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EST Overview
| Name | CF811493 |
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| Unique Name | CF811493 |
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| Type | EST |
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| Organism | Vaccinium corymbosum (northern highbush blueberry) |
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| Sequence length | 391 |
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Unigenes
This EST is part of the following unigenes:
Analyses
This EST is derived from or has results from the following analyses
InterPro
Analysis Name: InterProScan analysis for Vaccinium corymbosum unigene v1
Date Performed: 2011-01-18
| IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
|---|
| None | No IPR available | SEG | seg | seg | coord: 29..39
score: NAcoord: 47..52
score: NAcoord: 56..83
score |
| None | No IPR available | SEG | seg | seg | coord: 7..21
score: NAcoord: 47..74
score: NAcoord: 76..92
score |
| None | No IPR available | SEG | seg | seg | coord: 5..28
score: NAcoord: 35..45
score |
| None | No IPR available | SEG | seg | seg | coord: 4..10
score: NAcoord: 23..50
score: NAcoord: 76..90
score |
| None | No IPR available | SEG | seg | seg | coord: 11..27
score: NAcoord: 30..56
score: NAcoord: 62..77
score |
| IPR010800 | Glycine rich protein | PFAM | PF07172 | GRP | coord: 2..74
score: 9.2 |
Properties
| Property Name | Value |
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| Singlet in analysis | Vaccinium corymbosum unigene v1 |
Sequences
The
following sequences are available for this feature:
EST sequence >CF811493 ID=CF811493; Name=CF811493; organism=Vaccinium corymbosum; type=EST; length=391bp
AAGAAATGGGTTCAAAAGCAATTATTTTCCTTGCCCTTTTTCTGGCCACT
GTTCTTCTCGTTACCTCAGAGGTGGCAGCCAAGGATTTGGCTGAAACTTC
CACTACTACTGAACAGACTAATGGAGTAGGTGACGCCAAGTATGGTGGCG
GCCGTGGCGGTGGATACGGAGGTGGACATGGTGGAGGATATGGAGGAGGG
CATGGCGGCGGTGGATACGGAGGTGCGACATGGTGGAAGANGAGGAGNCG
NACAAGGTGGCNGATTCNTATTGANGANGAAGCAAATGANTGTTACNNNA
ANTAAGTGTCATAACAAGTATGATATGAATAATGGATGATATCCAATTAT
GCCCTTCACATTGANAACCATAACCTATNTCTTCTGTGAGG back to top
Annotated Terms
The
following terms have been associated with
this EST:
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