CV090343
EST Overview
Libraries
Unigenes
This EST is part of the following unigenes:
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CV090343 vs. Populus trichocarpa peptide v2.0
Match: POPTR_0012s13180.1 () HSP 1 Score: 53.9138 bits (128), Expect = 5.314e-8 Identity = 41/106 (38.68%), Postives = 62/106 (58.49%), Query Frame = 1 Query: 1 ENQKPVGIVTESEEVRERLGSDGDPNR-EMTETESKIAGNVSSPGKGGMVESVKDTVTSWFSGGGDQKQASEASP---GNTHGEEATTGYENG--VGERRLQESGN 300 +N +P+G VT+SEEV +RLGS + N E+T++ S V P K G+V+ +K V S F ++ +AS+ P N E + Y +G +GE+RLQE+GN Sbjct: 482 KNGRPMGKVTDSEEVEKRLGSGEEENSDEITDSVS-----VHIPAK-GVVDKLKGAVGSLFV-KSEESRASQQHPLSSSNAGAEGFPSTYASGEEIGEKRLQETGN 580
BLAST of CV090343 vs. TrEMBL
Match: D7MFZ4|D7MFZ4_ARALY (Putative uncharacterized protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_492269 PE=4 SV=1) HSP 1 Score: 58.151 bits (139), Expect = 3.230e-7 Identity = 40/110 (36.36%), Postives = 55/110 (50.00%), Query Frame = 1 Query: 19 GIVTESEEVRERLGSDGDPNREMTETESKIAGNVSSPGKGGMVESVKDTVTSWFSGG------------GDQKQASEASPGNTHGEEATTGYENGVG-----ERRLQESG 297 GIVT+SEEV +RLG DP+ +E +K + G+GGM E ++ VTSW +G D Q+ ++ GN G + G E G G +RR QESG Sbjct: 490 GIVTQSEEVEKRLGRFKDPS---SEAATKHGEEYAEEGEGGMAEKLRGAVTSWLAGTTEEVTQKSTESVQDSTQSLGSTVGNKMGISGSGGEEAGNGGSVPLQRRFQESG 596
BLAST of CV090343 vs. TrEMBL
Match: Q9SWB3|Q9SWB3_SOYBN (Seed maturation protein PM39 (Fragment) OS=Glycine max GN=PM39 PE=2 SV=1) HSP 1 Score: 57.7658 bits (138), Expect = 4.218e-7 Identity = 41/101 (40.59%), Postives = 55/101 (54.46%), Query Frame = 1 Query: 1 ENQKPVGIVTESEEVRERLGSDGDPNREMTETESKIAG-NVSSPGKGGMVESVKDTVTSWFSGGGDQKQASEASPGNTHGEEATTGYENGVGERRLQESGN 300 E+QK +G VTESEEV+ RLG E ETE K V+SPG G+V+ + V +WF+ + Q+S+ S N A ++ G RRLQES N Sbjct: 349 EHQKILGKVTESEEVKRRLGG------EDVETEKKYQEMYVNSPGT-GVVDKLTGMVGTWFTNPA-ENQSSQDSSMNHEASRAEVEHQGAAGARRLQESPN 441
BLAST of CV090343 vs. TAIR peptide
Match: AT4G25580.1 (| Symbols: | CAP160 protein | chr4:13056320-13058657 FORWARD LENGTH=626) HSP 1 Score: 54.299 bits (129), Expect = 3.602e-8 Identity = 35/111 (31.53%), Postives = 59/111 (53.15%), Query Frame = 1 Query: 19 GIVTESEEVRERLGSDGDPNREMTETESKIAGNVSSPGKGGMVESVKDTVTSWFSGGGDQ--KQASEASPGNTHGEEATTGYENGVG---------------ERRLQESGN 300 GIVT+SEEV +RLG DP+ +E +K + G+GG+ E ++ VTSW +G ++ ++++E+ +T +T G + G+ ++R QESGN Sbjct: 519 GIVTQSEEVEKRLGGFKDPS---SEAATKQGEAYAEKGEGGIAEKLRGAVTSWIAGTTEEVTQKSTESVQDSTQSLGSTIGNKMGITGSGGGEAGQQGSMPLQKRFQESGN 626 The following BLAST results are available for this feature:
BLAST of CV090343 vs. Populus trichocarpa peptide v2.0
Analysis Date: 2011-01-18 (BLAST: Vaccinium corymbosum unigene v1 vs Populus trichocarpa v2.0 peptide) Total hits: 1
BLAST of CV090343 vs. TrEMBL
Analysis Date: 2011-01-18 (BLAST: Vaccinium corymbosum unigene v1 vs TrEMBL) Total hits: 2
BLAST of CV090343 vs. TAIR peptide
Analysis Date: 2011-02-10 (BLAST: Vaccinium corymbosum unigene v1 vs TAIR 10 peptide) Total hits: 1
InterPro
Analysis Name: InterProScan analysis for Vaccinium corymbosum unigene v1
Date Performed: 2011-01-18
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CV090343 ID=CV090343; Name=CV090343; organism=Vaccinium corymbosum; type=EST; length=470bpback to top Annotated Terms
The
following terms have been associated with
this EST:
|