DW043072 | GDV

EST Overview


Name	DW043072
Unique Name	DW043072
Type	EST
Organism	Vaccinium corymbosum (northern highbush blueberry)
Sequence length	573

Libraries


Library Name	Type
LIBEST_018809 Reverse subtracted cDNA library of Vaccinium corymbosum	cdna_library

Unigenes

This EST is part of the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
	Vaccinium corymbosum unigene v1	EST

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
Vaccinium corymbosum unigene v1	2011-01-18
BLAST: Vaccinium corymbosum unigene v1 vs Ppersica v1.0 peptide	2011-01-18
BLAST: Vaccinium corymbosum unigene v1 vs Swissprot	2011-01-18
BLAST: Vaccinium corymbosum unigene v1 vs Populus trichocarpa v2.0 peptide	2011-01-18
BLAST: Vaccinium corymbosum unigene v1 vs TrEMBL	2011-01-18
BLAST: Vaccinium corymbosum unigene v1 vs Vitis vinifera peptide	2011-01-25
BLAST: Vaccinium corymbosum unigene v1 vs TAIR 10 peptide	2011-02-10

Homology

[Close]

BLAST of DW043072 vs. DB:swissprot:display
Match: CSN4_ARATH (COP9 signalosome complex subunit 4 OS=Arabidopsis thaliana GN=CSN4 PE=1 SV=2)

HSP 1 Score: 109.768 bits (273), Expect = 5.176e-26
Identity = 69/114 (60.53%), Postives = 78/114 (68.42%), Query Frame = 1

Query:  112 PI*QKVYLERI*RKPEIDALC*RT*STSESALCRIIITVLDRAMIEHNL*SASKLYTNISFDELGT*LGIAPHKAEKIASRMIFEDRMRGSHRSGRSCDSF*G*HLKELQQWDQ 453
            PI QKVYLERI R+PEIDA         +++L     TVLDRAMIEHNL SASKLYTNI FDELGT L I P KAEKIA+ MI +DRMRGS     +   F    ++ELQQWDQ
Sbjct:  261 PILQKVYLERILRRPEIDAFSEELRPHQKASLPDKS-TVLDRAMIEHNLLSASKLYTNIRFDELGTLLAIDPRKAEKIAANMIGQDRMRGSIDQEEAVIHFED-DVEELQQWDQ 372

HSP 2 Score: 28.4906 bits (62), Expect = 5.176e-26
Identity = 11/16 (68.75%), Postives = 14/16 (87.50%), Query Frame = 3

Query:  480 LNDVLDTWAKKGLSIP 527
            LND+LD  AKKG+S+P
Sbjct:  381 LNDILDGMAKKGMSVP 396

[Close]

BLAST of DW043072 vs. DB:swissprot:display
Match: CSN4_DANRE (COP9 signalosome complex subunit 4 OS=Danio rerio GN=cops4 PE=2 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 1.500e-17
Identity = 44/87 (50.57%), Postives = 56/87 (64.37%), Query Frame = 1

Query:  121 QKVYLERI*RKPEIDALC*RT*STSESALCRIIITVLDRAMIEHNL*SASKLYTNISFDELGT*LGIAPHKAEKIASRMIFEDRMRG 381
            +K+YL+RI R  ++           + A      ++LDRA+IEHNL SASKLY NI+F+ELG  L I P KAEKIAS+MI E RM G
Sbjct:  265 EKMYLDRIIRGNQLQEFAAML-MPHQKATTADGSSILDRAVIEHNLLSASKLYNNITFEELGALLEIPPAKAEKIASQMITEGRMNG 350

HSP 2 Score: 34.2686 bits (77), Expect = 1.500e-17
Identity = 15/23 (65.22%), Postives = 18/23 (78.26%), Query Frame = 3

Query:   42 GPQRSRVLAT*YKDERCSKLKIY 110
            G QRSR+LAT +KDERC +L  Y
Sbjct:  239 GQQRSRMLATLFKDERCQQLAAY 261

HSP 3 Score: 22.3274 bits (46), Expect = 1.500e-17
Identity = 11/29 (37.93%), Postives = 17/29 (58.62%), Query Frame = 2

Query:  386 IDQVEAVIHFEDDT*KSCNSGINQIVGLC 472
            IDQ++ ++HFE  T +   +   QI  LC
Sbjct:  352 IDQIDGIVHFE--TREPLPTWDKQIQSLC 378

[Close]

BLAST of DW043072 vs. DB:swissprot:display
Match: CSN4_DROME (COP9 signalosome complex subunit 4 OS=Drosophila melanogaster GN=CSN4 PE=1 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 1.942e-17
Identity = 46/90 (51.11%), Postives = 58/90 (64.44%), Query Frame = 1

Query:  121 QKVYLERI*RKPEI---DALC*RT*STSESALCRIIITVLDRAMIEHNL*SASKLYTNISFDELGT*LGIAPHKAEKIASRMIFEDRMRG 381
            +K+YLERI R+ E+   +AL        + A      ++LDRA+ EHNL SASKLY NI+F+ELG  L I   KAEKIAS+MI E RM G
Sbjct:  272 EKMYLERIIRRSELQEFEALL----QDHQKAATSDGSSILDRAVFEHNLLSASKLYNNITFEELGALLDIPAVKAEKIASQMITEGRMNG 357

HSP 2 Score: 33.4982 bits (75), Expect = 1.942e-17
Identity = 15/23 (65.22%), Postives = 17/23 (73.91%), Query Frame = 3

Query:   42 GPQRSRVLAT*YKDERCSKLKIY 110
            G QRSR+LAT +KDERC  L  Y
Sbjct:  246 GQQRSRMLATLFKDERCQHLPAY 268

HSP 3 Score: 23.0978 bits (48), Expect = 1.942e-17
Identity = 7/12 (58.33%), Postives = 11/12 (91.67%), Query Frame = 2

Query:  386 IDQVEAVIHFED 421
            IDQ+ A++HFE+
Sbjct:  359 IDQISAIVHFEN 370

[Close]

BLAST of DW043072 vs. DB:swissprot:display
Match: CSN4_RAT (COP9 signalosome complex subunit 4 OS=Rattus norvegicus GN=Cops4 PE=2 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 7.065e-17
Identity = 43/87 (49.43%), Postives = 55/87 (63.22%), Query Frame = 1

Query:  121 QKVYLERI*RKPEIDALC*RT*STSESALCRIIITVLDRAMIEHNL*SASKLYTNISFDELGT*LGIAPHKAEKIASRMIFEDRMRG 381
            +K+YL+RI R  ++           + A      ++LDRA+IEHNL SASKLY NI+F+ELG  L I   KAEKIAS+MI E RM G
Sbjct:  265 EKMYLDRIIRGNQLQEFAAML-MPHQKATTADGSSILDRAVIEHNLLSASKLYNNITFEELGALLEIPAAKAEKIASQMITEGRMNG 350

HSP 2 Score: 34.2686 bits (77), Expect = 7.065e-17
Identity = 15/23 (65.22%), Postives = 18/23 (78.26%), Query Frame = 3

Query:   42 GPQRSRVLAT*YKDERCSKLKIY 110
            G QRSR+LAT +KDERC +L  Y
Sbjct:  239 GQQRSRMLATLFKDERCQQLAAY 261

HSP 3 Score: 23.0978 bits (48), Expect = 7.065e-17
Identity = 11/29 (37.93%), Postives = 18/29 (62.07%), Query Frame = 2

Query:  386 IDQVEAVIHFEDDT*KSCNSGINQIVGLC 472
            IDQ++ ++HFE  T ++  +   QI  LC
Sbjct:  352 IDQIDGIVHFE--TREALPTWDKQIQSLC 378

[Close]

BLAST of DW043072 vs. DB:swissprot:display
Match: CSN4_PONAB (COP9 signalosome complex subunit 4 OS=Pongo abelii GN=COPS4 PE=2 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 7.065e-17
Identity = 43/87 (49.43%), Postives = 55/87 (63.22%), Query Frame = 1

Query:  121 QKVYLERI*RKPEIDALC*RT*STSESALCRIIITVLDRAMIEHNL*SASKLYTNISFDELGT*LGIAPHKAEKIASRMIFEDRMRG 381
            +K+YL+RI R  ++           + A      ++LDRA+IEHNL SASKLY NI+F+ELG  L I   KAEKIAS+MI E RM G
Sbjct:  265 EKMYLDRIIRGNQLQEFAAML-MPHQKATTADGSSILDRAVIEHNLLSASKLYNNITFEELGALLEIPAAKAEKIASQMITEGRMNG 350

HSP 2 Score: 34.2686 bits (77), Expect = 7.065e-17
Identity = 15/23 (65.22%), Postives = 18/23 (78.26%), Query Frame = 3

Query:   42 GPQRSRVLAT*YKDERCSKLKIY 110
            G QRSR+LAT +KDERC +L  Y
Sbjct:  239 GQQRSRMLATLFKDERCQQLAAY 261

HSP 3 Score: 23.0978 bits (48), Expect = 7.065e-17
Identity = 11/29 (37.93%), Postives = 18/29 (62.07%), Query Frame = 2

Query:  386 IDQVEAVIHFEDDT*KSCNSGINQIVGLC 472
            IDQ++ ++HFE  T ++  +   QI  LC
Sbjct:  352 IDQIDGIVHFE--TREALPTWDKQIQSLC 378

[Close]

BLAST of DW043072 vs. DB:swissprot:display
Match: CSN4_PIG (COP9 signalosome complex subunit 4 OS=Sus scrofa GN=COPS4 PE=2 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 7.065e-17
Identity = 43/87 (49.43%), Postives = 55/87 (63.22%), Query Frame = 1

Query:  121 QKVYLERI*RKPEIDALC*RT*STSESALCRIIITVLDRAMIEHNL*SASKLYTNISFDELGT*LGIAPHKAEKIASRMIFEDRMRG 381
            +K+YL+RI R  ++           + A      ++LDRA+IEHNL SASKLY NI+F+ELG  L I   KAEKIAS+MI E RM G
Sbjct:  265 EKMYLDRIIRGNQLQEFAAML-MPHQKATTADGSSILDRAVIEHNLLSASKLYNNITFEELGALLEIPAAKAEKIASQMITEGRMNG 350

HSP 2 Score: 34.2686 bits (77), Expect = 7.065e-17
Identity = 15/23 (65.22%), Postives = 18/23 (78.26%), Query Frame = 3

Query:   42 GPQRSRVLAT*YKDERCSKLKIY 110
            G QRSR+LAT +KDERC +L  Y
Sbjct:  239 GQQRSRMLATLFKDERCQQLAAY 261

HSP 3 Score: 23.0978 bits (48), Expect = 7.065e-17
Identity = 11/29 (37.93%), Postives = 18/29 (62.07%), Query Frame = 2

Query:  386 IDQVEAVIHFEDDT*KSCNSGINQIVGLC 472
            IDQ++ ++HFE  T ++  +   QI  LC
Sbjct:  352 IDQIDGIVHFE--TREALPTWDKQIQSLC 378

[Close]

BLAST of DW043072 vs. DB:swissprot:display
Match: CSN4_MOUSE (COP9 signalosome complex subunit 4 OS=Mus musculus GN=Cops4 PE=1 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 7.065e-17
Identity = 43/87 (49.43%), Postives = 55/87 (63.22%), Query Frame = 1

Query:  121 QKVYLERI*RKPEIDALC*RT*STSESALCRIIITVLDRAMIEHNL*SASKLYTNISFDELGT*LGIAPHKAEKIASRMIFEDRMRG 381
            +K+YL+RI R  ++           + A      ++LDRA+IEHNL SASKLY NI+F+ELG  L I   KAEKIAS+MI E RM G
Sbjct:  265 EKMYLDRIIRGNQLQEFAAML-MPHQKATTADGSSILDRAVIEHNLLSASKLYNNITFEELGALLEIPAAKAEKIASQMITEGRMNG 350

HSP 2 Score: 34.2686 bits (77), Expect = 7.065e-17
Identity = 15/23 (65.22%), Postives = 18/23 (78.26%), Query Frame = 3

Query:   42 GPQRSRVLAT*YKDERCSKLKIY 110
            G QRSR+LAT +KDERC +L  Y
Sbjct:  239 GQQRSRMLATLFKDERCQQLAAY 261

HSP 3 Score: 23.0978 bits (48), Expect = 7.065e-17
Identity = 11/29 (37.93%), Postives = 18/29 (62.07%), Query Frame = 2

Query:  386 IDQVEAVIHFEDDT*KSCNSGINQIVGLC 472
            IDQ++ ++HFE  T ++  +   QI  LC
Sbjct:  352 IDQIDGIVHFE--TREALPTWDKQIQSLC 378

[Close]

BLAST of DW043072 vs. DB:swissprot:display
Match: CSN4_MACFA (COP9 signalosome complex subunit 4 OS=Macaca fascicularis GN=COPS4 PE=2 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 7.065e-17
Identity = 43/87 (49.43%), Postives = 55/87 (63.22%), Query Frame = 1

Query:  121 QKVYLERI*RKPEIDALC*RT*STSESALCRIIITVLDRAMIEHNL*SASKLYTNISFDELGT*LGIAPHKAEKIASRMIFEDRMRG 381
            +K+YL+RI R  ++           + A      ++LDRA+IEHNL SASKLY NI+F+ELG  L I   KAEKIAS+MI E RM G
Sbjct:  265 EKMYLDRIIRGNQLQEFAAML-MPHQKATTADGSSILDRAVIEHNLLSASKLYNNITFEELGALLEIPAAKAEKIASQMITEGRMNG 350

HSP 2 Score: 34.2686 bits (77), Expect = 7.065e-17
Identity = 15/23 (65.22%), Postives = 18/23 (78.26%), Query Frame = 3

Query:   42 GPQRSRVLAT*YKDERCSKLKIY 110
            G QRSR+LAT +KDERC +L  Y
Sbjct:  239 GQQRSRMLATLFKDERCQQLAAY 261

HSP 3 Score: 23.0978 bits (48), Expect = 7.065e-17
Identity = 11/29 (37.93%), Postives = 18/29 (62.07%), Query Frame = 2

Query:  386 IDQVEAVIHFEDDT*KSCNSGINQIVGLC 472
            IDQ++ ++HFE  T ++  +   QI  LC
Sbjct:  352 IDQIDGIVHFE--TREALPTWDKQIQSLC 378

[Close]

BLAST of DW043072 vs. DB:swissprot:display
Match: CSN4_HUMAN (COP9 signalosome complex subunit 4 OS=Homo sapiens GN=COPS4 PE=1 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 7.065e-17
Identity = 43/87 (49.43%), Postives = 55/87 (63.22%), Query Frame = 1

Query:  121 QKVYLERI*RKPEIDALC*RT*STSESALCRIIITVLDRAMIEHNL*SASKLYTNISFDELGT*LGIAPHKAEKIASRMIFEDRMRG 381
            +K+YL+RI R  ++           + A      ++LDRA+IEHNL SASKLY NI+F+ELG  L I   KAEKIAS+MI E RM G
Sbjct:  265 EKMYLDRIIRGNQLQEFAAML-MPHQKATTADGSSILDRAVIEHNLLSASKLYNNITFEELGALLEIPAAKAEKIASQMITEGRMNG 350

HSP 2 Score: 34.2686 bits (77), Expect = 7.065e-17
Identity = 15/23 (65.22%), Postives = 18/23 (78.26%), Query Frame = 3

Query:   42 GPQRSRVLAT*YKDERCSKLKIY 110
            G QRSR+LAT +KDERC +L  Y
Sbjct:  239 GQQRSRMLATLFKDERCQQLAAY 261

HSP 3 Score: 23.0978 bits (48), Expect = 7.065e-17
Identity = 11/29 (37.93%), Postives = 18/29 (62.07%), Query Frame = 2

Query:  386 IDQVEAVIHFEDDT*KSCNSGINQIVGLC 472
            IDQ++ ++HFE  T ++  +   QI  LC
Sbjct:  352 IDQIDGIVHFE--TREALPTWDKQIQSLC 378

[Close]

BLAST of DW043072 vs. DB:swissprot:display
Match: CSN4_BOVIN (COP9 signalosome complex subunit 4 OS=Bos taurus GN=COPS4 PE=2 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 7.065e-17
Identity = 43/87 (49.43%), Postives = 55/87 (63.22%), Query Frame = 1

Query:  121 QKVYLERI*RKPEIDALC*RT*STSESALCRIIITVLDRAMIEHNL*SASKLYTNISFDELGT*LGIAPHKAEKIASRMIFEDRMRG 381
            +K+YL+RI R  ++           + A      ++LDRA+IEHNL SASKLY NI+F+ELG  L I   KAEKIAS+MI E RM G
Sbjct:  265 EKMYLDRIIRGNQLQEFAAML-MPHQKATTADGSSILDRAVIEHNLLSASKLYNNITFEELGALLEIPAAKAEKIASQMITEGRMNG 350

HSP 2 Score: 34.2686 bits (77), Expect = 7.065e-17
Identity = 15/23 (65.22%), Postives = 18/23 (78.26%), Query Frame = 3

Query:   42 GPQRSRVLAT*YKDERCSKLKIY 110
            G QRSR+LAT +KDERC +L  Y
Sbjct:  239 GQQRSRMLATLFKDERCQQLAAY 261

HSP 3 Score: 23.0978 bits (48), Expect = 7.065e-17
Identity = 11/29 (37.93%), Postives = 18/29 (62.07%), Query Frame = 2

Query:  386 IDQVEAVIHFEDDT*KSCNSGINQIVGLC 472
            IDQ++ ++HFE  T ++  +   QI  LC
Sbjct:  352 IDQIDGIVHFE--TREALPTWDKQIQSLC 378

[Close]

BLAST of DW043072 vs. Populus trichocarpa peptide v2.0
Match: POPTR_0002s26400.1 ()

HSP 1 Score: 126.716 bits (317), Expect = 6.853e-33
Identity = 76/114 (66.67%), Postives = 81/114 (71.05%), Query Frame = 1

Query:  112 PI*QKVYLERI*RKPEIDALC*RT*STSESALCRIIITVLDRAMIEHNL*SASKLYTNISFDELGT*LGIAPHKAEKIASRMIFEDRMRGSHRSGRSCDSF*G*HLKELQQWDQ 453
            PI QKVYLERI RKPEIDA         + AL     TVLDRAMIEHNL SASKLYTNISFDELGT LGI PHKAEKIASRMI+EDRMRG+     +   F     +ELQQWDQ
Sbjct:  261 PILQKVYLERILRKPEIDAFSEEL-KAHQKALLPDNFTVLDRAMIEHNLLSASKLYTNISFDELGTLLGIPPHKAEKIASRMIYEDRMRGTIDQVEAVIHFED-DTEELQQWDQ 372

HSP 2 Score: 31.5722 bits (70), Expect = 6.853e-33
Identity = 13/24 (54.17%), Postives = 19/24 (79.17%), Query Frame = 3

Query:  456 RLLASAKRLNDVLDTWAKKGLSIP 527
            +++   + LNDVLD+ AKKGLS+P
Sbjct:  373 QIVGLCQALNDVLDSMAKKGLSVP 396

HSP 3 Score: 53.5286 bits (127), Expect = 1.025e-7
Identity = 30/60 (50.00%), Postives = 39/60 (65.00%), Query Frame = 3

Query:   42 GPQRSRVLAT*YKDERCSKLKIYTNLAEGVFGKNIEETRD*CIMLKNLKHIRKRFMPDNY 221
            GPQRSRVLAT YKDERCSKLKIY  + + V+ + I    +     + LK  +K  +PDN+
Sbjct:  238 GPQRSRVLATLYKDERCSKLKIYP-ILQKVYLERILRKPEIDAFSEELKAHQKALLPDNF 296

[Close]

BLAST of DW043072 vs. Populus trichocarpa peptide v2.0
Match: POPTR_0014s17920.1 ()

HSP 1 Score: 125.176 bits (313), Expect = 1.513e-32
Identity = 76/114 (66.67%), Postives = 80/114 (70.18%), Query Frame = 1

Query:  112 PI*QKVYLERI*RKPEIDALC*RT*STSESALCRIIITVLDRAMIEHNL*SASKLYTNISFDELGT*LGIAPHKAEKIASRMIFEDRMRGSHRSGRSCDSF*G*HLKELQQWDQ 453
            PI QKVYLERI RKPEIDA         + AL     TVLDRAMIEHNL SASKLYTNISF+ELGT LGI PHKAEKIASRMI+EDRMRGS     +   F      ELQQWDQ
Sbjct:  261 PILQKVYLERILRKPEIDAFSEEL-KAHQKALLPDNFTVLDRAMIEHNLLSASKLYTNISFEELGTLLGIPPHKAEKIASRMIYEDRMRGSIDQVEAVIHFED-DTVELQQWDQ 372

HSP 2 Score: 31.9574 bits (71), Expect = 1.513e-32
Identity = 14/24 (58.33%), Postives = 19/24 (79.17%), Query Frame = 3

Query:  456 RLLASAKRLNDVLDTWAKKGLSIP 527
            +++   + LNDVLD+ AKKGLSIP
Sbjct:  373 QIVGLCQALNDVLDSMAKKGLSIP 396

HSP 3 Score: 53.5286 bits (127), Expect = 1.025e-7
Identity = 30/60 (50.00%), Postives = 39/60 (65.00%), Query Frame = 3

Query:   42 GPQRSRVLAT*YKDERCSKLKIYTNLAEGVFGKNIEETRD*CIMLKNLKHIRKRFMPDNY 221
            GPQRSRVLAT YKDERCSKLKIY  + + V+ + I    +     + LK  +K  +PDN+
Sbjct:  238 GPQRSRVLATLYKDERCSKLKIYP-ILQKVYLERILRKPEIDAFSEELKAHQKALLPDNF 296

[Close]

BLAST of DW043072 vs. P. persica 1.0 peptide
Match: ppa006792m ()

HSP 1 Score: 126.331 bits (316), Expect = 1.845e-32
Identity = 76/114 (66.67%), Postives = 81/114 (71.05%), Query Frame = 1

Query:  112 PI*QKVYLERI*RKPEIDALC*RT*STSESALCRIIITVLDRAMIEHNL*SASKLYTNISFDELGT*LGIAPHKAEKIASRMIFEDRMRGSHRSGRSCDSF*G*HLKELQQWDQ 453
            PI QKVYLERI RKPEIDA         + AL     TVLDRAMIEHNL SASKLYTNISFDELGT LGI PHKAEKIAS+MI+EDRMRGS     +   F     +ELQQWDQ
Sbjct:  259 PILQKVYLERILRKPEIDAFSEEL-KPHQKALLPDNFTVLDRAMIEHNLLSASKLYTNISFDELGTLLGIEPHKAEKIASKMIYEDRMRGSIDQVEAVIHFED-DTEELQQWDQ 370

HSP 2 Score: 30.0314 bits (66), Expect = 1.845e-32
Identity = 13/24 (54.17%), Postives = 18/24 (75.00%), Query Frame = 3

Query:  456 RLLASAKRLNDVLDTWAKKGLSIP 527
            +++   + LNDVLD+ AKKGL IP
Sbjct:  371 QIVGLCQALNDVLDSMAKKGLPIP 394

HSP 3 Score: 53.5286 bits (127), Expect = 7.371e-8
Identity = 30/60 (50.00%), Postives = 39/60 (65.00%), Query Frame = 3

Query:   42 GPQRSRVLAT*YKDERCSKLKIYTNLAEGVFGKNIEETRD*CIMLKNLKHIRKRFMPDNY 221
            GPQRSRVLAT YKDERCSKLKIY  + + V+ + I    +     + LK  +K  +PDN+
Sbjct:  236 GPQRSRVLATLYKDERCSKLKIYP-ILQKVYLERILRKPEIDAFSEELKPHQKALLPDNF 294

[Close]

BLAST of DW043072 vs. TrEMBL
Match: B9R7R6|B9R7R6_RICCO (Cop9 complex subunit, putative OS=Ricinus communis GN=RCOM_1593880 PE=4 SV=1)

HSP 1 Score: 128.257 bits (321), Expect = 2.117e-31
Identity = 77/114 (67.54%), Postives = 81/114 (71.05%), Query Frame = 1

Query:  112 PI*QKVYLERI*RKPEIDALC*RT*STSESALCRIIITVLDRAMIEHNL*SASKLYTNISFDELGT*LGIAPHKAEKIASRMIFEDRMRGSHRSGRSCDSF*G*HLKELQQWDQ 453
            PI QKVYLERI RKPEIDA         + AL     TVLDRAMIEHNL SASKLYTNISFDELGT LGI PHKAEKIASRMI+EDRMRGS     +   F     +ELQQWDQ
Sbjct:  261 PILQKVYLERILRKPEIDAFAEEL-KAHQKALLPDNFTVLDRAMIEHNLLSASKLYTNISFDELGTLLGIPPHKAEKIASRMIYEDRMRGSIDQVEAVIHFED-DTEELQQWDQ 372

HSP 2 Score: 31.9574 bits (71), Expect = 2.117e-31
Identity = 14/24 (58.33%), Postives = 19/24 (79.17%), Query Frame = 3

Query:  456 RLLASAKRLNDVLDTWAKKGLSIP 527
            +++   + LNDVLD+ AKKGLSIP
Sbjct:  373 QIVGLCQALNDVLDSMAKKGLSIP 396

[Close]

BLAST of DW043072 vs. TrEMBL
Match: A5BRX7|A5BRX7_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_036371 PE=4 SV=1)

HSP 1 Score: 127.102 bits (318), Expect = 4.675e-31
Identity = 77/114 (67.54%), Postives = 81/114 (71.05%), Query Frame = 1

Query:  112 PI*QKVYLERI*RKPEIDALC*RT*STSESALCRIIITVLDRAMIEHNL*SASKLYTNISFDELGT*LGIAPHKAEKIASRMIFEDRMRGSHRSGRSCDSF*G*HLKELQQWDQ 453
            PI QKVYLERI RKPEIDA         + AL     TVLDRAMIEHNL SASKLYTNISFDELGT LGIAP KAEKIASRMI+EDRMRGS     +   F     +ELQQWDQ
Sbjct:  261 PILQKVYLERILRKPEIDAFAEEL-KAHQKALLPDNFTVLDRAMIEHNLLSASKLYTNISFDELGTLLGIAPQKAEKIASRMIYEDRMRGSIDQVEAVIHFED-DTEELQQWDQ 372

HSP 2 Score: 31.9574 bits (71), Expect = 4.675e-31
Identity = 14/24 (58.33%), Postives = 19/24 (79.17%), Query Frame = 3

Query:  456 RLLASAKRLNDVLDTWAKKGLSIP 527
            +++   + LNDVLD+ AKKGLSIP
Sbjct:  373 QIVGLCQALNDVLDSMAKKGLSIP 396

[Close]

BLAST of DW043072 vs. TrEMBL
Match: A9PB47|A9PB47_POPTR (Putative uncharacterized protein OS=Populus trichocarpa PE=2 SV=1)

HSP 1 Score: 126.716 bits (317), Expect = 7.928e-31
Identity = 76/114 (66.67%), Postives = 81/114 (71.05%), Query Frame = 1

Query:  112 PI*QKVYLERI*RKPEIDALC*RT*STSESALCRIIITVLDRAMIEHNL*SASKLYTNISFDELGT*LGIAPHKAEKIASRMIFEDRMRGSHRSGRSCDSF*G*HLKELQQWDQ 453
            PI QKVYLERI RKPEIDA         + AL     TVLDRAMIEHNL SASKLYTNISFDELGT LGI PHKAEKIASRMI+EDRMRG+     +   F     +ELQQWDQ
Sbjct:  261 PILQKVYLERILRKPEIDAFSEEL-KAHQKALLPDNFTVLDRAMIEHNLLSASKLYTNISFDELGTLLGIPPHKAEKIASRMIYEDRMRGTIDQVEAVIHFED-DTEELQQWDQ 372

HSP 2 Score: 31.5722 bits (70), Expect = 7.928e-31
Identity = 13/24 (54.17%), Postives = 19/24 (79.17%), Query Frame = 3

Query:  456 RLLASAKRLNDVLDTWAKKGLSIP 527
            +++   + LNDVLD+ AKKGLS+P
Sbjct:  373 QIVGLCQALNDVLDSMAKKGLSVP 396

[Close]

BLAST of DW043072 vs. TrEMBL
Match: B9IB60|B9IB60_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_665031 PE=4 SV=1)

HSP 1 Score: 125.176 bits (313), Expect = 1.751e-30
Identity = 76/114 (66.67%), Postives = 80/114 (70.18%), Query Frame = 1

Query:  112 PI*QKVYLERI*RKPEIDALC*RT*STSESALCRIIITVLDRAMIEHNL*SASKLYTNISFDELGT*LGIAPHKAEKIASRMIFEDRMRGSHRSGRSCDSF*G*HLKELQQWDQ 453
            PI QKVYLERI RKPEIDA         + AL     TVLDRAMIEHNL SASKLYTNISF+ELGT LGI PHKAEKIASRMI+EDRMRGS     +   F      ELQQWDQ
Sbjct:  261 PILQKVYLERILRKPEIDAFSEEL-KAHQKALLPDNFTVLDRAMIEHNLLSASKLYTNISFEELGTLLGIPPHKAEKIASRMIYEDRMRGSIDQVEAVIHFED-DTVELQQWDQ 372

HSP 2 Score: 31.9574 bits (71), Expect = 1.751e-30
Identity = 14/24 (58.33%), Postives = 19/24 (79.17%), Query Frame = 3

Query:  456 RLLASAKRLNDVLDTWAKKGLSIP 527
            +++   + LNDVLD+ AKKGLSIP
Sbjct:  373 QIVGLCQALNDVLDSMAKKGLSIP 396

[Close]

BLAST of DW043072 vs. TrEMBL
Match: B8LR01|B8LR01_PICSI (Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1)

HSP 1 Score: 123.635 bits (309), Expect = 1.556e-28
Identity = 76/114 (66.67%), Postives = 81/114 (71.05%), Query Frame = 1

Query:  112 PI*QKVYLERI*RKPEIDALC*RT*STSESALCRIIITVLDRAMIEHNL*SASKLYTNISFDELGT*LGIAPHKAEKIASRMIFEDRMRGSHRSGRSCDSF*G*HLKELQQWDQ 453
            PI QKVYLERI RKPEIDA         + AL     TVLDRAMIEHNL SASKLYTNISF+ELGT LGIAP KAEKIASRMI EDRMRGS     +   F    ++ELQQWDQ
Sbjct:  265 PILQKVYLERILRKPEIDAFAEEL-KPHQKALLPDNSTVLDRAMIEHNLLSASKLYTNISFEELGTLLGIAPEKAEKIASRMICEDRMRGSIDQVEAVIHFED-DIEELQQWDQ 376

HSP 2 Score: 26.9498 bits (58), Expect = 1.556e-28
Identity = 11/23 (47.83%), Postives = 18/23 (78.26%), Query Frame = 3

Query:  456 RLLASAKRLNDVLDTWAKKGLSI 524
            +++   + LNDVLD+ A+KGL+I
Sbjct:  377 QIVGLCQALNDVLDSMARKGLTI 399

[Close]

BLAST of DW043072 vs. TrEMBL
Match: C5WUN5|C5WUN5_SORBI (Putative uncharacterized protein Sb01g043970 OS=Sorghum bicolor GN=Sb01g043970 PE=4 SV=1)

HSP 1 Score: 123.25 bits (308), Expect = 4.472e-28
Identity = 76/114 (66.67%), Postives = 80/114 (70.18%), Query Frame = 1

Query:  112 PI*QKVYLERI*RKPEIDALC*RT*STSESALCRIIITVLDRAMIEHNL*SASKLYTNISFDELGT*LGIAPHKAEKIASRMIFEDRMRGSHRSGRSCDSF*G*HLKELQQWDQ 453
            PI QKVYLERI RKPEIDA         + AL     TVLDRAMIEHNL SASKLYTNISFDELGT LGI P KAEKIASRMI+EDRMRGS     +   F     +ELQQWDQ
Sbjct:  263 PILQKVYLERILRKPEIDAFAEEL-RPHQKALLPDRSTVLDRAMIEHNLLSASKLYTNISFDELGTLLGIDPRKAEKIASRMIYEDRMRGSIDQVEAVIHF-DDDTEELQQWDQ 374

HSP 2 Score: 25.7942 bits (55), Expect = 4.472e-28
Identity = 9/16 (56.25%), Postives = 14/16 (87.50%), Query Frame = 3

Query:  480 LNDVLDTWAKKGLSIP 527
            LND+LD+ + KG++IP
Sbjct:  383 LNDILDSMSSKGIAIP 398

[Close]

BLAST of DW043072 vs. TrEMBL
Match: B4FCA4|B4FCA4_MAIZE (COP9 signalosome complex subunit 4 OS=Zea mays PE=2 SV=1)

HSP 1 Score: 123.25 bits (308), Expect = 4.472e-28
Identity = 76/114 (66.67%), Postives = 80/114 (70.18%), Query Frame = 1

Query:  112 PI*QKVYLERI*RKPEIDALC*RT*STSESALCRIIITVLDRAMIEHNL*SASKLYTNISFDELGT*LGIAPHKAEKIASRMIFEDRMRGSHRSGRSCDSF*G*HLKELQQWDQ 453
            PI QKVYLERI RKPEIDA         + AL     TVLDRAMIEHNL SASKLYTNISFDELGT LGI P KAEKIASRMI+EDRMRGS     +   F     +ELQQWDQ
Sbjct:  263 PILQKVYLERILRKPEIDAFAEEL-RPHQKALLPDKSTVLDRAMIEHNLLSASKLYTNISFDELGTLLGIDPRKAEKIASRMIYEDRMRGSIDQVEAVIHF-DDDTEELQQWDQ 374

HSP 2 Score: 25.7942 bits (55), Expect = 4.472e-28
Identity = 9/16 (56.25%), Postives = 14/16 (87.50%), Query Frame = 3

Query:  480 LNDVLDTWAKKGLSIP 527
            LND+LD+ + KG++IP
Sbjct:  383 LNDILDSMSSKGITIP 398

[Close]

BLAST of DW043072 vs. TrEMBL
Match: Q10QG2|Q10QG2_ORYSJ (COP9 signalosome complex subunit 4, putative, expressed OS=Oryza sativa subsp. japonica GN=Os03g0197400 PE=2 SV=1)

HSP 1 Score: 118.242 bits (295), Expect = 1.380e-26
Identity = 73/114 (64.04%), Postives = 79/114 (69.30%), Query Frame = 1

Query:  112 PI*QKVYLERI*RKPEIDALC*RT*STSESALCRIIITVLDRAMIEHNL*SASKLYTNISFDELGT*LGIAPHKAEKIASRMIFEDRMRGSHRSGRSCDSF*G*HLKELQQWDQ 453
            PI QKV+LERI RKPEI+A         + AL     TVLDRAMIEHNL SASKLYTNISFDELG  LGI P KAEKIASRMI+EDRMRGS     +   F     +ELQQWDQ
Sbjct:  263 PILQKVFLERILRKPEIEAFAEEL-RPHQKALLPDKSTVLDRAMIEHNLLSASKLYTNISFDELGALLGIDPRKAEKIASRMIYEDRMRGSIDQVEAVIHFED-DTEELQQWDQ 374

HSP 2 Score: 25.7942 bits (55), Expect = 1.380e-26
Identity = 9/16 (56.25%), Postives = 14/16 (87.50%), Query Frame = 3

Query:  480 LNDVLDTWAKKGLSIP 527
            LND+LD+ + KG++IP
Sbjct:  383 LNDILDSMSSKGMAIP 398

[Close]

BLAST of DW043072 vs. TrEMBL
Match: B8AQ35|B8AQ35_ORYSI (Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_10387 PE=4 SV=1)

HSP 1 Score: 118.242 bits (295), Expect = 1.380e-26
Identity = 73/114 (64.04%), Postives = 79/114 (69.30%), Query Frame = 1

Query:  112 PI*QKVYLERI*RKPEIDALC*RT*STSESALCRIIITVLDRAMIEHNL*SASKLYTNISFDELGT*LGIAPHKAEKIASRMIFEDRMRGSHRSGRSCDSF*G*HLKELQQWDQ 453
            PI QKV+LERI RKPEI+A         + AL     TVLDRAMIEHNL SASKLYTNISFDELG  LGI P KAEKIASRMI+EDRMRGS     +   F     +ELQQWDQ
Sbjct:  263 PILQKVFLERILRKPEIEAFAEEL-RPHQKALLPDKSTVLDRAMIEHNLLSASKLYTNISFDELGALLGIDPRKAEKIASRMIYEDRMRGSIDQVEAVIHFED-DTEELQQWDQ 374

HSP 2 Score: 25.7942 bits (55), Expect = 1.380e-26
Identity = 9/16 (56.25%), Postives = 14/16 (87.50%), Query Frame = 3

Query:  480 LNDVLDTWAKKGLSIP 527
            LND+LD+ + KG++IP
Sbjct:  383 LNDILDSMSSKGMAIP 398

[Close]

BLAST of DW043072 vs. TrEMBL
Match: B7FJZ9|B7FJZ9_MEDTR (Putative uncharacterized protein (Fragment) OS=Medicago truncatula PE=2 SV=1)

HSP 1 Score: 121.324 bits (303), Expect = 4.650e-26
Identity = 74/114 (64.91%), Postives = 80/114 (70.18%), Query Frame = 1

Query:  112 PI*QKVYLERI*RKPEIDALC*RT*STSESALCRIIITVLDRAMIEHNL*SASKLYTNISFDELGT*LGIAPHKAEKIASRMIFEDRMRGSHRSGRSCDSF*G*HLKELQQWDQ 453
            PI QKVYLERI RKPEIDA         + AL     TVLDRAMIEHNL SASKLYTNISFDELGT LGI P KAEKIASRMI+EDRM+GS     +   F     +ELQ+WDQ
Sbjct:  261 PILQKVYLERILRKPEIDAFAEEL-KPHQKALLPDNFTVLDRAMIEHNLLSASKLYTNISFDELGTLLGIPPPKAEKIASRMIYEDRMKGSIDQVEAIIHF-DDDTEELQRWDQ 372

[Close]

BLAST of DW043072 vs. Vitis vinifera peptide
Match: GSVIVT01009684001 (assembled CDS)

HSP 1 Score: 127.102 bits (318), Expect = 2.489e-33
Identity = 77/114 (67.54%), Postives = 81/114 (71.05%), Query Frame = 1

Query:  112 PI*QKVYLERI*RKPEIDALC*RT*STSESALCRIIITVLDRAMIEHNL*SASKLYTNISFDELGT*LGIAPHKAEKIASRMIFEDRMRGSHRSGRSCDSF*G*HLKELQQWDQ 453
            PI QKVYLERI RKPEIDA         + AL     TVLDRAMIEHNL SASKLYTNISFDELGT LGIAP KAEKIASRMI+EDRMRGS     +   F     +ELQQWDQ
Sbjct:  261 PILQKVYLERILRKPEIDAFAEEL-KAHQKALLPDNFTVLDRAMIEHNLLSASKLYTNISFDELGTLLGIAPQKAEKIASRMIYEDRMRGSIDQVEAVIHFED-DTEELQQWDQ 372

HSP 2 Score: 31.9574 bits (71), Expect = 2.489e-33
Identity = 14/24 (58.33%), Postives = 19/24 (79.17%), Query Frame = 3

Query:  456 RLLASAKRLNDVLDTWAKKGLSIP 527
            +++   + LNDVLD+ AKKGLSIP
Sbjct:  373 QIVGLCQALNDVLDSMAKKGLSIP 396

HSP 3 Score: 53.9138 bits (128), Expect = 4.836e-8
Identity = 30/60 (50.00%), Postives = 39/60 (65.00%), Query Frame = 3

Query:   42 GPQRSRVLAT*YKDERCSKLKIYTNLAEGVFGKNIEETRD*CIMLKNLKHIRKRFMPDNY 221
            GPQRSRVLAT YKDERCSKLKIY  + + V+ + I    +     + LK  +K  +PDN+
Sbjct:  238 GPQRSRVLATLYKDERCSKLKIYP-ILQKVYLERILRKPEIDAFAEELKAHQKALLPDNF 296

[Close]

BLAST of DW043072 vs. TAIR peptide
Match: AT5G42970.1 (| Symbols: COP8, FUS4, EMB134, COP14, CSN4, FUS8, ATS4 | Proteasome component (PCI) domain protein | chr5:17237470-17240649 REVERSE LENGTH=397)

HSP 1 Score: 109.768 bits (273), Expect = 5.482e-27
Identity = 69/114 (60.53%), Postives = 78/114 (68.42%), Query Frame = 1

Query:  112 PI*QKVYLERI*RKPEIDALC*RT*STSESALCRIIITVLDRAMIEHNL*SASKLYTNISFDELGT*LGIAPHKAEKIASRMIFEDRMRGSHRSGRSCDSF*G*HLKELQQWDQ 453
            PI QKVYLERI R+PEIDA         +++L     TVLDRAMIEHNL SASKLYTNI FDELGT L I P KAEKIA+ MI +DRMRGS     +   F    ++ELQQWDQ
Sbjct:  261 PILQKVYLERILRRPEIDAFSEELRPHQKASLPDKS-TVLDRAMIEHNLLSASKLYTNIRFDELGTLLAIDPRKAEKIAANMIGQDRMRGSIDQEEAVIHFED-DVEELQQWDQ 372

HSP 2 Score: 28.4906 bits (62), Expect = 5.482e-27
Identity = 11/16 (68.75%), Postives = 14/16 (87.50%), Query Frame = 3

Query:  480 LNDVLDTWAKKGLSIP 527
            LND+LD  AKKG+S+P
Sbjct:  381 LNDILDGMAKKGMSVP 396

The following BLAST results are available for this feature:

BLAST of DW043072 vs. DB:swissprot:display
BLAST of DW043072 vs. Populus trichocarpa peptide v2.0
BLAST of DW043072 vs. P. persica 1.0 peptide
BLAST of DW043072 vs. TrEMBL
BLAST of DW043072 vs. Vitis vinifera peptide
BLAST of DW043072 vs. TAIR peptide

BLAST of DW043072 vs. DB:swissprot:display
Analysis Date: 2011-01-18 (BLAST: Vaccinium corymbosum unigene v1 vs Swissprot)
Total hits: 10


Match Name	E-value	Identity	Description
CSN4_ARATH	5.176e-26	60.53	COP9 signalosome complex subunit 4 OS=Arabidopsis ...	[more]
CSN4_DANRE	1.500e-17	50.57	COP9 signalosome complex subunit 4 OS=Danio rerio ...	[more]
CSN4_DROME	1.942e-17	51.11	COP9 signalosome complex subunit 4 OS=Drosophila m...	[more]
CSN4_RAT	7.065e-17	49.43	COP9 signalosome complex subunit 4 OS=Rattus norve...	[more]
CSN4_PONAB	7.065e-17	49.43	COP9 signalosome complex subunit 4 OS=Pongo abelii...	[more]
CSN4_PIG	7.065e-17	49.43	COP9 signalosome complex subunit 4 OS=Sus scrofa G...	[more]
CSN4_MOUSE	7.065e-17	49.43	COP9 signalosome complex subunit 4 OS=Mus musculus...	[more]
CSN4_MACFA	7.065e-17	49.43	COP9 signalosome complex subunit 4 OS=Macaca fasci...	[more]
CSN4_HUMAN	7.065e-17	49.43	COP9 signalosome complex subunit 4 OS=Homo sapiens...	[more]
CSN4_BOVIN	7.065e-17	49.43	COP9 signalosome complex subunit 4 OS=Bos taurus G...	[more]

BLAST of DW043072 vs. Populus trichocarpa peptide v2.0
Analysis Date: 2011-01-18 (BLAST: Vaccinium corymbosum unigene v1 vs Populus trichocarpa v2.0 peptide)
Total hits: 2


Match Name	E-value	Identity	Description
POPTR_0002s26400.1	6.853e-33	66.67		[more]
POPTR_0014s17920.1	1.513e-32	66.67		[more]

BLAST of DW043072 vs. P. persica 1.0 peptide
Analysis Date: 2011-01-18 (BLAST: Vaccinium corymbosum unigene v1 vs Ppersica v1.0 peptide)
Total hits: 1


Match Name	E-value	Identity	Description
ppa006792m	1.845e-32	66.67		[more]

BLAST of DW043072 vs. TrEMBL
Analysis Date: 2011-01-18 (BLAST: Vaccinium corymbosum unigene v1 vs TrEMBL)
Total hits: 10


Match Name	E-value	Identity	Description
B9R7R6\|B9R7R6_RICCO	2.117e-31	67.54	Cop9 complex subunit, putative OS=Ricinus communis...	[more]
A5BRX7\|A5BRX7_VITVI	4.675e-31	67.54	Putative uncharacterized protein OS=Vitis vinifera...	[more]
A9PB47\|A9PB47_POPTR	7.928e-31	66.67	Putative uncharacterized protein OS=Populus tricho...	[more]
B9IB60\|B9IB60_POPTR	1.751e-30	66.67	Predicted protein OS=Populus trichocarpa GN=POPTRD...	[more]
B8LR01\|B8LR01_PICSI	1.556e-28	66.67	Putative uncharacterized protein OS=Picea sitchens...	[more]
C5WUN5\|C5WUN5_SORBI	4.472e-28	66.67	Putative uncharacterized protein Sb01g043970 OS=So...	[more]
B4FCA4\|B4FCA4_MAIZE	4.472e-28	66.67	COP9 signalosome complex subunit 4 OS=Zea mays PE=...	[more]
Q10QG2\|Q10QG2_ORYSJ	1.380e-26	64.04	COP9 signalosome complex subunit 4, putative, expr...	[more]
B8AQ35\|B8AQ35_ORYSI	1.380e-26	64.04	Putative uncharacterized protein OS=Oryza sativa s...	[more]
B7FJZ9\|B7FJZ9_MEDTR	4.650e-26	64.91	Putative uncharacterized protein (Fragment) OS=Med...	[more]

BLAST of DW043072 vs. Vitis vinifera peptide
Analysis Date: 2011-01-25 (BLAST: Vaccinium corymbosum unigene v1 vs Vitis vinifera peptide)
Total hits: 1


Match Name	E-value	Identity	Description
GSVIVT01009684001	2.489e-33	67.54	assembled CDS	[more]

BLAST of DW043072 vs. TAIR peptide
Analysis Date: 2011-02-10 (BLAST: Vaccinium corymbosum unigene v1 vs TAIR 10 peptide)
Total hits: 1


Match Name	E-value	Identity	Description
AT5G42970.1	5.482e-27	60.53	\| Symbols: COP8, FUS4, EMB134, COP14, CSN4, FUS8, ...	[more]

Properties


Property Name	Value
Singlet in analysis	Vaccinium corymbosum unigene v1

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>DW043072 ID=DW043072; Name=DW043072; organism=Vaccinium corymbosum; type=EST; length=573bp
ATCGAGCGGCCGCCCGGGCAGGTACAATTTTGGCTGCTGCGGGTCCTCAA
CGTTCTCGTGTCCTTGCGACATAGTACAAAGATGAACGGTGCTCCAAGTT
GAAGATTTACACCAATCTAGCAGAAGGTGTATTTGGAAAGAATATAGAGG
AAACCAGAGATTGATGCATTATGCTGAAGAACTTAAAGCACATCAGAAAG
CGCTTTATGCCGGATAATTATTACTGTGTTGGATCGTGCTATGATTGAGC
ATAATCTCTAGAGTGCAAGTAAACTTTACACAAACATAAGCTTTGATGAG
TTAGGCACATAACTCGGCATTGCCCCTCACAAGGCTGAGAAAATAGCATC
GAGAATGATCTTTGAAGATAGAATGAGGGGATCCCATAGATCAGGTCGAA
GCTGTGATTCATTTTGAGGATGACACCTGAAAGAGTTGCAACAGTGGGAT
CAACCAGATTGTTGGCCTCTGCCAAGCGCCTGAACGATGTACTGGATACC
TGGGCAAAGAAGGGATTGTCAATTCCATTTNGATGATTCGCTCCGTAAAT
GTTCAATTGACCGTTTTATTCCT