DR067996 | GDV

EST Overview


Name	DR067996
Unique Name	DR067996
Type	EST
Organism	Vaccinium corymbosum (northern highbush blueberry)
Sequence length	476

Libraries


Library Name	Type
LIBEST_016374 Vco01	cdna_library

Unigenes

This EST is part of the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
	Vaccinium corymbosum unigene v1	EST

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
Vaccinium corymbosum unigene v1	2011-01-18
BLAST: Vaccinium corymbosum unigene v1 vs Swissprot	2011-01-18
BLAST: Vaccinium corymbosum unigene v1 vs Populus trichocarpa v2.0 peptide	2011-01-18
BLAST: Vaccinium corymbosum unigene v1 vs TrEMBL	2011-01-18
BLAST: Vaccinium corymbosum unigene v1 vs Vitis vinifera peptide	2011-01-25
BLAST: Vaccinium corymbosum unigene v1 vs TAIR 10 peptide	2011-02-10
InterProScan analysis for Vaccinium corymbosum unigene v1	2011-01-18

Homology

[Close]

BLAST of DR067996 vs. DB:swissprot:display
Match: IF1A_ONOVI (Eukaryotic translation initiation factor 1A OS=Onobrychis viciifolia PE=2 SV=2)

HSP 1 Score: 132.494 bits (332), Expect = 9.434e-31
Identity = 61/66 (92.42%), Postives = 64/66 (96.97%), Query Frame = -2

Query:  275 CIDGTKRLCHIRGKMHKKVWIPSGDIVLVGLRDYQDDKADVILKYMPDEARLLKAYGELPENTRLN 472
            CIDGTKRLCHIRGKMHKKVWI +GDI+LVGLRDYQDDKADVILK MPDEARLLKAYGELP+NTRLN
Sbjct:   51 CIDGTKRLCHIRGKMHKKVWIAAGDIILVGLRDYQDDKADVILKLMPDEARLLKAYGELPDNTRLN 116

[Close]

BLAST of DR067996 vs. DB:swissprot:display
Match: IF1A_WHEAT (Eukaryotic translation initiation factor 1A OS=Triticum aestivum PE=1 SV=2)

HSP 1 Score: 127.872 bits (320), Expect = 2.324e-29
Identity = 59/66 (89.39%), Postives = 62/66 (93.94%), Query Frame = -2

Query:  275 CIDGTKRLCHIRGKMHKKVWIPSGDIVLVGLRDYQDDKADVILKYMPDEARLLKAYGELPENTRLN 472
            C+DGTKRLCHIRGKMHKKVWI +GDIVLVGLRDYQDDKADVILKYM DEARLLKAYGELP+  RLN
Sbjct:   51 CVDGTKRLCHIRGKMHKKVWIAAGDIVLVGLRDYQDDKADVILKYMNDEARLLKAYGELPDTVRLN 116

[Close]

BLAST of DR067996 vs. DB:swissprot:display
Match: IF1AY_PANTR (Eukaryotic translation initiation factor 1A, Y-chromosomal OS=Pan troglodytes GN=EIF1AY PE=2 SV=3)

HSP 1 Score: 110.538 bits (275), Expect = 3.839e-24
Identity = 50/66 (75.76%), Postives = 57/66 (86.36%), Query Frame = -2

Query:  275 CIDGTKRLCHIRGKMHKKVWIPSGDIVLVGLRDYQDDKADVILKYMPDEARLLKAYGELPENTRLN 472
            C DG KRLCHIRGK+ KKVWI + DI+LVGLRDYQD+KADVILKY  DEAR LKAYGELPE+ ++N
Sbjct:   51 CFDGVKRLCHIRGKLRKKVWINTSDIILVGLRDYQDNKADVILKYNADEARSLKAYGELPEHAKIN 116

[Close]

BLAST of DR067996 vs. DB:swissprot:display
Match: IF1AY_HUMAN (Eukaryotic translation initiation factor 1A, Y-chromosomal OS=Homo sapiens GN=EIF1AY PE=1 SV=4)

HSP 1 Score: 110.538 bits (275), Expect = 3.839e-24
Identity = 50/66 (75.76%), Postives = 57/66 (86.36%), Query Frame = -2

Query:  275 CIDGTKRLCHIRGKMHKKVWIPSGDIVLVGLRDYQDDKADVILKYMPDEARLLKAYGELPENTRLN 472
            C DG KRLCHIRGK+ KKVWI + DI+LVGLRDYQD+KADVILKY  DEAR LKAYGELPE+ ++N
Sbjct:   51 CFDGVKRLCHIRGKLRKKVWINTSDIILVGLRDYQDNKADVILKYNADEARSLKAYGELPEHAKIN 116

[Close]

BLAST of DR067996 vs. DB:swissprot:display
Match: IF1AX_PONAB (Eukaryotic translation initiation factor 1A, X-chromosomal OS=Pongo abelii GN=EIF1AX PE=2 SV=3)

HSP 1 Score: 110.538 bits (275), Expect = 3.839e-24
Identity = 50/66 (75.76%), Postives = 57/66 (86.36%), Query Frame = -2

Query:  275 CIDGTKRLCHIRGKMHKKVWIPSGDIVLVGLRDYQDDKADVILKYMPDEARLLKAYGELPENTRLN 472
            C DG KRLCHIRGK+ KKVWI + DI+LVGLRDYQD+KADVILKY  DEAR LKAYGELPE+ ++N
Sbjct:   51 CFDGVKRLCHIRGKLRKKVWINTSDIILVGLRDYQDNKADVILKYNADEARSLKAYGELPEHAKIN 116

[Close]

BLAST of DR067996 vs. DB:swissprot:display
Match: IF1AX_MOUSE (Eukaryotic translation initiation factor 1A, X-chromosomal OS=Mus musculus GN=Eif1ay PE=2 SV=3)

HSP 1 Score: 110.538 bits (275), Expect = 3.839e-24
Identity = 50/66 (75.76%), Postives = 57/66 (86.36%), Query Frame = -2

Query:  275 CIDGTKRLCHIRGKMHKKVWIPSGDIVLVGLRDYQDDKADVILKYMPDEARLLKAYGELPENTRLN 472
            C DG KRLCHIRGK+ KKVWI + DI+LVGLRDYQD+KADVILKY  DEAR LKAYGELPE+ ++N
Sbjct:   51 CFDGVKRLCHIRGKLRKKVWINTSDIILVGLRDYQDNKADVILKYNADEARSLKAYGELPEHAKIN 116

[Close]

BLAST of DR067996 vs. DB:swissprot:display
Match: IF1AX_HUMAN (Eukaryotic translation initiation factor 1A, X-chromosomal OS=Homo sapiens GN=EIF1AX PE=1 SV=2)

HSP 1 Score: 110.538 bits (275), Expect = 3.839e-24
Identity = 50/66 (75.76%), Postives = 57/66 (86.36%), Query Frame = -2

Query:  275 CIDGTKRLCHIRGKMHKKVWIPSGDIVLVGLRDYQDDKADVILKYMPDEARLLKAYGELPENTRLN 472
            C DG KRLCHIRGK+ KKVWI + DI+LVGLRDYQD+KADVILKY  DEAR LKAYGELPE+ ++N
Sbjct:   51 CFDGVKRLCHIRGKLRKKVWINTSDIILVGLRDYQDNKADVILKYNADEARSLKAYGELPEHAKIN 116

[Close]

BLAST of DR067996 vs. DB:swissprot:display
Match: IF1A_RAT (Eukaryotic translation initiation factor 1A OS=Rattus norvegicus GN=Eif1a PE=2 SV=3)

HSP 1 Score: 108.997 bits (271), Expect = 1.117e-23
Identity = 48/66 (72.73%), Postives = 57/66 (86.36%), Query Frame = -2

Query:  275 CIDGTKRLCHIRGKMHKKVWIPSGDIVLVGLRDYQDDKADVILKYMPDEARLLKAYGELPENTRLN 472
            C DG +RLCHIRGK+ KKVWI + DI+L+GLRDYQD+KADVILKY  DEAR LKAYGELPE+ ++N
Sbjct:   51 CFDGVRRLCHIRGKLRKKVWINTSDIILIGLRDYQDNKADVILKYNADEARSLKAYGELPEHAKIN 116

[Close]

BLAST of DR067996 vs. DB:swissprot:display
Match: IF1A_MOUSE (Eukaryotic translation initiation factor 1A OS=Mus musculus GN=Eif1a PE=2 SV=3)

HSP 1 Score: 108.997 bits (271), Expect = 1.117e-23
Identity = 48/66 (72.73%), Postives = 57/66 (86.36%), Query Frame = -2

Query:  275 CIDGTKRLCHIRGKMHKKVWIPSGDIVLVGLRDYQDDKADVILKYMPDEARLLKAYGELPENTRLN 472
            C DG +RLCHIRGK+ KKVWI + DI+L+GLRDYQD+KADVILKY  DEAR LKAYGELPE+ ++N
Sbjct:   51 CFDGVRRLCHIRGKLRKKVWINTSDIILIGLRDYQDNKADVILKYNADEARSLKAYGELPEHAKIN 116

[Close]

BLAST of DR067996 vs. DB:swissprot:display
Match: IF1A_RABIT (Eukaryotic translation initiation factor 1A OS=Oryctolagus cuniculus GN=EIF1A PE=1 SV=2)

HSP 1 Score: 101.293 bits (251), Expect = 2.329e-21
Identity = 47/64 (73.44%), Postives = 55/64 (85.94%), Query Frame = -2

Query:  275 DGTKRLCHIRGKMHKKVWIPSGDIVLVGLRDYQDDKADVILKYMPDEARLLKAYGELPENTRLN 466
            DG KRL HIRGK+ KKVWI + DI+LVGLR+YQD+KADVILKY  DEAR LKAYGELPE+ ++N
Sbjct:   53 DGVKRLFHIRGKLRKKVWINTSDIILVGLREYQDNKADVILKYNADEARSLKAYGELPEHAKIN 116

[Close]

BLAST of DR067996 vs. Populus trichocarpa peptide v2.0
Match: POPTR_0002s21870.1 ()

HSP 1 Score: 138.658 bits (348), Expect = 1.693e-33
Identity = 64/67 (95.52%), Postives = 66/67 (98.51%), Query Frame = -2

Query:  275 TCIDGTKRLCHIRGKMHKKVWIPSGDIVLVGLRDYQDDKADVILKYMPDEARLLKAYGELPENTRLN 475
            TCIDGTKRLCHIRGKMHKKVWI +GDI+LVGLRDYQDDKADVILKYMPDEARLLKAYGELPENTRLN
Sbjct:   50 TCIDGTKRLCHIRGKMHKKVWIAAGDIILVGLRDYQDDKADVILKYMPDEARLLKAYGELPENTRLN 116

[Close]

BLAST of DR067996 vs. Populus trichocarpa peptide v2.0
Match: POPTR_0014s15910.1 ()

HSP 1 Score: 136.732 bits (343), Expect = 6.432e-33
Identity = 63/66 (95.45%), Postives = 65/66 (98.48%), Query Frame = -2

Query:  275 CIDGTKRLCHIRGKMHKKVWIPSGDIVLVGLRDYQDDKADVILKYMPDEARLLKAYGELPENTRLN 472
            CIDGTKRLCHIRGKMHKKVWI +GDI+LVGLRDYQDDKADVILKYMPDEARLLKAYGELPENTRLN
Sbjct:   51 CIDGTKRLCHIRGKMHKKVWIAAGDIILVGLRDYQDDKADVILKYMPDEARLLKAYGELPENTRLN 116

[Close]

BLAST of DR067996 vs. Populus trichocarpa peptide v2.0
Match: POPTR_0002s03310.1 ()

HSP 1 Score: 119.013 bits (297), Expect = 1.388e-27
Identity = 54/66 (81.82%), Postives = 59/66 (89.39%), Query Frame = -2

Query:  275 CIDGTKRLCHIRGKMHKKVWIPSGDIVLVGLRDYQDDKADVILKYMPDEARLLKAYGELPENTRLN 472
            C DGTKRLCHIRGKMH+KVWI +GDI+LVGLRDYQD KAD+ILKY   EARLLKAYGELP NTR+N
Sbjct:   51 CFDGTKRLCHIRGKMHRKVWIDAGDIILVGLRDYQDHKADIILKYWTYEARLLKAYGELPANTRIN 116

[Close]

BLAST of DR067996 vs. Populus trichocarpa peptide v2.0
Match: POPTR_0014s08950.1 ()

HSP 1 Score: 84.3445 bits (207), Expect = 3.788e-17
Identity = 40/53 (75.47%), Postives = 44/53 (83.02%), Query Frame = -2

Query:  275 KMHKKVWIPSGDIVLVGLRDYQDDKADVILKYMPDEARLLKAYGELPENTRLN 433
            K  KKVWI +GDI+LVGL DYQDDK DVILK+MPDEA LLKAYGELP   +LN
Sbjct:   38 KDDKKVWIAAGDIILVGLSDYQDDKVDVILKHMPDEAMLLKAYGELPVKIKLN 90

[Close]

BLAST of DR067996 vs. TrEMBL
Match: A9PE28|A9PE28_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_645034 PE=2 SV=1)

HSP 1 Score: 138.658 bits (348), Expect = 1.862e-31
Identity = 64/67 (95.52%), Postives = 66/67 (98.51%), Query Frame = -2

Query:  275 TCIDGTKRLCHIRGKMHKKVWIPSGDIVLVGLRDYQDDKADVILKYMPDEARLLKAYGELPENTRLN 475
            TCIDGTKRLCHIRGKMHKKVWI +GDI+LVGLRDYQDDKADVILKYMPDEARLLKAYGELPENTRLN
Sbjct:   50 TCIDGTKRLCHIRGKMHKKVWIAAGDIILVGLRDYQDDKADVILKYMPDEARLLKAYGELPENTRLN 116

[Close]

BLAST of DR067996 vs. TrEMBL
Match: Q2XTB8|Q2XTB8_SOLTU (Putative translation initiation factor eIF-1A-like OS=Solanum tuberosum PE=2 SV=1)

HSP 1 Score: 137.117 bits (344), Expect = 5.418e-31
Identity = 64/66 (96.97%), Postives = 65/66 (98.48%), Query Frame = -2

Query:  275 CIDGTKRLCHIRGKMHKKVWIPSGDIVLVGLRDYQDDKADVILKYMPDEARLLKAYGELPENTRLN 472
            CIDGTKRLCHIRGKMHKKVWI +GDIVLVGLRDYQDDKADVILKYMPDEARLLKAYGELPENTRLN
Sbjct:   51 CIDGTKRLCHIRGKMHKKVWIAAGDIVLVGLRDYQDDKADVILKYMPDEARLLKAYGELPENTRLN 116

[Close]

BLAST of DR067996 vs. TrEMBL
Match: A9PCD3|A9PCD3_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_732377 PE=2 SV=1)

HSP 1 Score: 136.732 bits (343), Expect = 7.076e-31
Identity = 63/66 (95.45%), Postives = 65/66 (98.48%), Query Frame = -2

Query:  275 CIDGTKRLCHIRGKMHKKVWIPSGDIVLVGLRDYQDDKADVILKYMPDEARLLKAYGELPENTRLN 472
            CIDGTKRLCHIRGKMHKKVWI +GDI+LVGLRDYQDDKADVILKYMPDEARLLKAYGELPENTRLN
Sbjct:   51 CIDGTKRLCHIRGKMHKKVWIAAGDIILVGLRDYQDDKADVILKYMPDEARLLKAYGELPENTRLN 116

[Close]

BLAST of DR067996 vs. TrEMBL
Match: A5BQH0|A5BQH0_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_021007 PE=3 SV=1)

HSP 1 Score: 136.732 bits (343), Expect = 7.076e-31
Identity = 63/66 (95.45%), Postives = 65/66 (98.48%), Query Frame = -2

Query:  275 CIDGTKRLCHIRGKMHKKVWIPSGDIVLVGLRDYQDDKADVILKYMPDEARLLKAYGELPENTRLN 472
            CIDGTKRLCHIRGKMHKKVWI +GDI+LVGLRDYQDDKADVILKYMPDEARLLKAYGELPENTRLN
Sbjct:   51 CIDGTKRLCHIRGKMHKKVWIAAGDIILVGLRDYQDDKADVILKYMPDEARLLKAYGELPENTRLN 116

[Close]

BLAST of DR067996 vs. TrEMBL
Match: A9NLE4|A9NLE4_PICSI (Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1)

HSP 1 Score: 135.191 bits (339), Expect = 2.059e-30
Identity = 63/66 (95.45%), Postives = 64/66 (96.97%), Query Frame = -2

Query:  275 CIDGTKRLCHIRGKMHKKVWIPSGDIVLVGLRDYQDDKADVILKYMPDEARLLKAYGELPENTRLN 472
            CIDGTKRLCHIRGKMHKKVWI +GDIVLVGLRDYQDDKADVILKYMPDEARLLKAYGELPEN RLN
Sbjct:   51 CIDGTKRLCHIRGKMHKKVWIAAGDIVLVGLRDYQDDKADVILKYMPDEARLLKAYGELPENVRLN 116

[Close]

BLAST of DR067996 vs. TrEMBL
Match: B9SSH7|B9SSH7_RICCO (Eif-1a, putative OS=Ricinus communis GN=RCOM_0510890 PE=3 SV=1)

HSP 1 Score: 134.806 bits (338), Expect = 2.689e-30
Identity = 62/66 (93.94%), Postives = 65/66 (98.48%), Query Frame = -2

Query:  275 CIDGTKRLCHIRGKMHKKVWIPSGDIVLVGLRDYQDDKADVILKYMPDEARLLKAYGELPENTRLN 472
            CIDGTKRLCHIRGKMHKKVWI +GDI+LVGLRDYQDDKADVILKYMPDEARLLKAYGELPE+TRLN
Sbjct:   51 CIDGTKRLCHIRGKMHKKVWIAAGDIILVGLRDYQDDKADVILKYMPDEARLLKAYGELPESTRLN 116

[Close]

BLAST of DR067996 vs. TrEMBL
Match: Q9SJB9|Q9SJB9_ARATH (Putative translation initiation factor eIF-1A OS=Arabidopsis thaliana GN=At2g04520 PE=2 SV=1)

HSP 1 Score: 134.035 bits (336), Expect = 4.586e-30
Identity = 63/66 (95.45%), Postives = 64/66 (96.97%), Query Frame = -2

Query:  275 CIDGTKRLCHIRGKMHKKVWIPSGDIVLVGLRDYQDDKADVILKYMPDEARLLKAYGELPENTRLN 472
            CIDGTKRLCHIRGKMHKKVWI +GDIVLVGLRDYQDDKADVILKYM DEARLLKAYGELPENTRLN
Sbjct:   51 CIDGTKRLCHIRGKMHKKVWIAAGDIVLVGLRDYQDDKADVILKYMSDEARLLKAYGELPENTRLN 116

[Close]

BLAST of DR067996 vs. TrEMBL
Match: Q93VF1|Q93VF1_ARATH (At2g04520/T1O3.7 OS=Arabidopsis thaliana PE=2 SV=1)

HSP 1 Score: 134.035 bits (336), Expect = 4.586e-30
Identity = 63/66 (95.45%), Postives = 64/66 (96.97%), Query Frame = -2

Query:  275 CIDGTKRLCHIRGKMHKKVWIPSGDIVLVGLRDYQDDKADVILKYMPDEARLLKAYGELPENTRLN 472
            CIDGTKRLCHIRGKMHKKVWI +GDIVLVGLRDYQDDKADVILKYM DEARLLKAYGELPENTRLN
Sbjct:   51 CIDGTKRLCHIRGKMHKKVWIAAGDIVLVGLRDYQDDKADVILKYMSDEARLLKAYGELPENTRLN 116

[Close]

BLAST of DR067996 vs. TrEMBL
Match: D7L820|D7L820_ARALY (Putative uncharacterized protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_899257 PE=4 SV=1)

HSP 1 Score: 134.035 bits (336), Expect = 4.586e-30
Identity = 63/66 (95.45%), Postives = 64/66 (96.97%), Query Frame = -2

Query:  275 CIDGTKRLCHIRGKMHKKVWIPSGDIVLVGLRDYQDDKADVILKYMPDEARLLKAYGELPENTRLN 472
            CIDGTKRLCHIRGKMHKKVWI +GDIVLVGLRDYQDDKADVILKYM DEARLLKAYGELPENTRLN
Sbjct:   51 CIDGTKRLCHIRGKMHKKVWIAAGDIVLVGLRDYQDDKADVILKYMSDEARLLKAYGELPENTRLN 116

[Close]

BLAST of DR067996 vs. TrEMBL
Match: B5M1Y2|B5M1Y2_RHEAU (Translation initiation factor OS=Rheum australe PE=2 SV=1)

HSP 1 Score: 132.88 bits (333), Expect = 1.022e-29
Identity = 61/67 (91.04%), Postives = 64/67 (95.52%), Query Frame = -2

Query:  275 TCIDGTKRLCHIRGKMHKKVWIPSGDIVLVGLRDYQDDKADVILKYMPDEARLLKAYGELPENTRLN 475
            TCID TKRLCHIRGKMHKKVWI +GDI+LVGLRDYQDDKADVILKYMPDEARLLKAYGELP+N RLN
Sbjct:   50 TCIDNTKRLCHIRGKMHKKVWIAAGDIILVGLRDYQDDKADVILKYMPDEARLLKAYGELPDNIRLN 116

[Close]

BLAST of DR067996 vs. Vitis vinifera peptide
Match: GSVIVT01008892001 (assembled CDS)

HSP 1 Score: 99.3673 bits (246), Expect = 7.013e-22
Identity = 46/54 (85.19%), Postives = 51/54 (94.44%), Query Frame = -2

Query:  275 GKMHKKVWIPSGDIVLVGLRDYQDDKADVILKYMPDEARLLKAYGELPENTRLN 436
            G+ + +VWI +GDI+LVGLRDYQDDKADVILKYMPDEARLLKAYGELPENTRLN
Sbjct:   19 GQEYAQVWIAAGDIILVGLRDYQDDKADVILKYMPDEARLLKAYGELPENTRLN 72

[Close]

BLAST of DR067996 vs. TAIR peptide
Match: AT2G04520.1 (| Symbols: | Nucleic acid-binding, OB-fold-like protein | chr2:1574802-1575239 REVERSE LENGTH=145)

HSP 1 Score: 134.035 bits (336), Expect = 3.689e-32
Identity = 63/66 (95.45%), Postives = 64/66 (96.97%), Query Frame = -2

Query:  275 CIDGTKRLCHIRGKMHKKVWIPSGDIVLVGLRDYQDDKADVILKYMPDEARLLKAYGELPENTRLN 472
            CIDGTKRLCHIRGKMHKKVWI +GDIVLVGLRDYQDDKADVILKYM DEARLLKAYGELPENTRLN
Sbjct:   51 CIDGTKRLCHIRGKMHKKVWIAAGDIVLVGLRDYQDDKADVILKYMSDEARLLKAYGELPENTRLN 116

[Close]

BLAST of DR067996 vs. TAIR peptide
Match: AT5G35680.3 (| Symbols: | Nucleic acid-binding, OB-fold-like protein | chr5:13858085-13858589 REVERSE LENGTH=150)

HSP 1 Score: 131.724 bits (330), Expect = 1.831e-31
Identity = 61/66 (92.42%), Postives = 63/66 (95.45%), Query Frame = -2

Query:  275 CIDGTKRLCHIRGKMHKKVWIPSGDIVLVGLRDYQDDKADVILKYMPDEARLLKAYGELPENTRLN 472
            CIDG KRLCHIRGKMHKKVWI +GDI+LVGLRDYQDDKADVILKYM DEARLLKAYGELPENTRLN
Sbjct:   51 CIDGVKRLCHIRGKMHKKVWIAAGDIILVGLRDYQDDKADVILKYMSDEARLLKAYGELPENTRLN 116

[Close]

BLAST of DR067996 vs. TAIR peptide
Match: AT5G35680.2 (| Symbols: | Nucleic acid-binding, OB-fold-like protein | chr5:13858152-13858589 REVERSE LENGTH=145)

HSP 1 Score: 131.724 bits (330), Expect = 1.831e-31
Identity = 61/66 (92.42%), Postives = 63/66 (95.45%), Query Frame = -2

Query:  275 CIDGTKRLCHIRGKMHKKVWIPSGDIVLVGLRDYQDDKADVILKYMPDEARLLKAYGELPENTRLN 472
            CIDG KRLCHIRGKMHKKVWI +GDI+LVGLRDYQDDKADVILKYM DEARLLKAYGELPENTRLN
Sbjct:   51 CIDGVKRLCHIRGKMHKKVWIAAGDIILVGLRDYQDDKADVILKYMSDEARLLKAYGELPENTRLN 116

[Close]

BLAST of DR067996 vs. TAIR peptide
Match: AT5G35680.1 (| Symbols: | Nucleic acid-binding, OB-fold-like protein | chr5:13858152-13858589 REVERSE LENGTH=145)

HSP 1 Score: 131.724 bits (330), Expect = 1.831e-31
Identity = 61/66 (92.42%), Postives = 63/66 (95.45%), Query Frame = -2

Query:  275 CIDGTKRLCHIRGKMHKKVWIPSGDIVLVGLRDYQDDKADVILKYMPDEARLLKAYGELPENTRLN 472
            CIDG KRLCHIRGKMHKKVWI +GDI+LVGLRDYQDDKADVILKYM DEARLLKAYGELPENTRLN
Sbjct:   51 CIDGVKRLCHIRGKMHKKVWIAAGDIILVGLRDYQDDKADVILKYMSDEARLLKAYGELPENTRLN 116

The following BLAST results are available for this feature:

BLAST of DR067996 vs. DB:swissprot:display
BLAST of DR067996 vs. Populus trichocarpa peptide v2.0
BLAST of DR067996 vs. TrEMBL
BLAST of DR067996 vs. Vitis vinifera peptide
BLAST of DR067996 vs. TAIR peptide

BLAST of DR067996 vs. DB:swissprot:display
Analysis Date: 2011-01-18 (BLAST: Vaccinium corymbosum unigene v1 vs Swissprot)
Total hits: 10


Match Name	E-value	Identity	Description
IF1A_ONOVI	9.434e-31	92.42	Eukaryotic translation initiation factor 1A OS=Ono...	[more]
IF1A_WHEAT	2.324e-29	89.39	Eukaryotic translation initiation factor 1A OS=Tri...	[more]
IF1AY_PANTR	3.839e-24	75.76	Eukaryotic translation initiation factor 1A, Y-chr...	[more]
IF1AY_HUMAN	3.839e-24	75.76	Eukaryotic translation initiation factor 1A, Y-chr...	[more]
IF1AX_PONAB	3.839e-24	75.76	Eukaryotic translation initiation factor 1A, X-chr...	[more]
IF1AX_MOUSE	3.839e-24	75.76	Eukaryotic translation initiation factor 1A, X-chr...	[more]
IF1AX_HUMAN	3.839e-24	75.76	Eukaryotic translation initiation factor 1A, X-chr...	[more]
IF1A_RAT	1.117e-23	72.73	Eukaryotic translation initiation factor 1A OS=Rat...	[more]
IF1A_MOUSE	1.117e-23	72.73	Eukaryotic translation initiation factor 1A OS=Mus...	[more]
IF1A_RABIT	2.329e-21	73.44	Eukaryotic translation initiation factor 1A OS=Ory...	[more]

BLAST of DR067996 vs. Populus trichocarpa peptide v2.0
Analysis Date: 2011-01-18 (BLAST: Vaccinium corymbosum unigene v1 vs Populus trichocarpa v2.0 peptide)
Total hits: 4


Match Name	E-value	Identity
POPTR_0002s21870.1	1.693e-33	95.52	[more]
POPTR_0014s15910.1	6.432e-33	95.45	[more]
POPTR_0002s03310.1	1.388e-27	81.82	[more]
POPTR_0014s08950.1	3.788e-17	75.47	[more]

BLAST of DR067996 vs. TrEMBL
Analysis Date: 2011-01-18 (BLAST: Vaccinium corymbosum unigene v1 vs TrEMBL)
Total hits: 10


Match Name	E-value	Identity	Description
A9PE28\|A9PE28_POPTR	1.862e-31	95.52	Predicted protein OS=Populus trichocarpa GN=POPTRD...	[more]
Q2XTB8\|Q2XTB8_SOLTU	5.418e-31	96.97	Putative translation initiation factor eIF-1A-like...	[more]
A9PCD3\|A9PCD3_POPTR	7.076e-31	95.45	Predicted protein OS=Populus trichocarpa GN=POPTRD...	[more]
A5BQH0\|A5BQH0_VITVI	7.076e-31	95.45	Putative uncharacterized protein OS=Vitis vinifera...	[more]
A9NLE4\|A9NLE4_PICSI	2.059e-30	95.45	Putative uncharacterized protein OS=Picea sitchens...	[more]
B9SSH7\|B9SSH7_RICCO	2.689e-30	93.94	Eif-1a, putative OS=Ricinus communis GN=RCOM_05108...	[more]
Q9SJB9\|Q9SJB9_ARATH	4.586e-30	95.45	Putative translation initiation factor eIF-1A OS=A...	[more]
Q93VF1\|Q93VF1_ARATH	4.586e-30	95.45	At2g04520/T1O3.7 OS=Arabidopsis thaliana PE=2 SV=1	[more]
D7L820\|D7L820_ARALY	4.586e-30	95.45	Putative uncharacterized protein OS=Arabidopsis ly...	[more]
B5M1Y2\|B5M1Y2_RHEAU	1.022e-29	91.04	Translation initiation factor OS=Rheum australe PE...	[more]

BLAST of DR067996 vs. Vitis vinifera peptide
Analysis Date: 2011-01-25 (BLAST: Vaccinium corymbosum unigene v1 vs Vitis vinifera peptide)
Total hits: 1


Match Name	E-value	Identity	Description
GSVIVT01008892001	7.013e-22	85.19	assembled CDS	[more]

BLAST of DR067996 vs. TAIR peptide
Analysis Date: 2011-02-10 (BLAST: Vaccinium corymbosum unigene v1 vs TAIR 10 peptide)
Total hits: 4


Match Name	E-value	Identity	Description
AT2G04520.1	3.689e-32	95.45	\| Symbols: \| Nucleic acid-binding, OB-fold-like p...	[more]
AT5G35680.3	1.831e-31	92.42	\| Symbols: \| Nucleic acid-binding, OB-fold-like p...	[more]
AT5G35680.2	1.831e-31	92.42	\| Symbols: \| Nucleic acid-binding, OB-fold-like p...	[more]
AT5G35680.1	1.831e-31	92.42	\| Symbols: \| Nucleic acid-binding, OB-fold-like p...	[more]

InterPro

Analysis Name: InterProScan analysis for Vaccinium corymbosum unigene v1
Date Performed: 2011-01-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	SEG	seg	seg	coord: 30..51 score: NAcoord: 87..98 score
None	No IPR available	SEG	seg	seg	coord: 35..55 score
None	No IPR available	SEG	seg	seg	coord: 68..96 score
IPR001253	Translation initiation factor 1A (eIF-1A)	PANTHER	PTHR21668	EIF-1A	coord: 1..96 score: 5.7
IPR001253	Translation initiation factor 1A (eIF-1A)	SMART	SM00652	no description	coord: 2..61 score: 7.8
IPR006196	RNA-binding domain, S1, IF1 type	PFAM	PF01176	eIF-1a	coord: 2..45 score: 1.1
IPR006196	RNA-binding domain, S1, IF1 type	PROFILE	PS50832	S1_IF1_TYPE	coord: 1..47 score: 22
IPR012340	Nucleic acid-binding, OB-fold	GENE3D	2.40.50.140	no description	coord: 2..95 score: 1.8
IPR016027	Nucleic acid-binding, OB-fold-like	SUPERFAMILY	50249	Nucleic acid-binding proteins	coord: 2..96 score: 1.4

Properties


Property Name	Value
Singlet in analysis	Vaccinium corymbosum unigene v1

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>DR067996 ID=DR067996; Name=DR067996; organism=Vaccinium corymbosum; type=EST; length=476bp
GGTGTAAAGCCCTACAGAGCATAGAGATGAGAATACAACTGGGTAATCTT
CCAATCAATTTATCACAAACACATCATGATACACCAAATTACAAATCATA
AAGATAGCAGTAATACATAACAATCCCCATAGAAATTCAACCAAAATCCA
CCAACTTATTCTTCAAAACACAACCAACCCGAATTTAAATCTTATCGATA
TCCTCATCCTCAAACTCAATATAATCATCACCAGCCCCTTCCTCTTCCTC
GTCGATCCCGCCCGGGATCCCCTCGTTCAGCCTCGTGTTCTCCGGCAACT
CTCCGTACGCCTTCAACAGCCTCGCCTCGTCGGGCATGTACTTGAGGATG
ACGTCAGCCTTGTCGTCCTGGTAATCTCTCAGCCCGACGAGGACGATGTC
GCCGGACGGGATCCAGACCTTCTTGTGCATCTTACCTCGAATGTGGCAGA
GCCGCTTGGTGCCGTCGATGCATGTG

Annotated Terms

The following terms have been associated with this EST:

Vocabulary: **Molecular Function**
Term	Definition
GO:0003743	translation initiation factor activity
GO:0003723	RNA binding

Vocabulary: **Biological Process**
Term	Definition
GO:0006413	translational initiation

Vocabulary: **INTERPRO**
Term	Definition
noIPR	unintegrated
IPR001253	TIF_eIF-1A
IPR006196	RNA-binding_domain_S1_IF1
IPR012340	NA-bd_OB-fold
IPR016027	Nucleic acid-binding, OB-fold-like