CV190453 | GDV

EST Overview


Name	CV190453
Unique Name	CV190453
Type	EST
Organism	Vaccinium corymbosum (northern highbush blueberry)
Sequence length	635

Libraries


Library Name	Type
LIBEST_016374 Vco01	cdna_library

Unigenes

This EST is part of the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
	Vaccinium corymbosum unigene v1	EST

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
Vaccinium corymbosum unigene v1	2011-01-18
BLAST: Vaccinium corymbosum unigene v1 vs Ppersica v1.0 peptide	2011-01-18
BLAST: Vaccinium corymbosum unigene v1 vs Populus trichocarpa v2.0 peptide	2011-01-18
BLAST: Vaccinium corymbosum unigene v1 vs TrEMBL	2011-01-18
BLAST: Vaccinium corymbosum unigene v1 vs Vitis vinifera peptide	2011-01-25
BLAST: Vaccinium corymbosum unigene v1 vs TAIR 10 peptide	2011-02-10
InterProScan analysis for Vaccinium corymbosum unigene v1	2011-01-18

Homology

[Close]

BLAST of CV190453 vs. Populus trichocarpa peptide v2.0
Match: POPTR_0014s17600.1 ()

HSP 1 Score: 118.242 bits (295), Expect = 4.093e-27
Identity = 62/93 (66.67%), Postives = 69/93 (74.19%), Query Frame = 1

Query:    4 LTGVSAQDLFLWFPVKGIRVDVPSSGLIYFDVGVVFKQFSVSLFETPRDCLAVEPPEA-----------AASKSQYGKLRYRRDPGDFGRAIL 249
            L+G+SAQ+LFLWFPVKGIRVDVPSSGLIYFDVGVVFKQFS+SLFE PRDC+AV   E            A +KSQ GKLRY  D  +FGR  L
Sbjct:   92 LSGISAQELFLWFPVKGIRVDVPSSGLIYFDVGVVFKQFSLSLFEMPRDCVAVRDEEIEAVRHGKFIADAVAKSQSGKLRYGLDQENFGRDFL 184

[Close]

BLAST of CV190453 vs. Populus trichocarpa peptide v2.0
Match: POPTR_0002s24000.1 ()

HSP 1 Score: 111.694 bits (278), Expect = 3.831e-25
Identity = 58/93 (62.37%), Postives = 68/93 (73.12%), Query Frame = 1

Query:    4 LTGVSAQDLFLWFPVKGIRVDVPSSGLIYFDVGVVFKQFSVSLFETPRDCLAVEPPEAAA-----------SKSQYGKLRYRRDPGDFGRAIL 249
            L+G+S+Q+LFLWFPVKGIRVDVPSSGLIYFDVGVVFKQFS+SLFE PRDC+AV   E  A           +KSQ GK+ Y  +  +FGR  L
Sbjct:   89 LSGISSQELFLWFPVKGIRVDVPSSGLIYFDVGVVFKQFSLSLFEMPRDCVAVRNEEIVALRHRKFIADTVAKSQPGKVGYELEQENFGRDFL 181

[Close]

BLAST of CV190453 vs. Populus trichocarpa peptide v2.0
Match: POPTR_0011s13350.1 ()

HSP 1 Score: 68.5514 bits (166), Expect = 3.719e-12
Identity = 31/51 (60.78%), Postives = 38/51 (74.51%), Query Frame = 1

Query:    1 GLTGVSAQDLFLWFPVKGIRVDVPSSGLIYFDVGVVFKQFSVSLFETPRDC 153
            G+ G+S ++LFLW PVK I VD P SGLI FD+GV  KQ S+SLFE P +C
Sbjct:   94 GVVGLSQEELFLWLPVKDITVDDPRSGLILFDIGVAHKQLSLSLFEDPPNC 144

[Close]

BLAST of CV190453 vs. Populus trichocarpa peptide v2.0
Match: POPTR_0001s44000.1 ()

HSP 1 Score: 68.1662 bits (165), Expect = 4.857e-12
Identity = 31/51 (60.78%), Postives = 38/51 (74.51%), Query Frame = 1

Query:    1 GLTGVSAQDLFLWFPVKGIRVDVPSSGLIYFDVGVVFKQFSVSLFETPRDC 153
            G+ G+S ++LFLW PVK I VD P SGLI FD+GV  KQ S+SLFE P +C
Sbjct:   94 GVVGLSQEELFLWLPVKDIIVDDPGSGLILFDIGVAHKQLSLSLFEDPPNC 144

[Close]

BLAST of CV190453 vs. Populus trichocarpa peptide v2.0
Match: POPTR_0011s03520.1 ()

HSP 1 Score: 63.929 bits (154), Expect = 9.160e-11
Identity = 33/59 (55.93%), Postives = 40/59 (67.80%), Query Frame = 1

Query:    1 GLTGVSAQDLFLWFPVKGIRVDVPSSGLIYFDVGVVFKQFSVSLFETPRDCLAVEPPEA 177
            GL G+  ++LFLWFPVKG  V+ PSSGLI  D+G+  KQ S SLFE P  C   +P EA
Sbjct:   91 GLEGLIQEELFLWFPVKGFLVNDPSSGLILVDIGLAHKQLSRSLFEVPPVC---KPREA 146

[Close]

BLAST of CV190453 vs. Populus trichocarpa peptide v2.0
Match: POPTR_0004s02910.1 ()

HSP 1 Score: 63.1586 bits (152), Expect = 1.562e-10
Identity = 33/68 (48.53%), Postives = 42/68 (61.76%), Query Frame = 1

Query:    1 GLTGVSAQDLFLWFPVKGIRVDVPSSGLIYFDVGVVFKQFSVSLFETPRDCLAVEPPEAAASKSQYGK 204
            GL G+  ++LFLW PVKG  V+ PSSGLI  D+G+  KQ S SLFE P  C   +P  AA     +G+
Sbjct:   91 GLEGLIQEELFLWLPVKGFEVNDPSSGLISVDIGLAHKQLSRSLFEVPPVC---KPQGAADLLKNFGR 155

[Close]

BLAST of CV190453 vs. P. persica 1.0 peptide
Match: ppa011328m ()

HSP 1 Score: 100.908 bits (250), Expect = 4.840e-22
Identity = 52/82 (63.41%), Postives = 61/82 (74.39%), Query Frame = 1

Query:    4 LTGVSAQDLFLWFPVKGIRVDVPSSGLIYFDVGVVFKQFSVSLFETPRDCLAVEPPEAAAS---KSQYGKLRYRRDPGDFGR 240
            L+G+SAQ+LFLWFPVKGIRVDVPSSG+IYFDVGVV+KQFS+SLFETP  C A      A     + + GKLRY+ D    GR
Sbjct:  131 LSGISAQELFLWFPVKGIRVDVPSSGIIYFDVGVVYKQFSLSLFETPPVCTAATTSVEAIGTVFEGESGKLRYKLDHELVGR 212

[Close]

BLAST of CV190453 vs. P. persica 1.0 peptide
Match: ppa011321m ()

HSP 1 Score: 99.7525 bits (247), Expect = 1.078e-21
Identity = 47/57 (82.46%), Postives = 53/57 (92.98%), Query Frame = 1

Query:    4 LTGVSAQDLFLWFPVKGIRVDVPSSGLIYFDVGVVFKQFSVSLFETPRDCLAVEPPE 174
            L+GVSAQ+LFLWFPVKGIRVDVPSSGLIYFDVGVV KQFS+SLFE+P DC AV+P +
Sbjct:  116 LSGVSAQELFLWFPVKGIRVDVPSSGLIYFDVGVVDKQFSLSLFESPPDCTAVDPSD 172

[Close]

BLAST of CV190453 vs. P. persica 1.0 peptide
Match: ppa012441m ()

HSP 1 Score: 68.1662 bits (165), Expect = 3.477e-12
Identity = 31/51 (60.78%), Postives = 38/51 (74.51%), Query Frame = 1

Query:    1 GLTGVSAQDLFLWFPVKGIRVDVPSSGLIYFDVGVVFKQFSVSLFETPRDC 153
            G+ G++ ++LFLW PVK I VD P SGLI FD+GV  KQ S+SLFE P DC
Sbjct:   97 GVEGLTQEELFLWLPVKDIIVDDPRSGLILFDIGVAHKQLSLSLFEDPPDC 147

[Close]

BLAST of CV190453 vs. P. persica 1.0 peptide
Match: ppa012633m ()

HSP 1 Score: 67.781 bits (164), Expect = 4.541e-12
Identity = 32/51 (62.75%), Postives = 37/51 (72.55%), Query Frame = 1

Query:    1 GLTGVSAQDLFLWFPVKGIRVDVPSSGLIYFDVGVVFKQFSVSLFETPRDC 153
            GL G+  ++LFLW PVKGI V  PSSGLI FD+GV  KQ S+SLFE P  C
Sbjct:   87 GLEGLIQEELFLWLPVKGISVSDPSSGLILFDIGVAHKQLSLSLFEDPPVC 137

[Close]

BLAST of CV190453 vs. TrEMBL
Match: B9SMP1|B9SMP1_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1626990 PE=4 SV=1)

HSP 1 Score: 120.553 bits (301), Expect = 1.013e-25
Identity = 62/93 (66.67%), Postives = 71/93 (76.34%), Query Frame = 1

Query:    4 LTGVSAQDLFLWFPVKGIRVDVPSSGLIYFDVGVVFKQFSVSLFETPRDCLAVEPPE-----------AAASKSQYGKLRYRRDPGDFGRAIL 249
            L+G+SAQ+LFLWFPVKGIRVDVPSSGLIYFDVGVV KQFS+SLFETPRDC AV   +            A SKSQ G+LRY+ D G+FGR +L
Sbjct:   94 LSGISAQELFLWFPVKGIRVDVPSSGLIYFDVGVVSKQFSLSLFETPRDCTAVRDGQFEDIQHGKLIADAVSKSQNGELRYQLDQGNFGRGVL 186

[Close]

BLAST of CV190453 vs. TrEMBL
Match: B9GNH0|B9GNH0_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_553126 PE=4 SV=1)

HSP 1 Score: 111.694 bits (278), Expect = 4.705e-23
Identity = 58/93 (62.37%), Postives = 68/93 (73.12%), Query Frame = 1

Query:    4 LTGVSAQDLFLWFPVKGIRVDVPSSGLIYFDVGVVFKQFSVSLFETPRDCLAVEPPEAAA-----------SKSQYGKLRYRRDPGDFGRAIL 249
            L+G+S+Q+LFLWFPVKGIRVDVPSSGLIYFDVGVVFKQFS+SLFE PRDC+AV   E  A           +KSQ GK+ Y  +  +FGR  L
Sbjct:   89 LSGISSQELFLWFPVKGIRVDVPSSGLIYFDVGVVFKQFSLSLFEMPRDCVAVRNEEIVALRHRKFIADTVAKSQPGKVGYELEQENFGRDFL 181

[Close]

BLAST of CV190453 vs. TrEMBL
Match: D7SPM9|D7SPM9_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_23.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00019067001 PE=4 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 9.810e-21
Identity = 54/94 (57.45%), Postives = 68/94 (72.34%), Query Frame = 1

Query:    1 GLTGVSAQDLFLWFPVKGIRVDVPSSGLIYFDVGVVFKQFSVSLFETPRDCLAV--EPPE----------AAASKSQYGKLRYRRDPGDFGRAI 246
            G++GVSAQ+LFLWFPVKGIRVD+PSSGLIYFDVGV++KQFS+SLFE+P DC  V   PP+          +  S+S+ GKL Y    G+  RA+
Sbjct:   98 GMSGVSAQELFLWFPVKGIRVDIPSSGLIYFDVGVIYKQFSLSLFESPPDCTEVTDSPPQLVFRDGRIVNSELSQSRPGKLGYEAKQGNALRAV 191

[Close]

BLAST of CV190453 vs. TrEMBL
Match: B9IB30|B9IB30_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_573209 PE=4 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 1.281e-20
Identity = 49/60 (81.67%), Postives = 54/60 (90.00%), Query Frame = 1

Query:    4 LTGVSAQDLFLWFPVKGIRVDVPSSGLIYFDVGVVFKQFSVSLFETPRDCLAVEPPEAAA 183
            L+G+SAQ+LFLWFPVKGIRVDVPSSGLIYFDVGVVFKQFS+SLFE PRDC+AV   E  A
Sbjct:   92 LSGISAQELFLWFPVKGIRVDVPSSGLIYFDVGVVFKQFSLSLFEMPRDCVAVRDEEIEA 151

[Close]

BLAST of CV190453 vs. TrEMBL
Match: A5B6T5|A5B6T5_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_040145 PE=4 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 4.869e-20
Identity = 53/94 (56.38%), Postives = 67/94 (71.28%), Query Frame = 1

Query:    1 GLTGVSAQDLFLWFPVKGIRVDVPSSGLIYFDVGVVFKQFSVSLFETPRDCLAV--EPPE----------AAASKSQYGKLRYRRDPGDFGRAI 246
            G++GVSAQ+LFLWFPVKGIRVD+PSSGLIYFDVGV++KQFS+SLFE+P DC  V   PP+          +  S+S+ G L Y    G+  RA+
Sbjct:   98 GMSGVSAQELFLWFPVKGIRVDIPSSGLIYFDVGVIYKQFSLSLFESPPDCTEVTDSPPQLVFRDGRIVNSELSQSRPGXLGYEAKQGNALRAV 191

[Close]

BLAST of CV190453 vs. TrEMBL
Match: A5BBX0|A5BBX0_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_016695 PE=4 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 3.156e-19
Identity = 47/57 (82.46%), Postives = 52/57 (91.23%), Query Frame = 1

Query:    4 LTGVSAQDLFLWFPVKGIRVDVPSSGLIYFDVGVVFKQFSVSLFETPRDCLAVEPPE 174
            L+G+SAQ+LFLWFPVKGIRVDVPSSGLIYFDVGVVFKQFS+SLFETP +C AV   E
Sbjct:   94 LSGISAQELFLWFPVKGIRVDVPSSGLIYFDVGVVFKQFSLSLFETPPNCKAVRGDE 150

[Close]

BLAST of CV190453 vs. TrEMBL
Match: Q9SRR9|Q9SRR9_ARATH (F21O3.18 protein OS=Arabidopsis thaliana GN=F21O3.18 PE=4 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 9.182e-19
Identity = 45/53 (84.91%), Postives = 51/53 (96.23%), Query Frame = 1

Query:    4 LTGVSAQDLFLWFPVKGIRVDVPSSGLIYFDVGVVFKQFSVSLFETPRDCLAV 162
            L+G+SAQ+LFLWFPVKGIRVDVPSSGLIYFDVGVV KQ+S+SLFETPRDC+ V
Sbjct:   95 LSGISAQELFLWFPVKGIRVDVPSSGLIYFDVGVVRKQYSLSLFETPRDCVPV 147

[Close]

BLAST of CV190453 vs. TrEMBL
Match: Q94AG1|Q94AG1_ARATH (AT3g07470/F21O3_18 OS=Arabidopsis thaliana GN=At3g07470 PE=2 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 9.182e-19
Identity = 45/53 (84.91%), Postives = 51/53 (96.23%), Query Frame = 1

Query:    4 LTGVSAQDLFLWFPVKGIRVDVPSSGLIYFDVGVVFKQFSVSLFETPRDCLAV 162
            L+G+SAQ+LFLWFPVKGIRVDVPSSGLIYFDVGVV KQ+S+SLFETPRDC+ V
Sbjct:   95 LSGISAQELFLWFPVKGIRVDVPSSGLIYFDVGVVRKQYSLSLFETPRDCVPV 147

[Close]

BLAST of CV190453 vs. TrEMBL
Match: D7L6L0|D7L6L0_ARALY (Putative uncharacterized protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_478066 PE=4 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 9.182e-19
Identity = 45/53 (84.91%), Postives = 51/53 (96.23%), Query Frame = 1

Query:    4 LTGVSAQDLFLWFPVKGIRVDVPSSGLIYFDVGVVFKQFSVSLFETPRDCLAV 162
            L+G+SAQ+LFLWFPVKGIRVDVPSSGLIYFDVGVV KQ+S+SLFETPRDC+ V
Sbjct:   94 LSGISAQELFLWFPVKGIRVDVPSSGLIYFDVGVVRKQYSLSLFETPRDCVPV 146

[Close]

BLAST of CV190453 vs. TrEMBL
Match: D7L6K9|D7L6K9_ARALY (Putative uncharacterized protein (Fragment) OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_478064 PE=4 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 1.566e-18
Identity = 44/53 (83.02%), Postives = 52/53 (98.11%), Query Frame = 1

Query:    4 LTGVSAQDLFLWFPVKGIRVDVPSSGLIYFDVGVVFKQFSVSLFETPRDCLAV 162
            L+G+SAQ+LFLWFPVKGIRVDVPSSGLI+FDVGV+ KQ+S+SLFETPRDC+AV
Sbjct:   91 LSGISAQELFLWFPVKGIRVDVPSSGLIFFDVGVLRKQYSLSLFETPRDCVAV 143

[Close]

BLAST of CV190453 vs. Vitis vinifera peptide
Match: GSVIVT01019067001 (assembled CDS)

HSP 1 Score: 103.99 bits (258), Expect = 4.889e-23
Identity = 54/94 (57.45%), Postives = 68/94 (72.34%), Query Frame = 1

Query:    1 GLTGVSAQDLFLWFPVKGIRVDVPSSGLIYFDVGVVFKQFSVSLFETPRDCLAV--EPPE----------AAASKSQYGKLRYRRDPGDFGRAI 246
            G++GVSAQ+LFLWFPVKGIRVD+PSSGLIYFDVGV++KQFS+SLFE+P DC  V   PP+          +  S+S+ GKL Y    G+  RA+
Sbjct:   98 GMSGVSAQELFLWFPVKGIRVDIPSSGLIYFDVGVIYKQFSLSLFESPPDCTEVTDSPPQLVFRDGRIVNSELSQSRPGKLGYEAKQGNALRAV 191

[Close]

BLAST of CV190453 vs. Vitis vinifera peptide
Match: GSVIVT01014548001 (assembled CDS)

HSP 1 Score: 68.1662 bits (165), Expect = 2.973e-12
Identity = 30/51 (58.82%), Postives = 39/51 (76.47%), Query Frame = 1

Query:    1 GLTGVSAQDLFLWFPVKGIRVDVPSSGLIYFDVGVVFKQFSVSLFETPRDC 153
            G+ G++ ++LFLW PVK I VD P+SGLI FD+G+  KQ S+SLFE P DC
Sbjct:   84 GVVGLTQEELFLWLPVKDIIVDDPNSGLILFDIGLAHKQLSLSLFEDPPDC 134

[Close]

BLAST of CV190453 vs. Vitis vinifera peptide
Match: GSVIVT01005299001 (assembled CDS)

HSP 1 Score: 64.3142 bits (155), Expect = 4.293e-11
Identity = 29/51 (56.86%), Postives = 38/51 (74.51%), Query Frame = 1

Query:    1 GLTGVSAQDLFLWFPVKGIRVDVPSSGLIYFDVGVVFKQFSVSLFETPRDC 153
            G+ G++ ++LFLW PVK I VD P+SGLI FD+G+  KQ S+SLFE P  C
Sbjct:   84 GVEGLTQEELFLWLPVKDIIVDDPNSGLILFDIGLAHKQLSLSLFEDPPVC 134

[Close]

BLAST of CV190453 vs. Vitis vinifera peptide
Match: GSVIVT01005275001 (assembled CDS)

HSP 1 Score: 64.3142 bits (155), Expect = 4.293e-11
Identity = 29/51 (56.86%), Postives = 38/51 (74.51%), Query Frame = 1

Query:    1 GLTGVSAQDLFLWFPVKGIRVDVPSSGLIYFDVGVVFKQFSVSLFETPRDC 153
            G+ G++ ++LFLW PVK I VD P+SGLI FD+G+  KQ S+SLFE P  C
Sbjct:   84 GVEGLTQEELFLWLPVKDIIVDDPNSGLILFDIGLAHKQLSLSLFEDPPVC 134

[Close]

BLAST of CV190453 vs. TAIR peptide
Match: AT3G07470.1 (| Symbols: | Protein of unknown function, DUF538 | chr3:2387291-2388343 REVERSE LENGTH=169)

HSP 1 Score: 97.4413 bits (241), Expect = 6.584e-21
Identity = 45/53 (84.91%), Postives = 51/53 (96.23%), Query Frame = 1

Query:    4 LTGVSAQDLFLWFPVKGIRVDVPSSGLIYFDVGVVFKQFSVSLFETPRDCLAV 162
            L+G+SAQ+LFLWFPVKGIRVDVPSSGLIYFDVGVV KQ+S+SLFETPRDC+ V
Sbjct:   95 LSGISAQELFLWFPVKGIRVDVPSSGLIYFDVGVVRKQYSLSLFETPRDCVPV 147

[Close]

BLAST of CV190453 vs. TAIR peptide
Match: AT3G07460.2 (| Symbols: | Protein of unknown function, DUF538 | chr3:2384544-2385617 REVERSE LENGTH=271)

HSP 1 Score: 91.2781 bits (225), Expect = 4.718e-19
Identity = 42/53 (79.25%), Postives = 50/53 (94.34%), Query Frame = 1

Query:    4 LTGVSAQDLFLWFPVKGIRVDVPSSGLIYFDVGVVFKQFSVSLFETPRDCLAV 162
            L+G+SAQ+LFLW  VKGIRVDVPSSGLI+FDVGV+ KQ+S+SLFETPRDC+AV
Sbjct:   94 LSGISAQELFLWLQVKGIRVDVPSSGLIFFDVGVLRKQYSLSLFETPRDCVAV 146

[Close]

BLAST of CV190453 vs. TAIR peptide
Match: AT3G07460.1 (| Symbols: | Protein of unknown function, DUF538 | chr3:2384837-2385617 REVERSE LENGTH=177)

HSP 1 Score: 91.2781 bits (225), Expect = 4.718e-19
Identity = 42/53 (79.25%), Postives = 50/53 (94.34%), Query Frame = 1

Query:    4 LTGVSAQDLFLWFPVKGIRVDVPSSGLIYFDVGVVFKQFSVSLFETPRDCLAV 162
            L+G+SAQ+LFLW  VKGIRVDVPSSGLI+FDVGV+ KQ+S+SLFETPRDC+AV
Sbjct:   94 LSGISAQELFLWLQVKGIRVDVPSSGLIFFDVGVLRKQYSLSLFETPRDCVAV 146

[Close]

BLAST of CV190453 vs. TAIR peptide
Match: AT5G16380.1 (| Symbols: | Protein of unknown function, DUF538 | chr5:5359730-5360613 REVERSE LENGTH=195)

HSP 1 Score: 79.337 bits (194), Expect = 1.855e-15
Identity = 39/64 (60.94%), Postives = 47/64 (73.44%), Query Frame = 1

Query:    4 LTGVSAQDLFLWFPVKGIRVDVPSSGLIYFDVGVVFKQFSVSLFETPRDCLAVEPPEAAASKSQ 195
            L+GV+ ++LFLWF VKGI VD  SSGLI+FDVGV  KQ S+SLFE+PRDC A E    A   S+
Sbjct:   95 LSGVTQKELFLWFAVKGIHVDPQSSGLIHFDVGVADKQLSLSLFESPRDCTAAESQPRAVDLSR 158

[Close]

BLAST of CV190453 vs. TAIR peptide
Match: AT1G61667.1 (| Symbols: | Protein of unknown function, DUF538 | chr1:22767674-22768269 FORWARD LENGTH=156)

HSP 1 Score: 69.707 bits (169), Expect = 1.470e-12
Identity = 35/69 (50.72%), Postives = 45/69 (65.22%), Query Frame = 1

Query:    1 GLTGVSAQDLFLWFPVKGIRVDVPSSGLIYFDVGVVFKQFSVSLFETPRDCLAVEPPEAAASKSQYGKL 207
            GL G++ ++LFLW PVKGI V+ PSSGL+ FD+GV  KQ S SLFE P  C    PP +   K +  K+
Sbjct:   85 GLEGLTQEELFLWLPVKGIAVNDPSSGLVLFDIGVAHKQISRSLFEDPPVCY---PPGSIMEKLEKSKM 150

[Close]

BLAST of CV190453 vs. TAIR peptide
Match: AT5G54530.1 (| Symbols: | Protein of unknown function, DUF538 | chr5:22152781-22154201 FORWARD LENGTH=161)

HSP 1 Score: 64.3142 bits (155), Expect = 6.176e-11
Identity = 35/76 (46.05%), Postives = 46/76 (60.53%), Query Frame = 1

Query:    1 GLTGVSAQDLFLWFPVKGIRVDVPSSGLIYFDVGVVFKQFSVSLFETPRDCLAVEPPEAAASKSQYGKLRYRRDPG 228
            G+ G+S ++LFLW  VK I V+ P+SG+I FD+GV FKQ S+SLFE P  C     P+    K      + RRD G
Sbjct:   91 GVEGLSQKELFLWLQVKDIVVENPNSGVIVFDIGVAFKQLSLSLFEDPPKC----KPDGVLKK------KMRRDRG 156

The following BLAST results are available for this feature:

BLAST of CV190453 vs. Populus trichocarpa peptide v2.0
BLAST of CV190453 vs. P. persica 1.0 peptide
BLAST of CV190453 vs. TrEMBL
BLAST of CV190453 vs. Vitis vinifera peptide
BLAST of CV190453 vs. TAIR peptide

BLAST of CV190453 vs. Populus trichocarpa peptide v2.0
Analysis Date: 2011-01-18 (BLAST: Vaccinium corymbosum unigene v1 vs Populus trichocarpa v2.0 peptide)
Total hits: 6


Match Name	E-value	Identity
POPTR_0014s17600.1	4.093e-27	66.67	[more]
POPTR_0002s24000.1	3.831e-25	62.37	[more]
POPTR_0011s13350.1	3.719e-12	60.78	[more]
POPTR_0001s44000.1	4.857e-12	60.78	[more]
POPTR_0011s03520.1	9.160e-11	55.93	[more]
POPTR_0004s02910.1	1.562e-10	48.53	[more]

BLAST of CV190453 vs. P. persica 1.0 peptide
Analysis Date: 2011-01-18 (BLAST: Vaccinium corymbosum unigene v1 vs Ppersica v1.0 peptide)
Total hits: 4


Match Name	E-value	Identity
ppa011328m	4.840e-22	63.41	[more]
ppa011321m	1.078e-21	82.46	[more]
ppa012441m	3.477e-12	60.78	[more]
ppa012633m	4.541e-12	62.75	[more]

BLAST of CV190453 vs. TrEMBL
Analysis Date: 2011-01-18 (BLAST: Vaccinium corymbosum unigene v1 vs TrEMBL)
Total hits: 10


Match Name	E-value	Identity	Description
B9SMP1\|B9SMP1_RICCO	1.013e-25	66.67	Putative uncharacterized protein OS=Ricinus commun...	[more]
B9GNH0\|B9GNH0_POPTR	4.705e-23	62.37	Predicted protein OS=Populus trichocarpa GN=POPTRD...	[more]
D7SPM9\|D7SPM9_VITVI	9.810e-21	57.45	Whole genome shotgun sequence of line PN40024, sca...	[more]
B9IB30\|B9IB30_POPTR	1.281e-20	81.67	Predicted protein OS=Populus trichocarpa GN=POPTRD...	[more]
A5B6T5\|A5B6T5_VITVI	4.869e-20	56.38	Putative uncharacterized protein OS=Vitis vinifera...	[more]
A5BBX0\|A5BBX0_VITVI	3.156e-19	82.46	Putative uncharacterized protein OS=Vitis vinifera...	[more]
Q9SRR9\|Q9SRR9_ARATH	9.182e-19	84.91	F21O3.18 protein OS=Arabidopsis thaliana GN=F21O3....	[more]
Q94AG1\|Q94AG1_ARATH	9.182e-19	84.91	AT3g07470/F21O3_18 OS=Arabidopsis thaliana GN=At3g...	[more]
D7L6L0\|D7L6L0_ARALY	9.182e-19	84.91	Putative uncharacterized protein OS=Arabidopsis ly...	[more]
D7L6K9\|D7L6K9_ARALY	1.566e-18	83.02	Putative uncharacterized protein (Fragment) OS=Ara...	[more]

BLAST of CV190453 vs. Vitis vinifera peptide
Analysis Date: 2011-01-25 (BLAST: Vaccinium corymbosum unigene v1 vs Vitis vinifera peptide)
Total hits: 4


Match Name	E-value	Identity	Description
GSVIVT01019067001	4.889e-23	57.45	assembled CDS	[more]
GSVIVT01014548001	2.973e-12	58.82	assembled CDS	[more]
GSVIVT01005299001	4.293e-11	56.86	assembled CDS	[more]
GSVIVT01005275001	4.293e-11	56.86	assembled CDS	[more]

BLAST of CV190453 vs. TAIR peptide
Analysis Date: 2011-02-10 (BLAST: Vaccinium corymbosum unigene v1 vs TAIR 10 peptide)
Total hits: 6


Match Name	E-value	Identity	Description
AT3G07470.1	6.584e-21	84.91	\| Symbols: \| Protein of unknown function, DUF538 ...	[more]
AT3G07460.2	4.718e-19	79.25	\| Symbols: \| Protein of unknown function, DUF538 ...	[more]
AT3G07460.1	4.718e-19	79.25	\| Symbols: \| Protein of unknown function, DUF538 ...	[more]
AT5G16380.1	1.855e-15	60.94	\| Symbols: \| Protein of unknown function, DUF538 ...	[more]
AT1G61667.1	1.470e-12	50.72	\| Symbols: \| Protein of unknown function, DUF538 ...	[more]
AT5G54530.1	6.176e-11	46.05	\| Symbols: \| Protein of unknown function, DUF538 ...	[more]

InterPro

Analysis Name: InterProScan analysis for Vaccinium corymbosum unigene v1
Date Performed: 2011-01-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR007493	Protein of unknown function DUF538	GENE3D	2.30.240.10	no description	coord: 2..54 score: 3.8
IPR007493	Protein of unknown function DUF538	PFAM	PF04398	DUF538	coord: 2..47 score: 2.3
None	No IPR available	SUPERFAMILY	141562	At5g01610-like	coord: 1..57 score: 4.3

Properties


Property Name	Value
Singlet in analysis	Vaccinium corymbosum unigene v1

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>CV190453 ID=CV190453; Name=CV190453; organism=Vaccinium corymbosum; type=EST; length=635bp
GGTTTGACCGGAGTTTCGGCTCAGGATTTGTTCCTCTGGTTCCCTGTGAA
GGGAATTCGGGTCGATGTGCCGAGCTCCGGGTTGATTTATTTTGATGTGG
GTGTTGTTTTTAAGCAATTCTCTGTTTCTCTTTTCGAAACACCGAGGGAT
TGTCTGGCGGTGGAGCCCCCTGAAGCTGCTGCGTCTAAGAGTCAATATGG
CAAGCTAAGATATCGGCGCGATCCGGGTGATTTCGGGAGGGCTATTTTAT
AGGGATTCGCCGCAGGAAAAATGATTCAAATCGCTCAATTTCCTCGATCG
CTACATGAGGGTTCTTCCCATTTTCTGTTCGTAGATGAATTTCTGCAGAG
AAAGAGTCCGGTAGAAAGGTCATATGGTTCCATTTCAGTGTGCTTTCTTT
CGGTTTTCTTTACTAGTAATTGTATAGCTCAATGTCAACATAACACTGTG
GTACGTACCTTACTGCATTCGATTTGAGAAGAAAGGATTCGTAAAGAAAA
GCTATGGGAAGTGATCAGATTATTTCATACAGATGAGAAAATTACAGAAT
GAGACAGCAGAAGCATTGGAAATTAAGAGGGGGTTAATTTCAGGTGGTAA
AATTTGGAAAAGTTGCGTAATTGTATATTGAGAGA

Annotated Terms

The following terms have been associated with this EST:

Vocabulary: **INTERPRO**
Term	Definition
IPR007493	DUF538
noIPR	unintegrated