HO054820
EST Overview
Libraries
Unigenes
This EST is part of the following unigenes:
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of HO054820 vs. TrEMBL
Match: Q096D0|Q096D0_STIAU (ATP-dependent DNA helicase PcrA OS=Stigmatella aurantiaca DW4/3-1 GN=STIAU_3791 PE=4 SV=1) HSP 1 Score: 87.0409 bits (214), Expect = 6.471e-16 Identity = 47/98 (47.96%), Postives = 60/98 (61.22%), Query Frame = -3 Query: 24 RHVFVDEMLPESVLITTFTRKAAGELSSRLIDWGLGLAEHFRARAVASGDVASVAWLDGLDITSIRTGTLDSFCQEWLGTTKEVGSPSPVMLEQFAAD 317 RHV VD +LPE ++ITTFTRKAA E+ +RLI+WG L E A D A+L +DI TGTLDS C+E L + G PV++E FAA+ Sbjct: 56 RHVLVDRVLPERIMITTFTRKAAKEIRTRLIEWGTPLLEALLADRAGPLDADYRAFLRQVDINRFVTGTLDSLCEEALSGARGPGERLPVLVEAFAAN 153
BLAST of HO054820 vs. TrEMBL
Match: D3E351|D3E351_METRM (ATP-dependent DNA helicase UvrD/REP family OS=Methanobrevibacter ruminantium (strain ATCC 35063 / DSM 1093 / JCM 13430 / M1) GN=mru_1111 PE=4 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 3.675e-11 Identity = 38/106 (35.85%), Postives = 62/106 (58.49%), Query Frame = -3 Query: 18 RHVFVDEMLPESVLITTFTRKAAGELSSRLIDWGLGLAEH---FRARAVASGDVASVAWLD---GLDITSIRTGTLDSFCQEWLGTTKEVGSPSPVMLEQFAADFV 317 + +FVD++ P+ +L TTFT+KAA EL SR++ WG L + F V +G++A + +D +D I GT+DS E L ++ G+ P+++E F A+ V Sbjct: 57 KFIFVDDVQPKEILATTFTKKAASELLSRILSWGDKLKKKIPVFIMDKVMNGEMADGSVVDKVRKIDFNQINVGTIDSIADELLRVHRDAGTSQPILIEDFVANSV 162
BLAST of HO054820 vs. TrEMBL
Match: A5UJE0|A5UJE0_METS3 (DNA helicase OS=Methanobrevibacter smithii (strain PS / ATCC 35061 / DSM 861) GN=Msm_0113 PE=4 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 1.824e-10 Identity = 34/99 (34.34%), Postives = 56/99 (56.57%), Query Frame = -3 Query: 33 RHVFVDEMLPESVLITTFTRKAAGELSSRLIDWGLGLAEHFRARAVASGDVASVAWLD----GLDITSIRTGTLDSFCQEWLGTTKEVGSPSPVMLEQF 317 +++FVD++ P+ +L TTFTRKAA EL SR++ WG + + V V + +D +D+ I GT DS ++ L +E G+ P+++E F Sbjct: 57 KYIFVDDIAPDEILATTFTRKAANELHSRILSWGDQIKNYLLDNIVEDDPVKEMELMDFIEKKIDLNKINIGTTDSVAEDLLRIHREPGTNQPLVIEDF 155
BLAST of HO054820 vs. TrEMBL
Match: D2ZRJ7|D2ZRJ7_METSM (UvrD/REP helicase family protein OS=Methanobrevibacter smithii DSM 2374 GN=METSMIF1_03481 PE=4 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 1.824e-10 Identity = 34/99 (34.34%), Postives = 56/99 (56.57%), Query Frame = -3 Query: 33 RHVFVDEMLPESVLITTFTRKAAGELSSRLIDWGLGLAEHFRARAVASGDVASVAWLD----GLDITSIRTGTLDSFCQEWLGTTKEVGSPSPVMLEQF 317 +++FVD++ P+ +L TTFTRKAA EL SR++ WG + + V V + +D +D+ I GT DS ++ L +E G+ P+++E F Sbjct: 61 KYIFVDDIAPDEILATTFTRKAANELHSRILSWGDQIKNYLLDNIVEDDPVKEMELMDFIEKKIDLNKINIGTTDSVAEDLLRIHREPGTNQPLVIEDF 159
BLAST of HO054820 vs. TrEMBL
Match: B9AD39|B9AD39_METSM (Putative uncharacterized protein OS=Methanobrevibacter smithii DSM 2375 GN=METSMIALI_00261 PE=4 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 1.824e-10 Identity = 34/99 (34.34%), Postives = 56/99 (56.57%), Query Frame = -3 Query: 33 RHVFVDEMLPESVLITTFTRKAAGELSSRLIDWGLGLAEHFRARAVASGDVASVAWLD----GLDITSIRTGTLDSFCQEWLGTTKEVGSPSPVMLEQF 317 +++FVD++ P+ +L TTFTRKAA EL SR++ WG + + V V + +D +D+ I GT DS ++ L +E G+ P+++E F Sbjct: 61 KYIFVDDIAPDEILATTFTRKAANELHSRILSWGDQIKNYLLDNIVEDDPVKEMELMDFIEKKIDLNKINIGTTDSVAEDLLRIHREPGTNQPLVIEDF 159 The following BLAST results are available for this feature:
BLAST of HO054820 vs. TrEMBL
Analysis Date: 2011-01-18 (BLAST: Vaccinium corymbosum unigene v1 vs TrEMBL) Total hits: 5
InterPro
Analysis Name: InterProScan analysis for Vaccinium corymbosum unigene v1
Date Performed: 2011-01-18
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >HO054820 ID=HO054820; Name=HO054820; organism=Vaccinium corymbosum; type=EST; length=319bpback to top Annotated Terms
The
following terms have been associated with
this EST:
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