CF811308 | GDV

EST Overview


Name	CF811308
Unique Name	CF811308
Type	EST
Organism	Vaccinium corymbosum (northern highbush blueberry)
Sequence length	487

Libraries


Library Name	Type
LIBEST_014531 cDNA non acclimated Bluecrop library	cdna_library

Unigenes

This EST is part of the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
	Vaccinium corymbosum unigene v1	EST

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
Vaccinium corymbosum unigene v1	2011-01-18
BLAST: Vaccinium corymbosum unigene v1 vs Populus trichocarpa v2.0 peptide	2011-01-18
BLAST: Vaccinium corymbosum unigene v1 vs Ppersica v1.0 peptide	2011-01-18
BLAST: Vaccinium corymbosum unigene v1 vs Swissprot	2011-01-18
BLAST: Vaccinium corymbosum unigene v1 vs TrEMBL	2011-01-18
BLAST: Vaccinium corymbosum unigene v1 vs Vitis vinifera peptide	2011-01-25
BLAST: Vaccinium corymbosum unigene v1 vs TAIR 10 peptide	2011-02-10
InterProScan analysis for Vaccinium corymbosum unigene v1	2011-01-18

Homology

[Close]

BLAST of CF811308 vs. DB:swissprot:display
Match: RBH1B_ARATH (Ras-related protein RABH1B OS=Arabidopsis thaliana GN=RABH1B PE=1 SV=1)

HSP 1 Score: 114.005 bits (284), Expect = 3.594e-25
Identity = 58/62 (93.55%), Postives = 61/62 (98.39%), Query Frame = 3

Query:    3 IEEAEAKARDMNVMFIETSAKAGFNIKALFRKIAAALPGMETLSSTKQEDMVDVNLKASNPN 188
            IEEAEAKAR++NVMFIETSAKAGFNIKALFRKIAAALPGMETLSSTKQEDMVDVNLK+SN N
Sbjct:  134 IEEAEAKARELNVMFIETSAKAGFNIKALFRKIAAALPGMETLSSTKQEDMVDVNLKSSNAN 195

[Close]

BLAST of CF811308 vs. DB:swissprot:display
Match: RAB6A_RAT (Ras-related protein Rab-6A (Fragment) OS=Rattus norvegicus GN=Rab6a PE=2 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 2.582e-15
Identity = 36/57 (63.16%), Postives = 48/57 (84.21%), Query Frame = 3

Query:    3 IEEAEAKARDMNVMFIETSAKAGFNIKALFRKIAAALPGMETLSSTKQEDMVDVNLK 173
            IEE E KA+++NVMFIETSAKAG+N+K LFR++AAALPGME+     +EDM+D+ L+
Sbjct:   70 IEEGERKAKELNVMFIETSAKAGYNVKQLFRRVAAALPGMESTQDRSREDMIDIKLE 126

[Close]

BLAST of CF811308 vs. DB:swissprot:display
Match: RAB6A_PONAB (Ras-related protein Rab-6A OS=Pongo abelii GN=RAB6A PE=2 SV=3)

HSP 1 Score: 81.2629 bits (199), Expect = 2.582e-15
Identity = 36/57 (63.16%), Postives = 48/57 (84.21%), Query Frame = 3

Query:    3 IEEAEAKARDMNVMFIETSAKAGFNIKALFRKIAAALPGMETLSSTKQEDMVDVNLK 173
            IEE E KA+++NVMFIETSAKAG+N+K LFR++AAALPGME+     +EDM+D+ L+
Sbjct:  138 IEEGERKAKELNVMFIETSAKAGYNVKQLFRRVAAALPGMESTQDRSREDMIDIKLE 194

[Close]

BLAST of CF811308 vs. DB:swissprot:display
Match: RAB6A_MOUSE (Ras-related protein Rab-6A OS=Mus musculus GN=Rab6a PE=1 SV=4)

HSP 1 Score: 81.2629 bits (199), Expect = 2.582e-15
Identity = 36/57 (63.16%), Postives = 48/57 (84.21%), Query Frame = 3

Query:    3 IEEAEAKARDMNVMFIETSAKAGFNIKALFRKIAAALPGMETLSSTKQEDMVDVNLK 173
            IEE E KA+++NVMFIETSAKAG+N+K LFR++AAALPGME+     +EDM+D+ L+
Sbjct:  138 IEEGERKAKELNVMFIETSAKAGYNVKQLFRRVAAALPGMESTQDRSREDMIDIKLE 194

[Close]

BLAST of CF811308 vs. DB:swissprot:display
Match: RAB6A_HUMAN (Ras-related protein Rab-6A OS=Homo sapiens GN=RAB6A PE=1 SV=3)

HSP 1 Score: 81.2629 bits (199), Expect = 2.582e-15
Identity = 36/57 (63.16%), Postives = 48/57 (84.21%), Query Frame = 3

Query:    3 IEEAEAKARDMNVMFIETSAKAGFNIKALFRKIAAALPGMETLSSTKQEDMVDVNLK 173
            IEE E KA+++NVMFIETSAKAG+N+K LFR++AAALPGME+     +EDM+D+ L+
Sbjct:  138 IEEGERKAKELNVMFIETSAKAGYNVKQLFRRVAAALPGMESTQDRSREDMIDIKLE 194

[Close]

BLAST of CF811308 vs. DB:swissprot:display
Match: RAB6A_CHICK (Ras-related protein Rab-6A OS=Gallus gallus GN=RAB6A PE=2 SV=3)

HSP 1 Score: 81.2629 bits (199), Expect = 2.582e-15
Identity = 36/57 (63.16%), Postives = 48/57 (84.21%), Query Frame = 3

Query:    3 IEEAEAKARDMNVMFIETSAKAGFNIKALFRKIAAALPGMETLSSTKQEDMVDVNLK 173
            IEE E KA+++NVMFIETSAKAG+N+K LFR++AAALPGME+     +EDM+D+ L+
Sbjct:  138 IEEGERKAKELNVMFIETSAKAGYNVKQLFRRVAAALPGMESTQDKSREDMIDIKLE 194

[Close]

BLAST of CF811308 vs. DB:swissprot:display
Match: RBH1C_ARATH (Ras-related protein RABH1C OS=Arabidopsis thaliana GN=RABH1C PE=1 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 3.728e-14
Identity = 40/61 (65.57%), Postives = 49/61 (80.33%), Query Frame = 3

Query:    3 IEEAEAKARDMNVMFIETSAKAGFNIKALFRKIAAALPGMETLS-STKQEDMVDVNLKASN 182
            I E E K ++  VMFIETSAK  FNIKALFRKIAAALPG+++ S +TK +DMVDVNLK ++
Sbjct:  135 ISEGEDKGKEYGVMFIETSAKENFNIKALFRKIAAALPGVDSYSLATKSDDMVDVNLKTTS 195

[Close]

BLAST of CF811308 vs. DB:swissprot:display
Match: RAB6C_HUMAN (Ras-related protein Rab-6C OS=Homo sapiens GN=RAB6C PE=2 SV=2)

HSP 1 Score: 73.1738 bits (178), Expect = 7.030e-13
Identity = 33/57 (57.89%), Postives = 44/57 (77.19%), Query Frame = 3

Query:    3 IEEAEAKARDMNVMFIETSAKAGFNIKALFRKIAAALPGMETLSSTKQEDMVDVNLK 173
            +EE E KA+ +NV FIET AKAG+N+K LFR++AAALPGME+     +EDM D+ L+
Sbjct:  138 VEEGERKAKGLNVTFIETRAKAGYNVKQLFRRVAAALPGMESTQDGSREDMSDIKLE 194

[Close]

BLAST of CF811308 vs. DB:swissprot:display
Match: RAB6B_MOUSE (Ras-related protein Rab-6B OS=Mus musculus GN=Rab6b PE=1 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 9.182e-13
Identity = 31/56 (55.36%), Postives = 45/56 (80.36%), Query Frame = 3

Query:    3 IEEAEAKARDMNVMFIETSAKAGFNIKALFRKIAAALPGMETLSSTKQEDMVDVNL 170
            IEE E +A++++VMFIETSAK G+N+K LFR++A+ALPGME +    +E M+D+ L
Sbjct:  138 IEEGEQRAKELSVMFIETSAKTGYNVKQLFRRVASALPGMENVQEKSKEGMIDIKL 193

[Close]

BLAST of CF811308 vs. DB:swissprot:display
Match: RAB6B_HUMAN (Ras-related protein Rab-6B OS=Homo sapiens GN=RAB6B PE=1 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 9.182e-13
Identity = 31/56 (55.36%), Postives = 45/56 (80.36%), Query Frame = 3

Query:    3 IEEAEAKARDMNVMFIETSAKAGFNIKALFRKIAAALPGMETLSSTKQEDMVDVNL 170
            IEE E +A++++VMFIETSAK G+N+K LFR++A+ALPGME +    +E M+D+ L
Sbjct:  138 IEEGEQRAKELSVMFIETSAKTGYNVKQLFRRVASALPGMENVQEKSKEGMIDIKL 193

[Close]

BLAST of CF811308 vs. Populus trichocarpa peptide v2.0
Match: POPTR_0002s13650.1 ()

HSP 1 Score: 112.464 bits (280), Expect = 1.359e-25
Identity = 57/62 (91.94%), Postives = 60/62 (96.77%), Query Frame = 3

Query:    3 IEEAEAKARDMNVMFIETSAKAGFNIKALFRKIAAALPGMETLSSTKQEDMVDVNLKASNPN 188
            IEE EAKARD+NVMFIETSAKAGFNIKALFRKIAAALPGMETLSS+KQEDMVDVNLK+SN N
Sbjct:  134 IEEGEAKARDLNVMFIETSAKAGFNIKALFRKIAAALPGMETLSSSKQEDMVDVNLKSSNAN 195

[Close]

BLAST of CF811308 vs. Populus trichocarpa peptide v2.0
Match: POPTR_0003s08490.1 ()

HSP 1 Score: 103.219 bits (256), Expect = 8.244e-23
Identity = 52/59 (88.14%), Postives = 56/59 (94.92%), Query Frame = 3

Query:    3 IEEAEAKARDMNVMFIETSAKAGFNIKALFRKIAAALPGMETLSSTKQEDMVDVNLKAS 179
            IEE EAKAR++NVMFIETSAKAGFNIK LFRKIAAALPGME LSSTKQEDMVDVNLK++
Sbjct:  105 IEEGEAKARELNVMFIETSAKAGFNIKPLFRKIAAALPGMEALSSTKQEDMVDVNLKST 163

[Close]

BLAST of CF811308 vs. Populus trichocarpa peptide v2.0
Match: POPTR_0005s07680.1 ()

HSP 1 Score: 98.5969 bits (244), Expect = 2.031e-21
Identity = 50/57 (87.72%), Postives = 52/57 (91.23%), Query Frame = 3

Query:    3 IEEAEAKARDMNVMFIETSAKAGFNIKALFRKIAAALPGMETLSSTKQEDMVDVNLK 173
            IEE + KAR+  VMFIETSAKAGFNIK LFRKIAAALPGMETLSSTKQEDMVDVNLK
Sbjct:  134 IEEGDGKAREFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEDMVDVNLK 190

[Close]

BLAST of CF811308 vs. P. persica 1.0 peptide
Match: ppa011501m ()

HSP 1 Score: 112.464 bits (280), Expect = 9.712e-26
Identity = 57/62 (91.94%), Postives = 60/62 (96.77%), Query Frame = 3

Query:    3 IEEAEAKARDMNVMFIETSAKAGFNIKALFRKIAAALPGMETLSSTKQEDMVDVNLKASNPN 188
            IEE EAKAR++NVMFIETSAKAGFNIKALFRKIAAALPGMETLSSTKQEDMVDVNLK+SN N
Sbjct:  134 IEEGEAKARELNVMFIETSAKAGFNIKALFRKIAAALPGMETLSSTKQEDMVDVNLKSSNAN 195

[Close]

BLAST of CF811308 vs. P. persica 1.0 peptide
Match: ppa011535m ()

HSP 1 Score: 106.686 bits (265), Expect = 5.329e-24
Identity = 53/59 (89.83%), Postives = 57/59 (96.61%), Query Frame = 3

Query:    3 IEEAEAKARDMNVMFIETSAKAGFNIKALFRKIAAALPGMETLSSTKQEDMVDVNLKAS 179
            +EE EAK RD+NVMFIETSAKAGFNIKALFRKIAAALPGMETLSSTKQEDMVDVNLK++
Sbjct:  134 VEEGEAKGRDLNVMFIETSAKAGFNIKALFRKIAAALPGMETLSSTKQEDMVDVNLKST 192

[Close]

BLAST of CF811308 vs. P. persica 1.0 peptide
Match: ppa011539m ()

HSP 1 Score: 95.9005 bits (237), Expect = 9.407e-21
Identity = 48/57 (84.21%), Postives = 52/57 (91.23%), Query Frame = 3

Query:    3 IEEAEAKARDMNVMFIETSAKAGFNIKALFRKIAAALPGMETLSSTKQEDMVDVNLK 173
            IEE ++K+R+  VMFIETSAKAGFNIK LFRKIAAALPGME LSSTKQEDMVDVNLK
Sbjct:  134 IEEGDSKSREFGVMFIETSAKAGFNIKPLFRKIAAALPGMEALSSTKQEDMVDVNLK 190

[Close]

BLAST of CF811308 vs. TrEMBL
Match: D7LLN6|D7LLN6_ARALY (Putative uncharacterized protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_903887 PE=4 SV=1)

HSP 1 Score: 114.005 bits (284), Expect = 4.988e-24
Identity = 58/62 (93.55%), Postives = 61/62 (98.39%), Query Frame = 3

Query:    3 IEEAEAKARDMNVMFIETSAKAGFNIKALFRKIAAALPGMETLSSTKQEDMVDVNLKASNPN 188
            IEEAEAKAR++NVMFIETSAKAGFNIKALFRKIAAALPGMETLSSTKQEDMVDVNLK+SN N
Sbjct:  134 IEEAEAKARELNVMFIETSAKAGFNIKALFRKIAAALPGMETLSSTKQEDMVDVNLKSSNAN 195

[Close]

BLAST of CF811308 vs. TrEMBL
Match: B9SKH4|B9SKH4_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0658840 PE=3 SV=1)

HSP 1 Score: 114.005 bits (284), Expect = 4.988e-24
Identity = 58/62 (93.55%), Postives = 60/62 (96.77%), Query Frame = 3

Query:    3 IEEAEAKARDMNVMFIETSAKAGFNIKALFRKIAAALPGMETLSSTKQEDMVDVNLKASNPN 188
            IEE EAKARD+NVMFIETSAKAGFNIKALFRKIAAALPGMETLSSTKQEDMVDVNLK+SN N
Sbjct:  134 IEEGEAKARDLNVMFIETSAKAGFNIKALFRKIAAALPGMETLSSTKQEDMVDVNLKSSNTN 195

[Close]

BLAST of CF811308 vs. TrEMBL
Match: B9GP45|B9GP45_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_816507 PE=3 SV=1)

HSP 1 Score: 112.464 bits (280), Expect = 1.451e-23
Identity = 57/62 (91.94%), Postives = 60/62 (96.77%), Query Frame = 3

Query:    3 IEEAEAKARDMNVMFIETSAKAGFNIKALFRKIAAALPGMETLSSTKQEDMVDVNLKASNPN 188
            IEE EAKARD+NVMFIETSAKAGFNIKALFRKIAAALPGMETLSS+KQEDMVDVNLK+SN N
Sbjct:  134 IEEGEAKARDLNVMFIETSAKAGFNIKALFRKIAAALPGMETLSSSKQEDMVDVNLKSSNAN 195

[Close]

BLAST of CF811308 vs. TrEMBL
Match: D7SM46|D7SM46_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_21.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00018361001 PE=4 SV=1)

HSP 1 Score: 112.079 bits (279), Expect = 1.895e-23
Identity = 57/62 (91.94%), Postives = 59/62 (95.16%), Query Frame = 3

Query:    3 IEEAEAKARDMNVMFIETSAKAGFNIKALFRKIAAALPGMETLSSTKQEDMVDVNLKASNPN 188
            IEE EAKARD+NVMFIETSAKAGFNIKALFRKIAAALPGMETLSS KQEDMVDVNLK+SN N
Sbjct:  105 IEEGEAKARDLNVMFIETSAKAGFNIKALFRKIAAALPGMETLSSAKQEDMVDVNLKSSNTN 166

[Close]

BLAST of CF811308 vs. TrEMBL
Match: Q40525|Q40525_TOBAC (Nt-rab6 protein OS=Nicotiana tabacum GN=Nt-rab6 PE=2 SV=1)

HSP 1 Score: 110.153 bits (274), Expect = 7.203e-23
Identity = 56/62 (90.32%), Postives = 59/62 (95.16%), Query Frame = 3

Query:    3 IEEAEAKARDMNVMFIETSAKAGFNIKALFRKIAAALPGMETLSSTKQEDMVDVNLKASNPN 188
            IEEAEAKAR++NVMFIETSAKAGFNIK LFRKIAAALPGMETLSS KQEDMVDVNLK+SN N
Sbjct:  134 IEEAEAKARELNVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSAKQEDMVDVNLKSSNAN 195

[Close]

BLAST of CF811308 vs. TrEMBL
Match: B9SS18|B9SS18_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0519920 PE=3 SV=1)

HSP 1 Score: 108.997 bits (271), Expect = 1.605e-22
Identity = 55/60 (91.67%), Postives = 59/60 (98.33%), Query Frame = 3

Query:    3 IEEAEAKARDMNVMFIETSAKAGFNIKALFRKIAAALPGMETLSSTKQEDMVDVNLKASN 182
            IEE EAKARD+NVMFIETSAKAGFNIKALFRKIAAALPGMETLSSTKQEDMVDVNLK+++
Sbjct:  134 IEEGEAKARDLNVMFIETSAKAGFNIKALFRKIAAALPGMETLSSTKQEDMVDVNLKSTS 193

[Close]

BLAST of CF811308 vs. TrEMBL
Match: C6TFH1|C6TFH1_SOYBN (Putative uncharacterized protein (Fragment) OS=Glycine max PE=2 SV=1)

HSP 1 Score: 107.457 bits (267), Expect = 4.669e-22
Identity = 54/60 (90.00%), Postives = 58/60 (96.67%), Query Frame = 3

Query:    3 IEEAEAKARDMNVMFIETSAKAGFNIKALFRKIAAALPGMETLSSTKQEDMVDVNLKASN 182
            IEE EAKAR++NVMFIETSAKAGFNIKALFRKIAAALPGMETLSS KQEDMVDVNLK++N
Sbjct:  134 IEEGEAKARELNVMFIETSAKAGFNIKALFRKIAAALPGMETLSSAKQEDMVDVNLKSTN 193

[Close]

BLAST of CF811308 vs. TrEMBL
Match: Q8H4Q9|Q8H4Q9_ORYSJ (GTP-binding protein Rab6 OS=Oryza sativa subsp. japonica GN=OJ1457_D07.114 PE=3 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 6.097e-22
Identity = 54/62 (87.10%), Postives = 57/62 (91.94%), Query Frame = 3

Query:    3 IEEAEAKARDMNVMFIETSAKAGFNIKALFRKIAAALPGMETLSSTKQEDMVDVNLKASNPN 188
            IEE E KA+D+ VMFIETSAKAGFNIKALFRKIAAALPGMETLSS KQEDMVDVNLK+SN N
Sbjct:  134 IEEGEGKAKDLGVMFIETSAKAGFNIKALFRKIAAALPGMETLSSAKQEDMVDVNLKSSNAN 195

[Close]

BLAST of CF811308 vs. TrEMBL
Match: B9FXC5|B9FXC5_ORYSJ (Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_24329 PE=3 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 6.097e-22
Identity = 54/62 (87.10%), Postives = 57/62 (91.94%), Query Frame = 3

Query:    3 IEEAEAKARDMNVMFIETSAKAGFNIKALFRKIAAALPGMETLSSTKQEDMVDVNLKASNPN 188
            IEE E KA+D+ VMFIETSAKAGFNIKALFRKIAAALPGMETLSS KQEDMVDVNLK+SN N
Sbjct:  170 IEEGEGKAKDLGVMFIETSAKAGFNIKALFRKIAAALPGMETLSSAKQEDMVDVNLKSSNAN 231

[Close]

BLAST of CF811308 vs. TrEMBL
Match: B8B6D3|B8B6D3_ORYSI (Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_26083 PE=3 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 6.097e-22
Identity = 54/62 (87.10%), Postives = 57/62 (91.94%), Query Frame = 3

Query:    3 IEEAEAKARDMNVMFIETSAKAGFNIKALFRKIAAALPGMETLSSTKQEDMVDVNLKASNPN 188
            IEE E KA+D+ VMFIETSAKAGFNIKALFRKIAAALPGMETLSS KQEDMVDVNLK+SN N
Sbjct:  170 IEEGEGKAKDLGVMFIETSAKAGFNIKALFRKIAAALPGMETLSSAKQEDMVDVNLKSSNAN 231

[Close]

BLAST of CF811308 vs. Vitis vinifera peptide
Match: GSVIVT01018361001 (assembled CDS)

HSP 1 Score: 112.079 bits (279), Expect = 1.092e-25
Identity = 57/62 (91.94%), Postives = 59/62 (95.16%), Query Frame = 3

Query:    3 IEEAEAKARDMNVMFIETSAKAGFNIKALFRKIAAALPGMETLSSTKQEDMVDVNLKASNPN 188
            IEE EAKARD+NVMFIETSAKAGFNIKALFRKIAAALPGMETLSS KQEDMVDVNLK+SN N
Sbjct:  105 IEEGEAKARDLNVMFIETSAKAGFNIKALFRKIAAALPGMETLSSAKQEDMVDVNLKSSNTN 166

[Close]

BLAST of CF811308 vs. Vitis vinifera peptide
Match: GSVIVT01013222001 (assembled CDS)

HSP 1 Score: 106.686 bits (265), Expect = 4.586e-24
Identity = 54/60 (90.00%), Postives = 58/60 (96.67%), Query Frame = 3

Query:    3 IEEAEAKARDMNVMFIETSAKAGFNIKALFRKIAAALPGMETLSSTKQEDMVDVNLKASN 182
            IEE EAKAR++NVMFIETSAKAGFNIKALFRKIAAALPGMETLSS KQEDMVDVNLK+S+
Sbjct:  105 IEEGEAKARELNVMFIETSAKAGFNIKALFRKIAAALPGMETLSSAKQEDMVDVNLKSSS 164

[Close]

BLAST of CF811308 vs. Vitis vinifera peptide
Match: GSVIVT01002273001 (assembled CDS)

HSP 1 Score: 98.9821 bits (245), Expect = 9.563e-22
Identity = 50/59 (84.75%), Postives = 53/59 (89.83%), Query Frame = 3

Query:    3 IEEAEAKARDMNVMFIETSAKAGFNIKALFRKIAAALPGMETLSSTKQEDMVDVNLKAS 179
            IEE + K+RD  VMFIETSAKAGFNIK LFRKIA+ALPGMETLSSTKQEDMVDVNLK S
Sbjct:  105 IEEGDTKSRDFGVMFIETSAKAGFNIKPLFRKIASALPGMETLSSTKQEDMVDVNLKPS 163

[Close]

BLAST of CF811308 vs. Vitis vinifera peptide
Match: GSVIVT01013213001 (assembled CDS)

HSP 1 Score: 95.5153 bits (236), Expect = 1.057e-20
Identity = 49/58 (84.48%), Postives = 55/58 (94.83%), Query Frame = 3

Query:    3 IEEAEAKARDMNVMFIETSAKAGFNIKALFRKIAAALPGMETLSSTKQEDMVDVNLKA 176
            IEE EAKAR++N+MFI+TSAKAGFNIKALF+KI AALPGMETLSS KQEDMVDVNLK+
Sbjct:   31 IEEGEAKARELNIMFIDTSAKAGFNIKALFQKI-AALPGMETLSSAKQEDMVDVNLKS 87

[Close]

BLAST of CF811308 vs. TAIR peptide
Match: AT2G44610.1 (| Symbols: RAB6, ATRABH1B, ATRAB6A, RAB6A | Ras-related small GTP-binding family protein | chr2:18411778-18413883 REVERSE LENGTH=208)

HSP 1 Score: 114.005 bits (284), Expect = 4.130e-26
Identity = 58/62 (93.55%), Postives = 61/62 (98.39%), Query Frame = 3

Query:    3 IEEAEAKARDMNVMFIETSAKAGFNIKALFRKIAAALPGMETLSSTKQEDMVDVNLKASNPN 188
            IEEAEAKAR++NVMFIETSAKAGFNIKALFRKIAAALPGMETLSSTKQEDMVDVNLK+SN N
Sbjct:  134 IEEAEAKARELNVMFIETSAKAGFNIKALFRKIAAALPGMETLSSTKQEDMVDVNLKSSNAN 195

[Close]

BLAST of CF811308 vs. TAIR peptide
Match: AT5G10260.1 (| Symbols: AtRABH1e, RABH1e | RAB GTPase homolog H1E | chr5:3219991-3221301 FORWARD LENGTH=207)

HSP 1 Score: 99.3673 bits (246), Expect = 1.053e-21
Identity = 51/60 (85.00%), Postives = 54/60 (90.00%), Query Frame = 3

Query:    3 IEEAEAKARDMNVMFIETSAKAGFNIKALFRKIAAALPGMETLSSTKQEDMVDVNLKASN 182
            IEE + KARD  V+FIETSAKAGFNIK LFRKIAAALPGMETLSSTKQEDMVDVNLK S+
Sbjct:  134 IEEGDNKARDYGVIFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEDMVDVNLKTSS 193

[Close]

BLAST of CF811308 vs. TAIR peptide
Match: AT2G22290.1 (| Symbols: ATRABH1D, ATRAB-H1D, RAB-H1D, ATRAB6, RABH1d | RAB GTPase homolog H1D | chr2:9466568-9467688 FORWARD LENGTH=207)

HSP 1 Score: 90.8929 bits (224), Expect = 3.744e-19
Identity = 45/60 (75.00%), Postives = 52/60 (86.67%), Query Frame = 3

Query:    3 IEEAEAKARDMNVMFIETSAKAGFNIKALFRKIAAALPGMETLSSTKQEDMVDVNLKASN 182
            IEE ++K R+  VMFIETSAKAGFNIK LFRKIAAALPGME+ S+TK EDMVDVNLK ++
Sbjct:  134 IEEGDSKGREYGVMFIETSAKAGFNIKPLFRKIAAALPGMESYSNTKNEDMVDVNLKPTS 193

[Close]

BLAST of CF811308 vs. TAIR peptide
Match: AT4G39890.1 (| Symbols: AtRABH1c, RABH1c | RAB GTPase homolog H1C | chr4:18506112-18507459 FORWARD LENGTH=214)

HSP 1 Score: 77.411 bits (189), Expect = 4.284e-15
Identity = 40/61 (65.57%), Postives = 49/61 (80.33%), Query Frame = 3

Query:    3 IEEAEAKARDMNVMFIETSAKAGFNIKALFRKIAAALPGMETLS-STKQEDMVDVNLKASN 182
            I E E K ++  VMFIETSAK  FNIKALFRKIAAALPG+++ S +TK +DMVDVNLK ++
Sbjct:  135 ISEGEDKGKEYGVMFIETSAKENFNIKALFRKIAAALPGVDSYSLATKSDDMVDVNLKTTS 195

[Close]

BLAST of CF811308 vs. TAIR peptide
Match: AT5G64990.2 (| Symbols: RABH1a | RAB GTPase homolog H1A | chr5:25963562-25964792 REVERSE LENGTH=213)

HSP 1 Score: 76.6406 bits (187), Expect = 7.308e-15
Identity = 39/57 (68.42%), Postives = 45/57 (78.95%), Query Frame = 3

Query:    3 IEEAEAKARDMNVMFIETSAKAGFNIKALFRKIAAALPGMETLSSTKQEDMVDVNLK 173
            IEE E KAR+   +F+ETSAKAGFNIK LF KI +AL G E +S TKQED+VDVNLK
Sbjct:  139 IEEGENKAREFGALFMETSAKAGFNIKPLFCKITSALQGNEAVSWTKQEDLVDVNLK 195

[Close]

BLAST of CF811308 vs. TAIR peptide
Match: AT5G64990.1 (| Symbols: AtRABH1a, RABH1a | RAB GTPase homolog H1A | chr5:25963562-25964792 REVERSE LENGTH=206)

HSP 1 Score: 76.6406 bits (187), Expect = 7.308e-15
Identity = 39/57 (68.42%), Postives = 45/57 (78.95%), Query Frame = 3

Query:    3 IEEAEAKARDMNVMFIETSAKAGFNIKALFRKIAAALPGMETLSSTKQEDMVDVNLK 173
            IEE E KAR+   +F+ETSAKAGFNIK LF KI +AL G E +S TKQED+VDVNLK
Sbjct:  132 IEEGENKAREFGALFMETSAKAGFNIKPLFCKITSALQGNEAVSWTKQEDLVDVNLK 188

The following BLAST results are available for this feature:

BLAST of CF811308 vs. DB:swissprot:display
BLAST of CF811308 vs. Populus trichocarpa peptide v2.0
BLAST of CF811308 vs. P. persica 1.0 peptide
BLAST of CF811308 vs. TrEMBL
BLAST of CF811308 vs. Vitis vinifera peptide
BLAST of CF811308 vs. TAIR peptide

BLAST of CF811308 vs. DB:swissprot:display
Analysis Date: 2011-01-18 (BLAST: Vaccinium corymbosum unigene v1 vs Swissprot)
Total hits: 10


Match Name	E-value	Identity	Description
RBH1B_ARATH	3.594e-25	93.55	Ras-related protein RABH1B OS=Arabidopsis thaliana...	[more]
RAB6A_RAT	2.582e-15	63.16	Ras-related protein Rab-6A (Fragment) OS=Rattus no...	[more]
RAB6A_PONAB	2.582e-15	63.16	Ras-related protein Rab-6A OS=Pongo abelii GN=RAB6...	[more]
RAB6A_MOUSE	2.582e-15	63.16	Ras-related protein Rab-6A OS=Mus musculus GN=Rab6...	[more]
RAB6A_HUMAN	2.582e-15	63.16	Ras-related protein Rab-6A OS=Homo sapiens GN=RAB6...	[more]
RAB6A_CHICK	2.582e-15	63.16	Ras-related protein Rab-6A OS=Gallus gallus GN=RAB...	[more]
RBH1C_ARATH	3.728e-14	65.57	Ras-related protein RABH1C OS=Arabidopsis thaliana...	[more]
RAB6C_HUMAN	7.030e-13	57.89	Ras-related protein Rab-6C OS=Homo sapiens GN=RAB6...	[more]
RAB6B_MOUSE	9.182e-13	55.36	Ras-related protein Rab-6B OS=Mus musculus GN=Rab6...	[more]
RAB6B_HUMAN	9.182e-13	55.36	Ras-related protein Rab-6B OS=Homo sapiens GN=RAB6...	[more]

BLAST of CF811308 vs. Populus trichocarpa peptide v2.0
Analysis Date: 2011-01-18 (BLAST: Vaccinium corymbosum unigene v1 vs Populus trichocarpa v2.0 peptide)
Total hits: 3


Match Name	E-value	Identity
POPTR_0002s13650.1	1.359e-25	91.94	[more]
POPTR_0003s08490.1	8.244e-23	88.14	[more]
POPTR_0005s07680.1	2.031e-21	87.72	[more]

BLAST of CF811308 vs. P. persica 1.0 peptide
Analysis Date: 2011-01-18 (BLAST: Vaccinium corymbosum unigene v1 vs Ppersica v1.0 peptide)
Total hits: 3


Match Name	E-value	Identity
ppa011501m	9.712e-26	91.94	[more]
ppa011535m	5.329e-24	89.83	[more]
ppa011539m	9.407e-21	84.21	[more]

BLAST of CF811308 vs. TrEMBL
Analysis Date: 2011-01-18 (BLAST: Vaccinium corymbosum unigene v1 vs TrEMBL)
Total hits: 10


Match Name	E-value	Identity	Description
D7LLN6\|D7LLN6_ARALY	4.988e-24	93.55	Putative uncharacterized protein OS=Arabidopsis ly...	[more]
B9SKH4\|B9SKH4_RICCO	4.988e-24	93.55	Putative uncharacterized protein OS=Ricinus commun...	[more]
B9GP45\|B9GP45_POPTR	1.451e-23	91.94	Predicted protein OS=Populus trichocarpa GN=POPTRD...	[more]
D7SM46\|D7SM46_VITVI	1.895e-23	91.94	Whole genome shotgun sequence of line PN40024, sca...	[more]
Q40525\|Q40525_TOBAC	7.203e-23	90.32	Nt-rab6 protein OS=Nicotiana tabacum GN=Nt-rab6 PE...	[more]
B9SS18\|B9SS18_RICCO	1.605e-22	91.67	Putative uncharacterized protein OS=Ricinus commun...	[more]
C6TFH1\|C6TFH1_SOYBN	4.669e-22	90.00	Putative uncharacterized protein (Fragment) OS=Gly...	[more]
Q8H4Q9\|Q8H4Q9_ORYSJ	6.097e-22	87.10	GTP-binding protein Rab6 OS=Oryza sativa subsp. ja...	[more]
B9FXC5\|B9FXC5_ORYSJ	6.097e-22	87.10	Putative uncharacterized protein OS=Oryza sativa s...	[more]
B8B6D3\|B8B6D3_ORYSI	6.097e-22	87.10	Putative uncharacterized protein OS=Oryza sativa s...	[more]

BLAST of CF811308 vs. Vitis vinifera peptide
Analysis Date: 2011-01-25 (BLAST: Vaccinium corymbosum unigene v1 vs Vitis vinifera peptide)
Total hits: 4


Match Name	E-value	Identity	Description
GSVIVT01018361001	1.092e-25	91.94	assembled CDS	[more]
GSVIVT01013222001	4.586e-24	90.00	assembled CDS	[more]
GSVIVT01002273001	9.563e-22	84.75	assembled CDS	[more]
GSVIVT01013213001	1.057e-20	84.48	assembled CDS	[more]

BLAST of CF811308 vs. TAIR peptide
Analysis Date: 2011-02-10 (BLAST: Vaccinium corymbosum unigene v1 vs TAIR 10 peptide)
Total hits: 6


Match Name	E-value	Identity	Description
AT2G44610.1	4.130e-26	93.55	\| Symbols: RAB6, ATRABH1B, ATRAB6A, RAB6A \| Ras-re...	[more]
AT5G10260.1	1.053e-21	85.00	\| Symbols: AtRABH1e, RABH1e \| RAB GTPase homolog H...	[more]
AT2G22290.1	3.744e-19	75.00	\| Symbols: ATRABH1D, ATRAB-H1D, RAB-H1D, ATRAB6, R...	[more]
AT4G39890.1	4.284e-15	65.57	\| Symbols: AtRABH1c, RABH1c \| RAB GTPase homolog H...	[more]
AT5G64990.2	7.308e-15	68.42	\| Symbols: RABH1a \| RAB GTPase homolog H1A \| chr5:...	[more]
AT5G64990.1	7.308e-15	68.42	\| Symbols: AtRABH1a, RABH1a \| RAB GTPase homolog H...	[more]

InterPro

Analysis Name: InterProScan analysis for Vaccinium corymbosum unigene v1
Date Performed: 2011-01-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR013753	Ras	PFAM	PF00071	Ras	coord: 2..36 score: 5.1
None	No IPR available	GENE3D	3.40.50.300	no description	coord: 2..73 score: 4.9
None	No IPR available	SEG	seg	seg	coord: 64..70 score
None	No IPR available	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 2..74 score: 2.1

Properties


Property Name	Value
Singlet in analysis	Vaccinium corymbosum unigene v1

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>CF811308 ID=CF811308; Name=CF811308; organism=Vaccinium corymbosum; type=EST; length=487bp
CAATAGAGGAAGCTGAAGCCAAAGCTCGTGACATGAATGTTATGTTCATA
GAAACCAGCGCAAAGGCTGGCTTTAACATAAAGGCCTTATTTCGGAAGAT
TGCTGCAGCCCTGCCGGGAATGGAAACACTGTCTTCAACAAAGCAAGAAG
ACATGGTTGATGTCAATCTCAAAGCTAGCAATCCTAATGCATCTCAGTCA
CAACAACAGTCCGGAGGATGTGCTTGTTGAGGATTGCTGTGTCATTATCT
GTAAAGCTCTTCTCGTTATAAAATTAAAATTTTGGGTTTCGTTGCTTTTT
TGAGGTTTAACTTAAAACAGGTGGTTATCTTTATACTCGAACCAGTCTAA
ACCCTTGTTATGTGTTATTCGTGTGGTACGATTAGGGAGAATGAGTGAAT
GACTATTATTTTGTCTGGGTTTATGTTAGGCACTCGTTCGGATTCCATTC
AGTTTTATTAGTGAAATTTTCGCGTTCAATTTGTCAN

Annotated Terms

The following terms have been associated with this EST:

Vocabulary: **INTERPRO**
Term	Definition
IPR013753	Ras
noIPR	unintegrated