DW043289

EST Overview
NameDW043289
Unique NameDW043289
TypeEST
OrganismVaccinium corymbosum (northern highbush blueberry)
Sequence length551
Libraries
Library NameType
LIBEST_018810 Subtracted cDNA library of Vaccinium corymbosumcdna_library
Unigenes
This EST is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Vaccinium corymbosum unigene v1EST
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
Vaccinium corymbosum unigene v12011-01-18
BLAST: Vaccinium corymbosum unigene v1 vs Populus trichocarpa v2.0 peptide2011-01-18
BLAST: Vaccinium corymbosum unigene v1 vs TrEMBL2011-01-18
Homology
BLAST of DW043289 vs. Populus trichocarpa peptide v2.0
Match: POPTR_0008s15770.1 ()

HSP 1 Score: 50.447 bits (119), Expect = 8.149e-7
Identity = 36/94 (38.30%), Postives = 54/94 (57.45%), Query Frame = 3
Query:  147 MAASSVMQSILVSPATG--VAKPARVVGLKPMTPCCYMPRQQRSSSRLVRCMAKDGQNKEVETPATTSPKRLRSAPISYDVFAFSRAKHPERIN 422
            MA S+VMQ++L +P     V   +RV  L   T   Y+PR + S+S+ V+C   D Q K++  P++T   ++  +P   D+FAFS    PERIN
Sbjct:    1 MATSTVMQTVLATPVPSGLVKNRSRVSNLFSAT---YVPRLRGSASKRVQCSKLDDQIKKLAEPSSTPKPKV--SPKFLDLFAFS-GPAPERIN 88          
BLAST of DW043289 vs. TrEMBL
Match: B2BJD0|B2BJD0_RHOCT (Early light-induced protein 1 OS=Rhododendron catawbiense PE=2 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 4.301e-15
Identity = 52/93 (55.91%), Postives = 63/93 (67.74%), Query Frame = 3
Query:  147 MAASSVMQSILVSPATGVAKPARVVGLKPMTP-CCYMPRQQRSSSRLVRCMAKDGQNKEVETPATTSPKRLRSAPISYDVFAFSRAKHPERIN 422
            MA SSVMQSILVSP TGVAK A   GL    P  CY+PRQ R+S  LVRCMAKDG+ +EVE+P   +  ++R+    +D+ AFS    PERIN
Sbjct:    1 MATSSVMQSILVSPVTGVAKGA---GLSRTIPRSCYLPRQGRNSGMLVRCMAKDGRKEEVESPIEANVAKVRTD--FFDLLAFS-GPGPERIN 87          
BLAST of DW043289 vs. TrEMBL
Match: B2BJD1|B2BJD1_RHOCT (Early light-induced protein 2 OS=Rhododendron catawbiense PE=2 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 9.581e-15
Identity = 51/93 (54.84%), Postives = 63/93 (67.74%), Query Frame = 3
Query:  147 MAASSVMQSILVSPATGVAKPARVVGLKPMTP-CCYMPRQQRSSSRLVRCMAKDGQNKEVETPATTSPKRLRSAPISYDVFAFSRAKHPERIN 422
            MA SSVMQSILVSP TGVAK A   GL    P  CY+PRQ R+S  LVRCMAKDG+ +EVE+P   +  ++++    +D+ AFS    PERIN
Sbjct:    1 MATSSVMQSILVSPVTGVAKGA---GLNRTIPRSCYLPRQGRNSGMLVRCMAKDGRKEEVESPIEANVAKVKTD--FFDLLAFS-GPGPERIN 87          
BLAST of DW043289 vs. TrEMBL
Match: B2BJD4|B2BJD4_RHOCT (Early light-induced protein 5 OS=Rhododendron catawbiense PE=2 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 2.360e-13
Identity = 48/92 (52.17%), Postives = 59/92 (64.13%), Query Frame = 3
Query:  147 MAASSVMQSILVSPATGVAKPARVVGLKPMTPCCYMPRQQRSSSRLVRCMAKDGQNKEVETPATTSPKRLRSAPISYDVFAFSRAKHPERIN 422
            MA SSVMQSI+VSP TGVAK   +    P + CCY+PRQ R+S  LVRCMAK GQ +E  +P    PK    A + +D+ AF +   PERIN
Sbjct:    1 MATSSVMQSIMVSPVTGVAKGTGLSRTIPRS-CCYLPRQGRNSGMLVRCMAKGGQKEEAGSP----PK----AKVLFDLLAF-KGPAPERIN 82          
BLAST of DW043289 vs. TrEMBL
Match: B2BJD2|B2BJD2_RHOCT (Early light-induced protein 3 OS=Rhododendron catawbiense PE=2 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 2.360e-13
Identity = 51/93 (54.84%), Postives = 59/93 (63.44%), Query Frame = 3
Query:  147 MAASSVMQSILVSPATGVAKPARVVGLKPMTP-CCYMPRQQRSSSRLVRCMAKDGQNKEVETPATTSPKRLRSAPISYDVFAFSRAKHPERIN 422
            MA SSVMQSILVSP TGVAK A   GL    P   Y+PRQ R S  LVRCMAKDG+ +EVE+P   +  + R     +D+ AFS    PERIN
Sbjct:    1 MATSSVMQSILVSPVTGVAKGA---GLSRTIPRSSYLPRQGRDSGMLVRCMAKDGKKEEVESPVKATVAKARID--FFDLLAFS-GPGPERIN 87          
BLAST of DW043289 vs. TrEMBL
Match: B2BJD5|B2BJD5_RHOCT (Early light-induced protein 6 OS=Rhododendron catawbiense PE=2 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 3.768e-11
Identity = 50/95 (52.63%), Postives = 59/95 (62.11%), Query Frame = 3
Query:  147 MAASSVMQSILVSPATGVAKPARVVGLKPMT---PCCYMPRQQRSSSRLVRCMAKDGQNKEVETPATTSPKRLRSAPISYDVFAFSRAKHPERIN 422
            MA SSVMQSI+VSPATGVA   +  GL   T     CY+PRQ R+S  LVRCMAK GQ +EV     TSPK  +     +++ AFS    PERIN
Sbjct:    1 MATSSVMQSIMVSPATGVA--TKGTGLSRSTIPRSSCYLPRQGRNSGALVRCMAKGGQKEEV----GTSPK-AKVRTDFFNLLAFS-GPGPERIN 87          
BLAST of DW043289 vs. TrEMBL
Match: B2CZY6|B2CZY6_CAMSI (Putative cold-inducible protein OS=Camellia sinensis GN=ELIP1 PE=2 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.096e-10
Identity = 48/102 (47.06%), Postives = 56/102 (54.90%), Query Frame = 3
Query:  153 ASSVMQSILVSPATGVAKPARVVGLKPMTPCCYMPRQQRSSSRLVRCMAKDGQNKEVETPATTSPKRLRSAPISY------------DVFAFSRAKHPERIN 422
            A+  MQSIL  P +GV   AR       TPC Y+PR QR++   VRCMA+D QNK+V TP TT P    S PIS+            DV AFS    PERIN
Sbjct:    2 ATPAMQSILARPVSGVTARAR---FSQFTPCSYVPRLQRNAGMQVRCMAEDDQNKDV-TPITTPPP--TSQPISFPPPKPKVSTKFSDVLAFS-GPAPERIN 96          
BLAST of DW043289 vs. TrEMBL
Match: B2BJD6|B2BJD6_RHOCT (Early light-induced protein 7 OS=Rhododendron catawbiense PE=2 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.096e-10
Identity = 48/102 (47.06%), Postives = 62/102 (60.78%), Query Frame = 3
Query:  147 MAASSVMQSILVSPATGVAKPARVVGLKPMTPCCYMPRQQRSSSRLVRCMAKDGQNKE---VETPATTS-------PKRLRSAPISYDVFAFSRAKHPERIN 422
            MA SSVMQSILVSP  GVAK      L+P     +MP Q+RSSS +VRC A++GQ ++     TP+T S       P + +++   +DVFAFS    PERIN
Sbjct:    1 MATSSVMQSILVSPVAGVAKGLGSNRLRPAYR--HMPHQRRSSSVVVRCTAENGQKEQAVPAATPSTPSPLPIPPPPPKAKASTDFFDVFAFS-GPAPERIN 99          
BLAST of DW043289 vs. TrEMBL
Match: B2BJD3|B2BJD3_RHOCT (Early light-induced protein 4 OS=Rhododendron catawbiense PE=2 SV=1)

HSP 1 Score: 62.7734 bits (151), Expect = 1.750e-8
Identity = 35/52 (67.31%), Postives = 38/52 (73.08%), Query Frame = 3
Query:  147 MAASSVMQSILVSPATGVAKPARVVGLKPMTPCCYMPRQQRSSSRLVRCMAK 302
            MA SSVMQSILVSP TGVAK A +    P T  CY+PRQ R+S  LVRCMAK
Sbjct:    1 MATSSVMQSILVSPVTGVAKGAGLSRTIPRT--CYLPRQGRNSGMLVRCMAK 50          
BLAST of DW043289 vs. TrEMBL
Match: C9E439|C9E439_CAMSI (Putative early light induced protein 2 OS=Camellia sinensis GN=ELIP2 PE=2 SV=1)

HSP 1 Score: 60.077 bits (144), Expect = 1.134e-7
Identity = 40/92 (43.48%), Postives = 48/92 (52.17%), Query Frame = 3
Query:  147 MAASSVMQSILVSPATGVAKPARVVGLKPMTPCCYMPRQQRSSSRLVRCMAKDGQNKEVETPATTSPKRLRSAPISYDVFAFSRAKHPERIN 422
            MA S+ MQS+L  P T V   AR       TPC Y+P  Q+++S  VRCMAK GQ ++V      S K         DV AFS    PERIN
Sbjct:    1 MATSATMQSVLARPVTSVTTRAR---FGQFTPCSYVPYLQKNASMQVRCMAKYGQKEDVTQKPKVSTK-------FSDVLAFS-GPAPERIN 81          
The following BLAST results are available for this feature:
BLAST of DW043289 vs. Populus trichocarpa peptide v2.0
Analysis Date: 2011-01-18 (BLAST: Vaccinium corymbosum unigene v1 vs Populus trichocarpa v2.0 peptide)
Total hits: 1
Match NameE-valueIdentityDescription
POPTR_0008s15770.18.149e-738.30[more]
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BLAST of DW043289 vs. TrEMBL
Analysis Date: 2011-01-18 (BLAST: Vaccinium corymbosum unigene v1 vs TrEMBL)
Total hits: 9
Match NameE-valueIdentityDescription
B2BJD0|B2BJD0_RHOCT4.301e-1555.91Early light-induced protein 1 OS=Rhododendron cata... [more]
B2BJD1|B2BJD1_RHOCT9.581e-1554.84Early light-induced protein 2 OS=Rhododendron cata... [more]
B2BJD4|B2BJD4_RHOCT2.360e-1352.17Early light-induced protein 5 OS=Rhododendron cata... [more]
B2BJD2|B2BJD2_RHOCT2.360e-1354.84Early light-induced protein 3 OS=Rhododendron cata... [more]
B2BJD5|B2BJD5_RHOCT3.768e-1152.63Early light-induced protein 6 OS=Rhododendron cata... [more]
B2CZY6|B2CZY6_CAMSI1.096e-1047.06Putative cold-inducible protein OS=Camellia sinens... [more]
B2BJD6|B2BJD6_RHOCT1.096e-1047.06Early light-induced protein 7 OS=Rhododendron cata... [more]
B2BJD3|B2BJD3_RHOCT1.750e-867.31Early light-induced protein 4 OS=Rhododendron cata... [more]
C9E439|C9E439_CAMSI1.134e-743.48Putative early light induced protein 2 OS=Camellia... [more]
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Properties
Property NameValue
Singlet in analysisVaccinium corymbosum unigene v1
Sequences
The following sequences are available for this feature:

EST sequence

>DW043289 ID=DW043289; Name=DW043289; organism=Vaccinium corymbosum; type=EST; length=551bp
ACAGCCCTTATACGAGCGGCCGCCCGGGCAGGTACGCGGGGACAACTCAA
AACTTAACTTAACAGCCCTGAAGTGTGAAGTATCTACATAGCCATAGCCA
TAACACTCAGAAGCCTGTAACTCAAATCCCTAGCTAATACTCTACAATGG
CCGCCTCATCAGTAATGCAGTCCATTCTAGTGAGCCCGGCGACAGGTGTC
GCCAAGCCTGCGCGCGTGGTGGGATTGAAACCGATGACTCCTTGCTGCTA
TATGCCCCGTCAGCAGAGGAGCTCTAGCCGGCTAGTGCGGTGCATGGCCA
AGGATGGTCAGAATAAGGAAGTAGAAACTCCCGCCACGACGTCACCAAAA
AGGCTAAGGTCAGCACCGATTTCTTACGACGTGTTTGCATTCAGCCGGGC
CAAGCACCCGGAAAGAATCAACCGGCACCACTCGCCCATGATCCGGGCTT
TCGTTGGCCAGCAAATTANCTGGTGGGAACCTCTCAAGTGTGTGGTTCCA
GGAATGTTTGTTTTTGGCNTCAGAAATTTTTTTCCACCCGGGCGGGGGAA
T
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