CV090865 | GDV

EST Overview


Name	CV090865
Unique Name	CV090865
Type	EST
Organism	Vaccinium corymbosum (northern highbush blueberry)
Sequence length	531

Libraries


Library Name	Type
LIBEST_014530 cDNA cold acclimated Bluecrop library	cdna_library

Unigenes

This EST is part of the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
	Vaccinium corymbosum unigene v1	EST

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
Vaccinium corymbosum unigene v1	2011-01-18
BLAST: Vaccinium corymbosum unigene v1 vs Ppersica v1.0 peptide	2011-01-18
BLAST: Vaccinium corymbosum unigene v1 vs Swissprot	2011-01-18
BLAST: Vaccinium corymbosum unigene v1 vs Populus trichocarpa v2.0 peptide	2011-01-18
BLAST: Vaccinium corymbosum unigene v1 vs TrEMBL	2011-01-18
BLAST: Vaccinium corymbosum unigene v1 vs Vitis vinifera peptide	2011-01-25
BLAST: Vaccinium corymbosum unigene v1 vs TAIR 10 peptide	2011-02-10
InterProScan analysis for Vaccinium corymbosum unigene v1	2011-01-18

Homology

[Close]

BLAST of CV090865 vs. DB:swissprot:display
Match: PWP2_YEAST (Periodic tryptophan protein 2 OS=Saccharomyces cerevisiae GN=PWP2 PE=1 SV=2)

HSP 1 Score: 66.2402 bits (160), Expect = 1.082e-10
Identity = 35/97 (36.08%), Postives = 57/97 (58.76%), Query Frame = 2

Query:   14 NVTALEWSPDSEYLLAGSKDLTVRLFCLRKLLSGYVKPFLFLGHRDTIVGCFFGVDKITKRVDRAYTVSRDGAIFSWSY----SGNDDNELEGEKSE 292
            ++T+L WS DS ++L  SKDL+ +++ +       +    F GHRD ++G FF  D+     ++ YTVS+DGA+F W +    S +DDNE E +  +
Sbjct:  148 DITSLTWSQDSRFILTTSKDLSAKIWSVDSEEKN-LAATTFNGHRDYVMGAFFSHDQ-----EKIYTVSKDGAVFVWEFTKRPSDDDDNESEDDDKQ 238

[Close]

BLAST of CV090865 vs. DB:swissprot:display
Match: PWP2_NEUCR (Periodic tryptophan protein 2 homolog OS=Neurospora crassa GN=B18D24.40 PE=3 SV=1)

HSP 1 Score: 62.3882 bits (150), Expect = 1.562e-9
Identity = 35/93 (37.63%), Postives = 54/93 (58.06%), Query Frame = 2

Query:   14 NVTALEWSPDSEYLLAGSKDLTVRLFCLRKLLSGYVKPFLFLGHRDTIVGCFFGVDKITKRVDRAYTVSRDGAIFSWSY---SGNDDNELEGE 283
            +V  +EWS DS + L  SKDLT R++ + +   G+  P +  GHR  +VG +F  D+ T      YTVS+DGA+F W Y    G D++ ++ +
Sbjct:  153 DVRHIEWSHDSRFFLTSSKDLTARIWSVDQ-EEGFT-PTVLSGHRQGVVGAWFSKDQET-----IYTVSKDGAVFDWQYVAKPGQDEDMVDDD 238

[Close]

BLAST of CV090865 vs. DB:swissprot:display
Match: PWP2_SCHPO (Periodic tryptophan protein 2 homolog OS=Schizosaccharomyces pombe GN=SPBC713.04c PE=1 SV=1)

HSP 1 Score: 61.2326 bits (147), Expect = 3.481e-9
Identity = 32/80 (40.00%), Postives = 48/80 (60.00%), Query Frame = 2

Query:   14 NVTALEWSPDSEYLLAGSKDLTVRLFCLRKLLSGYVKPFLFLGHRDTIVGCFFGVDKITKRVDRAYTVSRDGAIFSWSYS 253
            ++ ++ WS DS + ++ SKDLT RL  +   + G+  P    GH++T+V  FF  D+ T      YTVS+DGA+F W YS
Sbjct:  148 DIVSISWSADSRFFISTSKDLTARLHSVDP-IEGF-HPCALTGHKNTVVSGFFSKDQQT-----IYTVSKDGALFVWKYS 220

[Close]

BLAST of CV090865 vs. Populus trichocarpa peptide v2.0
Match: POPTR_0001s17340.1 ()

HSP 1 Score: 147.902 bits (372), Expect = 5.275e-38
Identity = 80/146 (54.79%), Postives = 102/146 (69.86%), Query Frame = 2

Query:    2 DCNGNVTALEWSPDSEYLLAGSKDLTVRLFCLRKLLSGYV-KPFLFLGHRDTIVGCFFGVD-KITKRVDRAYTVSRDGAIFSWSYSGNDD---NELEGEKSEPPSPGTPDQRPSEGDHGGDN-ANVKKRKNFDQRVVNSDDGSGYL 421
            DC   VTA++WS D +YLL GSKDL  RLFC+ KL  G + KPFLFLGHRD +VGCFFG D K T +V++ YT++RD  IFSW YSGN+D   +E +   SEP SPGTP +R  EG+  G++  NVKKRK+FD + +  +   GYL
Sbjct:  139 DCEDTVTAIDWSLDCKYLLVGSKDLVARLFCVEKLKDGILNKPFLFLGHRDNVVGCFFGYDKKNTDQVNKVYTITRDCYIFSWGYSGNNDGNFDENDEGNSEPASPGTP-KRDGEGNVNGESLGNVKKRKDFDGKDLGEE---GYL 280

HSP 2 Score: 27.335 bits (59), Expect = 5.275e-38
Identity = 11/35 (31.43%), Postives = 18/35 (51.43%), Query Frame = 1

Query:  427 YRENGELVKRTTLCRLQPNWTACDYHRDXDLXVAG 531
            ++   EL+++    +     TAC YHR  D+ V G
Sbjct:  281 HKRKWELLRKDGFMQSPAKLTACTYHRGLDMVVVG 315

[Close]

BLAST of CV090865 vs. P. persica 1.0 peptide
Match: ppa001158m ()

HSP 1 Score: 162.155 bits (409), Expect = 1.948e-43
Identity = 82/145 (56.55%), Postives = 103/145 (71.03%), Query Frame = 2

Query:    2 DCNGNVTALEWSPDSEYLLAGSKDLTVRLFCLRKLLSGYVK--PFLFLGHRDTIVGCFFGVDKITKRVDRAYTVSRDGAIFSWSYSGNDDNELEG-EKSEPPSPGTPDQRPSEGDHGGDNANVKKRKNFDQRVVNSDDGSGYLLH 427
            DC+  V +LEWSPDS YLLAGSKDLT RLFC++KL  G +K  PF+FLGHRDT+VG FFG+DK T +V   YTV+RD  IFSW  SGN D E +G + +EPPSPGTPD+       G  + ++KKRK ++ R  N D+  GYLL+
Sbjct:  139 DCDDKVVSLEWSPDSSYLLAGSKDLTARLFCMKKLKFGVLKTKPFMFLGHRDTVVGVFFGIDKNTNKVCNVYTVTRDCYIFSWGLSGN-DGEFDGMDVTEPPSPGTPDRDGDGTVEGVGSGDIKKRKGYEGRGGNLDEEGGYLLN 282

HSP 2 Score: 30.8018 bits (68), Expect = 1.948e-43
Identity = 12/30 (40.00%), Postives = 18/30 (60.00%), Query Frame = 1

Query:  442 ELVKRTTLCRLQPNWTACDYHRDXDLXVAG 531
            EL+++    + Q   TACDYHR  ++ V G
Sbjct:  286 ELLRKDNFMQAQAKLTACDYHRGLNMLVVG 315

[Close]

BLAST of CV090865 vs. TrEMBL
Match: A5BLN0|A5BLN0_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_033250 PE=4 SV=1)

HSP 1 Score: 167.933 bits (424), Expect = 1.183e-42
Identity = 91/154 (59.09%), Postives = 105/154 (68.18%), Query Frame = 2

Query:    2 DCNGNVTALEWSPDSEYLLAGSKDLTVRLFCLRKL---LSGYVKPFLFLGHRDTIVGCFFGVDKITKRVDRAYTVSRDGAIFSWSYSGNDD--NELEGEKSEPPSPGTPDQRPSEGDHGGDNAN----VKKRKNFDQRVVNSDDGSGYLLHTGK 436
            DC+  VTAL+WSPDS Y+LAGSKDLTVRLFCL+K    L+   KPFLFLGHRD+IVG FFGVD  T RV +AYT++RD  IFSW YS N+    EL GE SEPPSPGTP++       GG  AN    VKKRK FD    +  +  G LLH GK
Sbjct:  139 DCDDKVTALDWSPDSNYVLAGSKDLTVRLFCLKKFDKELTALNKPFLFLGHRDSIVGAFFGVDNKTNRVCKAYTITRDCYIFSWGYSDNEGKVEELGGEDSEPPSPGTPEKGSDRDGKGGLEANVGMRVKKRKGFDDIGGDLVEECGNLLHKGK 292

HSP 2 Score: 29.6462 bits (65), Expect = 1.183e-42
Identity = 12/30 (40.00%), Postives = 16/30 (53.33%), Query Frame = 1

Query:  442 ELVKRTTLCRLQPNWTACDYHRDXDLXVAG 531
            EL+++    +     T CDYHR  DL V G
Sbjct:  294 ELLRKDNFSQAPAKLTTCDYHRGLDLVVVG 323

[Close]

BLAST of CV090865 vs. TrEMBL
Match: B9RV10|B9RV10_RICCO (WD-repeat protein, putative OS=Ricinus communis GN=RCOM_0897950 PE=4 SV=1)

HSP 1 Score: 155.221 bits (391), Expect = 5.635e-39
Identity = 82/152 (53.95%), Postives = 102/152 (67.11%), Query Frame = 2

Query:    2 DCNGNVTALEWSPDSEYLLAGSKDLTVRLFCLRKLLSGYV-KPFLFLGHRDTIVGCFFGVD-KITKRVDRAYTVSRDGAIFSWSYSGND---DNELEGEKSEPPSPGTPDQRPSEGDHGGDNANVKKRKNFDQRVVNSDDGSGYLLHTGKMG 442
            DC   VTA++WS DS+YLL GSKDLT R FC+ +L +G + KPFLFLGHRD +VGCFFG D KI+ ++ RAYT++RDG +FSWSY  N+   D E +GE  EP SPGT ++       GG   NVKKRK FD       +G G+ LH GK G
Sbjct:  139 DCEDTVTAIDWSLDSKYLLVGSKDLTARHFCVERLNNGLLNKPFLFLGHRDAVVGCFFGYDKKISDKIIRAYTIARDGYVFSWSYKDNNGKFDKEDDGEDLEPLSPGTQEKDGEGNVDGGSERNVKKRKGFDGN-DGEQEGEGF-LHKGKWG 288

HSP 2 Score: 30.0314 bits (66), Expect = 5.635e-39
Identity = 12/19 (63.16%), Postives = 16/19 (84.21%), Query Frame = 3

Query:  429 QGKWGIG*KDYFMQAPAKL 485
            +GKWG+  KD FMQ+PAK+
Sbjct:  284 KGKWGLVRKDGFMQSPAKV 302

[Close]

BLAST of CV090865 vs. TrEMBL
Match: D7KCR5|D7KCR5_ARALY (Transducin family protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_888937 PE=4 SV=1)

HSP 1 Score: 157.147 bits (396), Expect = 2.755e-38
Identity = 80/144 (55.56%), Postives = 102/144 (70.83%), Query Frame = 2

Query:   17 VTALEWSPDSEYLLAGSKDLTVRLFCLRKLLSGYVKPFLFLGHRDTIVGCFFGVDKITKRVDRAYTVSRDGAIFSWSYSGND--DNELEGEKSEPPSPGTPDQRPS--EGDHGGDNANVKKRKNFDQRVVNSDDGSGYLLHTGK 436
            V +LEWS DS+YLL GSKDL  RLFC+RKL     KPFLFLGHRD++VGCFFGVDK+T +V+RA+T++RDG IFSW Y+G D   +E E   SEPPSP TP++       + GG   ++KKRK +D + + SDD   Y +H GK
Sbjct:  144 VVSLEWSLDSDYLLVGSKDLAARLFCVRKLKGVLNKPFLFLGHRDSVVGCFFGVDKMTNKVNRAFTIARDGYIFSWGYTGKDVKMDESEDGHSEPPSPVTPERADEVMVENGGGVGTDLKKRKEYDGKDLESDDDEEY-MHRGK 286

HSP 2 Score: 25.7942 bits (55), Expect = 2.755e-38
Identity = 9/15 (60.00%), Postives = 11/15 (73.33%), Query Frame = 1

Query:  487 TACDYHRDXDLXVAG 531
            TACDYH+  D+ V G
Sbjct:  303 TACDYHQGLDMVVVG 317

[Close]

BLAST of CV090865 vs. TrEMBL
Match: B9GWE4|B9GWE4_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_817077 PE=4 SV=1)

HSP 1 Score: 143.665 bits (361), Expect = 4.192e-36
Identity = 73/132 (55.30%), Postives = 90/132 (68.18%), Query Frame = 2

Query:    2 DCNGNVTALEWSPDSEYLLAGSKDLTVRLFCLRKLLSGYV-KPFLFLGHRDTIVGCFFGVD-KITKRVDRAYTVSRDGAIFSWSYSGNDD---NELEGEKSEPPSPGTPDQRPSEGDHGGDNANVKKRKNFD 382
            DC   VTA++WS D +YLL GSKDL+ RLFC+ KL  G + KPFLFLGHRD +VGCFFG D K T +V + YT++RD  IFSW YSGN+D   +E +G  SEP  PGTP++        G    VKKRK+FD
Sbjct:  139 DCEDTVTAIDWSLDCKYLLVGSKDLSARLFCVEKLKDGILNKPFLFLGHRDNVVGCFFGYDKKNTNKVSKVYTITRDCYIFSWGYSGNNDGNFDENDGGISEPAFPGTPERDGEGNMDSGSVGTVKKRKDFD 270

HSP 2 Score: 31.9574 bits (71), Expect = 4.192e-36
Identity = 13/35 (37.14%), Postives = 20/35 (57.14%), Query Frame = 1

Query:  427 YRENGELVKRTTLCRLQPNWTACDYHRDXDLXVAG 531
            ++E  EL+++    +     TACDYHR  D+ V G
Sbjct:  278 HKEKWELLRKDGFMQSPAKLTACDYHRGLDMVVVG 312

[Close]

BLAST of CV090865 vs. TrEMBL
Match: Q8VYZ5|Q8VYZ5_ARATH (Putative uncharacterized protein At1g15440 OS=Arabidopsis thaliana GN=At1g15440 PE=2 SV=1)

HSP 1 Score: 149.058 bits (375), Expect = 7.113e-36
Identity = 78/148 (52.70%), Postives = 99/148 (66.89%), Query Frame = 2

Query:   17 VTALEWSPDSEYLLAGSKDLTVRLFCLRKLLSGYVKPFLFLGHRDTIVGCFFGVDKITKRVDRAYTVSRDGAIFSWSYSGND--DNELEGEKSEPPSPGTPDQRPS--EGDHGGDNANVKKRKNFDQRVVNS----DDGSGYLLHTGK 436
            V +LEWS DS+YLL GS+DL  RLFC+RKL     KPFLFLGHRD++VGCFFGVDK+T +V+RA+T++RDG IFSW Y+  D   +E E   SEPPSP TPD+       + GG    +KKRK +D + + S    DD     +H GK
Sbjct:  144 VVSLEWSLDSDYLLVGSRDLAARLFCVRKLKGVLNKPFLFLGHRDSVVGCFFGVDKMTNKVNRAFTIARDGYIFSWGYTEKDVKMDESEDGHSEPPSPVTPDRADEVMVENGGGVGTELKKRKEYDGKGLESDEEGDDDDEEYMHRGK 291

HSP 2 Score: 25.7942 bits (55), Expect = 7.113e-36
Identity = 9/15 (60.00%), Postives = 11/15 (73.33%), Query Frame = 1

Query:  487 TACDYHRDXDLXVAG 531
            TACDYH+  D+ V G
Sbjct:  308 TACDYHQGLDMVVVG 322

[Close]

BLAST of CV090865 vs. TrEMBL
Match: Q9XI24|Q9XI24_ARATH (F9L1.40 protein OS=Arabidopsis thaliana GN=F9L1.40 PE=1 SV=1)

HSP 1 Score: 149.058 bits (375), Expect = 7.114e-36
Identity = 78/148 (52.70%), Postives = 99/148 (66.89%), Query Frame = 2

Query:   17 VTALEWSPDSEYLLAGSKDLTVRLFCLRKLLSGYVKPFLFLGHRDTIVGCFFGVDKITKRVDRAYTVSRDGAIFSWSYSGND--DNELEGEKSEPPSPGTPDQRPS--EGDHGGDNANVKKRKNFDQRVVNS----DDGSGYLLHTGK 436
            V +LEWS DS+YLL GS+DL  RLFC+RKL     KPFLFLGHRD++VGCFFGVDK+T +V+RA+T++RDG IFSW Y+  D   +E E   SEPPSP TPD+       + GG    +KKRK +D + + S    DD     +H GK
Sbjct:  144 VVSLEWSLDSDYLLVGSRDLAARLFCVRKLKGVLNKPFLFLGHRDSVVGCFFGVDKMTNKVNRAFTIARDGYIFSWGYTEKDVKMDESEDGHSEPPSPVTPDRADEVMVENGGGVGTELKKRKEYDGKGLESDEEGDDDDEEYMHRGK 291

HSP 2 Score: 25.7942 bits (55), Expect = 7.114e-36
Identity = 9/15 (60.00%), Postives = 11/15 (73.33%), Query Frame = 1

Query:  487 TACDYHRDXDLXVAG 531
            TACDYH+  D+ V G
Sbjct:  308 TACDYHQGLDMVVVG 322

[Close]

BLAST of CV090865 vs. TrEMBL
Match: B9GKY2|B9GKY2_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_751482 PE=4 SV=1)

HSP 1 Score: 147.517 bits (371), Expect = 7.114e-36
Identity = 80/146 (54.79%), Postives = 102/146 (69.86%), Query Frame = 2

Query:    2 DCNGNVTALEWSPDSEYLLAGSKDLTVRLFCLRKLLSGYV-KPFLFLGHRDTIVGCFFGVD-KITKRVDRAYTVSRDGAIFSWSYSGNDD---NELEGEKSEPPSPGTPDQRPSEGDHGGDN-ANVKKRKNFDQRVVNSDDGSGYL 421
            DC   VTA++WS D +YLL GSKDL  RLFC+ KL  G + KPFLFLGHRD +VGCFFG D K T +V++ YT++RD  IFSW YSGN+D   +E +   SEP SPGTP +R  EG+  G++  NVKKRK+FD + +  +   GYL
Sbjct:  139 DCEDTVTAIDWSLDCKYLLVGSKDLVARLFCVEKLKDGILNKPFLFLGHRDNVVGCFFGYDKKNTDQVNKVYTITRDCYIFSWGYSGNNDGNFDENDEGNSEPASPGTP-KRNGEGNVNGESLGNVKKRKDFDGKDLGEE---GYL 280

HSP 2 Score: 27.335 bits (59), Expect = 7.114e-36
Identity = 11/35 (31.43%), Postives = 18/35 (51.43%), Query Frame = 1

Query:  427 YRENGELVKRTTLCRLQPNWTACDYHRDXDLXVAG 531
            ++   EL+++    +     TAC YHR  D+ V G
Sbjct:  281 HKRKWELLRKDGFMQSPAKLTACTYHRGLDMVVVG 315

[Close]

BLAST of CV090865 vs. TrEMBL
Match: A2Q5D0|A2Q5D0_MEDTR (Periodic tryptophan protein-associated region; WD40-like OS=Medicago truncatula GN=MtrDRAFT_AC160924g14v1 PE=4 SV=1)

HSP 1 Score: 129.028 bits (323), Expect = 2.290e-30
Identity = 71/126 (56.35%), Postives = 86/126 (68.25%), Query Frame = 2

Query:    2 DCNGNVTALEWSPDSEYLLAGSKDLTVRLFCLRKLLSGY-VKPFLFLGHRDTIVGCFFGVDKITKRVDRAYTVSRDGAIFSWSYSGNDDNELEGEKSEPPSPGTPDQRPSEGD-HGGDNANVKKRK 373
            D +  VTA +WS DS YLL  SKDLT R+ CL+K+  G   KPFLFLGHRD++VG FFGVD  T +V + YTV+RD  I SW ++  +D EL    SEPPSPGTPD R  EGD    D+ +VKKRK
Sbjct:  139 DFHAKVTAFDWSSDSNYLLVASKDLTARILCLKKVYGGVKYKPFLFLGHRDSVVGSFFGVDSKTSKVSKVYTVTRDCYILSWGFT--EDEEL----SEPPSPGTPD-RDVEGDLMVEDDGDVKKRK 257

HSP 2 Score: 27.335 bits (59), Expect = 2.290e-30
Identity = 11/30 (36.67%), Postives = 17/30 (56.67%), Query Frame = 1

Query:  442 ELVKRTTLCRLQPNWTACDYHRDXDLXVAG 531
            EL+++    +     +ACDYHR  D+ V G
Sbjct:  273 ELLRKDCFNQAPAKVSACDYHRGLDMVVVG 302

[Close]

BLAST of CV090865 vs. TrEMBL
Match: C0PHU7|C0PHU7_MAIZE (Putative uncharacterized protein OS=Zea mays PE=2 SV=1)

HSP 1 Score: 118.242 bits (295), Expect = 4.776e-29
Identity = 68/146 (46.58%), Postives = 86/146 (58.90%), Query Frame = 2

Query:   17 VTALEWSPDSEYLLAGSKDLTVRLFCLRKLLSGYVKPFLFLGHRDTIVGCFFGVDKITKRVDRAYTVSRDGAIFSWS-YSGNDDNELEGEKSEPPSPGTPDQRPSEGDHGGDNANVKKRKNFD-----QRVVNSDDGSGYLLHTGK 436
            VTA +WSPDS +LLA  KDLT RL  ++K L G  KPFLFLGHR  +VG FF  DK T+RV   YTVS+DGAIF+W    GN++N    + S PPSPGTP+Q        G   NV      D     ++++   +G   +LH  K
Sbjct:  145 VTAFDWSPDSAFLLASCKDLTARLLPVKKGLGG--KPFLFLGHRAAVVGAFFATDKKTRRVKGVYTVSKDGAIFTWDLVEGNEEN----DTSPPPSPGTPEQ--------GSKQNVVDAMELDGGSRKRKILGELEGLDTMLHLAK 276

HSP 2 Score: 28.4906 bits (62), Expect = 4.776e-29
Identity = 10/15 (66.67%), Postives = 12/15 (80.00%), Query Frame = 1

Query:  487 TACDYHRDXDLXVAG 531
            TACDYHR+ D+ V G
Sbjct:  293 TACDYHRELDMVVVG 307

HSP 3 Score: 25.409 bits (54), Expect = 4.776e-29
Identity = 10/17 (58.82%), Postives = 13/17 (76.47%), Query Frame = 3

Query:  435 KWGIG*KDYFMQAPAKL 485
            KW +  K +FMQ+PAKL
Sbjct:  276 KWELREKHFFMQSPAKL 292

[Close]

BLAST of CV090865 vs. TrEMBL
Match: C5Z1B2|C5Z1B2_SORBI (Putative uncharacterized protein Sb09g025880 OS=Sorghum bicolor GN=Sb09g025880 PE=4 SV=1)

HSP 1 Score: 116.316 bits (290), Expect = 1.755e-28
Identity = 63/120 (52.50%), Postives = 78/120 (65.00%), Query Frame = 2

Query:   17 VTALEWSPDSEYLLAGSKDLTVRLFCLRKLLSGYVKPFLFLGHRDTIVGCFFGVDKITKRVDRAYTVSRDGAIFSWS-YSGNDDNELEGEKSEPPSPGTPDQRPSEGDHGGDNANVKKRK 373
            VTA +WSPDS +LLA  KDLT RL  ++K L    KPFLFLGHR  +VG FF  DK T RV   YTVS+DGAIF+W+   GN++N    + S PPSPGTP+Q   + D    +   +KRK
Sbjct:  145 VTAFDWSPDSAFLLASCKDLTARLLPVKKGLGS--KPFLFLGHRAAVVGAFFATDKKTGRVKGVYTVSKDGAIFTWNLVEGNEEN----DTSPPPSPGTPEQGSEQNDVMELDGGSRKRK 258

HSP 2 Score: 28.4906 bits (62), Expect = 1.755e-28
Identity = 10/15 (66.67%), Postives = 12/15 (80.00%), Query Frame = 1

Query:  487 TACDYHRDXDLXVAG 531
            TACDYHR+ D+ V G
Sbjct:  291 TACDYHRELDMVVVG 305

HSP 3 Score: 25.409 bits (54), Expect = 1.755e-28
Identity = 10/17 (58.82%), Postives = 13/17 (76.47%), Query Frame = 3

Query:  435 KWGIG*KDYFMQAPAKL 485
            KW +  K +FMQ+PAKL
Sbjct:  274 KWELQEKHFFMQSPAKL 290

[Close]

BLAST of CV090865 vs. Vitis vinifera peptide
Match: GSVIVT01017243001 (assembled CDS)

HSP 1 Score: 60.4622 bits (145), Expect = 4.497e-10
Identity = 35/87 (40.23%), Postives = 42/87 (48.28%), Query Frame = 2

Query:    2 DCNGNVTALEWSPDSEYLLAGSKDLTVRLFCLRKLLSGYVKPFLFLGHRDTIVGCFFGVDKITKRVDRAYTVSRDGAIFSWSYSGND 262
            DC+  VTAL+WSPDS Y+LAGSKDLTV                                     RV +AYT++RD  IFSW YS N+
Sbjct:  139 DCDDKVTALDWSPDSNYVLAGSKDLTV-------------------------------------RVCKAYTITRDCYIFSWGYSDNE 188

[Close]

BLAST of CV090865 vs. TAIR peptide
Match: AT1G15440.1 (| Symbols: PWP2, ATPWP2 | periodic tryptophan protein 2 | chr1:5306159-5309460 REVERSE LENGTH=900)

HSP 1 Score: 149.058 bits (375), Expect = 5.971e-38
Identity = 78/148 (52.70%), Postives = 99/148 (66.89%), Query Frame = 2

Query:   17 VTALEWSPDSEYLLAGSKDLTVRLFCLRKLLSGYVKPFLFLGHRDTIVGCFFGVDKITKRVDRAYTVSRDGAIFSWSYSGND--DNELEGEKSEPPSPGTPDQRPS--EGDHGGDNANVKKRKNFDQRVVNS----DDGSGYLLHTGK 436
            V +LEWS DS+YLL GS+DL  RLFC+RKL     KPFLFLGHRD++VGCFFGVDK+T +V+RA+T++RDG IFSW Y+  D   +E E   SEPPSP TPD+       + GG    +KKRK +D + + S    DD     +H GK
Sbjct:  144 VVSLEWSLDSDYLLVGSRDLAARLFCVRKLKGVLNKPFLFLGHRDSVVGCFFGVDKMTNKVNRAFTIARDGYIFSWGYTEKDVKMDESEDGHSEPPSPVTPDRADEVMVENGGGVGTELKKRKEYDGKGLESDEEGDDDDEEYMHRGK 291

HSP 2 Score: 25.7942 bits (55), Expect = 5.971e-38
Identity = 9/15 (60.00%), Postives = 11/15 (73.33%), Query Frame = 1

Query:  487 TACDYHRDXDLXVAG 531
            TACDYH+  D+ V G
Sbjct:  308 TACDYHQGLDMVVVG 322

[Close]

BLAST of CV090865 vs. TAIR peptide
Match: AT1G15440.2 (| Symbols: PWP2 | periodic tryptophan protein 2 | chr1:5306159-5309460 REVERSE LENGTH=860)

HSP 1 Score: 69.3218 bits (168), Expect = 2.745e-14
Identity = 50/148 (33.78%), Postives = 65/148 (43.92%), Query Frame = 2

Query:   17 VTALEWSPDSEYLLAGSKDLTVRLFCLRKLLSGYVKPFLFLGHRDTIVGCFFGVDKITKRVDRAYTVSRDGAIFSWSYSGND--DNELEGEKSEPPSPGTPDQRPS--EGDHGGDNANVKKRKNFDQRVVNS----DDGSGYLLHTGK 436
            V +LEWS DS+YLL GS+DL  R                                        A+T++RDG IFSW Y+  D   +E E   SEPPSP TPD+       + GG    +KKRK +D + + S    DD     +H GK
Sbjct:  144 VVSLEWSLDSDYLLVGSRDLAAR----------------------------------------AFTIARDGYIFSWGYTEKDVKMDESEDGHSEPPSPVTPDRADEVMVENGGGVGTELKKRKEYDGKGLESDEEGDDDDEEYMHRGK 251

HSP 2 Score: 25.7942 bits (55), Expect = 2.745e-14
Identity = 9/15 (60.00%), Postives = 11/15 (73.33%), Query Frame = 1

Query:  487 TACDYHRDXDLXVAG 531
            TACDYH+  D+ V G
Sbjct:  268 TACDYHQGLDMVVVG 282

The following BLAST results are available for this feature:

BLAST of CV090865 vs. DB:swissprot:display
BLAST of CV090865 vs. Populus trichocarpa peptide v2.0
BLAST of CV090865 vs. P. persica 1.0 peptide
BLAST of CV090865 vs. TrEMBL
BLAST of CV090865 vs. Vitis vinifera peptide
BLAST of CV090865 vs. TAIR peptide

BLAST of CV090865 vs. DB:swissprot:display
Analysis Date: 2011-01-18 (BLAST: Vaccinium corymbosum unigene v1 vs Swissprot)
Total hits: 3


Match Name	E-value	Identity	Description
PWP2_YEAST	1.082e-10	36.08	Periodic tryptophan protein 2 OS=Saccharomyces cer...	[more]
PWP2_NEUCR	1.562e-9	37.63	Periodic tryptophan protein 2 homolog OS=Neurospor...	[more]
PWP2_SCHPO	3.481e-9	40.00	Periodic tryptophan protein 2 homolog OS=Schizosac...	[more]

BLAST of CV090865 vs. Populus trichocarpa peptide v2.0
Analysis Date: 2011-01-18 (BLAST: Vaccinium corymbosum unigene v1 vs Populus trichocarpa v2.0 peptide)
Total hits: 1


Match Name	E-value	Identity	Description
POPTR_0001s17340.1	5.275e-38	54.79		[more]

BLAST of CV090865 vs. P. persica 1.0 peptide
Analysis Date: 2011-01-18 (BLAST: Vaccinium corymbosum unigene v1 vs Ppersica v1.0 peptide)
Total hits: 1


Match Name	E-value	Identity	Description
ppa001158m	1.948e-43	56.55		[more]

BLAST of CV090865 vs. TrEMBL
Analysis Date: 2011-01-18 (BLAST: Vaccinium corymbosum unigene v1 vs TrEMBL)
Total hits: 10


Match Name	E-value	Identity	Description
A5BLN0\|A5BLN0_VITVI	1.183e-42	59.09	Putative uncharacterized protein OS=Vitis vinifera...	[more]
B9RV10\|B9RV10_RICCO	5.635e-39	53.95	WD-repeat protein, putative OS=Ricinus communis GN...	[more]
D7KCR5\|D7KCR5_ARALY	2.755e-38	55.56	Transducin family protein OS=Arabidopsis lyrata su...	[more]
B9GWE4\|B9GWE4_POPTR	4.192e-36	55.30	Predicted protein OS=Populus trichocarpa GN=POPTRD...	[more]
Q8VYZ5\|Q8VYZ5_ARATH	7.113e-36	52.70	Putative uncharacterized protein At1g15440 OS=Arab...	[more]
Q9XI24\|Q9XI24_ARATH	7.114e-36	52.70	F9L1.40 protein OS=Arabidopsis thaliana GN=F9L1.40...	[more]
B9GKY2\|B9GKY2_POPTR	7.114e-36	54.79	Predicted protein OS=Populus trichocarpa GN=POPTRD...	[more]
A2Q5D0\|A2Q5D0_MEDTR	2.290e-30	56.35	Periodic tryptophan protein-associated region; WD4...	[more]
C0PHU7\|C0PHU7_MAIZE	4.776e-29	46.58	Putative uncharacterized protein OS=Zea mays PE=2 ...	[more]
C5Z1B2\|C5Z1B2_SORBI	1.755e-28	52.50	Putative uncharacterized protein Sb09g025880 OS=So...	[more]

BLAST of CV090865 vs. Vitis vinifera peptide
Analysis Date: 2011-01-25 (BLAST: Vaccinium corymbosum unigene v1 vs Vitis vinifera peptide)
Total hits: 1


Match Name	E-value	Identity	Description
GSVIVT01017243001	4.497e-10	40.23	assembled CDS	[more]

BLAST of CV090865 vs. TAIR peptide
Analysis Date: 2011-02-10 (BLAST: Vaccinium corymbosum unigene v1 vs TAIR 10 peptide)
Total hits: 2


Match Name	E-value	Identity	Description
AT1G15440.1	5.971e-38	52.70	\| Symbols: PWP2, ATPWP2 \| periodic tryptophan prot...	[more]
AT1G15440.2	2.745e-14	33.78	\| Symbols: PWP2 \| periodic tryptophan protein 2 \| ...	[more]

InterPro

Analysis Name: InterProScan analysis for Vaccinium corymbosum unigene v1
Date Performed: 2011-01-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR011046	WD40 repeat-like-containing domain	SUPERFAMILY	50978	WD40 repeat-like	coord: 2..84 score: 7.6
IPR015943	WD40/YVTN repeat-like-containing domain	GENE3D	2.130.10.10	no description	coord: 3..88 score: 6
IPR017986	WD40-repeat-containing domain	PROFILE	PS50294	WD_REPEATS_REGION	coord: 1..91 score: 8
IPR019781	WD40 repeat, subgroup	PFAM	PF00400	WD40	coord: 4..30 score: 2.8
IPR019782	WD40 repeat 2	PROFILE	PS50082	WD_REPEATS_2	coord: 1..30 score: 9
None	No IPR available	PANTHER	PTHR19858	WD40 REPEAT PROTEIN	coord: 5..119 score: 2.6
None	No IPR available	SEG	seg	seg	coord: 166..175 score

Properties


Property Name	Value
Singlet in analysis	Vaccinium corymbosum unigene v1

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>CV090865 ID=CV090865; Name=CV090865; organism=Vaccinium corymbosum; type=EST; length=531bp
CGATTGTAATGGCAACGTGACGGCGTTGGAATGGAGTCCCGACTCAGAGT
ACTTGTTGGCCGGGTCGAAGGATTTGACGGTGAGGTTGTTTTGTTTGAGG
AAATTATTGAGTGGGTATGTTAAGCCTTTCTTGTTTTTAGGTCATAGGGA
TACAATTGTTGGTTGTTTCTTTGGTGTTGATAAGATAACTAAAAGGGTTG
ATAGGGCTTATACTGTTTCGCGTGATGGCGCAATTTTTAGCTGGAGTTAT
AGTGGCAATGATGATAATGAATTAGAGGGTGAAAAATCAGAACCACCCTC
TCCCGGTACACCTGATCAGAGGCCTAGTGAGGGTGATCATGGTGGTGATA
ATGCTAATGTGAAGAAAAGGAAGAATTTTGATCAGAGAGTTGTTAATTCG
GATGATGGCAGTGGGTATTTGTTGCATACAGGGAAAATGGGGAATTGGTT
AAAAGGACTACTTTATGCAGGCTCCAGCCAAATTGGACGGCATGTGATTA
TCATCGGGATCNTGATCTTGNGGTTGCGGGG

Annotated Terms

The following terms have been associated with this EST:

Vocabulary: **INTERPRO**
Term	Definition
IPR011046	WD40 repeat-like-containing domain
IPR015943	WD40/YVTN_repeat-like_dom_sf
IPR017986	WD40_repeat_dom
IPR019781	WD40 repeat, subgroup
IPR019782	WD40 repeat 2
noIPR	unintegrated