CF810807 | GDV

EST Overview


Name	CF810807
Unique Name	CF810807
Type	EST
Organism	Vaccinium corymbosum (northern highbush blueberry)
Sequence length	529

Libraries


Library Name	Type
LIBEST_014530 cDNA cold acclimated Bluecrop library	cdna_library

Unigenes

This EST is part of the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
	Vaccinium corymbosum unigene v1	EST

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
Vaccinium corymbosum unigene v1	2011-01-18
BLAST: Vaccinium corymbosum unigene v1 vs Populus trichocarpa v2.0 peptide	2011-01-18
BLAST: Vaccinium corymbosum unigene v1 vs Ppersica v1.0 peptide	2011-01-18
BLAST: Vaccinium corymbosum unigene v1 vs Swissprot	2011-01-18
BLAST: Vaccinium corymbosum unigene v1 vs TrEMBL	2011-01-18
BLAST: Vaccinium corymbosum unigene v1 vs Vitis vinifera peptide	2011-01-25
BLAST: Vaccinium corymbosum unigene v1 vs TAIR 10 peptide	2011-02-10
InterProScan analysis for Vaccinium corymbosum unigene v1	2011-01-18

Homology

[Close]

BLAST of CF810807 vs. DB:swissprot:display
Match: RS102_ARATH (40S ribosomal protein S10-2 OS=Arabidopsis thaliana GN=RPS10B PE=2 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 2.070e-22
Identity = 55/104 (52.88%), Postives = 62/104 (59.62%), Query Frame = 3

Query:    3 KSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPNTLKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEGYRGGPRGPAGDYTDKGGAPAEYQ 314
            KSKEYVRETFAWMHYYW+LTN+GI+FLRTYLNLPSEIVP TLK                                    +GYRGGP+   G+Y DK GAPA+YQ
Sbjct:   51 KSKEYVRETFAWMHYYWFLTNEGIDFLRTYLNLPSEIVPATLK----KQQKPLGRPFGGGGDRPRGPPRGDGERRFGDRDGYRGGPKS-GGEYGDKAGAPADYQ 149

[Close]

BLAST of CF810807 vs. DB:swissprot:display
Match: RS10_ORYSJ (40S ribosomal protein S10 OS=Oryza sativa subsp. japonica GN=RPS10 PE=2 SV=2)

HSP 1 Score: 102.449 bits (254), Expect = 1.342e-21
Identity = 55/105 (52.38%), Postives = 61/105 (58.10%), Query Frame = 3

Query:    3 KSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPNTLKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEGYRGGPRGPAGDY-TDKGGAPAEYQ 314
            KSKEYVRETF+W +YYWYLTNDGIE LR YLNLPSEIVP TLK                                    +GYRGGPRG  GD+  +KGGAPAE+Q
Sbjct:   50 KSKEYVRETFSWQYYYWYLTNDGIEHLRNYLNLPSEIVPATLK-KSARPPGRPFGSGPPGDRPRGPPRFEGDRPRFGDRDGYRGGPRGAPGDFGGEKGGAPAEFQ 153

[Close]

BLAST of CF810807 vs. DB:swissprot:display
Match: RS101_ARATH (40S ribosomal protein S10-1 OS=Arabidopsis thaliana GN=RPS10A PE=2 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 2.289e-21
Identity = 55/104 (52.88%), Postives = 63/104 (60.58%), Query Frame = 3

Query:    3 KSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPNTLKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEGYRGGPRGPAGDYTDKGGAPAEYQ 314
            KSKEYVRETFAWMHYYW+LTN+GIEFLRTYLNLPS++VP TLK                                    +GYRGGPRG  GD  +KGGAPA++Q
Sbjct:   50 KSKEYVRETFAWMHYYWFLTNEGIEFLRTYLNLPSDVVPATLK--KSAKPGGRPFGGPPGDRQRGPPRSDGDRPRFGDRDGYRGGPRG--GD--EKGGAPADFQ 147

[Close]

BLAST of CF810807 vs. DB:swissprot:display
Match: RS103_ARATH (40S ribosomal protein S10-3 OS=Arabidopsis thaliana GN=RPS10C PE=2 SV=2)

HSP 1 Score: 99.3673 bits (246), Expect = 1.136e-20
Identity = 52/104 (50.00%), Postives = 59/104 (56.73%), Query Frame = 3

Query:    3 KSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPNTLKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEGYRGGPRGPAGDYTDKGGAPAEYQ 314
            KSKEYVRETFAWMHYYW+LTN+GIEFLRTYLNLPS++VP TLK                                    +GYR GPR       +KGGAPA+YQ
Sbjct:   50 KSKEYVRETFAWMHYYWFLTNEGIEFLRTYLNLPSDVVPATLK--KSAKPGGRPFGGPPGDRSRGPRHEGGDRPRFGDRDGYRAGPRAGGEFGGEKGGAPADYQ 151

[Close]

BLAST of CF810807 vs. DB:swissprot:display
Match: RS10_SPOFR (40S ribosomal protein S10 OS=Spodoptera frugiperda GN=RpS10 PE=2 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 1.942e-12
Identity = 30/43 (69.77%), Postives = 37/43 (86.05%), Query Frame = 3

Query:    3 KSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPNTLK 131
            KS+ YV+E FAW H+YWYLTN+GIE+LR +L+LP EIVP TLK
Sbjct:   51 KSRGYVKEQFAWRHFYWYLTNEGIEYLRIFLHLPPEIVPATLK 93

[Close]

BLAST of CF810807 vs. DB:swissprot:display
Match: RS10_RAT (40S ribosomal protein S10 OS=Rattus norvegicus GN=Rps10 PE=2 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 3.313e-12
Identity = 29/43 (67.44%), Postives = 37/43 (86.05%), Query Frame = 3

Query:    3 KSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPNTLK 131
            KS+ YV+E FAW H+YWYLTN+GI++LR YL+LP EIVP TL+
Sbjct:   53 KSRGYVKEQFAWRHFYWYLTNEGIQYLRDYLHLPPEIVPATLR 95

[Close]

BLAST of CF810807 vs. DB:swissprot:display
Match: RS10_MOUSE (40S ribosomal protein S10 OS=Mus musculus GN=Rps10 PE=1 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 3.313e-12
Identity = 29/43 (67.44%), Postives = 37/43 (86.05%), Query Frame = 3

Query:    3 KSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPNTLK 131
            KS+ YV+E FAW H+YWYLTN+GI++LR YL+LP EIVP TL+
Sbjct:   53 KSRGYVKEQFAWRHFYWYLTNEGIQYLRDYLHLPPEIVPATLR 95

[Close]

BLAST of CF810807 vs. DB:swissprot:display
Match: RS10_HUMAN (40S ribosomal protein S10 OS=Homo sapiens GN=RPS10 PE=1 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 3.313e-12
Identity = 29/43 (67.44%), Postives = 37/43 (86.05%), Query Frame = 3

Query:    3 KSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPNTLK 131
            KS+ YV+E FAW H+YWYLTN+GI++LR YL+LP EIVP TL+
Sbjct:   53 KSRGYVKEQFAWRHFYWYLTNEGIQYLRDYLHLPPEIVPATLR 95

[Close]

BLAST of CF810807 vs. DB:swissprot:display
Match: RS10_BOVIN (40S ribosomal protein S10 OS=Bos taurus GN=RPS10 PE=2 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 3.313e-12
Identity = 29/43 (67.44%), Postives = 37/43 (86.05%), Query Frame = 3

Query:    3 KSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPNTLK 131
            KS+ YV+E FAW H+YWYLTN+GI++LR YL+LP EIVP TL+
Sbjct:   53 KSRGYVKEQFAWRHFYWYLTNEGIQYLRDYLHLPPEIVPATLR 95

[Close]

BLAST of CF810807 vs. DB:swissprot:display
Match: RS10_XENLA (40S ribosomal protein S10 OS=Xenopus laevis GN=rps10 PE=1 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 9.640e-12
Identity = 28/43 (65.12%), Postives = 37/43 (86.05%), Query Frame = 3

Query:    3 KSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPNTLK 131
            KS+ YV+E FAW H+YWYLTN+GI++LR +L+LP EIVP TL+
Sbjct:   53 KSRGYVKEQFAWRHFYWYLTNEGIQYLRDFLHLPPEIVPATLR 95

[Close]

BLAST of CF810807 vs. Populus trichocarpa peptide v2.0
Match: POPTR_0005s04190.1 ()

HSP 1 Score: 109.383 bits (272), Expect = 1.365e-24
Identity = 59/104 (56.73%), Postives = 63/104 (60.58%), Query Frame = 3

Query:    3 KSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPNTLKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEGYRGGPRGPAGDYTDKGGAPAEYQ 314
            KSKEYVRETFAWM+YYWYLTNDGIEFLRTYLNLPSEIVP TLK                                    +GYRGGPRG  GD  +KGGAPA+YQ
Sbjct:   50 KSKEYVRETFAWMYYYWYLTNDGIEFLRTYLNLPSEIVPATLK---------------------KQSKPAGDRPRFGDRDGYRGGPRGGEGD--EKGGAPADYQ 130

[Close]

BLAST of CF810807 vs. Populus trichocarpa peptide v2.0
Match: POPTR_0013s02900.1 ()

HSP 1 Score: 107.071 bits (266), Expect = 6.777e-24
Identity = 58/104 (55.77%), Postives = 63/104 (60.58%), Query Frame = 3

Query:    3 KSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPNTLKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEGYRGGPRGPAGDYTDKGGAPAEYQ 314
            KSKEYVRETFAWM+YYWYLTNDGIEFLRTYLNLPSEIVP TLK                                    +GYRGGPRG  G+  +KGGAPA+YQ
Sbjct:   50 KSKEYVRETFAWMYYYWYLTNDGIEFLRTYLNLPSEIVPATLK-KQAKPAGGRPFGGPPGDRPRGPPRFEGDRPRFGDRDGYRGGPRG--GEGGEKGGAPADYQ 150

[Close]

BLAST of CF810807 vs. Populus trichocarpa peptide v2.0
Match: POPTR_0004s07180.1 ()

HSP 1 Score: 107.071 bits (266), Expect = 6.777e-24
Identity = 58/104 (55.77%), Postives = 63/104 (60.58%), Query Frame = 3

Query:    3 KSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPNTLKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEGYRGGPRGPAGDYTDKGGAPAEYQ 314
            KSKEYVRETFAWM+YYWYLTNDGIEFLRTYLNLPSEIVP TLK                                    +GYRGGPRG  G+  +KGGAPA+YQ
Sbjct:   50 KSKEYVRETFAWMYYYWYLTNDGIEFLRTYLNLPSEIVPATLK-KQAKPAGGRPFGGPPGDRPRGPPRFEGDRPRFGDRDGYRGGPRG--GEGGEKGGAPADYQ 150

[Close]

BLAST of CF810807 vs. Populus trichocarpa peptide v2.0
Match: POPTR_0017s01150.1 ()

HSP 1 Score: 106.686 bits (265), Expect = 8.851e-24
Identity = 58/104 (55.77%), Postives = 62/104 (59.62%), Query Frame = 3

Query:    3 KSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPNTLKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEGYRGGPRGPAGDYTDKGGAPAEYQ 314
            KSKEYVRETFAWM+YYWYLTNDGIEFLRTYLNLPSEIVP TLK                                    +GYRGGPRG  G   +KGGAPA+YQ
Sbjct:   50 KSKEYVRETFAWMYYYWYLTNDGIEFLRTYLNLPSEIVPATLK-KQAKPAGGRPFGGPPGDRPRGPPRFEGDRPRFGDRDGYRGGPRGVEGG--EKGGAPADYQ 150

[Close]

BLAST of CF810807 vs. P. persica 1.0 peptide
Match: ppa012085m ()

HSP 1 Score: 114.39 bits (285), Expect = 3.021e-26
Identity = 58/104 (55.77%), Postives = 62/104 (59.62%), Query Frame = 3

Query:    3 KSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPNTLKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEGYRGGPRGPAGDYTDKGGAPAEYQ 314
            KSKEYVRETFAWMHYYWYLTNDGIEFLR YLNLPSEIVP TLK                                    +GYR GPR P GD+ DKGGAPA+Y+
Sbjct:   50 KSKEYVRETFAWMHYYWYLTNDGIEFLRNYLNLPSEIVPATLK---KQAKPPGRPLGPSGDRPRGPPRFDGGERRFGDRDGYRSGPRAPGGDFGDKGGAPADYR 150

[Close]

BLAST of CF810807 vs. P. persica 1.0 peptide
Match: ppa012109m ()

HSP 1 Score: 114.39 bits (285), Expect = 3.021e-26
Identity = 58/104 (55.77%), Postives = 62/104 (59.62%), Query Frame = 3

Query:    3 KSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPNTLKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEGYRGGPRGPAGDYTDKGGAPAEYQ 314
            KSKEYVRETFAWMHYYWYLTNDGIEFLR YLNLPSEIVP TLK                                    +GYR GPR P GD+ DKGGAPA+Y+
Sbjct:   50 KSKEYVRETFAWMHYYWYLTNDGIEFLRNYLNLPSEIVPATLK---KQAKPPGRPLGPSGDRPRGPPRFDGGERRFGDRDGYRSGPRAPGGDFGDKGGAPADYR 150

[Close]

BLAST of CF810807 vs. P. persica 1.0 peptide
Match: ppa012124m ()

HSP 1 Score: 114.39 bits (285), Expect = 3.021e-26
Identity = 58/104 (55.77%), Postives = 62/104 (59.62%), Query Frame = 3

Query:    3 KSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPNTLKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEGYRGGPRGPAGDYTDKGGAPAEYQ 314
            KSKEYVRETFAWMHYYWYLTNDGIEFLR YLNLPSEIVP TLK                                    +GYR GPR P GD+ DKGGAPA+Y+
Sbjct:   50 KSKEYVRETFAWMHYYWYLTNDGIEFLRNYLNLPSEIVPATLK---KQAKPPGRPLGPSGDRPRGPPRFDGGERRFGDRDGYRSGPRAPGGDFGDKGGAPADYR 150

[Close]

BLAST of CF810807 vs. P. persica 1.0 peptide
Match: ppa016316m ()

HSP 1 Score: 90.5077 bits (223), Expect = 4.671e-19
Identity = 40/43 (93.02%), Postives = 41/43 (95.35%), Query Frame = 3

Query:    3 KSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPNTLK 131
            KSKEY+RETFAWMHYYWYLTNDGIEFLR YLNLPSEIVP TLK
Sbjct:   69 KSKEYLRETFAWMHYYWYLTNDGIEFLRNYLNLPSEIVPATLK 111

[Close]

BLAST of CF810807 vs. TrEMBL
Match: D7TV58|D7TV58_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_25.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00019409001 PE=4 SV=1)

HSP 1 Score: 120.553 bits (301), Expect = 6.204e-26
Identity = 61/104 (58.65%), Postives = 65/104 (62.50%), Query Frame = 3

Query:    3 KSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPNTLKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEGYRGGPRGPAGDYTDKGGAPAEYQ 314
            KSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVP TLK                                    +GYRGGPRGP G++ DKGGAPA+YQ
Sbjct:   80 KSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLK---KSVKPAGRPMGPPGDRPRGPPRFEGDRPRFGDRDGYRGGPRGPPGEFGDKGGAPADYQ 180

[Close]

BLAST of CF810807 vs. TrEMBL
Match: B9RCG9|B9RCG9_RICCO (40S ribosomal protein S10, putative OS=Ricinus communis GN=RCOM_1688110 PE=4 SV=1)

HSP 1 Score: 117.472 bits (293), Expect = 5.252e-25
Identity = 59/104 (56.73%), Postives = 65/104 (62.50%), Query Frame = 3

Query:    3 KSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPNTLKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEGYRGGPRGPAGDYTDKGGAPAEYQ 314
            KSKEYVRETFAWMHYYW+LTNDGIEFLRTYLNLPSEIVP TLK                                    +GYRGGPRGP G++ DKGGAPA+Y+
Sbjct:   50 KSKEYVRETFAWMHYYWFLTNDGIEFLRTYLNLPSEIVPATLK--KQSKPLGRPMGGPPGDRPRGPSRFDGERRFGGDRDGYRGGPRGPPGEFGDKGGAPADYR 151

[Close]

BLAST of CF810807 vs. TrEMBL
Match: A9NZ81|A9NZ81_PICSI (Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1)

HSP 1 Score: 117.087 bits (292), Expect = 6.859e-25
Identity = 60/105 (57.14%), Postives = 64/105 (60.95%), Query Frame = 3

Query:    3 KSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPNTLKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEGYRGG-PRGPAGDYTDKGGAPAEYQ 314
            KSKEYVRE+FAWMHYYWYLTNDGIE+LRTYLNLPSEIVP TLK                                    +GYRGG PRG  GD+ DKGGAPAEYQ
Sbjct:   50 KSKEYVRESFAWMHYYWYLTNDGIEYLRTYLNLPSEIVPATLKKSAKPLGRPMGGGPPGGDRPRGPPRFEGDRPRFGDRDGYRGGPPRGAPGDFGDKGGAPAEYQ 154

[Close]

BLAST of CF810807 vs. TrEMBL
Match: A9NNR4|A9NNR4_PICSI (Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1)

HSP 1 Score: 112.849 bits (281), Expect = 1.294e-23
Identity = 58/105 (55.24%), Postives = 63/105 (60.00%), Query Frame = 3

Query:    3 KSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPNTLKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEGYRGG-PRGPAGDYTDKGGAPAEYQ 314
            KSKEYVRE+FAWMHYYWYLTNDGIE+LRTYLNLPSEIVP TLK                                    EGYRGG PRG  G++ DK GAPAE+Q
Sbjct:   50 KSKEYVRESFAWMHYYWYLTNDGIEYLRTYLNLPSEIVPATLKKSAKPLGRPMGGPPGGDRPPRGPRFEGGDRPRFGDREGYRGGPPRGTPGEFGDKAGAPAEFQ 154

[Close]

BLAST of CF810807 vs. TrEMBL
Match: Q2XTB2|Q2XTB2_SOLTU (40S ribosomal protein S10-like OS=Solanum tuberosum PE=2 SV=1)

HSP 1 Score: 112.079 bits (279), Expect = 2.207e-23
Identity = 59/105 (56.19%), Postives = 64/105 (60.95%), Query Frame = 3

Query:    3 KSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPNTLKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEGYRGGPRGPAGDY-TDKGGAPAEYQ 314
            KSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVP TLK                                    +GYR GPRGP G++  +KGGAPA+YQ
Sbjct:   50 KSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLK--KSAKPLGRPMGGPPGDRPRGPPRFEGDRPRYGDRDGYRAGPRGPPGEFGGEKGGAPADYQ 152

[Close]

BLAST of CF810807 vs. TrEMBL
Match: Q2XPV4|Q2XPV4_SOLTU (40S ribosomal protein S10-like protein OS=Solanum tuberosum PE=2 SV=1)

HSP 1 Score: 112.079 bits (279), Expect = 2.207e-23
Identity = 59/105 (56.19%), Postives = 64/105 (60.95%), Query Frame = 3

Query:    3 KSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPNTLKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEGYRGGPRGPAGDY-TDKGGAPAEYQ 314
            KSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVP TLK                                    +GYR GPRGP G++  +KGGAPA+YQ
Sbjct:   50 KSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLK--KSAKPLGRPMGGPPGDRPRGPPRFEGDRPRFGDRDGYRAGPRGPPGEFGGEKGGAPADYQ 152

[Close]

BLAST of CF810807 vs. TrEMBL
Match: B9RIS9|B9RIS9_RICCO (40S ribosomal protein S10, putative OS=Ricinus communis GN=RCOM_1582170 PE=4 SV=1)

HSP 1 Score: 111.309 bits (277), Expect = 3.764e-23
Identity = 59/105 (56.19%), Postives = 64/105 (60.95%), Query Frame = 3

Query:    3 KSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPNTLKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEGYRGGPRGPAGDY-TDKGGAPAEYQ 314
            KSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVP TLK                                    +GYRGGPRG  GD+  +KGGAPA++Q
Sbjct:   50 KSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLK--KSARPAGRPMGGPPGDRPRGPPRFDGDRPRFGDRDGYRGGPRGGGGDFGGEKGGAPADFQ 152

[Close]

BLAST of CF810807 vs. TrEMBL
Match: B9MZP7|B9MZP7_POPTR (Predicted protein (Fragment) OS=Populus trichocarpa GN=POPTRDRAFT_922316 PE=4 SV=1)

HSP 1 Score: 109.383 bits (272), Expect = 1.430e-22
Identity = 59/104 (56.73%), Postives = 63/104 (60.58%), Query Frame = 3

Query:    3 KSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPNTLKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEGYRGGPRGPAGDYTDKGGAPAEYQ 314
            KSKEYVRETFAWM+YYWYLTNDGIEFLRTYLNLPSEIVP TLK                                    +GYRGGPRG  GD  +KGGAPA+YQ
Sbjct:   50 KSKEYVRETFAWMYYYWYLTNDGIEFLRTYLNLPSEIVPATLK---------------------KQSKPAGDRPRFGDRDGYRGGPRGGEGD--EKGGAPADYQ 130

[Close]

BLAST of CF810807 vs. TrEMBL
Match: C6SY19|C6SY19_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1)

HSP 1 Score: 108.997 bits (271), Expect = 1.868e-22
Identity = 59/106 (55.66%), Postives = 65/106 (61.32%), Query Frame = 3

Query:    3 KSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPNTLKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEGYRGGPR-GPAGDY-TDKGGAPAEYQ 314
            KS+EYVRETFAWMHYYW+LTNDGIEFLRTYLNLPSEIVP TLK                                    +GYRGGPR GP GD+  DKGGAPA+Y+
Sbjct:   50 KSREYVRETFAWMHYYWFLTNDGIEFLRTYLNLPSEIVPATLK--KQAKPPGRPFGGPSGDRPRGPPRFEGERRFGGDRDGYRGGPRGGPGGDFGGDKGGAPADYR 153

[Close]

BLAST of CF810807 vs. TrEMBL
Match: C5YGH8|C5YGH8_SORBI (Putative uncharacterized protein Sb06g016800 OS=Sorghum bicolor GN=Sb06g016800 PE=4 SV=1)

HSP 1 Score: 108.227 bits (269), Expect = 3.186e-22
Identity = 56/105 (53.33%), Postives = 61/105 (58.10%), Query Frame = 3

Query:    3 KSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPNTLKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEGYRGGPRGPAGDY-TDKGGAPAEYQ 314
            KSKEYVRETF+W +YYWYLTNDGIE LR YLNLPSEIVP TLK                                    +GYRGGPRG  GD+  DKGGAPAE+Q
Sbjct:   50 KSKEYVRETFSWQYYYWYLTNDGIEHLRNYLNLPSEIVPATLKKSARPPGRPFGSGPPGDRPPRGPGRFEGDRPRFGDRDGYRGGPRGAPGDFGGDKGGAPAEFQ 154

[Close]

BLAST of CF810807 vs. Vitis vinifera peptide
Match: GSVIVT01019409001 (assembled CDS)

HSP 1 Score: 120.553 bits (301), Expect = 3.619e-28
Identity = 61/104 (58.65%), Postives = 65/104 (62.50%), Query Frame = 3

Query:    3 KSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPNTLKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEGYRGGPRGPAGDYTDKGGAPAEYQ 314
            KSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVP TLK                                    +GYRGGPRGP G++ DKGGAPA+YQ
Sbjct:   80 KSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLK---KSVKPAGRPMGPPGDRPRGPPRFEGDRPRFGDRDGYRGGPRGPPGEFGDKGGAPADYQ 180

[Close]

BLAST of CF810807 vs. Vitis vinifera peptide
Match: GSVIVT01028854001 (assembled CDS)

HSP 1 Score: 114.39 bits (285), Expect = 2.593e-26
Identity = 60/105 (57.14%), Postives = 65/105 (61.90%), Query Frame = 3

Query:    3 KSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPNTLKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEGYRGGPRGPAGDY-TDKGGAPAEYQ 314
            KSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVP TLK                                    +GYRGGPRGP G++  DKGGAPA++Q
Sbjct:   85 KSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLK--KSVKPPGRPMGGPPGDRPRGPPRFDGDRPRFGDRDGYRGGPRGPPGEFGGDKGGAPADFQ 187

[Close]

BLAST of CF810807 vs. TAIR peptide
Match: AT5G41520.2 (| Symbols: | RNA binding Plectin/S10 domain-containing protein | chr5:16609377-16610203 REVERSE LENGTH=134)

HSP 1 Score: 105.145 bits (261), Expect = 2.238e-23
Identity = 55/104 (52.88%), Postives = 62/104 (59.62%), Query Frame = 3

Query:    3 KSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPNTLKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEGYRGGPRGPAGDYTDKGGAPAEYQ 314
            KSKEYVRETFAWMHYYW+LTN+GI+FLRTYLNLPSEIVP TLK                                    +GYRGGP+   G+Y DK GAPA+YQ
Sbjct:    5 KSKEYVRETFAWMHYYWFLTNEGIDFLRTYLNLPSEIVPATLK----KQQKPLGRPFGGGGDRPRGPPRGDGERRFGDRDGYRGGPKS-GGEYGDKAGAPADYQ 103

[Close]

BLAST of CF810807 vs. TAIR peptide
Match: AT5G41520.1 (| Symbols: | RNA binding Plectin/S10 domain-containing protein | chr5:16609377-16610583 REVERSE LENGTH=180)

HSP 1 Score: 105.145 bits (261), Expect = 2.238e-23
Identity = 55/104 (52.88%), Postives = 62/104 (59.62%), Query Frame = 3

Query:    3 KSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPNTLKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEGYRGGPRGPAGDYTDKGGAPAEYQ 314
            KSKEYVRETFAWMHYYW+LTN+GI+FLRTYLNLPSEIVP TLK                                    +GYRGGP+   G+Y DK GAPA+YQ
Sbjct:   51 KSKEYVRETFAWMHYYWFLTNEGIDFLRTYLNLPSEIVPATLK----KQQKPLGRPFGGGGDRPRGPPRGDGERRFGDRDGYRGGPKS-GGEYGDKAGAPADYQ 149

[Close]

BLAST of CF810807 vs. TAIR peptide
Match: AT4G25740.1 (| Symbols: | RNA binding Plectin/S10 domain-containing protein | chr4:13107488-13108751 REVERSE LENGTH=177)

HSP 1 Score: 101.679 bits (252), Expect = 2.475e-22
Identity = 55/104 (52.88%), Postives = 63/104 (60.58%), Query Frame = 3

Query:    3 KSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPNTLKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEGYRGGPRGPAGDYTDKGGAPAEYQ 314
            KSKEYVRETFAWMHYYW+LTN+GIEFLRTYLNLPS++VP TLK                                    +GYRGGPRG  GD  +KGGAPA++Q
Sbjct:   50 KSKEYVRETFAWMHYYWFLTNEGIEFLRTYLNLPSDVVPATLK--KSAKPGGRPFGGPPGDRQRGPPRSDGDRPRFGDRDGYRGGPRG--GD--EKGGAPADFQ 147

[Close]

BLAST of CF810807 vs. TAIR peptide
Match: AT5G52650.1 (| Symbols: | RNA binding Plectin/S10 domain-containing protein | chr5:21355781-21357003 REVERSE LENGTH=179)

HSP 1 Score: 99.3673 bits (246), Expect = 1.228e-21
Identity = 52/104 (50.00%), Postives = 59/104 (56.73%), Query Frame = 3

Query:    3 KSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPNTLKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEGYRGGPRGPAGDYTDKGGAPAEYQ 314
            KSKEYVRETFAWMHYYW+LTN+GIEFLRTYLNLPS++VP TLK                                    +GYR GPR       +KGGAPA+YQ
Sbjct:   50 KSKEYVRETFAWMHYYWFLTNEGIEFLRTYLNLPSDVVPATLK--KSAKPGGRPFGGPPGDRSRGPRHEGGDRPRFGDRDGYRAGPRAGGEFGGEKGGAPADYQ 151

[Close]

BLAST of CF810807 vs. TAIR peptide
Match: AT4G25740.2 (| Symbols: | RNA binding Plectin/S10 domain-containing protein | chr4:13107488-13108751 REVERSE LENGTH=149)

HSP 1 Score: 92.4337 bits (228), Expect = 1.501e-19
Identity = 52/104 (50.00%), Postives = 59/104 (56.73%), Query Frame = 3

Query:    3 KSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPNTLKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEGYRGGPRGPAGDYTDKGGAPAEYQ 314
            KSKEYVRETFAWMHYYW+LTN+GIEFLRTYLNLPS++VP TLK                                        GGPRG  GD  +KGGAPA++Q
Sbjct:   50 KSKEYVRETFAWMHYYWFLTNEGIEFLRTYLNLPSDVVPATLKKSAKPGGRPF------------------------------GGPRG--GD--EKGGAPADFQ 119

The following BLAST results are available for this feature:

BLAST of CF810807 vs. DB:swissprot:display
BLAST of CF810807 vs. Populus trichocarpa peptide v2.0
BLAST of CF810807 vs. P. persica 1.0 peptide
BLAST of CF810807 vs. TrEMBL
BLAST of CF810807 vs. Vitis vinifera peptide
BLAST of CF810807 vs. TAIR peptide

BLAST of CF810807 vs. DB:swissprot:display
Analysis Date: 2011-01-18 (BLAST: Vaccinium corymbosum unigene v1 vs Swissprot)
Total hits: 10


Match Name	E-value	Identity	Description
RS102_ARATH	2.070e-22	52.88	40S ribosomal protein S10-2 OS=Arabidopsis thalian...	[more]
RS10_ORYSJ	1.342e-21	52.38	40S ribosomal protein S10 OS=Oryza sativa subsp. j...	[more]
RS101_ARATH	2.289e-21	52.88	40S ribosomal protein S10-1 OS=Arabidopsis thalian...	[more]
RS103_ARATH	1.136e-20	50.00	40S ribosomal protein S10-3 OS=Arabidopsis thalian...	[more]
RS10_SPOFR	1.942e-12	69.77	40S ribosomal protein S10 OS=Spodoptera frugiperda...	[more]
RS10_RAT	3.313e-12	67.44	40S ribosomal protein S10 OS=Rattus norvegicus GN=...	[more]
RS10_MOUSE	3.313e-12	67.44	40S ribosomal protein S10 OS=Mus musculus GN=Rps10...	[more]
RS10_HUMAN	3.313e-12	67.44	40S ribosomal protein S10 OS=Homo sapiens GN=RPS10...	[more]
RS10_BOVIN	3.313e-12	67.44	40S ribosomal protein S10 OS=Bos taurus GN=RPS10 P...	[more]
RS10_XENLA	9.640e-12	65.12	40S ribosomal protein S10 OS=Xenopus laevis GN=rps...	[more]

BLAST of CF810807 vs. Populus trichocarpa peptide v2.0
Analysis Date: 2011-01-18 (BLAST: Vaccinium corymbosum unigene v1 vs Populus trichocarpa v2.0 peptide)
Total hits: 4


Match Name	E-value	Identity
POPTR_0005s04190.1	1.365e-24	56.73	[more]
POPTR_0013s02900.1	6.777e-24	55.77	[more]
POPTR_0004s07180.1	6.777e-24	55.77	[more]
POPTR_0017s01150.1	8.851e-24	55.77	[more]

BLAST of CF810807 vs. P. persica 1.0 peptide
Analysis Date: 2011-01-18 (BLAST: Vaccinium corymbosum unigene v1 vs Ppersica v1.0 peptide)
Total hits: 4


Match Name	E-value	Identity
ppa012085m	3.021e-26	55.77	[more]
ppa012109m	3.021e-26	55.77	[more]
ppa012124m	3.021e-26	55.77	[more]
ppa016316m	4.671e-19	93.02	[more]

BLAST of CF810807 vs. TrEMBL
Analysis Date: 2011-01-18 (BLAST: Vaccinium corymbosum unigene v1 vs TrEMBL)
Total hits: 10


Match Name	E-value	Identity	Description
D7TV58\|D7TV58_VITVI	6.204e-26	58.65	Whole genome shotgun sequence of line PN40024, sca...	[more]
B9RCG9\|B9RCG9_RICCO	5.252e-25	56.73	40S ribosomal protein S10, putative OS=Ricinus com...	[more]
A9NZ81\|A9NZ81_PICSI	6.859e-25	57.14	Putative uncharacterized protein OS=Picea sitchens...	[more]
A9NNR4\|A9NNR4_PICSI	1.294e-23	55.24	Putative uncharacterized protein OS=Picea sitchens...	[more]
Q2XTB2\|Q2XTB2_SOLTU	2.207e-23	56.19	40S ribosomal protein S10-like OS=Solanum tuberosu...	[more]
Q2XPV4\|Q2XPV4_SOLTU	2.207e-23	56.19	40S ribosomal protein S10-like protein OS=Solanum ...	[more]
B9RIS9\|B9RIS9_RICCO	3.764e-23	56.19	40S ribosomal protein S10, putative OS=Ricinus com...	[more]
B9MZP7\|B9MZP7_POPTR	1.430e-22	56.73	Predicted protein (Fragment) OS=Populus trichocarp...	[more]
C6SY19\|C6SY19_SOYBN	1.868e-22	55.66	Putative uncharacterized protein OS=Glycine max PE...	[more]
C5YGH8\|C5YGH8_SORBI	3.186e-22	53.33	Putative uncharacterized protein Sb06g016800 OS=So...	[more]

BLAST of CF810807 vs. Vitis vinifera peptide
Analysis Date: 2011-01-25 (BLAST: Vaccinium corymbosum unigene v1 vs Vitis vinifera peptide)
Total hits: 2


Match Name	E-value	Identity	Description
GSVIVT01019409001	3.619e-28	58.65	assembled CDS	[more]
GSVIVT01028854001	2.593e-26	57.14	assembled CDS	[more]

BLAST of CF810807 vs. TAIR peptide
Analysis Date: 2011-02-10 (BLAST: Vaccinium corymbosum unigene v1 vs TAIR 10 peptide)
Total hits: 5


Match Name	E-value	Identity	Description
AT5G41520.2	2.238e-23	52.88	\| Symbols: \| RNA binding Plectin/S10 domain-conta...	[more]
AT5G41520.1	2.238e-23	52.88	\| Symbols: \| RNA binding Plectin/S10 domain-conta...	[more]
AT4G25740.1	2.475e-22	52.88	\| Symbols: \| RNA binding Plectin/S10 domain-conta...	[more]
AT5G52650.1	1.228e-21	50.00	\| Symbols: \| RNA binding Plectin/S10 domain-conta...	[more]
AT4G25740.2	1.501e-19	50.00	\| Symbols: \| RNA binding Plectin/S10 domain-conta...	[more]

InterPro

Analysis Name: InterProScan analysis for Vaccinium corymbosum unigene v1
Date Performed: 2011-01-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	SEG	seg	seg	coord: 5..25 score: NAcoord: 51..85 score
None	No IPR available	PANTHER	PTHR12146	40S RIBOSOMAL PROTEIN S10	coord: 1..133 score: 3.3
None	No IPR available	SEG	seg	seg	coord: 44..79 score: NAcoord: 105..134 score
None	No IPR available	SEG	seg	seg	coord: 18..43 score
None	No IPR available	SEG	seg	seg	coord: 15..37 score
None	No IPR available	SEG	seg	seg	coord: 24..50 score: NAcoord: 76..90 score: NAcoord: 133..141 score
IPR005326	Plectin/S10, N-terminal	PFAM	PF03501	S10_plectin	coord: 1..47 score: 9.1

Properties


Property Name	Value
Singlet in analysis	Vaccinium corymbosum unigene v1

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>CF810807 ID=CF810807; Name=CF810807; organism=Vaccinium corymbosum; type=EST; length=529bp
TCAAATCAAAGGAGTATGTGAGAGAGACCTTTGCTTGGATGCACTACTAC
TGGTACTTGACCAACGACGGCATTGAATTTCTCAGAACTTATCTCAATTT
GCCATCTGAGATCGTTCCCAACACTCTGAAGAGAGCAGCCCGCCCTCCTC
CTGCTGGCGGCCGTTTTGGCGGCCCACCTGGTGATCGCCCACGTGGTCCT
CCTAGGACTGATGGAGATAGGCCAAGATATGGTGATCGTGAAGGTTACCG
TGGAGGTCCAAGAGGCCCCGCTGGTGATTACACTGACAAGGGAGGCGCTC
CTGCTGAATACCAACCTGCTTTTAGGGCTCCCGGAGGAAGGCCTGGGTTT
GGCCGTGGCGGCGGTGGTGGCAGTTTTGGTGCTGGACCCGCCGGTGCAAG
TTTTGAGTAAGGAAGGTAGGGATTTGTCACGAGGACAGACTCGAGAAAGT
TTTATTGATGTACCTTAGGATACTAAACGCTGTTTGTTTTGATTGTTGGG
CGAAACTAATTATGCAGTTTTAAACGGCC

Annotated Terms

The following terms have been associated with this EST:

Vocabulary: **INTERPRO**
Term	Definition
noIPR	unintegrated
IPR005326	Plectin_eS10_N