DW043561
EST Overview
Libraries
Unigenes
This EST is part of the following unigenes:
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DW043561 vs. Populus trichocarpa peptide v2.0
Match: POPTR_0005s04950.1 () HSP 1 Score: 53.5286 bits (127), Expect = 9.954e-8 Identity = 25/42 (59.52%), Postives = 31/42 (73.81%), Query Frame = 1 Query: 199 EDKTT*ADVMEDATEKLPGDKQATSENAEGVISAEMKNKPMM 324 EDKT +DV+ DAT KLP DK AT ++AEGV AEM+N P + Sbjct: 193 EDKTKLSDVLADATSKLPADKPATRKDAEGVTGAEMRNDPFL 234
BLAST of DW043561 vs. P. persica 1.0 peptide
Match: ppa020371m () HSP 1 Score: 52.373 bits (124), Expect = 1.574e-7 Identity = 24/42 (57.14%), Postives = 30/42 (71.43%), Query Frame = 1 Query: 199 EDKTT*ADVMEDATEKLPGDKQATSENAEGVISAEMKNKPMM 324 E+KT AD++ DAT KLP DK AT +AEGV AEM+N P + Sbjct: 200 EEKTKLADILADATSKLPADKPATRRDAEGVTGAEMRNDPFL 241
BLAST of DW043561 vs. P. persica 1.0 peptide
Match: ppa019572m () HSP 1 Score: 50.447 bits (119), Expect = 5.983e-7 Identity = 23/42 (54.76%), Postives = 30/42 (71.43%), Query Frame = 1 Query: 199 EDKTT*ADVMEDATEKLPGDKQATSENAEGVISAEMKNKPMM 324 +DK DV+ ATEKLP DK AT ++AEG+ SAE++N P M Sbjct: 178 QDKIKLTDVLSGATEKLPADKAATRQDAEGIASAELRNNPEM 219
BLAST of DW043561 vs. Vitis vinifera peptide
Match: GSVIVT01021881001 (assembled CDS) HSP 1 Score: 52.7582 bits (125), Expect = 1.033e-7 Identity = 25/40 (62.50%), Postives = 31/40 (77.50%), Query Frame = 1 Query: 199 EDKTT*ADVMEDATEKLPGDKQATSENAEGVISAEMKNKP 318 EDKT ADV+ DA+EKLP DK AT +AEGV+ AE++N P Sbjct: 194 EDKTKLADVLTDASEKLPRDKAATRRDAEGVVRAEVRNDP 233
BLAST of DW043561 vs. Vitis vinifera peptide
Match: GSVIVT01001170001 (assembled CDS) HSP 1 Score: 50.0618 bits (118), Expect = 6.698e-7 Identity = 24/42 (57.14%), Postives = 31/42 (73.81%), Query Frame = 1 Query: 199 EDKTT*ADVMEDATEKLPGDKQATSENAEGVISAEMKNKPMM 324 E+KT +D++ DAT KLP DK AT E+AE VI AE++N P M Sbjct: 196 ENKTKLSDILTDATAKLPDDKPATREDAERVIGAELRNDPNM 237
BLAST of DW043561 vs. TAIR peptide
Match: AT1G03120.1 (| Symbols: ATRAB28, RAB28 | responsive to abscisic acid 28 | chr1:752271-753140 FORWARD LENGTH=182) HSP 1 Score: 50.447 bits (119), Expect = 7.431e-7 Identity = 23/44 (52.27%), Postives = 31/44 (70.45%), Query Frame = 1 Query: 193 SAEDKTT*ADVMEDATEKLPGDKQATSENAEGVISAEMKNKPMM 324 S EDK AD++ DA E+LPGDK TSE+AE V+ AE+++ M Sbjct: 118 SEEDKVNIADILTDAAERLPGDKVVTSEDAEAVVGAELRSSSEM 161 The following BLAST results are available for this feature:
BLAST of DW043561 vs. Populus trichocarpa peptide v2.0
Analysis Date: 2011-01-18 (BLAST: Vaccinium corymbosum unigene v1 vs Populus trichocarpa v2.0 peptide) Total hits: 1
BLAST of DW043561 vs. P. persica 1.0 peptide
Analysis Date: 2011-01-18 (BLAST: Vaccinium corymbosum unigene v1 vs Ppersica v1.0 peptide) Total hits: 2
BLAST of DW043561 vs. Vitis vinifera peptide
Analysis Date: 2011-01-25 (BLAST: Vaccinium corymbosum unigene v1 vs Vitis vinifera peptide) Total hits: 2
BLAST of DW043561 vs. TAIR peptide
Analysis Date: 2011-02-10 (BLAST: Vaccinium corymbosum unigene v1 vs TAIR 10 peptide) Total hits: 1
InterPro
Analysis Name: InterProScan analysis for Vaccinium corymbosum unigene v1
Date Performed: 2011-01-18
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >DW043561 ID=DW043561; Name=DW043561; organism=Vaccinium corymbosum; type=EST; length=560bpback to top |