DW043524 | GDV

EST Overview


Name	DW043524
Unique Name	DW043524
Type	EST
Organism	Vaccinium corymbosum (northern highbush blueberry)
Sequence length	538

Libraries


Library Name	Type
LIBEST_018810 Subtracted cDNA library of Vaccinium corymbosum	cdna_library

Unigenes

This EST is part of the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
	Vaccinium corymbosum unigene v1	EST

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
Vaccinium corymbosum unigene v1	2011-01-18
BLAST: Vaccinium corymbosum unigene v1 vs Ppersica v1.0 peptide	2011-01-18
BLAST: Vaccinium corymbosum unigene v1 vs Swissprot	2011-01-18
BLAST: Vaccinium corymbosum unigene v1 vs Populus trichocarpa v2.0 peptide	2011-01-18
BLAST: Vaccinium corymbosum unigene v1 vs TrEMBL	2011-01-18
BLAST: Vaccinium corymbosum unigene v1 vs Vitis vinifera peptide	2011-01-25
BLAST: Vaccinium corymbosum unigene v1 vs TAIR 10 peptide	2011-02-10
InterProScan analysis for Vaccinium corymbosum unigene v1	2011-01-18
KEGG analysis for Vaccinium corymbosum unigene v1	2011-01-18

Homology

[Close]

BLAST of DW043524 vs. DB:swissprot:display
Match: RL24_PRUAV (60S ribosomal protein L24 OS=Prunus avium GN=RPL24 PE=2 SV=1)

HSP 1 Score: 124.79 bits (312), Expect = 2.629e-28
Identity = 62/63 (98.41%), Postives = 63/63 (100.00%), Query Frame = 2

Query:    2 LTWTAMYRKQHKKDIAQEAVKKRRRTTKKPYSRSIVGATLEVIQKKRTEKPEVRDAAREAALR 190
            LTWTAMYRKQHKKDIAQEAVKKRRRTTKKPYSRSIVGATLEVIQK+RTEKPEVRDAAREAALR
Sbjct:   51 LTWTAMYRKQHKKDIAQEAVKKRRRTTKKPYSRSIVGATLEVIQKRRTEKPEVRDAAREAALR 113

[Close]

BLAST of DW043524 vs. DB:swissprot:display
Match: RL24_CICAR (60S ribosomal protein L24 OS=Cicer arietinum GN=RPL24 PE=2 SV=1)

HSP 1 Score: 120.553 bits (301), Expect = 4.958e-27
Identity = 60/63 (95.24%), Postives = 61/63 (96.83%), Query Frame = 2

Query:    2 LTWTAMYRKQHKKDIAQEAVKKRRRTTKKPYSRSIVGATLEVIQKKRTEKPEVRDAAREAALR 190
            LTWTAM+RKQHKKD AQEAVKKRRR TKKPYSRSIVGATLEVIQKKRTEKPEVRDAAREAALR
Sbjct:   51 LTWTAMFRKQHKKDAAQEAVKKRRRATKKPYSRSIVGATLEVIQKKRTEKPEVRDAAREAALR 113

[Close]

BLAST of DW043524 vs. DB:swissprot:display
Match: RL242_ARATH (60S ribosomal protein L24-2 OS=Arabidopsis thaliana GN=RPL24B PE=2 SV=2)

HSP 1 Score: 117.087 bits (292), Expect = 5.482e-26
Identity = 58/63 (92.06%), Postives = 59/63 (93.65%), Query Frame = 2

Query:    2 LTWTAMYRKQHKKDIAQEAVKKRRRTTKKPYSRSIVGATLEVIQKKRTEKPEVRDAAREAALR 190
            L WTAMYRKQHKKD AQEAVK+RRR TKKPYSRSIVGATLEVIQKKR EKPEVRDAAREAALR
Sbjct:   51 LAWTAMYRKQHKKDAAQEAVKRRRRATKKPYSRSIVGATLEVIQKKRAEKPEVRDAAREAALR 113

[Close]

BLAST of DW043524 vs. DB:swissprot:display
Match: RL241_ARATH (60S ribosomal protein L24-1 OS=Arabidopsis thaliana GN=RPL24A PE=1 SV=2)

HSP 1 Score: 116.701 bits (291), Expect = 7.159e-26
Identity = 58/63 (92.06%), Postives = 59/63 (93.65%), Query Frame = 2

Query:    2 LTWTAMYRKQHKKDIAQEAVKKRRRTTKKPYSRSIVGATLEVIQKKRTEKPEVRDAAREAALR 190
            L WTAMYRKQHKKD AQEAVK+RRR TKKPYSRSIVGATLEVIQKKR EKPEVRDAAREAALR
Sbjct:   51 LCWTAMYRKQHKKDAAQEAVKRRRRATKKPYSRSIVGATLEVIQKKRAEKPEVRDAAREAALR 113

[Close]

BLAST of DW043524 vs. DB:swissprot:display
Match: RL24_HORVU (60S ribosomal protein L24 OS=Hordeum vulgare GN=RPL24 PE=2 SV=1)

HSP 1 Score: 115.546 bits (288), Expect = 1.595e-25
Identity = 58/63 (92.06%), Postives = 58/63 (92.06%), Query Frame = 2

Query:    2 LTWTAMYRKQHKKDIAQEAVKKRRRTTKKPYSRSIVGATLEVIQKKRTEKPEVRDAAREAALR 190
            L WTAMYRKQHKKDI  EA KKRRRTTKKPYSRSIVGATLEVIQKKR EKPEVRDAAREAALR
Sbjct:   51 LCWTAMYRKQHKKDIHAEAAKKRRRTTKKPYSRSIVGATLEVIQKKRAEKPEVRDAAREAALR 113

[Close]

BLAST of DW043524 vs. DB:swissprot:display
Match: RL24B_SCHPO (60S ribosomal protein L24-B OS=Schizosaccharomyces pombe GN=rpl24b PE=1 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 9.078e-13
Identity = 36/63 (57.14%), Postives = 48/63 (76.19%), Query Frame = 2

Query:    2 LTWTAMYRKQHKKDIAQEAVKKRRRTTKKPYSRSIVGATLEVIQKKRTEKPEVRDAAREAALR 190
            L+WT +YR+ HKK I++E  KKR R T K + R IVGA L+VI++KR ++PEVR AAR AAL+
Sbjct:   49 LSWTVLYRRMHKKGISEEHAKKRTRRTVK-HQRGIVGANLDVIKEKRNQRPEVRAAARAAALK 110

[Close]

BLAST of DW043524 vs. DB:swissprot:display
Match: RL24A_SCHPO (60S ribosomal protein L24-A OS=Schizosaccharomyces pombe GN=rpl24a PE=2 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 9.078e-13
Identity = 36/63 (57.14%), Postives = 48/63 (76.19%), Query Frame = 2

Query:    2 LTWTAMYRKQHKKDIAQEAVKKRRRTTKKPYSRSIVGATLEVIQKKRTEKPEVRDAAREAALR 190
            L+WT +YR+ HKK I++E  KKR R T K + R IVGA L+VI++KR ++PEVR AAR AAL+
Sbjct:   49 LSWTVLYRRMHKKGISEEHAKKRTRRTVK-HQRGIVGANLDVIKEKRNQRPEVRAAARAAALK 110

[Close]

BLAST of DW043524 vs. DB:swissprot:display
Match: RL24_NEUCR (60S ribosomal protein L24 OS=Neurospora crassa GN=rpl-24 PE=3 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 4.505e-12
Identity = 34/63 (53.97%), Postives = 48/63 (76.19%), Query Frame = 2

Query:    2 LTWTAMYRKQHKKDIAQEAVKKRRRTTKKPYSRSIVGATLEVIQKKRTEKPEVRDAAREAALR 190
            + WT +YR+QHKK I++E  KKR R T K   R+IVGA+LEVI+++R+ +PE R AAR AA++
Sbjct:   49 IAWTVLYRRQHKKGISEEVAKKRSRRTVKA-QRAIVGASLEVIKERRSMRPEARSAARLAAIK 110

[Close]

BLAST of DW043524 vs. DB:swissprot:display
Match: RL24_DROME (60S ribosomal protein L24 OS=Drosophila melanogaster GN=RpL24 PE=1 SV=1)

HSP 1 Score: 67.0106 bits (162), Expect = 6.506e-11
Identity = 33/63 (52.38%), Postives = 46/63 (73.02%), Query Frame = 2

Query:    2 LTWTAMYRKQHKKDIAQEAVKKRRRTTKKPYSRSIVGATLEVIQKKRTEKPEVRDAAREAALR 190
            +TWT +YR++H+K I +EA KKR R T+K + R+IVGA+L  I  KR  KPEVR A R+ A++
Sbjct:   49 VTWTVLYRRKHRKGIEEEASKKRTRRTQK-FQRAIVGASLAEILAKRNMKPEVRKAQRDQAIK 110

[Close]

BLAST of DW043524 vs. DB:swissprot:display
Match: RL24_DEBHA (60S ribosomal protein L24 OS=Debaryomyces hansenii GN=RPL24 PE=3 SV=1)

HSP 1 Score: 66.6254 bits (161), Expect = 8.497e-11
Identity = 31/62 (50.00%), Postives = 48/62 (77.42%), Query Frame = 2

Query:    2 LTWTAMYRKQHKKDIAQEAVKKRRRTTKKPYSRSIVGATLEVIQKKRTEKPEVRDAAREAAL 187
            ++WT +YR+QHKK I++E+ K+R R T K   R+IVGA+LE+I+++R++KP  R AAR+  L
Sbjct:   49 ISWTVLYRRQHKKGISEESAKRRTRKTVK-NQRAIVGASLELIKERRSQKPSDRKAARDVKL 109

[Close]

BLAST of DW043524 vs. Populus trichocarpa peptide v2.0
Match: POPTR_0015s13330.1 ()

HSP 1 Score: 121.709 bits (304), Expect = 2.747e-28
Identity = 60/63 (95.24%), Postives = 61/63 (96.83%), Query Frame = 2

Query:    2 LTWTAMYRKQHKKDIAQEAVKKRRRTTKKPYSRSIVGATLEVIQKKRTEKPEVRDAAREAALR 190
            LTWTAMYRKQHKKDIA E +KKRRRTTKKPYSRSIVGATLEVIQKKRTEKPEVRDAAREAALR
Sbjct:   51 LTWTAMYRKQHKKDIAAETIKKRRRTTKKPYSRSIVGATLEVIQKKRTEKPEVRDAAREAALR 113

[Close]

BLAST of DW043524 vs. Populus trichocarpa peptide v2.0
Match: POPTR_0004s08370.1 ()

HSP 1 Score: 120.168 bits (300), Expect = 7.993e-28
Identity = 60/63 (95.24%), Postives = 60/63 (95.24%), Query Frame = 2

Query:    2 LTWTAMYRKQHKKDIAQEAVKKRRRTTKKPYSRSIVGATLEVIQKKRTEKPEVRDAAREAALR 190
            LTWTAMYRKQHKKDIA E VKKRRRTTKKPYSRSIVGATLEVIQKKR EKPEVRDAAREAALR
Sbjct:   51 LTWTAMYRKQHKKDIAAETVKKRRRTTKKPYSRSIVGATLEVIQKKRAEKPEVRDAAREAALR 113

[Close]

BLAST of DW043524 vs. Populus trichocarpa peptide v2.0
Match: POPTR_0012s13380.1 ()

HSP 1 Score: 119.783 bits (299), Expect = 1.044e-27
Identity = 59/63 (93.65%), Postives = 60/63 (95.24%), Query Frame = 2

Query:    2 LTWTAMYRKQHKKDIAQEAVKKRRRTTKKPYSRSIVGATLEVIQKKRTEKPEVRDAAREAALR 190
            LTWTAMYRKQHKKDIA E +KKRRR TKKPYSRSIVGATLEVIQKKRTEKPEVRDAAREAALR
Sbjct:   51 LTWTAMYRKQHKKDIAAETIKKRRRATKKPYSRSIVGATLEVIQKKRTEKPEVRDAAREAALR 113

[Close]

BLAST of DW043524 vs. Populus trichocarpa peptide v2.0
Match: POPTR_0003s12330.1 ()

HSP 1 Score: 119.398 bits (298), Expect = 1.363e-27
Identity = 59/63 (93.65%), Postives = 61/63 (96.83%), Query Frame = 2

Query:    2 LTWTAMYRKQHKKDIAQEAVKKRRRTTKKPYSRSIVGATLEVIQKKRTEKPEVRDAAREAALR 190
            LTWTAMYRKQHKKDIA EAVKK+RRTTKKPYSRSIVGATLEVIQK+R EKPEVRDAAREAALR
Sbjct:   51 LTWTAMYRKQHKKDIAAEAVKKKRRTTKKPYSRSIVGATLEVIQKRRAEKPEVRDAAREAALR 113

[Close]

BLAST of DW043524 vs. P. persica 1.0 peptide
Match: ppa012859m ()

HSP 1 Score: 124.79 bits (312), Expect = 2.343e-29
Identity = 62/63 (98.41%), Postives = 63/63 (100.00%), Query Frame = 2

Query:    2 LTWTAMYRKQHKKDIAQEAVKKRRRTTKKPYSRSIVGATLEVIQKKRTEKPEVRDAAREAALR 190
            LTWTAMYRKQHKKDIAQEAVKKRRRTTKKPYSRSIVGATLEVIQK+RTEKPEVRDAAREAALR
Sbjct:   51 LTWTAMYRKQHKKDIAQEAVKKRRRTTKKPYSRSIVGATLEVIQKRRTEKPEVRDAAREAALR 113

[Close]

BLAST of DW043524 vs. P. persica 1.0 peptide
Match: ppa012563m ()

HSP 1 Score: 124.79 bits (312), Expect = 2.343e-29
Identity = 62/63 (98.41%), Postives = 63/63 (100.00%), Query Frame = 2

Query:    2 LTWTAMYRKQHKKDIAQEAVKKRRRTTKKPYSRSIVGATLEVIQKKRTEKPEVRDAAREAALR 190
            LTWTAMYRKQHKKDIAQEAVKKRRRTTKKPYSRSIVGATLEVIQK+RTEKPEVRDAAREAALR
Sbjct:   51 LTWTAMYRKQHKKDIAQEAVKKRRRTTKKPYSRSIVGATLEVIQKRRTEKPEVRDAAREAALR 113

[Close]

BLAST of DW043524 vs. TrEMBL
Match: B9SRL5|B9SRL5_RICCO (60S ribosomal protein L24, putative OS=Ricinus communis GN=RCOM_0840480 PE=4 SV=1)

HSP 1 Score: 124.79 bits (312), Expect = 3.477e-27
Identity = 62/63 (98.41%), Postives = 63/63 (100.00%), Query Frame = 2

Query:    2 LTWTAMYRKQHKKDIAQEAVKKRRRTTKKPYSRSIVGATLEVIQKKRTEKPEVRDAAREAALR 190
            LTWTAMYRKQHKKDIAQEAVKKRRRTTKKPYSRSIVGATLEVIQK+RTEKPEVRDAAREAALR
Sbjct:   73 LTWTAMYRKQHKKDIAQEAVKKRRRTTKKPYSRSIVGATLEVIQKRRTEKPEVRDAAREAALR 135

[Close]

BLAST of DW043524 vs. TrEMBL
Match: Q1SN35|Q1SN35_MEDTR (Ribosomal protein L24E OS=Medicago truncatula GN=MtrDRAFT_AC139525g5v2 PE=4 SV=1)

HSP 1 Score: 122.479 bits (306), Expect = 1.726e-26
Identity = 61/63 (96.83%), Postives = 62/63 (98.41%), Query Frame = 2

Query:    2 LTWTAMYRKQHKKDIAQEAVKKRRRTTKKPYSRSIVGATLEVIQKKRTEKPEVRDAAREAALR 190
            LTWTAMYRKQHKKDIAQEAVKKRRR TKKPYSRSIVGATLEVIQKKR+EKPEVRDAAREAALR
Sbjct:   51 LTWTAMYRKQHKKDIAQEAVKKRRRATKKPYSRSIVGATLEVIQKKRSEKPEVRDAAREAALR 113

[Close]

BLAST of DW043524 vs. TrEMBL
Match: B7FGN9|B7FGN9_MEDTR (Putative uncharacterized protein OS=Medicago truncatula PE=2 SV=1)

HSP 1 Score: 122.479 bits (306), Expect = 1.726e-26
Identity = 61/63 (96.83%), Postives = 61/63 (96.83%), Query Frame = 2

Query:    2 LTWTAMYRKQHKKDIAQEAVKKRRRTTKKPYSRSIVGATLEVIQKKRTEKPEVRDAAREAALR 190
            LTWTAMYRKQHKKDIAQEAVKKRRR TKKPYSRSIVG TLEVIQKKRTEKPEVRDAAREAALR
Sbjct:   51 LTWTAMYRKQHKKDIAQEAVKKRRRATKKPYSRSIVGTTLEVIQKKRTEKPEVRDAAREAALR 113

[Close]

BLAST of DW043524 vs. TrEMBL
Match: C6SXT2|C6SXT2_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1)

HSP 1 Score: 122.094 bits (305), Expect = 2.254e-26
Identity = 61/63 (96.83%), Postives = 61/63 (96.83%), Query Frame = 2

Query:    2 LTWTAMYRKQHKKDIAQEAVKKRRRTTKKPYSRSIVGATLEVIQKKRTEKPEVRDAAREAALR 190
            LTWTAMYRKQHKKDIAQEAVKKRRR TKKPYSRSIVGATLEVIQKKRTEKPEVRDAAREA LR
Sbjct:   51 LTWTAMYRKQHKKDIAQEAVKKRRRATKKPYSRSIVGATLEVIQKKRTEKPEVRDAAREAQLR 113

[Close]

BLAST of DW043524 vs. TrEMBL
Match: B9ID62|B9ID62_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_824919 PE=4 SV=1)

HSP 1 Score: 121.709 bits (304), Expect = 2.944e-26
Identity = 60/63 (95.24%), Postives = 61/63 (96.83%), Query Frame = 2

Query:    2 LTWTAMYRKQHKKDIAQEAVKKRRRTTKKPYSRSIVGATLEVIQKKRTEKPEVRDAAREAALR 190
            LTWTAMYRKQHKKDIA E +KKRRRTTKKPYSRSIVGATLEVIQKKRTEKPEVRDAAREAALR
Sbjct:   51 LTWTAMYRKQHKKDIAAETIKKRRRTTKKPYSRSIVGATLEVIQKKRTEKPEVRDAAREAALR 113

[Close]

BLAST of DW043524 vs. TrEMBL
Match: B7FN60|B7FN60_MEDTR (Putative uncharacterized protein OS=Medicago truncatula PE=2 SV=1)

HSP 1 Score: 121.709 bits (304), Expect = 2.944e-26
Identity = 61/63 (96.83%), Postives = 61/63 (96.83%), Query Frame = 2

Query:    2 LTWTAMYRKQHKKDIAQEAVKKRRRTTKKPYSRSIVGATLEVIQKKRTEKPEVRDAAREAALR 190
            L WTAMYRKQHKKDIAQEAVKKRRR TKKPYSRSIVGATLEVIQKKRTEKPEVRDAAREAALR
Sbjct:   51 LIWTAMYRKQHKKDIAQEAVKKRRRATKKPYSRSIVGATLEVIQKKRTEKPEVRDAAREAALR 113

[Close]

BLAST of DW043524 vs. TrEMBL
Match: B9RC45|B9RC45_RICCO (60S ribosomal protein L24, putative OS=Ricinus communis GN=RCOM_1685040 PE=4 SV=1)

HSP 1 Score: 121.324 bits (303), Expect = 3.845e-26
Identity = 60/63 (95.24%), Postives = 62/63 (98.41%), Query Frame = 2

Query:    2 LTWTAMYRKQHKKDIAQEAVKKRRRTTKKPYSRSIVGATLEVIQKKRTEKPEVRDAAREAALR 190
            LTWTAMYRKQHKKDIA EAVKK+RRTTKKPYSRSIVGATLEVIQK+RTEKPEVRDAAREAALR
Sbjct:   51 LTWTAMYRKQHKKDIAAEAVKKKRRTTKKPYSRSIVGATLEVIQKRRTEKPEVRDAAREAALR 113

[Close]

BLAST of DW043524 vs. TrEMBL
Match: C6SZ00|C6SZ00_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1)

HSP 1 Score: 120.168 bits (300), Expect = 8.565e-26
Identity = 60/63 (95.24%), Postives = 60/63 (95.24%), Query Frame = 2

Query:    2 LTWTAMYRKQHKKDIAQEAVKKRRRTTKKPYSRSIVGATLEVIQKKRTEKPEVRDAAREAALR 190
            LTWTAMYRKQHKKDIAQEAVKKRRR  KKPYSRSIVGATLEVIQKKR EKPEVRDAAREAALR
Sbjct:   51 LTWTAMYRKQHKKDIAQEAVKKRRRAAKKPYSRSIVGATLEVIQKKRAEKPEVRDAAREAALR 113

[Close]

BLAST of DW043524 vs. TrEMBL
Match: B3TM46|B3TM46_ELAGV (60S ribosomal protein L24 OS=Elaeis guineensis var. tenera PE=2 SV=1)

HSP 1 Score: 120.168 bits (300), Expect = 8.565e-26
Identity = 60/63 (95.24%), Postives = 61/63 (96.83%), Query Frame = 2

Query:    2 LTWTAMYRKQHKKDIAQEAVKKRRRTTKKPYSRSIVGATLEVIQKKRTEKPEVRDAAREAALR 190
            LTWTAMYRKQHKKDI  EAVKKRRRTTKKPYSRSIVGATLEVIQK+RTEKPEVRDAAREAALR
Sbjct:   51 LTWTAMYRKQHKKDIHAEAVKKRRRTTKKPYSRSIVGATLEVIQKRRTEKPEVRDAAREAALR 113

[Close]

BLAST of DW043524 vs. TrEMBL
Match: A9PHF8|A9PHF8_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_813781 PE=2 SV=1)

HSP 1 Score: 120.168 bits (300), Expect = 8.565e-26
Identity = 60/63 (95.24%), Postives = 60/63 (95.24%), Query Frame = 2

Query:    2 LTWTAMYRKQHKKDIAQEAVKKRRRTTKKPYSRSIVGATLEVIQKKRTEKPEVRDAAREAALR 190
            LTWTAMYRKQHKKDIA E VKKRRRTTKKPYSRSIVGATLEVIQKKR EKPEVRDAAREAALR
Sbjct:   51 LTWTAMYRKQHKKDIAAETVKKRRRTTKKPYSRSIVGATLEVIQKKRAEKPEVRDAAREAALR 113

[Close]

BLAST of DW043524 vs. Vitis vinifera peptide
Match: GSVIVT01033743001 (assembled CDS)

HSP 1 Score: 119.783 bits (299), Expect = 6.466e-28
Identity = 60/63 (95.24%), Postives = 61/63 (96.83%), Query Frame = 2

Query:    2 LTWTAMYRKQHKKDIAQEAVKKRRRTTKKPYSRSIVGATLEVIQKKRTEKPEVRDAAREAALR 190
            LTWTAMYRKQHKKDIAQEAVKKRRR TKKPYSRSIVGATLEVIQK+RTEK EVRDAAREAALR
Sbjct:   51 LTWTAMYRKQHKKDIAQEAVKKRRRATKKPYSRSIVGATLEVIQKRRTEKAEVRDAAREAALR 113

[Close]

BLAST of DW043524 vs. Vitis vinifera peptide
Match: GSVIVT01010601001 (assembled CDS)

HSP 1 Score: 119.398 bits (298), Expect = 8.445e-28
Identity = 59/63 (93.65%), Postives = 61/63 (96.83%), Query Frame = 2

Query:    2 LTWTAMYRKQHKKDIAQEAVKKRRRTTKKPYSRSIVGATLEVIQKKRTEKPEVRDAAREAALR 190
            LTWTAMYRKQHKKDIA EAVKK+RRT KKPYSRSIVGATLEVIQK+RTEKPEVRDAAREAALR
Sbjct:   86 LTWTAMYRKQHKKDIAAEAVKKKRRTAKKPYSRSIVGATLEVIQKRRTEKPEVRDAAREAALR 148

[Close]

BLAST of DW043524 vs. Vitis vinifera peptide
Match: GSVIVT01034676001 (assembled CDS)

HSP 1 Score: 115.931 bits (289), Expect = 9.337e-27
Identity = 57/63 (90.48%), Postives = 59/63 (93.65%), Query Frame = 2

Query:    2 LTWTAMYRKQHKKDIAQEAVKKRRRTTKKPYSRSIVGATLEVIQKKRTEKPEVRDAAREAALR 190
            LTWTAMYRKQHKKDIA EAVKKRRR TKKP+SRSIVG TLE IQK+RTEKPEVRDAAREAALR
Sbjct:   51 LTWTAMYRKQHKKDIAAEAVKKRRRATKKPFSRSIVGTTLEAIQKRRTEKPEVRDAAREAALR 113

[Close]

BLAST of DW043524 vs. TAIR peptide
Match: AT3G53020.1 (| Symbols: STV1, RPL24B, RPL24 | Ribosomal protein L24e family protein | chr3:19660749-19661912 REVERSE LENGTH=163)

HSP 1 Score: 117.087 bits (292), Expect = 5.972e-27
Identity = 58/63 (92.06%), Postives = 59/63 (93.65%), Query Frame = 2

Query:    2 LTWTAMYRKQHKKDIAQEAVKKRRRTTKKPYSRSIVGATLEVIQKKRTEKPEVRDAAREAALR 190
            L WTAMYRKQHKKD AQEAVK+RRR TKKPYSRSIVGATLEVIQKKR EKPEVRDAAREAALR
Sbjct:   51 LAWTAMYRKQHKKDAAQEAVKRRRRATKKPYSRSIVGATLEVIQKKRAEKPEVRDAAREAALR 113

[Close]

BLAST of DW043524 vs. TAIR peptide
Match: AT2G36620.1 (| Symbols: RPL24A | ribosomal protein L24 | chr2:15350548-15351819 REVERSE LENGTH=164)

HSP 1 Score: 116.701 bits (291), Expect = 7.800e-27
Identity = 58/63 (92.06%), Postives = 59/63 (93.65%), Query Frame = 2

Query:    2 LTWTAMYRKQHKKDIAQEAVKKRRRTTKKPYSRSIVGATLEVIQKKRTEKPEVRDAAREAALR 190
            L WTAMYRKQHKKD AQEAVK+RRR TKKPYSRSIVGATLEVIQKKR EKPEVRDAAREAALR
Sbjct:   51 LCWTAMYRKQHKKDAAQEAVKRRRRATKKPYSRSIVGATLEVIQKKRAEKPEVRDAAREAALR 113

The following BLAST results are available for this feature:

BLAST of DW043524 vs. DB:swissprot:display
BLAST of DW043524 vs. Populus trichocarpa peptide v2.0
BLAST of DW043524 vs. P. persica 1.0 peptide
BLAST of DW043524 vs. TrEMBL
BLAST of DW043524 vs. Vitis vinifera peptide
BLAST of DW043524 vs. TAIR peptide

BLAST of DW043524 vs. DB:swissprot:display
Analysis Date: 2011-01-18 (BLAST: Vaccinium corymbosum unigene v1 vs Swissprot)
Total hits: 10


Match Name	E-value	Identity	Description
RL24_PRUAV	2.629e-28	98.41	60S ribosomal protein L24 OS=Prunus avium GN=RPL24...	[more]
RL24_CICAR	4.958e-27	95.24	60S ribosomal protein L24 OS=Cicer arietinum GN=RP...	[more]
RL242_ARATH	5.482e-26	92.06	60S ribosomal protein L24-2 OS=Arabidopsis thalian...	[more]
RL241_ARATH	7.159e-26	92.06	60S ribosomal protein L24-1 OS=Arabidopsis thalian...	[more]
RL24_HORVU	1.595e-25	92.06	60S ribosomal protein L24 OS=Hordeum vulgare GN=RP...	[more]
RL24B_SCHPO	9.078e-13	57.14	60S ribosomal protein L24-B OS=Schizosaccharomyces...	[more]
RL24A_SCHPO	9.078e-13	57.14	60S ribosomal protein L24-A OS=Schizosaccharomyces...	[more]
RL24_NEUCR	4.505e-12	53.97	60S ribosomal protein L24 OS=Neurospora crassa GN=...	[more]
RL24_DROME	6.506e-11	52.38	60S ribosomal protein L24 OS=Drosophila melanogast...	[more]
RL24_DEBHA	8.497e-11	50.00	60S ribosomal protein L24 OS=Debaryomyces hansenii...	[more]

BLAST of DW043524 vs. Populus trichocarpa peptide v2.0
Analysis Date: 2011-01-18 (BLAST: Vaccinium corymbosum unigene v1 vs Populus trichocarpa v2.0 peptide)
Total hits: 4


Match Name	E-value	Identity
POPTR_0015s13330.1	2.747e-28	95.24	[more]
POPTR_0004s08370.1	7.993e-28	95.24	[more]
POPTR_0012s13380.1	1.044e-27	93.65	[more]
POPTR_0003s12330.1	1.363e-27	93.65	[more]

BLAST of DW043524 vs. P. persica 1.0 peptide
Analysis Date: 2011-01-18 (BLAST: Vaccinium corymbosum unigene v1 vs Ppersica v1.0 peptide)
Total hits: 2


Match Name	E-value	Identity	Description
ppa012859m	2.343e-29	98.41		[more]
ppa012563m	2.343e-29	98.41		[more]

BLAST of DW043524 vs. TrEMBL
Analysis Date: 2011-01-18 (BLAST: Vaccinium corymbosum unigene v1 vs TrEMBL)
Total hits: 10


Match Name	E-value	Identity	Description
B9SRL5\|B9SRL5_RICCO	3.477e-27	98.41	60S ribosomal protein L24, putative OS=Ricinus com...	[more]
Q1SN35\|Q1SN35_MEDTR	1.726e-26	96.83	Ribosomal protein L24E OS=Medicago truncatula GN=M...	[more]
B7FGN9\|B7FGN9_MEDTR	1.726e-26	96.83	Putative uncharacterized protein OS=Medicago trunc...	[more]
C6SXT2\|C6SXT2_SOYBN	2.254e-26	96.83	Putative uncharacterized protein OS=Glycine max PE...	[more]
B9ID62\|B9ID62_POPTR	2.944e-26	95.24	Predicted protein OS=Populus trichocarpa GN=POPTRD...	[more]
B7FN60\|B7FN60_MEDTR	2.944e-26	96.83	Putative uncharacterized protein OS=Medicago trunc...	[more]
B9RC45\|B9RC45_RICCO	3.845e-26	95.24	60S ribosomal protein L24, putative OS=Ricinus com...	[more]
C6SZ00\|C6SZ00_SOYBN	8.565e-26	95.24	Putative uncharacterized protein OS=Glycine max PE...	[more]
B3TM46\|B3TM46_ELAGV	8.565e-26	95.24	60S ribosomal protein L24 OS=Elaeis guineensis var...	[more]
A9PHF8\|A9PHF8_POPTR	8.565e-26	95.24	Predicted protein OS=Populus trichocarpa GN=POPTRD...	[more]

BLAST of DW043524 vs. Vitis vinifera peptide
Analysis Date: 2011-01-25 (BLAST: Vaccinium corymbosum unigene v1 vs Vitis vinifera peptide)
Total hits: 3


Match Name	E-value	Identity	Description
GSVIVT01033743001	6.466e-28	95.24	assembled CDS	[more]
GSVIVT01010601001	8.445e-28	93.65	assembled CDS	[more]
GSVIVT01034676001	9.337e-27	90.48	assembled CDS	[more]

BLAST of DW043524 vs. TAIR peptide
Analysis Date: 2011-02-10 (BLAST: Vaccinium corymbosum unigene v1 vs TAIR 10 peptide)
Total hits: 2


Match Name	E-value	Identity	Description
AT3G53020.1	5.972e-27	92.06	\| Symbols: STV1, RPL24B, RPL24 \| Ribosomal protein...	[more]
AT2G36620.1	7.800e-27	92.06	\| Symbols: RPL24A \| ribosomal protein L24 \| chr2:1...	[more]

InterPro

Analysis Name: InterProScan analysis for Vaccinium corymbosum unigene v1
Date Performed: 2011-01-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000988	Ribosomal protein L24e	PANTHER	PTHR10792	60S RIBOSOMAL PROTEIN L24	coord: 1..66 score: 2
IPR000988	Ribosomal protein L24e	PFAM	PF01246	Ribosomal_L24e	coord: 1..23 score: 2.7
None	No IPR available	PANTHER	PTHR10792:SF1	60S RIBOSOMAL PROTEIN L24	coord: 1..66 score: 2
None	No IPR available	SEG	seg	seg	coord: 28..53 score: NAcoord: 61..79 score
None	No IPR available	SEG	seg	seg	coord: 42..56 score: NAcoord: 66..89 score
None	No IPR available	SEG	seg	seg	coord: 90..113 score

Properties


Property Name	Value
Singlet in analysis	Vaccinium corymbosum unigene v1

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>DW043524 ID=DW043524; Name=DW043524; organism=Vaccinium corymbosum; type=EST; length=538bp
GCTTACCTGGACAGCCATGTACAGGAAGCAACATAAGAAGGACATTGCTC
AAGAAGCTGTCAAGAAGAGGCGTCGCACTACCAAGAAGCCTTACTCGAGG
TCTATTGTAGGTGCTACTTTGGAGGTTATACAGAAGAAAAGGACTGAAAA
GCCTGAAGTTCGTGACGCTGCAAGGGAGGCAGCCCTCCGTGAAATTAAAG
GAGAGGATTAAGAAAACAAAGGATGAAAAGAAGGCGAAGAAAGCTGAGGT
GACTGCTAAGACCCAGAAGGCAGGCAAAGGTAACATATCCAAGGGTGCTG
CACCTAAGGGCCCCAAGCTTGGAGGTGGTGGTGGACAAGCGTTGAAAAGC
CTTATTGTCTCCTCCATTTCTCTTCCTGGTAAAAAAGAAAGCCTTAAAAA
ACCATTTGGTTTGAAGGGGTATTTGGTAATGTGGCCTGGGTTCCTTTCCG
CTACAACTTAGTGGTTTATTGCCTTTGAACCCAAATTCTAATTGGTCCCG
AAAACAAAAAAATCCACCGCCCCCCCATATTTTTTTTT

Annotated Terms

The following terms have been associated with this EST:

Vocabulary: **Molecular Function**
Term	Definition
GO:0003735	structural constituent of ribosome

Vocabulary: **Cellular Component**
Term	Definition
GO:0005622	intracellular anatomical structure
GO:0005840	ribosome

Vocabulary: **Biological Process**
Term	Definition
GO:0006412	translation

Vocabulary: **KEGG ORTHOLOGY**
Term	Definition
K02896	RP-L24e, RPL24; large subunit ribosomal protein L24e

Vocabulary: **KEGG PATHWAY**
Term	Definition
ko03010	Ribosome

Vocabulary: **INTERPRO**
Term	Definition
IPR000988	Ribosomal_eL24-rel
noIPR	unintegrated