CV090343

EST Overview
NameCV090343
Unique NameCV090343
TypeEST
OrganismVaccinium corymbosum (northern highbush blueberry)
Sequence length470
Libraries
Library NameType
LIBEST_014530 cDNA cold acclimated Bluecrop librarycdna_library
Unigenes
This EST is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Vaccinium corymbosum unigene v1EST
Homology
BLAST of CV090343 vs. Populus trichocarpa peptide v2.0
Match: POPTR_0012s13180.1 ()

HSP 1 Score: 53.9138 bits (128), Expect = 5.314e-8
Identity = 41/106 (38.68%), Postives = 62/106 (58.49%), Query Frame = 1
Query:    1 ENQKPVGIVTESEEVRERLGSDGDPNR-EMTETESKIAGNVSSPGKGGMVESVKDTVTSWFSGGGDQKQASEASP---GNTHGEEATTGYENG--VGERRLQESGN 300
            +N +P+G VT+SEEV +RLGS  + N  E+T++ S     V  P K G+V+ +K  V S F    ++ +AS+  P    N   E   + Y +G  +GE+RLQE+GN
Sbjct:  482 KNGRPMGKVTDSEEVEKRLGSGEEENSDEITDSVS-----VHIPAK-GVVDKLKGAVGSLFV-KSEESRASQQHPLSSSNAGAEGFPSTYASGEEIGEKRLQETGN 580          
BLAST of CV090343 vs. TrEMBL
Match: D7MFZ4|D7MFZ4_ARALY (Putative uncharacterized protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_492269 PE=4 SV=1)

HSP 1 Score: 58.151 bits (139), Expect = 3.230e-7
Identity = 40/110 (36.36%), Postives = 55/110 (50.00%), Query Frame = 1
Query:   19 GIVTESEEVRERLGSDGDPNREMTETESKIAGNVSSPGKGGMVESVKDTVTSWFSGG------------GDQKQASEASPGNTHGEEATTGYENGVG-----ERRLQESG 297
            GIVT+SEEV +RLG   DP+   +E  +K     +  G+GGM E ++  VTSW +G              D  Q+  ++ GN  G   + G E G G     +RR QESG
Sbjct:  490 GIVTQSEEVEKRLGRFKDPS---SEAATKHGEEYAEEGEGGMAEKLRGAVTSWLAGTTEEVTQKSTESVQDSTQSLGSTVGNKMGISGSGGEEAGNGGSVPLQRRFQESG 596          
BLAST of CV090343 vs. TrEMBL
Match: Q9SWB3|Q9SWB3_SOYBN (Seed maturation protein PM39 (Fragment) OS=Glycine max GN=PM39 PE=2 SV=1)

HSP 1 Score: 57.7658 bits (138), Expect = 4.218e-7
Identity = 41/101 (40.59%), Postives = 55/101 (54.46%), Query Frame = 1
Query:    1 ENQKPVGIVTESEEVRERLGSDGDPNREMTETESKIAG-NVSSPGKGGMVESVKDTVTSWFSGGGDQKQASEASPGNTHGEEATTGYENGVGERRLQESGN 300
            E+QK +G VTESEEV+ RLG       E  ETE K     V+SPG  G+V+ +   V +WF+    + Q+S+ S  N     A   ++   G RRLQES N
Sbjct:  349 EHQKILGKVTESEEVKRRLGG------EDVETEKKYQEMYVNSPGT-GVVDKLTGMVGTWFTNPA-ENQSSQDSSMNHEASRAEVEHQGAAGARRLQESPN 441          
BLAST of CV090343 vs. TAIR peptide
Match: AT4G25580.1 (| Symbols: | CAP160 protein | chr4:13056320-13058657 FORWARD LENGTH=626)

HSP 1 Score: 54.299 bits (129), Expect = 3.602e-8
Identity = 35/111 (31.53%), Postives = 59/111 (53.15%), Query Frame = 1
Query:   19 GIVTESEEVRERLGSDGDPNREMTETESKIAGNVSSPGKGGMVESVKDTVTSWFSGGGDQ--KQASEASPGNTHGEEATTGYENGVG---------------ERRLQESGN 300
            GIVT+SEEV +RLG   DP+   +E  +K     +  G+GG+ E ++  VTSW +G  ++  ++++E+   +T    +T G + G+                ++R QESGN
Sbjct:  519 GIVTQSEEVEKRLGGFKDPS---SEAATKQGEAYAEKGEGGIAEKLRGAVTSWIAGTTEEVTQKSTESVQDSTQSLGSTIGNKMGITGSGGGEAGQQGSMPLQKRFQESGN 626          
The following BLAST results are available for this feature:
BLAST of CV090343 vs. Populus trichocarpa peptide v2.0
Analysis Date: 2011-01-18 (BLAST: Vaccinium corymbosum unigene v1 vs Populus trichocarpa v2.0 peptide)
Total hits: 1
Match NameE-valueIdentityDescription
POPTR_0012s13180.15.314e-838.68[more]
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BLAST of CV090343 vs. TrEMBL
Analysis Date: 2011-01-18 (BLAST: Vaccinium corymbosum unigene v1 vs TrEMBL)
Total hits: 2
Match NameE-valueIdentityDescription
D7MFZ4|D7MFZ4_ARALY3.230e-736.36Putative uncharacterized protein OS=Arabidopsis ly... [more]
Q9SWB3|Q9SWB3_SOYBN4.218e-740.59Seed maturation protein PM39 (Fragment) OS=Glycine... [more]
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BLAST of CV090343 vs. TAIR peptide
Analysis Date: 2011-02-10 (BLAST: Vaccinium corymbosum unigene v1 vs TAIR 10 peptide)
Total hits: 1
Match NameE-valueIdentityDescription
AT4G25580.13.602e-831.53| Symbols: | CAP160 protein | chr4:13056320-13058... [more]
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InterPro
Analysis Name: InterProScan analysis for Vaccinium corymbosum unigene v1
Date Performed: 2011-01-18
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSEGsegsegcoord: 26..37
score
NoneNo IPR availableSEGsegsegcoord: 7..20
score

Properties
Property NameValue
Singlet in analysisVaccinium corymbosum unigene v1
Sequences
The following sequences are available for this feature:

EST sequence

>CV090343 ID=CV090343; Name=CV090343; organism=Vaccinium corymbosum; type=EST; length=470bp
GAGAATCAGAAGCCGGTGGGGATAGTGACCGAGTCGGAGGAAGTGAGGGA
GCGATTGGGAAGCGACGGGGATCCGAATAGGGAGATGACGGAAACTGAAT
CTAAGATTGCTGGTAATGTGAGTTCTCCTGGGAAAGGTGGTATGGTGGAA
AGTGTTAAGGATACGGTTACTTCATGGTTTTCAGGGGGTGGAGACCAAAA
GCAAGCTTCTGAAGCATCACCTGGAAACACACATGGGGAAGAAGCAACAA
CCGGTTACGAAAATGGTGTAGGAGAGCGAAGACTCCAGGAATCAGGCAAC
TGATTTTAAGCCAAGCCAAGCTCTTAAAAATGTTTCCTTTTTTGTGTATT
TATTTTCTGTGTTGTATGTCTGGTGCATTTGGTAATAATGTTGTACAAGT
GAATTGTCATTTTGGTGTGTTGCTGTATAATTATGACCTTCGAAAATAAT
ATTGATTTCCATTTGCTTTT
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Annotated Terms
The following terms have been associated with this EST:
Vocabulary: INTERPRO
TermDefinition
noIPRunintegrated