVE+P+              +      P R + + AM+ F+AAIAVELY G
Sbjct:    4 SSVMQSILVSPVTGVAKGA---GLNRTIPRSCYLPRQGRNSGMLVRCMAKDGRKEEVESPIEANVAKVKTDFFDLLAFSGPGPERINGRLAMVGFVAAIAVELYKG 106          
BLAST of DW043550 vs. TrEMBL
Match: B2BJD0|B2BJD0_RHOCT (Early light-induced protein 1 OS=Rhododendron catawbiense PE=2 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 1.135e-12
Identity = 50/106 (47.17%), Postives = 62/106 (58.49%), Query Frame = 3
Query:   72 TSVMQSILVSTATGVVKPARVVGLKPMTP-CWYMPRQQRSSSRLVRCMAKYGQKKEVETPVXXXXXXXXXXXXXXVRIKWAAP-RESRQTAMIRFLAAIAVELYNG 383
            +SVMQSILVS  TGV K A   GL    P   Y+PRQ R+S  LVRCMAK G+K+EVE+P+              +      P R + + AM+ F+AAIAVELY G
Sbjct:    4 SSVMQSILVSPVTGVAKGA---GLSRTIPRSCYLPRQGRNSGMLVRCMAKDGRKEEVESPIEANVAKVRTDFFDLLAFSGPGPERINGRLAMVGFVAAIAVELYKG 106          
BLAST of DW043550 vs. TrEMBL
Match: B2BJD2|B2BJD2_RHOCT (Early light-induced protein 3 OS=Rhododendron catawbiense PE=2 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 1.255e-11
Identity = 48/105 (45.71%), Postives = 60/105 (57.14%), Query Frame = 3
Query:   72 TSVMQSILVSTATGVVKPARVVGLKPMTPCWYMPRQQRSSSRLVRCMAKYGQKKEVETPVXXXXXXXXXXXXXXVRIKWAAP-RESRQTAMIRFLAAIAVELYNG 383
            +SVMQSILVS  TGV K A +    P +   Y+PRQ R S  LVRCMAK G+K+EVE+PV              +      P R + + AM+ F+AAIAVEL  G
Sbjct:    4 SSVMQSILVSPVTGVAKGAGLSRTIPRSS--YLPRQGRDSGMLVRCMAKDGKKEEVESPVKATVAKARIDFFDLLAFSGPGPERINGRLAMVGFVAAIAVELSKG 106          
BLAST of DW043550 vs. TrEMBL
Match: B2BJD4|B2BJD4_RHOCT (Early light-induced protein 5 OS=Rhododendron catawbiense PE=2 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 1.388e-10
Identity = 48/105 (45.71%), Postives = 60/105 (57.14%), Query Frame = 3
Query:   72 TSVMQSILVSTATGVVKPARVVGLKPMTPCWYMPRQQRSSSRLVRCMAKYGQKKEVETPVXXXXXXXXXXXXXXVRIKWAAP-RESRQTAMIRFLAAIAVELYNG 383
            +SVMQSI+VS  TGV K   +    P + C Y+PRQ R+S  LVRCMAK GQK+E  +P               +  K  AP R + + AMI F+AAIAVEL  G
Sbjct:    4 SSVMQSIMVSPVTGVAKGTGLSRTIPRS-CCYLPRQGRNSGMLVRCMAKGGQKEEAGSP------PKAKVLFDLLAFKGPAPERINGRLAMIGFVAAIAVELSKG 101          
BLAST of DW043550 vs. TrEMBL
Match: B2BJD5|B2BJD5_RHOCT (Early light-induced protein 6 OS=Rhododendron catawbiense PE=2 SV=1)

HSP 1 Score: 63.1586 bits (152), Expect = 9.946e-9
Identity = 48/111 (43.24%), Postives = 61/111 (54.95%), Query Frame = 3
Query:   72 TSVMQSILVSTATGVVKPARVVGLK----PMTPCWYMPRQQRSSSRLVRCMAKYGQKKEVETPVXXXXXXXXXXXXXXVRIKWAAPRESR---QTAMIRFLAAIAVELYNG 383
            +SVMQSI+VS ATGV    +  GL     P + C Y+PRQ R+S  LVRCMAK GQK+EV T                  + ++ P   R   + AM+ F+AAIAVEL  G
Sbjct:    4 SSVMQSIMVSPATGVA--TKGTGLSRSTIPRSSC-YLPRQGRNSGALVRCMAKGGQKEEVGTSPKAKVRTDFFNL-----LAFSGPGPERINGRLAMVGFVAAIAVELSKG 106          
BLAST of DW043550 vs. TrEMBL
Match: C9E439|C9E439_CAMSI (Putative early light induced protein 2 OS=Camellia sinensis GN=ELIP2 PE=2 SV=1)

HSP 1 Score: 59.3066 bits (142), Expect = 1.436e-7
Identity = 41/105 (39.05%), Postives = 55/105 (52.38%), Query Frame = 3
Query:   72 TSVMQSILVSTATGVVKPARVVGLKPMTPCWYMPRQQRSSSRLVRCMAKYGQKKEVETPVXXXXXXXXXXXXXXVRIKWAAP-RESRQTAMIRFLAAIAVELYNG 383
            ++ MQS+L    T V   AR       TPC Y+P  Q+++S  VRCMAKYGQK++V                  +     AP R + + AMI F+AA+AVEL NG
Sbjct:    4 SATMQSVLARPVTSVTTRAR---FGQFTPCSYVPYLQKNASMQVRCMAKYGQKEDV-----TQKPKVSTKFSDVLAFSGPAPERINGRLAMIGFVAAMAVELSNG 100          
The following BLAST results are available for this feature:
BLAST of DW043550 vs. TrEMBL
Analysis Date: 2011-01-18 (BLAST: Vaccinium corymbosum unigene v1 vs TrEMBL)
Total hits: 6
Match NameE-valueIdentityDescription
B2BJD1|B2BJD1_RHOCT1.135e-1247.17Early light-induced protein 2 OS=Rhododendron cata... [more]
B2BJD0|B2BJD0_RHOCT1.135e-1247.17Early light-induced protein 1 OS=Rhododendron cata... [more]
B2BJD2|B2BJD2_RHOCT1.255e-1145.71Early light-induced protein 3 OS=Rhododendron cata... [more]
B2BJD4|B2BJD4_RHOCT1.388e-1045.71Early light-induced protein 5 OS=Rhododendron cata... [more]
B2BJD5|B2BJD5_RHOCT9.946e-943.24Early light-induced protein 6 OS=Rhododendron cata... [more]
C9E439|C9E439_CAMSI1.436e-739.05Putative early light induced protein 2 OS=Camellia... [more]
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InterPro
Analysis Name: InterProScan analysis for Vaccinium corymbosum unigene v1
Date Performed: 2011-01-18
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSEGsegsegcoord: 1..12
score

Properties
Property NameValue
Singlet in analysisVaccinium corymbosum unigene v1
Sequences
The following sequences are available for this feature:

EST sequence

>DW043550 ID=DW043550; Name=DW043550; organism=Vaccinium corymbosum; type=EST; length=416bp
CTAACAGCCATAGCCATAACACTCGAACCCTGTAACTCAATCCCTAGCTT
ATACTCTACCAATGGCCGCTTACATCAGTAATGCAGTCCATACTAGTGAG
CACGGCGACAGGTGTCGTCAAGCCGGCACGCGTGGTGGGATTGAAACCGA
TGACTCCTTGCTGGTATATGCCCCGTCAGCAGAGGAGCTCTAGCCGGCTA
GTGCGGTGCATGGCCAAGTATGGACAGAAGAAGGAAGTAGAAACTCCCGT
CACATAGTCCCAAAAGGATAAGGACAGCACCGATTCCTCAAGTGTTCGCA
TTAAGTGGGCAGCACCGAGAGAATCACGGCAGACTGCAATGATCCGCTTC
TTGGCCGCCATAGCCGTGGAACTATACAATGGTTACGGACTTTGTNACTC
CNATTTCCACCGTGGG
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Annotated Terms
The following terms have been associated with this EST:
Vocabulary: INTERPRO
TermDefinition
noIPRunintegrated