DW043289
EST Overview
Libraries
Unigenes
This EST is part of the following unigenes:
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DW043289 vs. Populus trichocarpa peptide v2.0
Match: POPTR_0008s15770.1 () HSP 1 Score: 50.447 bits (119), Expect = 8.149e-7 Identity = 36/94 (38.30%), Postives = 54/94 (57.45%), Query Frame = 3 Query: 147 MAASSVMQSILVSPATG--VAKPARVVGLKPMTPCCYMPRQQRSSSRLVRCMAKDGQNKEVETPATTSPKRLRSAPISYDVFAFSRAKHPERIN 422 MA S+VMQ++L +P V +RV L T Y+PR + S+S+ V+C D Q K++ P++T ++ +P D+FAFS PERIN Sbjct: 1 MATSTVMQTVLATPVPSGLVKNRSRVSNLFSAT---YVPRLRGSASKRVQCSKLDDQIKKLAEPSSTPKPKV--SPKFLDLFAFS-GPAPERIN 88
BLAST of DW043289 vs. TrEMBL
Match: B2BJD0|B2BJD0_RHOCT (Early light-induced protein 1 OS=Rhododendron catawbiense PE=2 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 4.301e-15 Identity = 52/93 (55.91%), Postives = 63/93 (67.74%), Query Frame = 3 Query: 147 MAASSVMQSILVSPATGVAKPARVVGLKPMTP-CCYMPRQQRSSSRLVRCMAKDGQNKEVETPATTSPKRLRSAPISYDVFAFSRAKHPERIN 422 MA SSVMQSILVSP TGVAK A GL P CY+PRQ R+S LVRCMAKDG+ +EVE+P + ++R+ +D+ AFS PERIN Sbjct: 1 MATSSVMQSILVSPVTGVAKGA---GLSRTIPRSCYLPRQGRNSGMLVRCMAKDGRKEEVESPIEANVAKVRTD--FFDLLAFS-GPGPERIN 87
BLAST of DW043289 vs. TrEMBL
Match: B2BJD1|B2BJD1_RHOCT (Early light-induced protein 2 OS=Rhododendron catawbiense PE=2 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 9.581e-15 Identity = 51/93 (54.84%), Postives = 63/93 (67.74%), Query Frame = 3 Query: 147 MAASSVMQSILVSPATGVAKPARVVGLKPMTP-CCYMPRQQRSSSRLVRCMAKDGQNKEVETPATTSPKRLRSAPISYDVFAFSRAKHPERIN 422 MA SSVMQSILVSP TGVAK A GL P CY+PRQ R+S LVRCMAKDG+ +EVE+P + ++++ +D+ AFS PERIN Sbjct: 1 MATSSVMQSILVSPVTGVAKGA---GLNRTIPRSCYLPRQGRNSGMLVRCMAKDGRKEEVESPIEANVAKVKTD--FFDLLAFS-GPGPERIN 87
BLAST of DW043289 vs. TrEMBL
Match: B2BJD4|B2BJD4_RHOCT (Early light-induced protein 5 OS=Rhododendron catawbiense PE=2 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 2.360e-13 Identity = 48/92 (52.17%), Postives = 59/92 (64.13%), Query Frame = 3 Query: 147 MAASSVMQSILVSPATGVAKPARVVGLKPMTPCCYMPRQQRSSSRLVRCMAKDGQNKEVETPATTSPKRLRSAPISYDVFAFSRAKHPERIN 422 MA SSVMQSI+VSP TGVAK + P + CCY+PRQ R+S LVRCMAK GQ +E +P PK A + +D+ AF + PERIN Sbjct: 1 MATSSVMQSIMVSPVTGVAKGTGLSRTIPRS-CCYLPRQGRNSGMLVRCMAKGGQKEEAGSP----PK----AKVLFDLLAF-KGPAPERIN 82
BLAST of DW043289 vs. TrEMBL
Match: B2BJD2|B2BJD2_RHOCT (Early light-induced protein 3 OS=Rhododendron catawbiense PE=2 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 2.360e-13 Identity = 51/93 (54.84%), Postives = 59/93 (63.44%), Query Frame = 3 Query: 147 MAASSVMQSILVSPATGVAKPARVVGLKPMTP-CCYMPRQQRSSSRLVRCMAKDGQNKEVETPATTSPKRLRSAPISYDVFAFSRAKHPERIN 422 MA SSVMQSILVSP TGVAK A GL P Y+PRQ R S LVRCMAKDG+ +EVE+P + + R +D+ AFS PERIN Sbjct: 1 MATSSVMQSILVSPVTGVAKGA---GLSRTIPRSSYLPRQGRDSGMLVRCMAKDGKKEEVESPVKATVAKARID--FFDLLAFS-GPGPERIN 87
BLAST of DW043289 vs. TrEMBL
Match: B2BJD5|B2BJD5_RHOCT (Early light-induced protein 6 OS=Rhododendron catawbiense PE=2 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 3.768e-11 Identity = 50/95 (52.63%), Postives = 59/95 (62.11%), Query Frame = 3 Query: 147 MAASSVMQSILVSPATGVAKPARVVGLKPMT---PCCYMPRQQRSSSRLVRCMAKDGQNKEVETPATTSPKRLRSAPISYDVFAFSRAKHPERIN 422 MA SSVMQSI+VSPATGVA + GL T CY+PRQ R+S LVRCMAK GQ +EV TSPK + +++ AFS PERIN Sbjct: 1 MATSSVMQSIMVSPATGVA--TKGTGLSRSTIPRSSCYLPRQGRNSGALVRCMAKGGQKEEV----GTSPK-AKVRTDFFNLLAFS-GPGPERIN 87
BLAST of DW043289 vs. TrEMBL
Match: B2CZY6|B2CZY6_CAMSI (Putative cold-inducible protein OS=Camellia sinensis GN=ELIP1 PE=2 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 1.096e-10 Identity = 48/102 (47.06%), Postives = 56/102 (54.90%), Query Frame = 3 Query: 153 ASSVMQSILVSPATGVAKPARVVGLKPMTPCCYMPRQQRSSSRLVRCMAKDGQNKEVETPATTSPKRLRSAPISY------------DVFAFSRAKHPERIN 422 A+ MQSIL P +GV AR TPC Y+PR QR++ VRCMA+D QNK+V TP TT P S PIS+ DV AFS PERIN Sbjct: 2 ATPAMQSILARPVSGVTARAR---FSQFTPCSYVPRLQRNAGMQVRCMAEDDQNKDV-TPITTPPP--TSQPISFPPPKPKVSTKFSDVLAFS-GPAPERIN 96
BLAST of DW043289 vs. TrEMBL
Match: B2BJD6|B2BJD6_RHOCT (Early light-induced protein 7 OS=Rhododendron catawbiense PE=2 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 1.096e-10 Identity = 48/102 (47.06%), Postives = 62/102 (60.78%), Query Frame = 3 Query: 147 MAASSVMQSILVSPATGVAKPARVVGLKPMTPCCYMPRQQRSSSRLVRCMAKDGQNKE---VETPATTS-------PKRLRSAPISYDVFAFSRAKHPERIN 422 MA SSVMQSILVSP GVAK L+P +MP Q+RSSS +VRC A++GQ ++ TP+T S P + +++ +DVFAFS PERIN Sbjct: 1 MATSSVMQSILVSPVAGVAKGLGSNRLRPAYR--HMPHQRRSSSVVVRCTAENGQKEQAVPAATPSTPSPLPIPPPPPKAKASTDFFDVFAFS-GPAPERIN 99
BLAST of DW043289 vs. TrEMBL
Match: B2BJD3|B2BJD3_RHOCT (Early light-induced protein 4 OS=Rhododendron catawbiense PE=2 SV=1) HSP 1 Score: 62.7734 bits (151), Expect = 1.750e-8 Identity = 35/52 (67.31%), Postives = 38/52 (73.08%), Query Frame = 3 Query: 147 MAASSVMQSILVSPATGVAKPARVVGLKPMTPCCYMPRQQRSSSRLVRCMAK 302 MA SSVMQSILVSP TGVAK A + P T CY+PRQ R+S LVRCMAK Sbjct: 1 MATSSVMQSILVSPVTGVAKGAGLSRTIPRT--CYLPRQGRNSGMLVRCMAK 50
BLAST of DW043289 vs. TrEMBL
Match: C9E439|C9E439_CAMSI (Putative early light induced protein 2 OS=Camellia sinensis GN=ELIP2 PE=2 SV=1) HSP 1 Score: 60.077 bits (144), Expect = 1.134e-7 Identity = 40/92 (43.48%), Postives = 48/92 (52.17%), Query Frame = 3 Query: 147 MAASSVMQSILVSPATGVAKPARVVGLKPMTPCCYMPRQQRSSSRLVRCMAKDGQNKEVETPATTSPKRLRSAPISYDVFAFSRAKHPERIN 422 MA S+ MQS+L P T V AR TPC Y+P Q+++S VRCMAK GQ ++V S K DV AFS PERIN Sbjct: 1 MATSATMQSVLARPVTSVTTRAR---FGQFTPCSYVPYLQKNASMQVRCMAKYGQKEDVTQKPKVSTK-------FSDVLAFS-GPAPERIN 81 The following BLAST results are available for this feature:
BLAST of DW043289 vs. Populus trichocarpa peptide v2.0
Analysis Date: 2011-01-18 (BLAST: Vaccinium corymbosum unigene v1 vs Populus trichocarpa v2.0 peptide) Total hits: 1
BLAST of DW043289 vs. TrEMBL
Analysis Date: 2011-01-18 (BLAST: Vaccinium corymbosum unigene v1 vs TrEMBL) Total hits: 9
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >DW043289 ID=DW043289; Name=DW043289; organism=Vaccinium corymbosum; type=EST; length=551bpback to top |