CV090223 | GDV

EST Overview


Name	CV090223
Unique Name	CV090223
Type	EST
Organism	Vaccinium corymbosum (northern highbush blueberry)
Sequence length	531

Libraries


Library Name	Type
LIBEST_014530 cDNA cold acclimated Bluecrop library	cdna_library

Unigenes

This EST is part of the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
	Vaccinium corymbosum unigene v1	EST

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
Vaccinium corymbosum unigene v1	2011-01-18
BLAST: Vaccinium corymbosum unigene v1 vs Populus trichocarpa v2.0 peptide	2011-01-18
BLAST: Vaccinium corymbosum unigene v1 vs Ppersica v1.0 peptide	2011-01-18
BLAST: Vaccinium corymbosum unigene v1 vs Swissprot	2011-01-18
BLAST: Vaccinium corymbosum unigene v1 vs TrEMBL	2011-01-18
BLAST: Vaccinium corymbosum unigene v1 vs Vitis vinifera peptide	2011-01-25
BLAST: Vaccinium corymbosum unigene v1 vs TAIR 10 peptide	2011-02-10
InterProScan analysis for Vaccinium corymbosum unigene v1	2011-01-18

Homology

[Close]

BLAST of CV090223 vs. DB:swissprot:display
Match: AS1_ARATH (Transcription factor AS1 OS=Arabidopsis thaliana GN=AS1 PE=1 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 1.015e-16
Identity = 37/66 (56.06%), Postives = 42/66 (63.64%), Query Frame = 2

Query:  239 KTISNPALRRDPLLKRNNCLVIRLQAXHGNXWKKIAAEVPGRTAXXLXXXWEVFXEKQLREHQEKN 436
            K    P +++  L +    LVIRLQ  HGN WKKIAAEVPGRTA  L   WEVF EKQ RE +E N
Sbjct:   50 KNYLKPGIKKGSLTEEEQRLVIRLQEKHGNKWKKIAAEVPGRTAKRLGKWWEVFKEKQQREEKESN 115

HSP 2 Score: 30.8018 bits (68), Expect = 1.015e-16
Identity = 14/21 (66.67%), Postives = 17/21 (80.95%), Query Frame = 3

Query:  459 LXDGXYDRILENFA*KLVKER 521
            + +  YDRILE+FA KLVKER
Sbjct:  121 IDESKYDRILESFAEKLVKER 141

HSP 3 Score: 73.559 bits (179), Expect = 6.878e-13
Identity = 40/68 (58.82%), Postives = 42/68 (61.76%), Query Frame = 1

Query:   88 MXEXHRWRPEEDALCARASLNNMDQGSGTSSHXXMNAPLXXXAQSCLERWKNYLKPGIKKGSLTEEEQ 291
            M E  RW  EEDAL  RA +              MN PL   A+SCLERWKNYLKPGIKKGSLTEEEQ
Sbjct:    1 MKERQRWSGEEDALL-RAYVRQFGPREWHLVSERMNKPLNRDAKSCLERWKNYLKPGIKKGSLTEEEQ 67

[Close]

BLAST of CV090223 vs. DB:swissprot:display
Match: RS2_MAIZE (Protein rough sheath 2 OS=Zea mays GN=RS2 PE=1 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 3.061e-15
Identity = 36/61 (59.02%), Postives = 40/61 (65.57%), Query Frame = 2

Query:  239 KTISNPALRRDPLLKRNNCLVIRLQAXHGNXWKKIAAEVPGRTAXXLXXXWEVFXEKQLRE 421
            K    P +++  L +    LVIRLQA HGN WKKIAAEVPGRTA  L   WEVF EKQ RE
Sbjct:   50 KNYLRPGIKKGSLTEEEQRLVIRLQAKHGNKWKKIAAEVPGRTAKRLGKWWEVFKEKQQRE 110

HSP 2 Score: 28.4906 bits (62), Expect = 3.061e-15
Identity = 13/19 (68.42%), Postives = 15/19 (78.95%), Query Frame = 3

Query:  468 GXYDRILENFA*KLVKERP 524
            G Y+ +LENFA KLV ERP
Sbjct:  127 GRYEWLLENFAEKLVGERP 145

HSP 3 Score: 73.9442 bits (180), Expect = 5.266e-13
Identity = 39/68 (57.35%), Postives = 43/68 (63.24%), Query Frame = 1

Query:   88 MXEXHRWRPEEDALCARASLNNMDQGSGTSSHXXMNAPLXXXAQSCLERWKNYLKPGIKKGSLTEEEQ 291
            M E  RWRPEEDA+  RA +              MN  L   A+SCLERWKNYL+PGIKKGSLTEEEQ
Sbjct:    1 MKERQRWRPEEDAVL-RAYVRQYGPREWHLVSQRMNVALDRDAKSCLERWKNYLRPGIKKGSLTEEEQ 67

[Close]

BLAST of CV090223 vs. DB:swissprot:display
Match: RS2_ORYSJ (Protein rough sheath 2 homolog OS=Oryza sativa subsp. japonica GN=RS2 PE=2 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 9.215e-14
Identity = 37/73 (50.68%), Postives = 45/73 (61.64%), Query Frame = 2

Query:  239 KTISNPALRRDPLLKRNNCLVIRLQAXHGNXWKKIAAEVPGRTAXXLXXXWEVFXEKQLREHQEKNXNLVVDP 457
            K    P +++  L      LVIRLQA HGN WKKIAAEVPGRTA  L   WEVF EKQ RE ++++   +  P
Sbjct:   55 KNYLRPGIKKGSLTDDEQRLVIRLQAKHGNKWKKIAAEVPGRTAKRLGKWWEVFKEKQQRELRDRDRRRLPPP 127

HSP 2 Score: 23.0978 bits (48), Expect = 9.215e-14
Identity = 10/17 (58.82%), Postives = 13/17 (76.47%), Query Frame = 3

Query:  468 GXYDRILENFA*KLVKE 518
            G YD +LE+FA KLV +
Sbjct:  138 GRYDWLLEDFADKLVND 154

HSP 3 Score: 73.559 bits (179), Expect = 6.878e-13
Identity = 37/68 (54.41%), Postives = 44/68 (64.71%), Query Frame = 1

Query:   88 MXEXHRWRPEEDALCARASLNNMDQGSGTSSHXXMNAPLXXXAQSCLERWKNYLKPGIKKGSLTEEEQ 291
            M E  RWRPEEDA+   A +        +     MN PL   A+SCLERWKNYL+PGIKKGSLT++EQ
Sbjct:    6 MRERQRWRPEEDAILL-AYVRQYGPREWSLVSQRMNRPLHRDAKSCLERWKNYLRPGIKKGSLTDDEQ 72

[Close]

BLAST of CV090223 vs. Populus trichocarpa peptide v2.0
Match: POPTR_0006s08610.1 ()

HSP 1 Score: 77.411 bits (189), Expect = 3.897e-20
Identity = 38/66 (57.58%), Postives = 43/66 (65.15%), Query Frame = 2

Query:  239 KTISNPALRRDPLLKRNNCLVIRLQAXHGNXWKKIAAEVPGRTAXXLXXXWEVFXEKQLREHQEKN 436
            K    P +++  L +    LVIRLQA HGN WKKIAAEVPGRTA  L   WEVF EKQ RE +E N
Sbjct:   50 KNYLKPGIKKGSLTEEEQSLVIRLQAKHGNKWKKIAAEVPGRTAKRLGKWWEVFKEKQQRELKENN 115

HSP 2 Score: 37.7354 bits (86), Expect = 3.897e-20
Identity = 17/24 (70.83%), Postives = 19/24 (79.17%), Query Frame = 3

Query:  459 LXDGXYDRILENFA*KLVKERPXP 530
            + +G YDRILE FA KLVKERP P
Sbjct:  121 IDEGKYDRILETFAEKLVKERPSP 144

HSP 3 Score: 77.0258 bits (188), Expect = 7.575e-15
Identity = 41/68 (60.29%), Postives = 43/68 (63.24%), Query Frame = 1

Query:   88 MXEXHRWRPEEDALCARASLNNMDQGSGTSSHXXMNAPLXXXAQSCLERWKNYLKPGIKKGSLTEEEQ 291
            M E  RWR EEDAL  RA +              MN PL   A+SCLERWKNYLKPGIKKGSLTEEEQ
Sbjct:    1 MKERQRWRAEEDALL-RAYVKQYGPREWNLVSQRMNTPLNRDAKSCLERWKNYLKPGIKKGSLTEEEQ 67

[Close]

BLAST of CV090223 vs. Populus trichocarpa peptide v2.0
Match: POPTR_0017s13950.1 ()

HSP 1 Score: 63.929 bits (154), Expect = 1.006e-11
Identity = 31/58 (53.45%), Postives = 36/58 (62.07%), Query Frame = 2

Query:  239 KTISNPALRRDPLLKRNNCLVIRLQAXHGNXWKKIAAEVPGRTAXXLXXXWEVFXEKQ 412
            K    P +++  L      LVI LQA +GN WKKIA+EVPGRTA  L   WEVF EKQ
Sbjct:   53 KNYLKPGIKKGCLTPEEQALVISLQAKYGNKWKKIASEVPGRTAKRLSKWWEVFKEKQ 110

HSP 2 Score: 22.7126 bits (47), Expect = 1.006e-11
Identity = 10/18 (55.56%), Postives = 12/18 (66.67%), Query Frame = 3

Query:  468 GXYDRILENFA*KLVKER 521
            G YD ILE FA K V+ +
Sbjct:  147 GKYDHILETFAEKYVQPK 164

HSP 3 Score: 60.8474 bits (146), Expect = 5.618e-10
Identity = 35/71 (49.30%), Postives = 40/71 (56.34%), Query Frame = 1

Query:   88 MXEXHRWRPEEDALCARASLNNMDQGSGTSSHXXMNAP---LXXXAQSCLERWKNYLKPGIKKGSLTEEEQ 291
            M E  RW+PEEDA+  RA +              + A    L    +SCLERWKNYLKPGIKKG LT EEQ
Sbjct:    1 MKERQRWQPEEDAIL-RAYVKQYGPKEWNLISQRVEASGKTLNRDPKSCLERWKNYLKPGIKKGCLTPEEQ 70

[Close]

BLAST of CV090223 vs. Populus trichocarpa peptide v2.0
Match: POPTR_0004s10250.1 ()

HSP 1 Score: 62.003 bits (149), Expect = 3.701e-11
Identity = 29/58 (50.00%), Postives = 36/58 (62.07%), Query Frame = 2

Query:  239 KTISNPALRRDPLLKRNNCLVIRLQAXHGNXWKKIAAEVPGRTAXXLXXXWEVFXEKQ 412
            K    P +++  L+     LVI LQA +GN WK IA+EVPGRTA  L   WEVF E+Q
Sbjct:   53 KNYLKPGIKKGSLIPEEQTLVISLQAKYGNKWKTIASEVPGRTAKRLSKWWEVFKERQ 110

HSP 2 Score: 22.7126 bits (47), Expect = 3.701e-11
Identity = 10/18 (55.56%), Postives = 12/18 (66.67%), Query Frame = 3

Query:  468 GXYDRILENFA*KLVKER 521
            G YD ILE FA K V+ +
Sbjct:  149 GNYDHILETFAEKYVQPK 166

HSP 3 Score: 60.077 bits (144), Expect = 9.583e-10
Identity = 35/71 (49.30%), Postives = 40/71 (56.34%), Query Frame = 1

Query:   88 MXEXHRWRPEEDALCARASLNNMDQGSGTSSHXXMNAP---LXXXAQSCLERWKNYLKPGIKKGSLTEEEQ 291
            M E  RW+PEEDA+  RA +              + A    L    +SCLERWKNYLKPGIKKGSL  EEQ
Sbjct:    1 MKERQRWQPEEDAVL-RAYVKQYGPKEWNLISQRVEATGKTLNRDPKSCLERWKNYLKPGIKKGSLIPEEQ 70

[Close]

BLAST of CV090223 vs. Populus trichocarpa peptide v2.0
Match: POPTR_0013s14480.1 ()

HSP 1 Score: 45.0542 bits (105), Expect = 6.447e-10
Identity = 27/63 (42.86%), Postives = 32/63 (50.79%), Query Frame = 1

Query:  106 WRPEEDA-LCARASLNNMDQGSGTSSHXXMNAPLXXXAQSCLERWKNYLKPGIKKGSLTEEEQ 291
            W PEED  L A   L    QG G       NA L    +SC  RW NYL+P IK+G  + EE+
Sbjct:   17 WTPEEDQKLTAYIQL----QGPGNWRSLPKNAGLQRCGKSCRLRWTNYLRPDIKRGRFSFEEE 75

HSP 2 Score: 35.4242 bits (80), Expect = 6.447e-10
Identity = 15/39 (38.46%), Postives = 21/39 (53.85%), Query Frame = 2

Query:  299 VIRLQAXHGNXWKKIAAEVPGRTAXXLXXXWEVFXEKQL 415
            +I+L +  GN W  IAA +PGRT   +   W     K+L
Sbjct:   78 IIQLHSILGNKWSAIAARLPGRTDNEIKNYWNTHIRKRL 116

[Close]

BLAST of CV090223 vs. Populus trichocarpa peptide v2.0
Match: POPTR_0006s12530.1 ()

HSP 1 Score: 40.0466 bits (92), Expect = 1.939e-7
Identity = 23/64 (35.94%), Postives = 30/64 (46.88%), Query Frame = 1

Query:  106 WRPEEDALCARASLNNMDQGSGTSSHXX---MNAPLXXXAQSCLERWKNYLKPGIKKGSLTEEE 288
            W PEEDA      L    +  GT  +       A L    +SC  RW NYL+P IK G  +++E
Sbjct:   17 WSPEEDA-----KLKEYLEKQGTGGNWIALPQKAGLKRCGKSCRLRWLNYLRPNIKHGEFSDDE 75

HSP 2 Score: 31.9574 bits (71), Expect = 1.939e-7
Identity = 14/40 (35.00%), Postives = 22/40 (55.00%), Query Frame = 2

Query:  296 LVIRLQAXHGNXWKKIAAEVPGRTAXXLXXXWEVFXEKQL 415
            ++  L A  G+ W  IAA++PGRT   +   W    +K+L
Sbjct:   78 IICSLYANIGSRWSIIAAQLPGRTDNDIKNYWNTKLKKKL 117

[Close]

BLAST of CV090223 vs. P. persica 1.0 peptide
Match: ppa007753m ()

HSP 1 Score: 73.559 bits (179), Expect = 1.159e-17
Identity = 41/73 (56.16%), Postives = 46/73 (63.01%), Query Frame = 2

Query:  239 KTISNPALRRDPLLKRNNCLVIRLQAXHGNXWKKIAAEVPGRTAXXLXXXWEVFXEKQLREHQEKNXNLVVDP 457
            K    P +++  L +    LVI LQA HGN WKKIAAEVPGRTA  L   WEVF EKQ RE  +KN N  VDP
Sbjct:   52 KNYLKPGIKKGSLTEEEQRLVICLQAKHGNKWKKIAAEVPGRTAKRLGKWWEVFKEKQQRE--QKN-NKTVDP 121

HSP 2 Score: 32.7278 bits (73), Expect = 1.159e-17
Identity = 15/22 (68.18%), Postives = 17/22 (77.27%), Query Frame = 3

Query:  465 DGXYDRILENFA*KLVKERPXP 530
            +G YDRILE FA KLV+ER  P
Sbjct:  124 EGKYDRILETFAEKLVQERAAP 145

HSP 3 Score: 78.5666 bits (192), Expect = 1.881e-15
Identity = 42/70 (60.00%), Postives = 44/70 (62.86%), Query Frame = 1

Query:   82 MXMXEXHRWRPEEDALCARASLNNMDQGSGTSSHXXMNAPLXXXAQSCLERWKNYLKPGIKKGSLTEEEQ 291
            M M E  RWR EEDAL  RA +              MN PL   A+SCLERWKNYLKPGIKKGSLTEEEQ
Sbjct:    1 MEMKERQRWRAEEDALL-RAYVQQYGPREWNLVSQRMNTPLNRDAKSCLERWKNYLKPGIKKGSLTEEEQ 69

[Close]

BLAST of CV090223 vs. TrEMBL
Match: D7THN5|D7THN5_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_7.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00034166001 PE=4 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 4.973e-19
Identity = 42/73 (57.53%), Postives = 47/73 (64.38%), Query Frame = 2

Query:  239 KTISNPALRRDPLLKRNNCLVIRLQAXHGNXWKKIAAEVPGRTAXXLXXXWEVFXEKQLREHQEKNXNLVVDP 457
            K    P +++  L +    LVIRLQA HGN WKKIAAEVPGRTA  L   WEVF EKQ RE +E N   VVDP
Sbjct:   50 KNYLRPGIKKGSLTEEEQRLVIRLQAKHGNKWKKIAAEVPGRTAKRLGKWWEVFKEKQQREQKENNK--VVDP 120

HSP 2 Score: 37.7354 bits (86), Expect = 4.973e-19
Identity = 17/24 (70.83%), Postives = 19/24 (79.17%), Query Frame = 3

Query:  459 LXDGXYDRILENFA*KLVKERPXP 530
            + +G YDRILE FA KLVKERP P
Sbjct:  121 IEEGKYDRILETFAEKLVKERPAP 144

HSP 3 Score: 75.8702 bits (185), Expect = 1.780e-12
Identity = 40/68 (58.82%), Postives = 43/68 (63.24%), Query Frame = 1

Query:   88 MXEXHRWRPEEDALCARASLNNMDQGSGTSSHXXMNAPLXXXAQSCLERWKNYLKPGIKKGSLTEEEQ 291
            M E  RWR EEDAL  RA +              MN PL   A+SCLERWKNYL+PGIKKGSLTEEEQ
Sbjct:    1 MKERQRWRAEEDALL-RAYVRQYGPREWNLVSQRMNTPLGRDAKSCLERWKNYLRPGIKKGSLTEEEQ 67

[Close]

BLAST of CV090223 vs. TrEMBL
Match: B9SYB2|B9SYB2_RICCO (Asymmetric leaves1 and rough sheath, putative OS=Ricinus communis GN=RCOM_0760730 PE=4 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 1.845e-18
Identity = 38/66 (57.58%), Postives = 44/66 (66.67%), Query Frame = 2

Query:  239 KTISNPALRRDPLLKRNNCLVIRLQAXHGNXWKKIAAEVPGRTAXXLXXXWEVFXEKQLREHQEKN 436
            K    P +++  L +    LVIRLQA HGN WKKIAAEVPGRTA  L   WEVF +KQ RE +EKN
Sbjct:   50 KNYLKPGIKKGSLTEEEQRLVIRLQAKHGNKWKKIAAEVPGRTAKRLGKWWEVFKDKQQREQKEKN 115

HSP 2 Score: 37.7354 bits (86), Expect = 1.845e-18
Identity = 17/24 (70.83%), Postives = 19/24 (79.17%), Query Frame = 3

Query:  459 LXDGXYDRILENFA*KLVKERPXP 530
            + +G YDRILE FA KLVKERP P
Sbjct:  121 IEEGKYDRILETFAEKLVKERPTP 144

HSP 3 Score: 77.0258 bits (188), Expect = 7.989e-13
Identity = 41/68 (60.29%), Postives = 43/68 (63.24%), Query Frame = 1

Query:   88 MXEXHRWRPEEDALCARASLNNMDQGSGTSSHXXMNAPLXXXAQSCLERWKNYLKPGIKKGSLTEEEQ 291
            M E  RWR EEDAL  RA +              MN PL   A+SCLERWKNYLKPGIKKGSLTEEEQ
Sbjct:    1 MKERQRWRAEEDALL-RAYVKQYGPREWNLVSQRMNTPLNRDAKSCLERWKNYLKPGIKKGSLTEEEQ 67

[Close]

BLAST of CV090223 vs. TrEMBL
Match: B9T4X8|B9T4X8_RICCO (Asymmetric leaves1 and rough sheath, putative OS=Ricinus communis GN=RCOM_0283740 PE=4 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 3.123e-18
Identity = 38/66 (57.58%), Postives = 43/66 (65.15%), Query Frame = 2

Query:  239 KTISNPALRRDPLLKRNNCLVIRLQAXHGNXWKKIAAEVPGRTAXXLXXXWEVFXEKQLREHQEKN 436
            K    P +++  L +    LVIRLQA HGN WKKIAAEVPGRTA  L   WEVF EKQ RE +E N
Sbjct:   50 KNYLKPGIKKGSLTEEEQRLVIRLQAKHGNKWKKIAAEVPGRTAKRLGKWWEVFKEKQQREQKENN 115

HSP 2 Score: 37.7354 bits (86), Expect = 3.123e-18
Identity = 17/24 (70.83%), Postives = 19/24 (79.17%), Query Frame = 3

Query:  459 LXDGXYDRILENFA*KLVKERPXP 530
            + +G YDRILE FA KLVKERP P
Sbjct:  121 IEEGKYDRILETFAEKLVKERPAP 144

HSP 3 Score: 77.0258 bits (188), Expect = 7.989e-13
Identity = 41/68 (60.29%), Postives = 43/68 (63.24%), Query Frame = 1

Query:   88 MXEXHRWRPEEDALCARASLNNMDQGSGTSSHXXMNAPLXXXAQSCLERWKNYLKPGIKKGSLTEEEQ 291
            M E  RWR EEDAL  RA +              MN PL   A+SCLERWKNYLKPGIKKGSLTEEEQ
Sbjct:    1 MKERQRWRAEEDALL-RAYVKQYGPREWNLVSQRMNTPLNRDAKSCLERWKNYLKPGIKKGSLTEEEQ 67

[Close]

BLAST of CV090223 vs. TrEMBL
Match: B9HBM2|B9HBM2_POPTR (Predicted protein OS=Populus trichocarpa GN=MYB224 PE=4 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 4.055e-18
Identity = 38/66 (57.58%), Postives = 43/66 (65.15%), Query Frame = 2

Query:  239 KTISNPALRRDPLLKRNNCLVIRLQAXHGNXWKKIAAEVPGRTAXXLXXXWEVFXEKQLREHQEKN 436
            K    P +++  L +    LVIRLQA HGN WKKIAAEVPGRTA  L   WEVF EKQ RE +E N
Sbjct:   50 KNYLKPGIKKGSLTEEEQSLVIRLQAKHGNKWKKIAAEVPGRTAKRLGKWWEVFKEKQQRELKENN 115

HSP 2 Score: 37.7354 bits (86), Expect = 4.055e-18
Identity = 17/24 (70.83%), Postives = 19/24 (79.17%), Query Frame = 3

Query:  459 LXDGXYDRILENFA*KLVKERPXP 530
            + +G YDRILE FA KLVKERP P
Sbjct:  121 IDEGKYDRILETFAEKLVKERPSP 144

HSP 3 Score: 77.0258 bits (188), Expect = 7.989e-13
Identity = 41/68 (60.29%), Postives = 43/68 (63.24%), Query Frame = 1

Query:   88 MXEXHRWRPEEDALCARASLNNMDQGSGTSSHXXMNAPLXXXAQSCLERWKNYLKPGIKKGSLTEEEQ 291
            M E  RWR EEDAL  RA +              MN PL   A+SCLERWKNYLKPGIKKGSLTEEEQ
Sbjct:    1 MKERQRWRAEEDALL-RAYVKQYGPREWNLVSQRMNTPLNRDAKSCLERWKNYLKPGIKKGSLTEEEQ 67

[Close]

BLAST of CV090223 vs. TrEMBL
Match: D1LXI9|D1LXI9_9ROSI (Myb family transcription factor OS=Castanea mollissima PE=2 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 8.925e-18
Identity = 38/66 (57.58%), Postives = 43/66 (65.15%), Query Frame = 2

Query:  239 KTISNPALRRDPLLKRNNCLVIRLQAXHGNXWKKIAAEVPGRTAXXLXXXWEVFXEKQLREHQEKN 436
            K    P +++  L +    LVIRLQA HGN WKKIAAEVPGRTA  L   WEVF EKQ RE +E N
Sbjct:   50 KNYLKPGIKKGSLTEEEQRLVIRLQAKHGNKWKKIAAEVPGRTAKRLGKWWEVFKEKQQREQKENN 115

HSP 2 Score: 36.1946 bits (82), Expect = 8.925e-18
Identity = 17/24 (70.83%), Postives = 18/24 (75.00%), Query Frame = 3

Query:  459 LXDGXYDRILENFA*KLVKERPXP 530
            + DG YDRILE FA KLVKER  P
Sbjct:  121 IEDGKYDRILETFAEKLVKERKAP 144

HSP 3 Score: 73.9442 bits (180), Expect = 6.763e-12
Identity = 40/68 (58.82%), Postives = 42/68 (61.76%), Query Frame = 1

Query:   88 MXEXHRWRPEEDALCARASLNNMDQGSGTSSHXXMNAPLXXXAQSCLERWKNYLKPGIKKGSLTEEEQ 291
            M E  RWR EEDAL  RA +              MN  L   A+SCLERWKNYLKPGIKKGSLTEEEQ
Sbjct:    1 MKERQRWRSEEDALL-RAYVKQYGPREWNLVSQRMNTTLNRDAKSCLERWKNYLKPGIKKGSLTEEEQ 67

[Close]

BLAST of CV090223 vs. TrEMBL
Match: Q84NB7|Q84NB7_ESCCA (Phantastica-like MYB protein OS=Eschscholzia californica subsp. californica GN=Phan PE=2 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 2.551e-17
Identity = 39/73 (53.42%), Postives = 46/73 (63.01%), Query Frame = 2

Query:  239 KTISNPALRRDPLLKRNNCLVIRLQAXHGNXWKKIAAEVPGRTAXXLXXXWEVFXEKQLREHQEKNXNLVVDP 457
            K    P +++  L +    LVIRLQA HGN WKKIAAEVPGRTA  L   WEVF EKQ RE  +K  +  +DP
Sbjct:   50 KNYLKPGIKKGSLTEEEQRLVIRLQAKHGNKWKKIAAEVPGRTAKRLGKWWEVFKEKQQRE--QKETSKTIDP 120

HSP 2 Score: 36.1946 bits (82), Expect = 2.551e-17
Identity = 16/24 (66.67%), Postives = 19/24 (79.17%), Query Frame = 3

Query:  459 LXDGXYDRILENFA*KLVKERPXP 530
            + +G YD+ILE FA KLVKERP P
Sbjct:  121 IEEGKYDQILETFAEKLVKERPNP 144

HSP 3 Score: 73.559 bits (179), Expect = 8.833e-12
Identity = 40/68 (58.82%), Postives = 42/68 (61.76%), Query Frame = 1

Query:   88 MXEXHRWRPEEDALCARASLNNMDQGSGTSSHXXMNAPLXXXAQSCLERWKNYLKPGIKKGSLTEEEQ 291
            M E  RWR EEDAL  RA +              MN  L   A+SCLERWKNYLKPGIKKGSLTEEEQ
Sbjct:    1 MKERQRWRAEEDALL-RAYVKQYGPREWNLVSQRMNTHLDRDAKSCLERWKNYLKPGIKKGSLTEEEQ 67

[Close]

BLAST of CV090223 vs. TrEMBL
Match: Q6Q504|Q6Q504_TOBAC (Phantastica OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 1.602e-16
Identity = 41/73 (56.16%), Postives = 46/73 (63.01%), Query Frame = 2

Query:  239 KTISNPALRRDPLLKRNNCLVIRLQAXHGNXWKKIAAEVPGRTAXXLXXXWEVFXEKQLREHQEKNXNLVVDP 457
            K    P +++  L +    LVI LQA HGN WKKIAAEVPGRTA  L   WEVF EKQ RE +E N   VVDP
Sbjct:   50 KNYLKPGIKKGSLTQEEQRLVIHLQAKHGNKWKKIAAEVPGRTAKRLGKWWEVFKEKQHREQKENNK--VVDP 120

HSP 2 Score: 31.5722 bits (70), Expect = 1.602e-16
Identity = 14/22 (63.64%), Postives = 16/22 (72.73%), Query Frame = 3

Query:  465 DGXYDRILENFA*KLVKERPXP 530
            +G YD ILE FA K+VKER  P
Sbjct:  123 EGKYDHILETFAEKIVKERSVP 144

HSP 3 Score: 72.0182 bits (175), Expect = 2.570e-11
Identity = 39/68 (57.35%), Postives = 42/68 (61.76%), Query Frame = 1

Query:   88 MXEXHRWRPEEDALCARASLNNMDQGSGTSSHXXMNAPLXXXAQSCLERWKNYLKPGIKKGSLTEEEQ 291
            M E  RWR EEDAL  RA +              MN  L   A+SCLERWKNYLKPGIKKGSLT+EEQ
Sbjct:    1 MRERQRWRSEEDALL-RAYVKQYGPKEWHLVSQRMNTALNRDAKSCLERWKNYLKPGIKKGSLTQEEQ 67

[Close]

BLAST of CV090223 vs. TrEMBL
Match: Q9XH12|Q9XH12_SOLLC (Phantastica OS=Solanum lycopersicum PE=2 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 1.602e-16
Identity = 41/73 (56.16%), Postives = 47/73 (64.38%), Query Frame = 2

Query:  239 KTISNPALRRDPLLKRNNCLVIRLQAXHGNXWKKIAAEVPGRTAXXLXXXWEVFXEKQLREHQEKNXNLVVDP 457
            K    P +++  L +    LVI+LQA HGN WKKIAAEVPGRTA  L   WEVF EKQ RE +E N   VVDP
Sbjct:   50 KNYLKPGIKKGSLTEDEQRLVIQLQAKHGNKWKKIAAEVPGRTAKRLGKWWEVFKEKQQREQKENNK--VVDP 120

HSP 2 Score: 31.5722 bits (70), Expect = 1.602e-16
Identity = 14/22 (63.64%), Postives = 16/22 (72.73%), Query Frame = 3

Query:  465 DGXYDRILENFA*KLVKERPXP 530
            +G YD ILE FA K+VKER  P
Sbjct:  123 EGKYDHILETFAEKIVKERSVP 144

HSP 3 Score: 75.485 bits (184), Expect = 2.324e-12
Identity = 40/68 (58.82%), Postives = 43/68 (63.24%), Query Frame = 1

Query:   88 MXEXHRWRPEEDALCARASLNNMDQGSGTSSHXXMNAPLXXXAQSCLERWKNYLKPGIKKGSLTEEEQ 291
            M E  RWR EEDAL  RA +              MN PL   A+SCLERWKNYLKPGIKKGSLTE+EQ
Sbjct:    1 MRERQRWRAEEDALL-RAYVRQYGPKEWPLVSQRMNTPLNRDAKSCLERWKNYLKPGIKKGSLTEDEQ 67

[Close]

BLAST of CV090223 vs. TrEMBL
Match: Q4VPF4|Q4VPF4_LOTJA (Phantastica transcription factor a OS=Lotus japonicus GN=PHANa PE=2 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 2.083e-16
Identity = 38/64 (59.38%), Postives = 42/64 (65.62%), Query Frame = 2

Query:  239 KTISNPALRRDPLLKRNNCLVIRLQAXHGNXWKKIAAEVPGRTAXXLXXXWEVFXEKQLREHQE 430
            K    P +++  L +    LVIRLQA HGN WKKIAAEVPGRTA  L   WEVF EKQ RE QE
Sbjct:   50 KNYLKPGIKKGSLTEEEQRLVIRLQAKHGNKWKKIAAEVPGRTAKRLGKWWEVFKEKQQREKQE 113

HSP 2 Score: 32.7278 bits (73), Expect = 2.083e-16
Identity = 15/22 (68.18%), Postives = 15/22 (68.18%), Query Frame = 3

Query:  465 DGXYDRILENFA*KLVKERPXP 530
            D  YD ILE FA KLVKE P P
Sbjct:  123 DSKYDHILETFAEKLVKEHPSP 144

HSP 3 Score: 70.0922 bits (170), Expect = 9.766e-11
Identity = 40/69 (57.97%), Postives = 42/69 (60.87%), Query Frame = 1

Query:   88 MXEXHRWRPEEDAL-CARASLNNMDQGSGTSSHXXMNAPLXXXAQSCLERWKNYLKPGIKKGSLTEEEQ 291
            M E  RW  EEDAL CA        +    S    MN  L   A+SCLERWKNYLKPGIKKGSLTEEEQ
Sbjct:    1 MKERQRWTSEEDALLCAYVKQYGPREWHLVSQR--MNTTLHRDAKSCLERWKNYLKPGIKKGSLTEEEQ 67

[Close]

BLAST of CV090223 vs. TrEMBL
Match: Q9FUK9|Q9FUK9_PEA (MYB-related transcription factor PHAN1 OS=Pisum sativum PE=2 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 5.948e-16
Identity = 39/73 (53.42%), Postives = 44/73 (60.27%), Query Frame = 2

Query:  239 KTISNPALRRDPLLKRNNCLVIRLQAXHGNXWKKIAAEVPGRTAXXLXXXWEVFXEKQLREHQEKNXNLVVDP 457
            K    P +++  L +    LVI LQA HGN WKKIAA+VPGRTA  L   WEVF EKQ RE   K  N  VDP
Sbjct:   54 KNYLKPGIKKGSLTEEEQHLVISLQATHGNKWKKIAAQVPGRTAKRLGKWWEVFKEKQQRE--TKGINKTVDP 124

HSP 2 Score: 33.8834 bits (76), Expect = 5.948e-16
Identity = 15/24 (62.50%), Postives = 18/24 (75.00%), Query Frame = 3

Query:  459 LXDGXYDRILENFA*KLVKERPXP 530
            + D  Y+ ILE+FA KLVKERP P
Sbjct:  125 INDSKYEHILESFAEKLVKERPSP 148

HSP 3 Score: 76.6406 bits (187), Expect = 1.043e-12
Identity = 40/72 (55.56%), Postives = 45/72 (62.50%), Query Frame = 1

Query:   76 LHMXMXEXHRWRPEEDALCARASLNNMDQGSGTSSHXXMNAPLXXXAQSCLERWKNYLKPGIKKGSLTEEEQ 291
            + + M +  RWR EEDAL  RA +              MN PL   A+SCLERWKNYLKPGIKKGSLTEEEQ
Sbjct:    1 MSLEMKDRQRWRAEEDALL-RAYVKQYGPREWNLVSQRMNTPLNRDAKSCLERWKNYLKPGIKKGSLTEEEQ 71

[Close]

BLAST of CV090223 vs. Vitis vinifera peptide
Match: GSVIVT01034166001 (assembled CDS)

HSP 1 Score: 80.4925 bits (197), Expect = 2.916e-21
Identity = 42/73 (57.53%), Postives = 47/73 (64.38%), Query Frame = 2

Query:  239 KTISNPALRRDPLLKRNNCLVIRLQAXHGNXWKKIAAEVPGRTAXXLXXXWEVFXEKQLREHQEKNXNLVVDP 457
            K    P +++  L +    LVIRLQA HGN WKKIAAEVPGRTA  L   WEVF EKQ RE +E N   VVDP
Sbjct:   50 KNYLRPGIKKGSLTEEEQRLVIRLQAKHGNKWKKIAAEVPGRTAKRLGKWWEVFKEKQQREQKENNK--VVDP 120

HSP 2 Score: 37.7354 bits (86), Expect = 2.916e-21
Identity = 17/24 (70.83%), Postives = 19/24 (79.17%), Query Frame = 3

Query:  459 LXDGXYDRILENFA*KLVKERPXP 530
            + +G YDRILE FA KLVKERP P
Sbjct:  121 IEEGKYDRILETFAEKLVKERPAP 144

HSP 3 Score: 75.8702 bits (185), Expect = 1.046e-14
Identity = 40/68 (58.82%), Postives = 43/68 (63.24%), Query Frame = 1

Query:   88 MXEXHRWRPEEDALCARASLNNMDQGSGTSSHXXMNAPLXXXAQSCLERWKNYLKPGIKKGSLTEEEQ 291
            M E  RWR EEDAL  RA +              MN PL   A+SCLERWKNYL+PGIKKGSLTEEEQ
Sbjct:    1 MKERQRWRAEEDALL-RAYVRQYGPREWNLVSQRMNTPLGRDAKSCLERWKNYLRPGIKKGSLTEEEQ 67

[Close]

BLAST of CV090223 vs. Vitis vinifera peptide
Match: GSVIVT01036446001 (assembled CDS)

HSP 1 Score: 66.2402 bits (160), Expect = 1.283e-12
Identity = 32/61 (52.46%), Postives = 39/61 (63.93%), Query Frame = 2

Query:  239 KTISNPALRRDPLLKRNNCLVIRLQAXHGNXWKKIAAEVPGRTAXXLXXXWEVFXEKQLRE 421
            K    P +++  L      LVI LQA +GN WKKIA+EVPGRTA  L   WEVF EKQL++
Sbjct:   50 KNYLKPGIKKGSLTLEEQNLVISLQAKYGNKWKKIASEVPGRTAKRLGKWWEVFKEKQLKQ 110

HSP 2 Score: 22.7126 bits (47), Expect = 1.283e-12
Identity = 10/18 (55.56%), Postives = 12/18 (66.67%), Query Frame = 3

Query:  468 GXYDRILENFA*KLVKER 521
            G YD ILE FA K V+ +
Sbjct:  141 GKYDHILETFAEKYVQPK 158

HSP 3 Score: 67.781 bits (164), Expect = 2.850e-12
Identity = 37/68 (54.41%), Postives = 40/68 (58.82%), Query Frame = 1

Query:   88 MXEXHRWRPEEDALCARASLNNMDQGSGTSSHXXMNAPLXXXAQSCLERWKNYLKPGIKKGSLTEEEQ 291
            M E  RW+PEEDAL  RA +              M   L    +SCLERWKNYLKPGIKKGSLT EEQ
Sbjct:    1 MKERQRWQPEEDALL-RAYVKQYGAKEWNLISHRMGKSLDRDPKSCLERWKNYLKPGIKKGSLTLEEQ 67

[Close]

BLAST of CV090223 vs. Vitis vinifera peptide
Match: GSVIVT01024359001 (assembled CDS)

HSP 1 Score: 38.1206 bits (87), Expect = 7.116e-8
Identity = 17/45 (37.78%), Postives = 24/45 (53.33%), Query Frame = 2

Query:  299 VIRLQAXHGNXWKKIAAEVPGRTAXXLXXXWEVFXEKQLREHQEK 433
            +IRL + HGN W  IA  +PGRT   L   W    + +L   ++K
Sbjct:  216 IIRLHSSHGNSWAFIATHLPGRTDNALKNRWNHHLKNKLIGREDK 260

HSP 2 Score: 34.6538 bits (78), Expect = 7.116e-8
Identity = 12/24 (50.00%), Postives = 19/24 (79.17%), Query Frame = 1

Query:  217 QSCLERWKNYLKPGIKKGSLTEEE 288
            +SC ERWKN+L   +K+G+ ++EE
Sbjct:  189 KSCRERWKNHLDSNVKRGNFSQEE 212

[Close]

BLAST of CV090223 vs. Vitis vinifera peptide
Match: GSVIVT01023531001 (assembled CDS)

HSP 1 Score: 43.1282 bits (100), Expect = 2.049e-7
Identity = 22/62 (35.48%), Postives = 31/62 (50.00%), Query Frame = 1

Query:  106 WRPEEDALCARASLNNMDQGSGTSSHXXMNAPLXXXAQSCLERWKNYLKPGIKKGSLTEEEQ 291
            W PEED +      +    G G        A L    +SC  RW NYL+P IK+G+ ++EE+
Sbjct:   17 WTPEEDQILVS---HIQRHGHGNWRALPKEAGLMRCGKSCRLRWTNYLRPDIKRGNFSKEEE 75

HSP 2 Score: 28.1054 bits (61), Expect = 2.049e-7
Identity = 11/29 (37.93%), Postives = 16/29 (55.17%), Query Frame = 2

Query:  332 WKKIAAEVPGRTAXXLXXXWEVFXEKQLR 418
            W  IAA +PGRT   +   W    +K+L+
Sbjct:  115 WSAIAARLPGRTDNEIKNFWHSHLKKRLK 143

[Close]

BLAST of CV090223 vs. Vitis vinifera peptide
Match: GSVIVT01028984001 (assembled CDS)

HSP 1 Score: 49.6766 bits (117), Expect = 8.031e-7
Identity = 27/62 (43.55%), Postives = 33/62 (53.23%), Query Frame = 1

Query:  106 WRPEEDALCARASLNNMDQGSGTSSHXXMNAPLXXXAQSCLERWKNYLKPGIKKGSLTEEEQ 291
            W PEEDA      L     G G  S   +NA L    +SC  RW NYL+PG+K+G  T EE+
Sbjct:   20 WSPEEDARLRNYVLK---YGLGCWSSVPVNAGLQRNGKSCRLRWINYLRPGLKRGMFTIEEE 78

[Close]

BLAST of CV090223 vs. TAIR peptide
Match: AT2G37630.1 (| Symbols: ATPHAN, AS1, ATMYB91, MYB91 | myb-like HTH transcriptional regulator family protein | chr2:15781798-15782901 REVERSE LENGTH=367)

HSP 1 Score: 75.8702 bits (185), Expect = 1.089e-17
Identity = 37/66 (56.06%), Postives = 42/66 (63.64%), Query Frame = 2

Query:  239 KTISNPALRRDPLLKRNNCLVIRLQAXHGNXWKKIAAEVPGRTAXXLXXXWEVFXEKQLREHQEKN 436
            K    P +++  L +    LVIRLQ  HGN WKKIAAEVPGRTA  L   WEVF EKQ RE +E N
Sbjct:   50 KNYLKPGIKKGSLTEEEQRLVIRLQEKHGNKWKKIAAEVPGRTAKRLGKWWEVFKEKQQREEKESN 115

HSP 2 Score: 30.8018 bits (68), Expect = 1.089e-17
Identity = 14/21 (66.67%), Postives = 17/21 (80.95%), Query Frame = 3

Query:  459 LXDGXYDRILENFA*KLVKER 521
            + +  YDRILE+FA KLVKER
Sbjct:  121 IDESKYDRILESFAEKLVKER 141

HSP 3 Score: 73.559 bits (179), Expect = 7.395e-14
Identity = 40/68 (58.82%), Postives = 42/68 (61.76%), Query Frame = 1

Query:   88 MXEXHRWRPEEDALCARASLNNMDQGSGTSSHXXMNAPLXXXAQSCLERWKNYLKPGIKKGSLTEEEQ 291
            M E  RW  EEDAL  RA +              MN PL   A+SCLERWKNYLKPGIKKGSLTEEEQ
Sbjct:    1 MKERQRWSGEEDALL-RAYVRQFGPREWHLVSERMNKPLNRDAKSCLERWKNYLKPGIKKGSLTEEEQ 67

[Close]

BLAST of CV090223 vs. TAIR peptide
Match: AT1G68320.1 (| Symbols: MYB62, AtMYB62, BW62B, BW62C | myb domain protein 62 | chr1:25603842-25604884 FORWARD LENGTH=286)

HSP 1 Score: 51.9878 bits (123), Expect = 2.304e-7
Identity = 28/63 (44.44%), Postives = 35/63 (55.56%), Query Frame = 1

Query:  106 WRPEEDALCARASLNNMDQGSGTSSHXXMNAPLXXXAQSCLERWKNYLKPGIKKGSLTEEEQL 294
            W  EED L     L+N   G G  +H    A L    +SC  RW NYLKP I++G+LT +EQL
Sbjct:   24 WTLEEDTLLTNYILHN---GEGRWNHVAKCAGLKRTGKSCRLRWLNYLKPDIRRGNLTPQEQL 83

The following BLAST results are available for this feature:

BLAST of CV090223 vs. DB:swissprot:display
BLAST of CV090223 vs. Populus trichocarpa peptide v2.0
BLAST of CV090223 vs. P. persica 1.0 peptide
BLAST of CV090223 vs. TrEMBL
BLAST of CV090223 vs. Vitis vinifera peptide
BLAST of CV090223 vs. TAIR peptide

BLAST of CV090223 vs. DB:swissprot:display
Analysis Date: 2011-01-18 (BLAST: Vaccinium corymbosum unigene v1 vs Swissprot)
Total hits: 3


Match Name	E-value	Identity	Description
AS1_ARATH	1.015e-16	56.06	Transcription factor AS1 OS=Arabidopsis thaliana G...	[more]
RS2_MAIZE	3.061e-15	59.02	Protein rough sheath 2 OS=Zea mays GN=RS2 PE=1 SV=...	[more]
RS2_ORYSJ	9.215e-14	50.68	Protein rough sheath 2 homolog OS=Oryza sativa sub...	[more]

BLAST of CV090223 vs. Populus trichocarpa peptide v2.0
Analysis Date: 2011-01-18 (BLAST: Vaccinium corymbosum unigene v1 vs Populus trichocarpa v2.0 peptide)
Total hits: 5


Match Name	E-value	Identity
POPTR_0006s08610.1	3.897e-20	57.58	[more]
POPTR_0017s13950.1	1.006e-11	53.45	[more]
POPTR_0004s10250.1	3.701e-11	50.00	[more]
POPTR_0013s14480.1	6.447e-10	42.86	[more]
POPTR_0006s12530.1	1.939e-7	35.94	[more]

BLAST of CV090223 vs. P. persica 1.0 peptide
Analysis Date: 2011-01-18 (BLAST: Vaccinium corymbosum unigene v1 vs Ppersica v1.0 peptide)
Total hits: 1


Match Name	E-value	Identity	Description
ppa007753m	1.159e-17	56.16		[more]

BLAST of CV090223 vs. TrEMBL
Analysis Date: 2011-01-18 (BLAST: Vaccinium corymbosum unigene v1 vs TrEMBL)
Total hits: 10


Match Name	E-value	Identity	Description
D7THN5\|D7THN5_VITVI	4.973e-19	57.53	Whole genome shotgun sequence of line PN40024, sca...	[more]
B9SYB2\|B9SYB2_RICCO	1.845e-18	57.58	Asymmetric leaves1 and rough sheath, putative OS=R...	[more]
B9T4X8\|B9T4X8_RICCO	3.123e-18	57.58	Asymmetric leaves1 and rough sheath, putative OS=R...	[more]
B9HBM2\|B9HBM2_POPTR	4.055e-18	57.58	Predicted protein OS=Populus trichocarpa GN=MYB224...	[more]
D1LXI9\|D1LXI9_9ROSI	8.925e-18	57.58	Myb family transcription factor OS=Castanea mollis...	[more]
Q84NB7\|Q84NB7_ESCCA	2.551e-17	53.42	Phantastica-like MYB protein OS=Eschscholzia calif...	[more]
Q6Q504\|Q6Q504_TOBAC	1.602e-16	56.16	Phantastica OS=Nicotiana tabacum PE=2 SV=1	[more]
Q9XH12\|Q9XH12_SOLLC	1.602e-16	56.16	Phantastica OS=Solanum lycopersicum PE=2 SV=1	[more]
Q4VPF4\|Q4VPF4_LOTJA	2.083e-16	59.38	Phantastica transcription factor a OS=Lotus japoni...	[more]
Q9FUK9\|Q9FUK9_PEA	5.948e-16	53.42	MYB-related transcription factor PHAN1 OS=Pisum sa...	[more]

BLAST of CV090223 vs. Vitis vinifera peptide
Analysis Date: 2011-01-25 (BLAST: Vaccinium corymbosum unigene v1 vs Vitis vinifera peptide)
Total hits: 5


Match Name	E-value	Identity	Description
GSVIVT01034166001	2.916e-21	57.53	assembled CDS	[more]
GSVIVT01036446001	1.283e-12	52.46	assembled CDS	[more]
GSVIVT01024359001	7.116e-8	37.78	assembled CDS	[more]
GSVIVT01023531001	2.049e-7	35.48	assembled CDS	[more]
GSVIVT01028984001	8.031e-7	43.55	assembled CDS	[more]

BLAST of CV090223 vs. TAIR peptide
Analysis Date: 2011-02-10 (BLAST: Vaccinium corymbosum unigene v1 vs TAIR 10 peptide)
Total hits: 2


Match Name	E-value	Identity	Description
AT2G37630.1	1.089e-17	56.06	\| Symbols: ATPHAN, AS1, ATMYB91, MYB91 \| myb-like ...	[more]
AT1G68320.1	2.304e-7	44.44	\| Symbols: MYB62, AtMYB62, BW62B, BW62C \| myb doma...	[more]

InterPro

Analysis Name: InterProScan analysis for Vaccinium corymbosum unigene v1
Date Performed: 2011-01-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR012287	Homeodomain-related	GENE3D	1.10.10.60	no description	coord: 12..74 score: 1.4
IPR012287	Homeodomain-related	GENE3D	1.10.10.60	no description	coord: 35..66 score: 7.2
IPR015495	Myb transcription factor	PANTHER	PTHR10641	MYB-RELATED	coord: 13..74 score: 2.3
IPR015495	Myb transcription factor	PANTHER	PTHR10641	MYB-RELATED	coord: 21..76 score: 7.5
None	No IPR available	PANTHER	PTHR10641:SF24	ASYMMETRIC LEAVES1 AND ROUGH SHEATH 2	coord: 13..74 score: 2.3
None	No IPR available	PANTHER	PTHR10641:SF24	ASYMMETRIC LEAVES1 AND ROUGH SHEATH 2	coord: 21..76 score: 7.5
None	No IPR available	SEG	seg	seg	coord: 24..37 score: NAcoord: 99..113 score
None	No IPR available	SEG	seg	seg	coord: 8..14 score
IPR009057	Homeodomain-like	SUPERFAMILY	46689	Homeodomain-like	coord: 20..75 score: 8
IPR017930	HTH transcriptional regulator, Myb-type, DNA-binding	PROFILE	PS51294	HTH_MYB	coord: 20..74 score: 10

Properties


Property Name	Value
Singlet in analysis	Vaccinium corymbosum unigene v1

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>CV090223 ID=CV090223; Name=CV090223; organism=Vaccinium corymbosum; type=EST; length=531bp
AAGGAGATGCTTGGTTTGTTAAANAGAAATATGCATGAGTGAGAGAGTTA
TCGATCCGATGGGNNGTAGCGNCNTTTGCACATGNCAATGANNGAAANGC
ATAGGTGGCGACCTGAAGAAGATGCCCTGTGTGCGCGCGCTTCGTTAAAC
AATATGGACCAAGGNAGTGGAACCTCGTCTCACANCGNCATGAACGCGCC
CCTCANTCNCNACGCCCAATCCTGTTTGGAAAGGTGGAAAAACTATCTCA
AACCCGGCATTAAGAAGGGATCCCTTACTGAAGAGGAACAACTGTTTAGT
AATCCGTCTCCAAGCCANNCACGGCAACANATGGAAGAAAATCGCGGCTG
AAGTCCCTGGAAGAACTGCNAANANATTATNANNGNGGTGGGAAGTTTTC
ANAGAGAAGCAGCTCAGAGAACACCAGGAGAAGAACANTAATCTNGTTGT
AGACCCTGCTGANTGACGGAANGTACGATCGGATCCTTGAGAATTTTGCA
TAGAAGTTGGTCAAAGAGCGTCCAAANCCGA

Annotated Terms

The following terms have been associated with this EST:

Vocabulary: **Molecular Function**
Term	Definition
GO:0003677	DNA binding

Vocabulary: **Biological Process**
Term	Definition
GO:0045449	regulation of transcription

Vocabulary: **INTERPRO**
Term	Definition
IPR012287	Homeodomain-related
IPR015495	Myb-like_TF
noIPR	unintegrated
IPR009057	Homeobox-like_sf
IPR017930	Myb_dom