CF810951

EST Overview
NameCF810951
Unique NameCF810951
TypeEST
OrganismVaccinium corymbosum (northern highbush blueberry)
Sequence length547
Libraries
Library NameType
LIBEST_014530 cDNA cold acclimated Bluecrop librarycdna_library
Unigenes
This EST is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Vaccinium corymbosum unigene v1EST
Homology
[Close]
BLAST of CF810951 vs. DB:swissprot:display
Match: RU2A_ARATH (U2 small nuclear ribonucleoprotein A' OS=Arabidopsis thaliana GN=At1g09760 PE=2 SV=2)

HSP 1 Score: 219.164 bits (557), Expect = 1.069e-56
Identity = 115/166 (69.28%), Postives = 126/166 (75.90%), Query Frame = 2 
Query:   41 MVRLTADLIWKSPHFFNAIRERELDLRGNKIPVIENLGATEDQFDSIDLSDNEIVKLENFPYLNRLGTLXXXXXXXXXXXXXXGEFLPKXXXXXXXXXXXXXXVEIDPLASLTKLQYLSLLDNNITKRPNYRLYVIHKLKSLRLLDFKKSETKGENRSTKAIFIAR 538
            MV+LTADLIWKSPHFFNAI+ERELDLRGNKIPVIENLGATEDQFD+IDLSDNEIVKLENFPYLNRLGTL              GEFLPK              VEIDPLAS+ KLQYLSLLDNNITK+ NYRLYVIHKLKSLR+LDF K + K E     ++F ++
Sbjct:    1 MVKLTADLIWKSPHFFNAIKERELDLRGNKIPVIENLGATEDQFDTIDLSDNEIVKLENFPYLNRLGTLLINNNRITRINPNLGEFLPKLHSLVLTNNRLVNLVEIDPLASIPKLQYLSLLDNNITKKANYRLYVIHKLKSLRVLDFIKIKAK-ERAEAASLFSSK 165
[Close]
BLAST of CF810951 vs. DB:swissprot:display
Match: RU2A_MOUSE (U2 small nuclear ribonucleoprotein A' OS=Mus musculus GN=Snrpa1 PE=1 SV=2)

HSP 1 Score: 140.584 bits (353), Expect = 4.831e-33
Identity = 77/160 (48.12%), Postives = 100/160 (62.50%), Query Frame = 2 
Query:   41 MVRLTADLIWKSPHFFNAIRERELDLRGNKIPVIENLGATEDQFDSIDLSDNEIVKLENFPYLNRLGTLXXXXXXXXXXXXXXGEFLPKXXXXXXXXXXXXXXVEIDPLASLTKLQYLSLLDNNITKRPNYRLYVIHKLKSLRLLDFKKSETKGENRSTK 520
            MV+LTA+LI ++  + NA+R+RELDLRG KIPVIENLGAT DQFD+ID SDNEI KL+ FP L RL TL               + LP                ++DPLASL  L YLS+L N +T + +YRLYVI+K+  +R+LDF+K + K    + K
Sbjct:    1 MVKLTAELIEQAAQYTNAVRDRELDLRGYKIPVIENLGATLDQFDAIDFSDNEIRKLDGFPLLRRLKTLLVNNNRICRIGEGLDQALPCLTELILTNNSLVELGDLDPLASLKSLTYLSILRNPVTNKKHYRLYVIYKVPQVRVLDFQKVKLKERQEAEK 160
[Close]
BLAST of CF810951 vs. DB:swissprot:display
Match: RU2A_MACFA (U2 small nuclear ribonucleoprotein A' OS=Macaca fascicularis GN=SNRPA1 PE=2 SV=1)

HSP 1 Score: 140.584 bits (353), Expect = 4.831e-33
Identity = 77/160 (48.12%), Postives = 100/160 (62.50%), Query Frame = 2 
Query:   41 MVRLTADLIWKSPHFFNAIRERELDLRGNKIPVIENLGATEDQFDSIDLSDNEIVKLENFPYLNRLGTLXXXXXXXXXXXXXXGEFLPKXXXXXXXXXXXXXXVEIDPLASLTKLQYLSLLDNNITKRPNYRLYVIHKLKSLRLLDFKKSETKGENRSTK 520
            MV+LTA+LI ++  + NA+R+RELDLRG KIPVIENLGAT DQFD+ID SDNEI KL+ FP L RL TL               + LP                ++DPLASL  L YLS+L N +T + +YRLYVI+K+  +R+LDF+K + K    + K
Sbjct:    1 MVKLTAELIEQAAQYTNAVRDRELDLRGYKIPVIENLGATLDQFDAIDFSDNEIRKLDGFPLLRRLKTLLVNNNRICRIGEGLDQALPCLTELILTNNSLVELGDLDPLASLKSLTYLSILRNPVTNKKHYRLYVIYKVPQVRVLDFQKVKLKERQEAEK 160
[Close]
BLAST of CF810951 vs. DB:swissprot:display
Match: RU2A_HUMAN (U2 small nuclear ribonucleoprotein A' OS=Homo sapiens GN=SNRPA1 PE=1 SV=2)

HSP 1 Score: 140.584 bits (353), Expect = 4.831e-33
Identity = 77/160 (48.12%), Postives = 100/160 (62.50%), Query Frame = 2 
Query:   41 MVRLTADLIWKSPHFFNAIRERELDLRGNKIPVIENLGATEDQFDSIDLSDNEIVKLENFPYLNRLGTLXXXXXXXXXXXXXXGEFLPKXXXXXXXXXXXXXXVEIDPLASLTKLQYLSLLDNNITKRPNYRLYVIHKLKSLRLLDFKKSETKGENRSTK 520
            MV+LTA+LI ++  + NA+R+RELDLRG KIPVIENLGAT DQFD+ID SDNEI KL+ FP L RL TL               + LP                ++DPLASL  L YLS+L N +T + +YRLYVI+K+  +R+LDF+K + K    + K
Sbjct:    1 MVKLTAELIEQAAQYTNAVRDRELDLRGYKIPVIENLGATLDQFDAIDFSDNEIRKLDGFPLLRRLKTLLVNNNRICRIGEGLDQALPCLTELILTNNSLVELGDLDPLASLKSLTYLSILRNPVTNKKHYRLYVIYKVPQVRVLDFQKVKLKERQEAEK 160
[Close]
BLAST of CF810951 vs. DB:swissprot:display
Match: RU2A_DROME (Probable U2 small nuclear ribonucleoprotein A' OS=Drosophila melanogaster GN=U2A PE=2 SV=1)

HSP 1 Score: 125.946 bits (315), Expect = 1.328e-29
Identity = 69/153 (45.10%), Postives = 91/153 (59.48%), Query Frame = 2 
Query:   41 MVRLTADLIWKSPHFFNAIRERELDLRGNKIPVIENLGATEDQFDSIDLSDNEIVKLENFPYLNRLGTLXXXXXXXXXXXXXXGEFLPKXXXXXXXXXXXXXXVEIDPLASLTKLQYLSLLDNNITKRPNYRLYVIHKLKSLRLLDFKKSETK 499
            MV+LT +LI +S  + N  RERELDLRG KIP IENLGAT DQFD+IDLSDN++ KL+N P+L RL  L               E +P                +++PL   TKL+ + LL N ++ +PNYR Y+ +K   LRLLDF+K + K
Sbjct:    1 MVKLTPELINQSMQYINPCRERELDLRGYKIPQIENLGATLDQFDTIDLSDNDLRKLDNLPHLPRLKCLLLNNNRILRISEGLEEAVPNLGSIILTGNNLQELSDLEPLVGFTKLETICLLINPVSTKPNYREYMAYKFPQLRLLDFRKIKQK 153

HSP 2 Score: 24.2534 bits (51), Expect = 1.328e-29
Identity = 9/21 (42.86%), Postives = 16/21 (76.19%), Query Frame = 3 
Query:  483 RKVKQKERIEAQKLFSSQEAE 545
            RK+KQK+R  AQ+ F +++ +
Sbjct:  148 RKIKQKDRQAAQEFFRTKQGK 168
[Close]
BLAST of CF810951 vs. DB:swissprot:display
Match: RU2A_CAEEL (Probable U2 small nuclear ribonucleoprotein A' OS=Caenorhabditis elegans GN=sap-1 PE=2 SV=1)

HSP 1 Score: 128.257 bits (321), Expect = 2.481e-29
Identity = 68/167 (40.72%), Postives = 97/167 (58.08%), Query Frame = 2 
Query:   41 MVRLTADLIWKSPHFFNAIRERELDLRGNKIPVIENLGATEDQFDSIDLSDNEIVKLENFPYLNRLGTLXXXXXXXXXXXXXXGEFLPKXXXXXXXXXXXXXXVEIDPLASLTKLQYLSLLDNNITKRPNYRLYVIHKLKSLRLLDFKKSETKGENRSTKAIFIARS 541
            MVRLT +L  + P F N++  RE++LRG KIPVIEN+G T DQFD IDL+DN+I KL+NFP  +RL TL                 LP                +I+PLA   KL+Y++ + N IT + NYR+Y+I+KL ++R++DF +     E  + K +F  +S
Sbjct:    1 MVRLTTELFAERPQFVNSVNMREINLRGQKIPVIENMGVTRDQFDVIDLTDNDIRKLDNFPTFSRLNTLYLHNNRINYIAPDIATKLPNLKTLALTNNNICELGDIEPLAECKKLEYVTFIGNPITHKDNYRMYMIYKLPTVRVIDFNRVRLT-EREAAKKMFKGKS 166
[Close]
BLAST of CF810951 vs. DB:swissprot:display
Match: RU2A_ASPFU (U2 small nuclear ribonucleoprotein A' OS=Aspergillus fumigatus GN=lea1 PE=3 SV=1)

HSP 1 Score: 113.235 bits (282), Expect = 8.260e-25
Identity = 62/162 (38.27%), Postives = 93/162 (57.41%), Query Frame = 2 
Query:   44 VRLTADLIWKSPHFFNAIRERELDLRGNKIPVIENLGATEDQFDSIDLSDNEIVKLENFPYLNRLGTLXXXXXXXXXXXXXXGEFLPKXXXXXXXXXXXXXXVEIDPLASLTKLQYLSLLDNNITKRPNYRLYVIHKLKSLRLLDFKKSETKGENRSTKAIF 529
            +RLT +LI  S  + N +++RELDLRG+KIP IENLG  +DQ D+ID +DN+I  L NFP+  RL TL                 +P                ++DPL +LT+L +L LL+N +T++ +YR +VI ++ S+R LD++K +   E    K +F
Sbjct:    1 MRLTVELIQNSLSYINPLKDRELDLRGHKIPTIENLGIAKDQ-DAIDFTDNDISSLGNFPFFPRLHTLLLARNRVKHIQPTIASTIPNLTTLVLTANNMAELADLDPLRNLTRLTHLVLLENPVTRKEHYRYWVIWRIPSVRFLDYQKVK-DAERAKAKELF 160
[Close]
BLAST of CF810951 vs. DB:swissprot:display
Match: RU2A_SCHPO (U2 small nuclear ribonucleoprotein A' OS=Schizosaccharomyces pombe GN=lea1 PE=1 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 1.722e-22
Identity = 56/148 (37.84%), Postives = 83/148 (56.08%), Query Frame = 2 
Query:   44 VRLTADLIWKSPHFFNAIRERELDLRGNKIPVIENLGATEDQFDSIDLSDNEIVKLENFPYLNRLGTLXXXXXXXXXXXXXXGEFLPKXXXXXXXXXXXXXXVEIDPLASLTKLQYLSLLDNNITKRPNYRLYVIHKLKSLRLLDFKK 487
            +RL A+ + + P F + ++E ELDLR  +IP+IENLG   D  D+ID +DN+I  L NFP + RL TL              G+ LP                ++DPLAS  +L  LS +DN + ++  YRLY+I ++ SL +LDF++
Sbjct:    1 MRLNAEFLSQVPSFISPLKETELDLRWYQIPIIENLGVLRDVHDAIDFTDNDIRYLGNFPRMKRLQTLLCGNNRITAIAPDIGKVLPNLKTLSLAQNHLQEIADLDPLASCPQLTNLSCIDNPVAQKQYYRLYLIWRIPSLHILDFER 148
[Close]
BLAST of CF810951 vs. DB:swissprot:display
Match: RU2A_USTMA (U2 small nuclear ribonucleoprotein A' OS=Ustilago maydis GN=LEA1 PE=3 SV=1)

HSP 1 Score: 102.834 bits (255), Expect = 1.116e-21
Identity = 59/157 (37.58%), Postives = 85/157 (54.14%), Query Frame = 2 
Query:   44 VRLTADLIWKSPHFFNAIRERELDLRGNKIPVIENLGATEDQFDSIDLSDNEIVKLENFPYLNRLGTLXXXXXXXXXXXXXXGEFLPKXXXXXXXXXXXXXXVEIDPLASLTKLQYLSLLDNNITKRPNYRLYVIHKLKSLRLLDFKKSETKGENRS 514
            ++LT +L+ +S    N +R+RELDLRG KIP IENLG T DQ D+IDL+DN+I  L NFP L +L TL              G  LP                E+  L+   +L+YL L+    ++   YR +VI KL  +R+LD+++ + K   R+
Sbjct:    1 MKLTPELLSRSSSSINTLRDRELDLRGLKIPAIENLGVTRDQNDAIDLTDNDIRYLGNFPLLQQLKTLQLANNLISRIDPRIGHSLPALHSLNLTNNCISDLSELVHLSKCRRLEYLCLMGTPASREAQYREFVIWKLPQVRVLDYQRIKDKERARA 157
[Close]
BLAST of CF810951 vs. DB:swissprot:display
Match: RU2A_NEUCR (U2 small nuclear ribonucleoprotein A' OS=Neurospora crassa GN=lea-1 PE=3 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 2.574e-18
Identity = 56/162 (34.57%), Postives = 81/162 (50.00%), Query Frame = 2 
Query:   44 VRLTADLIWKSPHFFNAIRERELDLRGNKIPVIENLGATEDQFDSIDLSDNEIVKLENFPYLNRLGTLXXXXXXXXXXXXXXGEFLPKXXXXXXXXXXXXXXVEIDPLASLTKLQYLSLLDNNITKRPNYRLYVIHKLKSLRLLDFKKSETKGENRSTKAIF 529
            +RLTADLI  S  + N ++ERE+DLRG++IP IENLG      D+ID +DN+I  L NFP   R+ TL                  P                +++ L    +L +L L DN +TK+ NYR +V+     +R LD+ K +   E +  K +F
Sbjct:    1 MRLTADLINNSLSYLNPLKEREIDLRGHRIPAIENLGVA-GPHDAIDFTDNDIQVLGNFPLSPRIRTLLLARNRIAQIQSTLPNATPNLKNLVLASNNIGELADLEVLGRFPRLTHLVLTDNPVTKKENYRYWVLWLCPQVRFLDYVKVK-DAERQKAKELF 160
[Close]
BLAST of CF810951 vs. Populus trichocarpa peptide v2.0
Match: POPTR_0381s00210.1 ()

HSP 1 Score: 216.853 bits (551), Expect = 1.332e-59
Identity = 111/153 (72.55%), Postives = 119/153 (77.78%), Query Frame = 2 
Query:   41 MVRLTADLIWKSPHFFNAIRERELDLRGNKIPVIENLGATEDQFDSIDLSDNEIVKLENFPYLNRLGTLXXXXXXXXXXXXXXGEFLPKXXXXXXXXXXXXXXVEIDPLASLTKLQYLSLLDNNITKRPNYRLYVIHKLKSLRLLDFKKSETK 499
            MVRLTADLIWKSPHFFNAI+ERELDLRGNKIPVIENLGATEDQFD+IDLSDNEIVKLEN PYLNRLGTL              GE+LPK               EIDPL+SL KLQ+LSLLDN ITK+PNYRLYVIHKLKSLR+LDFKK + K
Sbjct:    1 MVRLTADLIWKSPHFFNAIKERELDLRGNKIPVIENLGATEDQFDTIDLSDNEIVKLENMPYLNRLGTLIINNNRITRINPNIGEYLPKLHTLVLTNNRLVNLAEIDPLSSLPKLQFLSLLDNTITKKPNYRLYVIHKLKSLRVLDFKKVKAK 153

HSP 2 Score: 30.8018 bits (68), Expect = 1.332e-59
Identity = 14/21 (66.67%), Postives = 17/21 (80.95%), Query Frame = 3 
Query:  483 RKVKQKERIEAQKLFSSQEAE 545
            +KVK KER EA+ LFSS+E E
Sbjct:  148 KKVKAKERAEAEHLFSSKEVE 168
[Close]
BLAST of CF810951 vs. Populus trichocarpa peptide v2.0
Match: POPTR_0001s12570.1 ()

HSP 1 Score: 218.394 bits (555), Expect = 2.234e-57
Identity = 113/158 (71.52%), Postives = 122/158 (77.22%), Query Frame = 2 
Query:   41 MVRLTADLIWKSPHFFNAIRERELDLRGNKIPVIENLGATEDQFDSIDLSDNEIVKLENFPYLNRLGTLXXXXXXXXXXXXXXGEFLPKXXXXXXXXXXXXXXVEIDPLASLTKLQYLSLLDNNITKRPNYRLYVIHKLKSLRLLDFKKSETKGENRS 514
            MVRLTADL+WKSPHFFNAI+ERELDLRGNKIPVIENLGATEDQFD+IDLSDNEIVKLEN PYLNRLGTL              GE+LPK               EIDPLASL KL +LSLLDNNITK+PNYRLYVIHKLKSLR+LDFKK   KG+ R+
Sbjct:    1 MVRLTADLVWKSPHFFNAIKERELDLRGNKIPVIENLGATEDQFDTIDLSDNEIVKLENMPYLNRLGTLIINNNRITRINPNIGEYLPKLHTLVLINNRLVNLAEIDPLASLPKLHFLSLLDNNITKKPNYRLYVIHKLKSLRVLDFKK--VKGKERA 156
[Close]
BLAST of CF810951 vs. P. persica 1.0 peptide
Match: ppa018334m ()

HSP 1 Score: 217.238 bits (552), Expect = 3.537e-57
Identity = 113/166 (68.07%), Postives = 125/166 (75.30%), Query Frame = 2 
Query:   41 MVRLTADLIWKSPHFFNAIRERELDLRGNKIPVIENLGATEDQFDSIDLSDNEIVKLENFPYLNRLGTLXXXXXXXXXXXXXXGEFLPKXXXXXXXXXXXXXXVEIDPLASLTKLQYLSLLDNNITKRPNYRLYVIHKLKSLRLLDFKKSETKGENRSTKAIFIAR 538
            MVRLTADL+WKSPHFFNA++ERELDLRGNKI VIENLGATEDQFD+IDLSDNEIVKLEN PYLNRLGTL              GEFLPK              VEIDPL SL KLQ+LSLLDNNITK+PNYRLYVIHKLKSLR+LDFKK + K E    + +F ++
Sbjct:    1 MVRLTADLVWKSPHFFNALKERELDLRGNKIAVIENLGATEDQFDTIDLSDNEIVKLENLPYLNRLGTLIINNNRITRINPNIGEFLPKLHTLILTNNRLVNLVEIDPLESLPKLQFLSLLDNNITKKPNYRLYVIHKLKSLRVLDFKKVKNK-ERLEAQTLFSSK 165
[Close]
BLAST of CF810951 vs. TrEMBL
Match: B9GYT1|B9GYT1_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_830906 PE=4 SV=1)

HSP 1 Score: 216.853 bits (551), Expect = 1.465e-57
Identity = 111/153 (72.55%), Postives = 119/153 (77.78%), Query Frame = 2 
Query:   41 MVRLTADLIWKSPHFFNAIRERELDLRGNKIPVIENLGATEDQFDSIDLSDNEIVKLENFPYLNRLGTLXXXXXXXXXXXXXXGEFLPKXXXXXXXXXXXXXXVEIDPLASLTKLQYLSLLDNNITKRPNYRLYVIHKLKSLRLLDFKKSETK 499
            MVRLTADLIWKSPHFFNAI+ERELDLRGNKIPVIENLGATEDQFD+IDLSDNEIVKLEN PYLNRLGTL              GE+LPK               EIDPL+SL KLQ+LSLLDN ITK+PNYRLYVIHKLKSLR+LDFKK + K
Sbjct:    1 MVRLTADLIWKSPHFFNAIKERELDLRGNKIPVIENLGATEDQFDTIDLSDNEIVKLENMPYLNRLGTLIINNNRITRINPNIGEYLPKLHTLVLTNNRLVNLAEIDPLSSLPKLQFLSLLDNTITKKPNYRLYVIHKLKSLRVLDFKKVKAK 153

HSP 2 Score: 30.8018 bits (68), Expect = 1.465e-57
Identity = 14/21 (66.67%), Postives = 17/21 (80.95%), Query Frame = 3 
Query:  483 RKVKQKERIEAQKLFSSQEAE 545
            +KVK KER EA+ LFSS+E E
Sbjct:  148 KKVKAKERAEAEHLFSSKEVE 168
[Close]
BLAST of CF810951 vs. TrEMBL
Match: D7TFN0|D7TFN0_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_150.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00001138001 PE=4 SV=1)

HSP 1 Score: 215.312 bits (547), Expect = 2.490e-57
Identity = 110/153 (71.90%), Postives = 118/153 (77.12%), Query Frame = 2 
Query:   41 MVRLTADLIWKSPHFFNAIRERELDLRGNKIPVIENLGATEDQFDSIDLSDNEIVKLENFPYLNRLGTLXXXXXXXXXXXXXXGEFLPKXXXXXXXXXXXXXXVEIDPLASLTKLQYLSLLDNNITKRPNYRLYVIHKLKSLRLLDFKKSETK 499
            MVRLTADLIWKSPHFFNAIRERELDLRGNK+ VIENLGATEDQFD+IDLSDNEIVKLEN PYLNRLGTL              GE+LPK               EIDPL+S  KLQ+LSLLDNNITK+PNYRLYVIH+LKSLRLLDFKK + K
Sbjct:    1 MVRLTADLIWKSPHFFNAIRERELDLRGNKVAVIENLGATEDQFDTIDLSDNEIVKLENLPYLNRLGTLLINNNRITRINPNIGEYLPKLHTLVLTNNRLVNLAEIDPLSSFPKLQFLSLLDNNITKKPNYRLYVIHRLKSLRLLDFKKVKNK 153

HSP 2 Score: 31.5722 bits (70), Expect = 2.490e-57
Identity = 13/21 (61.90%), Postives = 18/21 (85.71%), Query Frame = 3 
Query:  483 RKVKQKERIEAQKLFSSQEAE 545
            +KVK KER+EA+ LF+S+E E
Sbjct:  148 KKVKNKERLEAENLFASKEVE 168
[Close]
BLAST of CF810951 vs. TrEMBL
Match: Q38M62|Q38M62_SOLTU (Putative uncharacterized protein OS=Solanum tuberosum PE=2 SV=1)

HSP 1 Score: 224.942 bits (572), Expect = 2.614e-57
Identity = 117/160 (73.12%), Postives = 125/160 (78.12%), Query Frame = 2 
Query:   41 MVRLTADLIWKSPHFFNAIRERELDLRGNKIPVIENLGATEDQFDSIDLSDNEIVKLENFPYLNRLGTLXXXXXXXXXXXXXXGEFLPKXXXXXXXXXXXXXXVEIDPLASLTKLQYLSLLDNNITKRPNYRLYVIHKLKSLRLLDFKKSETKGENRSTK 520
            MVRLTADLIWKSPHFFNAIRERELDLRGNKIPVIENLGATEDQFD+IDLSDNEIVKLENFPYLNRLGTL              GEFLPK              VEIDPLASL KL++LSLL+NNITKRPNYRLYVIHKLKSLRLLDF+K + K    ++K
Sbjct:    1 MVRLTADLIWKSPHFFNAIRERELDLRGNKIPVIENLGATEDQFDTIDLSDNEIVKLENFPYLNRLGTLLMNNNRITRINPNIGEFLPKLHTLIITSNRLTNLVEIDPLASLPKLKFLSLLENNITKRPNYRLYVIHKLKSLRLLDFRKVKQKERLEASK 160
[Close]
BLAST of CF810951 vs. TrEMBL
Match: D6N3G9|D6N3G9_GOSHI (U2 small nuclear ribonucleoprotein A OS=Gossypium hirsutum PE=2 SV=1)

HSP 1 Score: 211.846 bits (538), Expect = 1.223e-56
Identity = 108/153 (70.59%), Postives = 118/153 (77.12%), Query Frame = 2 
Query:   41 MVRLTADLIWKSPHFFNAIRERELDLRGNKIPVIENLGATEDQFDSIDLSDNEIVKLENFPYLNRLGTLXXXXXXXXXXXXXXGEFLPKXXXXXXXXXXXXXXVEIDPLASLTKLQYLSLLDNNITKRPNYRLYVIHKLKSLRLLDFKKSETK 499
            MV+LTADLIWK PHFFNA++ERELDLRGNKI VIENLGATEDQFD+IDLSDNEIVKL+NFPYL RLGTL              GEFLP               VEIDPL+SL KLQ+LSLLDNNITK+PNYRLYVIHKLKSLR+LDFKK + K
Sbjct:    1 MVKLTADLIWKCPHFFNALKERELDLRGNKIAVIENLGATEDQFDTIDLSDNEIVKLDNFPYLKRLGTLLINNNRVTRINPNIGEFLPNLHTLVLTNNRLVNLVEIDPLSSLPKLQFLSLLDNNITKKPNYRLYVIHKLKSLRVLDFKKVKAK 153

HSP 2 Score: 32.7278 bits (73), Expect = 1.223e-56
Identity = 14/21 (66.67%), Postives = 19/21 (90.48%), Query Frame = 3 
Query:  483 RKVKQKERIEAQKLFSSQEAE 545
            +KVK KER+EA+ LF+S+EAE
Sbjct:  148 KKVKAKERLEAENLFASKEAE 168
[Close]
BLAST of CF810951 vs. TrEMBL
Match: D7KJT8|D7KJT8_ARALY (U2 small nuclear ribonucleoprotein A OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_471077 PE=4 SV=1)

HSP 1 Score: 222.246 bits (565), Expect = 1.695e-56
Identity = 116/166 (69.88%), Postives = 127/166 (76.51%), Query Frame = 2 
Query:   41 MVRLTADLIWKSPHFFNAIRERELDLRGNKIPVIENLGATEDQFDSIDLSDNEIVKLENFPYLNRLGTLXXXXXXXXXXXXXXGEFLPKXXXXXXXXXXXXXXVEIDPLASLTKLQYLSLLDNNITKRPNYRLYVIHKLKSLRLLDFKKSETKGENRSTKAIFIAR 538
            MV+LTADLIWKSPHFFNAI+ERELDLRGNKIPVIENLGATEDQFD+IDLSDNEIVKLENFPYLNRLGTL              GEFLPK              VEIDPLAS+ KLQYL+LLDNNITK+PNYRLYVIHKLKSLR+LDF K + K E     A+F ++
Sbjct:    1 MVKLTADLIWKSPHFFNAIKERELDLRGNKIPVIENLGATEDQFDTIDLSDNEIVKLENFPYLNRLGTLLINNNRITRINPNLGEFLPKLHSLVLTNNRLVNLVEIDPLASIPKLQYLTLLDNNITKKPNYRLYVIHKLKSLRVLDFIKIKAK-ERAEAAALFSSK 165
[Close]
BLAST of CF810951 vs. TrEMBL
Match: C5WSV0|C5WSV0_SORBI (Putative uncharacterized protein Sb01g001040 OS=Sorghum bicolor GN=Sb01g001040 PE=4 SV=1)

HSP 1 Score: 213.386 bits (542), Expect = 4.608e-56
Identity = 110/149 (73.83%), Postives = 116/149 (77.85%), Query Frame = 2 
Query:   41 MVRLTADLIWKSPHFFNAIRERELDLRGNKIPVIENLGATEDQFDSIDLSDNEIVKLENFPYLNRLGTLXXXXXXXXXXXXXXGEFLPKXXXXXXXXXXXXXXVEIDPLASLTKLQYLSLLDNNITKRPNYRLYVIHKLKSLRLLDFKK 487
            MVRLTADLIWKSPHFFNAI+ERELDLRGNKI VIENLGATEDQFD+IDLSDNEIVKLENFPYLNRLGTL              GEFLPK               EIDPLASL KLQ+LSLLDN +TK+P+YRLYVIHKLK LRLLDFKK
Sbjct:    1 MVRLTADLIWKSPHFFNAIKERELDLRGNKIAVIENLGATEDQFDTIDLSDNEIVKLENFPYLNRLGTLLVNNNRITRINPNLGEFLPKLHTLVLTNNRLTNLAEIDPLASLPKLQFLSLLDNTVTKQPDYRLYVIHKLKHLRLLDFKK 149

HSP 2 Score: 29.261 bits (64), Expect = 4.608e-56
Identity = 13/21 (61.90%), Postives = 17/21 (80.95%), Query Frame = 3 
Query:  483 RKVKQKERIEAQKLFSSQEAE 545
            +KVKQ+ER+ A K F S+EAE
Sbjct:  148 KKVKQQERVAAAKKFHSKEAE 168
[Close]
BLAST of CF810951 vs. TrEMBL
Match: Q6EUK2|Q6EUK2_ORYSJ (Os02g0234800 protein OS=Oryza sativa subsp. japonica GN=OJ1145_E05.10 PE=2 SV=1)

HSP 1 Score: 213.772 bits (543), Expect = 7.831e-56
Identity = 107/149 (71.81%), Postives = 117/149 (78.52%), Query Frame = 2 
Query:   41 MVRLTADLIWKSPHFFNAIRERELDLRGNKIPVIENLGATEDQFDSIDLSDNEIVKLENFPYLNRLGTLXXXXXXXXXXXXXXGEFLPKXXXXXXXXXXXXXXVEIDPLASLTKLQYLSLLDNNITKRPNYRLYVIHKLKSLRLLDFKK 487
            MVRLTADLIWKSPHFFNA+++RELD+RGNKIP+IENLGATEDQFD+IDLSDNEIVKLENFPYLNRLGTL              GEFLPK               EIDPLASL KLQ+LSLLDN +TK+P+YRLYVIHKLK LRLLDFKK
Sbjct:    1 MVRLTADLIWKSPHFFNAVKDRELDIRGNKIPIIENLGATEDQFDTIDLSDNEIVKLENFPYLNRLGTLLVNNNRITRINPNLGEFLPKLHTLVLTNNRLTNLAEIDPLASLPKLQFLSLLDNTVTKQPDYRLYVIHKLKHLRLLDFKK 149

HSP 2 Score: 28.1054 bits (61), Expect = 7.831e-56
Identity = 13/21 (61.90%), Postives = 17/21 (80.95%), Query Frame = 3 
Query:  483 RKVKQKERIEAQKLFSSQEAE 545
            +KVKQ+ERI A + F S+EAE
Sbjct:  148 KKVKQQERIAAAQKFHSKEAE 168
[Close]
BLAST of CF810951 vs. TrEMBL
Match: B8AEK8|B8AEK8_ORYSI (Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_06481 PE=4 SV=1)

HSP 1 Score: 213.772 bits (543), Expect = 7.831e-56
Identity = 107/149 (71.81%), Postives = 117/149 (78.52%), Query Frame = 2 
Query:   41 MVRLTADLIWKSPHFFNAIRERELDLRGNKIPVIENLGATEDQFDSIDLSDNEIVKLENFPYLNRLGTLXXXXXXXXXXXXXXGEFLPKXXXXXXXXXXXXXXVEIDPLASLTKLQYLSLLDNNITKRPNYRLYVIHKLKSLRLLDFKK 487
            MVRLTADLIWKSPHFFNA+++RELD+RGNKIP+IENLGATEDQFD+IDLSDNEIVKLENFPYLNRLGTL              GEFLPK               EIDPLASL KLQ+LSLLDN +TK+P+YRLYVIHKLK LRLLDFKK
Sbjct:    1 MVRLTADLIWKSPHFFNAVKDRELDIRGNKIPIIENLGATEDQFDTIDLSDNEIVKLENFPYLNRLGTLLVNNNRITRINPNLGEFLPKLHTLVLTNNRLTNLAEIDPLASLPKLQFLSLLDNTVTKQPDYRLYVIHKLKHLRLLDFKK 149

HSP 2 Score: 28.1054 bits (61), Expect = 7.831e-56
Identity = 13/21 (61.90%), Postives = 17/21 (80.95%), Query Frame = 3 
Query:  483 RKVKQKERIEAQKLFSSQEAE 545
            +KVKQ+ERI A + F S+EAE
Sbjct:  148 KKVKQQERIAAAQKFHSKEAE 168
[Close]
BLAST of CF810951 vs. TrEMBL
Match: B6TS72|B6TS72_MAIZE (U2 small nuclear ribonucleoprotein A OS=Zea mays PE=2 SV=1)

HSP 1 Score: 211.846 bits (538), Expect = 1.331e-55
Identity = 108/149 (72.48%), Postives = 116/149 (77.85%), Query Frame = 2 
Query:   41 MVRLTADLIWKSPHFFNAIRERELDLRGNKIPVIENLGATEDQFDSIDLSDNEIVKLENFPYLNRLGTLXXXXXXXXXXXXXXGEFLPKXXXXXXXXXXXXXXVEIDPLASLTKLQYLSLLDNNITKRPNYRLYVIHKLKSLRLLDFKK 487
            MVRLTADLIWKSPHFFNA++ERELDLRGNKI VIEN+GATEDQFD+IDLSDNEIVKLENFPYLNRLGTL              GEFLPK               EIDPLASL KLQ+LSLLDN +TK+P+YRLYVIHKLK LRLLDFKK
Sbjct:    1 MVRLTADLIWKSPHFFNAVKERELDLRGNKIAVIENVGATEDQFDTIDLSDNEIVKLENFPYLNRLGTLLVNNNRITRINPNLGEFLPKLHTLVLTNNRLTNLAEIDPLASLPKLQFLSLLDNTVTKQPDYRLYVIHKLKHLRLLDFKK 149

HSP 2 Score: 29.261 bits (64), Expect = 1.331e-55
Identity = 13/21 (61.90%), Postives = 17/21 (80.95%), Query Frame = 3 
Query:  483 RKVKQKERIEAQKLFSSQEAE 545
            +KVKQ+ER+ A K F S+EAE
Sbjct:  148 KKVKQQERVAAAKKFHSKEAE 168
[Close]
BLAST of CF810951 vs. TrEMBL
Match: B9RG43|B9RG43_RICCO (U2 small nuclear ribonucleoprotein A, putative OS=Ricinus communis GN=RCOM_1439000 PE=4 SV=1)

HSP 1 Score: 219.164 bits (557), Expect = 1.434e-55
Identity = 114/166 (68.67%), Postives = 127/166 (76.51%), Query Frame = 2 
Query:   41 MVRLTADLIWKSPHFFNAIRERELDLRGNKIPVIENLGATEDQFDSIDLSDNEIVKLENFPYLNRLGTLXXXXXXXXXXXXXXGEFLPKXXXXXXXXXXXXXXVEIDPLASLTKLQYLSLLDNNITKRPNYRLYVIHKLKSLRLLDFKKSETKGENRSTKAIFIAR 538
            MVRLTADLIWKSPHFFNAI+ERELDLRGNKIPVIENLGATEDQFD+IDLSDNEIVKLEN PYL RLGTL              GEFLPK              VEIDPLASL KLQ+LSLLDN+ITK+PNYRLY+IHKLKSLR+LDFKK ++K E    + +F ++
Sbjct:    1 MVRLTADLIWKSPHFFNAIKERELDLRGNKIPVIENLGATEDQFDTIDLSDNEIVKLENMPYLTRLGTLLINNNRITRINPNIGEFLPKLHTLVLTNNRLVNLVEIDPLASLPKLQFLSLLDNSITKKPNYRLYIIHKLKSLRVLDFKKVKSK-ERMEAENLFASK 165
[Close]
BLAST of CF810951 vs. Vitis vinifera peptide
Match: GSVIVT01001138001 (assembled CDS)

HSP 1 Score: 215.312 bits (547), Expect = 1.399e-59
Identity = 110/153 (71.90%), Postives = 118/153 (77.12%), Query Frame = 2 
Query:   41 MVRLTADLIWKSPHFFNAIRERELDLRGNKIPVIENLGATEDQFDSIDLSDNEIVKLENFPYLNRLGTLXXXXXXXXXXXXXXGEFLPKXXXXXXXXXXXXXXVEIDPLASLTKLQYLSLLDNNITKRPNYRLYVIHKLKSLRLLDFKKSETK 499
            MVRLTADLIWKSPHFFNAIRERELDLRGNK+ VIENLGATEDQFD+IDLSDNEIVKLEN PYLNRLGTL              GE+LPK               EIDPL+S  KLQ+LSLLDNNITK+PNYRLYVIH+LKSLRLLDFKK + K
Sbjct:    1 MVRLTADLIWKSPHFFNAIRERELDLRGNKVAVIENLGATEDQFDTIDLSDNEIVKLENLPYLNRLGTLLINNNRITRINPNIGEYLPKLHTLVLTNNRLVNLAEIDPLSSFPKLQFLSLLDNNITKKPNYRLYVIHRLKSLRLLDFKKVKNK 153

HSP 2 Score: 31.5722 bits (70), Expect = 1.399e-59
Identity = 13/21 (61.90%), Postives = 18/21 (85.71%), Query Frame = 3 
Query:  483 RKVKQKERIEAQKLFSSQEAE 545
            +KVK KER+EA+ LF+S+E E
Sbjct:  148 KKVKNKERLEAENLFASKEVE 168
[Close]
BLAST of CF810951 vs. TAIR peptide
Match: AT1G09760.1 (| Symbols: U2A' | U2 small nuclear ribonucleoprotein A | chr1:3159476-3161603 REVERSE LENGTH=249)

HSP 1 Score: 219.164 bits (557), Expect = 1.155e-57
Identity = 115/166 (69.28%), Postives = 126/166 (75.90%), Query Frame = 2 
Query:   41 MVRLTADLIWKSPHFFNAIRERELDLRGNKIPVIENLGATEDQFDSIDLSDNEIVKLENFPYLNRLGTLXXXXXXXXXXXXXXGEFLPKXXXXXXXXXXXXXXVEIDPLASLTKLQYLSLLDNNITKRPNYRLYVIHKLKSLRLLDFKKSETKGENRSTKAIFIAR 538
            MV+LTADLIWKSPHFFNAI+ERELDLRGNKIPVIENLGATEDQFD+IDLSDNEIVKLENFPYLNRLGTL              GEFLPK              VEIDPLAS+ KLQYLSLLDNNITK+ NYRLYVIHKLKSLR+LDF K + K E     ++F ++
Sbjct:    1 MVKLTADLIWKSPHFFNAIKERELDLRGNKIPVIENLGATEDQFDTIDLSDNEIVKLENFPYLNRLGTLLINNNRITRINPNLGEFLPKLHSLVLTNNRLVNLVEIDPLASIPKLQYLSLLDNNITKKANYRLYVIHKLKSLRVLDFIKIKAK-ERAEAASLFSSK 165
The following BLAST results are available for this feature:
BLAST of CF810951 vs. DB:swissprot:display
Analysis Date: 2011-01-18 (BLAST: Vaccinium corymbosum unigene v1 vs Swissprot)
Total hits: 10
Match NameE-valueIdentityDescription
RU2A_ARATH1.069e-5669.28U2 small nuclear ribonucleoprotein A' OS=Arabidops... [more]
RU2A_MOUSE4.831e-3348.13U2 small nuclear ribonucleoprotein A' OS=Mus muscu... [more]
RU2A_MACFA4.831e-3348.13U2 small nuclear ribonucleoprotein A' OS=Macaca fa... [more]
RU2A_HUMAN4.831e-3348.13U2 small nuclear ribonucleoprotein A' OS=Homo sapi... [more]
RU2A_DROME1.328e-2945.10Probable U2 small nuclear ribonucleoprotein A' OS=... [more]
RU2A_CAEEL2.481e-2940.72Probable U2 small nuclear ribonucleoprotein A' OS=... [more]
RU2A_ASPFU8.260e-2538.27U2 small nuclear ribonucleoprotein A' OS=Aspergill... [more]
RU2A_SCHPO1.722e-2237.84U2 small nuclear ribonucleoprotein A' OS=Schizosac... [more]
RU2A_USTMA1.116e-2137.58U2 small nuclear ribonucleoprotein A' OS=Ustilago ... [more]
RU2A_NEUCR2.574e-1834.57U2 small nuclear ribonucleoprotein A' OS=Neurospor... [more]
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BLAST of CF810951 vs. Populus trichocarpa peptide v2.0
Analysis Date: 2011-01-18 (BLAST: Vaccinium corymbosum unigene v1 vs Populus trichocarpa v2.0 peptide)
Total hits: 2
Match NameE-valueIdentityDescription
POPTR_0381s00210.11.332e-5972.55[more]
POPTR_0001s12570.12.234e-5771.52[more]
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BLAST of CF810951 vs. P. persica 1.0 peptide
Analysis Date: 2011-01-18 (BLAST: Vaccinium corymbosum unigene v1 vs Ppersica v1.0 peptide)
Total hits: 1
Match NameE-valueIdentityDescription
ppa018334m3.537e-5768.07[more]
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BLAST of CF810951 vs. TrEMBL
Analysis Date: 2011-01-18 (BLAST: Vaccinium corymbosum unigene v1 vs TrEMBL)
Total hits: 10
Match NameE-valueIdentityDescription
B9GYT1|B9GYT1_POPTR1.465e-5772.55Predicted protein OS=Populus trichocarpa GN=POPTRD... [more]
D7TFN0|D7TFN0_VITVI2.490e-5771.90Whole genome shotgun sequence of line PN40024, sca... [more]
Q38M62|Q38M62_SOLTU2.614e-5773.13Putative uncharacterized protein OS=Solanum tubero... [more]
D6N3G9|D6N3G9_GOSHI1.223e-5670.59U2 small nuclear ribonucleoprotein A OS=Gossypium ... [more]
D7KJT8|D7KJT8_ARALY1.695e-5669.88U2 small nuclear ribonucleoprotein A OS=Arabidopsi... [more]
C5WSV0|C5WSV0_SORBI4.608e-5673.83Putative uncharacterized protein Sb01g001040 OS=So... [more]
Q6EUK2|Q6EUK2_ORYSJ7.831e-5671.81Os02g0234800 protein OS=Oryza sativa subsp. japoni... [more]
B8AEK8|B8AEK8_ORYSI7.831e-5671.81Putative uncharacterized protein OS=Oryza sativa s... [more]
B6TS72|B6TS72_MAIZE1.331e-5572.48U2 small nuclear ribonucleoprotein A OS=Zea mays P... [more]
B9RG43|B9RG43_RICCO1.434e-5568.67U2 small nuclear ribonucleoprotein A, putative OS=... [more]
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BLAST of CF810951 vs. Vitis vinifera peptide
Analysis Date: 2011-01-25 (BLAST: Vaccinium corymbosum unigene v1 vs Vitis vinifera peptide)
Total hits: 1
Match NameE-valueIdentityDescription
GSVIVT010011380011.399e-5971.90assembled CDS[more]
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BLAST of CF810951 vs. TAIR peptide
Analysis Date: 2011-02-10 (BLAST: Vaccinium corymbosum unigene v1 vs TAIR 10 peptide)
Total hits: 1
Match NameE-valueIdentityDescription
AT1G09760.11.155e-5769.28| Symbols: U2A' | U2 small nuclear ribonucleoprote... [more]
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InterPro
Analysis Name: InterProScan analysis for Vaccinium corymbosum unigene v1
Date Performed: 2011-01-18
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.80.10.10no descriptioncoord: 33..165
score: 1.5
NoneNo IPR availablePANTHERPTHR10552U2 SMALL NUCLEAR RIBONUCLEOPROTEIN Acoord: 16..162
score: 1.7
NoneNo IPR availablePROFILEPS51450LRRcoord: 33..54
score: 6.380coord: 56..77
score: 6.726coord: 78..99
score: 5.640coord: 102..123
score: 7.566coord: 127..148
score: 6
NoneNo IPR availableSEGsegsegcoord: 83..96
score: NAcoord: 103..116
score
NoneNo IPR availableSUPERFAMILY52058L domain-likecoord: 16..170
score: 1.9
NoneNo IPR availableSEGsegsegcoord: 1..13
score: NAcoord: 51..63
score

Properties
Property NameValue
Singlet in analysisVaccinium corymbosum unigene v1
Sequences
The following sequences are available for this feature:

EST sequence

>CF810951 ID=CF810951; Name=CF810951; organism=Vaccinium corymbosum; type=EST; length=547bp
GGCGTCCAAAGGCGCACACAGTGAGCGAAGAAGAAGAGAAATGGTGAGAT
TAACAGCGGACTTGATTTGGAAAAGCCCTCACTTCTTCAACGCCATTCGA
GAGCGCGAACTTGATCTTCGAGGGAATAAGATTCCTGTCATAGAAAACTT
GGGTGCCACTGAGGATCAATTTGACAGCATTGATTTGTCTGATAATGAGA
TAGTTAAGCTCGAAAATTTTCCTTACCTTAATCGGCTTGGCACTCTGATA
GTCAACAACAATAGAATTACCCGTATCAATCCGAACATTGGAGAATTTTT
GCCGAAATTGCATACGTTGGTTCTTACAAACAATCGACTAACTAACTTGG
TTGAGATTGATCCACTGGCGTCTCTTACGAAGCTGCAGTACCTTAGTCTT
CTTGACAATAATATTACCAAGAGGCCTAATTACCGCTTATATGTCATCCA
CAAACTGAAATCACTGCGCTTGCTGGACTTCAAGAAAAGTGAAACAAAAG
GAGAGAATCGAAGCACAAAAGCTATTTTCATCGCAAGAAGCTGAGGA
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Annotated Terms
The following terms have been associated with this EST:
Vocabulary: KEGG ORTHOLOGY
TermDefinition
K11092SNRPA1; U2 small nuclear ribonucleoprotein A'
Vocabulary: KEGG PATHWAY
TermDefinition
ko03020RNA polymerase
Vocabulary: INTERPRO
TermDefinition
noIPRunintegrated