CV090471
EST Overview
Libraries
Unigenes
This EST is part of the following unigenes:
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CV090471 vs. Populus trichocarpa peptide v2.0
Match: POPTR_0018s10030.1 () HSP 1 Score: 60.4622 bits (145), Expect = 1.455e-9 Identity = 37/106 (34.91%), Postives = 58/106 (54.72%), Query Frame = -2 Query: 422 LTNLEH--LIVRIFDDESLLGLTSLLEAAPSLRKFTLELRPYXXXXXXXXXXXXXXXXXXXXXXPHQCLKDVEMLGFVGGASDLEIVMYLLQNTINLEKIVIDPHE 733 L NL+ L + +FD+E LL SL+EA+PSL + +L+LRP HQ LK VE++GF DLE+ + L++ ++L+K++IDP + Sbjct: 191 LNNLKQMQLTLDVFDEEGLLYSRSLIEASPSLHRLSLQLRP------RPKEMFGEMTWRSIGGQKHQSLKVVEIVGFTDLTCDLELALDLVKYAMSLQKLIIDPRQ 290
BLAST of CV090471 vs. Populus trichocarpa peptide v2.0
Match: POPTR_0004s23350.1 () HSP 1 Score: 53.9138 bits (128), Expect = 1.362e-7 Identity = 37/109 (33.94%), Postives = 57/109 (52.29%), Query Frame = -2 Query: 431 IQVPQLTNLEHL--IVRIFD-DESLLGLTSLLEAAPSLRKFTLELRPYXXXXXXXXXXXXXXXXXXXXXXPHQCLKDVEMLGFVGGASDLEIVMYLLQNTINLEKIVID 748 ++VP LTNL+ L I + D D + L +TSL+EAA L++F ++ PHQ LK VE+L F G A +E+ +Y+++N + LE I+ D Sbjct: 5 LEVPVLTNLKQLKFIADVIDRDPTFLAITSLIEAASFLQRFIFQV----------LVLKLLTFGEENKRCPHQHLKVVEILEFTGEAVKVELALYIIENAVVLENIIFD 103
BLAST of CV090471 vs. TrEMBL
Match: B9RAY0|B9RAY0_RICCO (Ubiquitin-protein ligase, putative OS=Ricinus communis GN=RCOM_1509630 PE=4 SV=1) HSP 1 Score: 63.5438 bits (153), Expect = 2.350e-8 Identity = 40/107 (37.38%), Postives = 58/107 (54.21%), Query Frame = -2 Query: 422 PQLTNLEHLIVRI-FDDESLLGLTSLLEAAPSLRKFTLELRPYXXXXXXXXXXXXXXXXXXXXXXPHQCLKDVEMLGFVGGASDLEIVMYLLQNTINLEKIVIDPHE 739 P+LTNL HL + +D S+L + L++++P L KFTLEL PHQ LK VE++GF+GGA + E +M+ L N LEKI++ P + Sbjct: 323 PELTNLRHLGFKTEYDICSILAVRLLIKSSPLLNKFTLELAD-------GSRCQIKRRVRTGINCPHQNLKVVEIVGFIGGAVEYEFIMFFLDNASALEKIILRPRD 422
BLAST of CV090471 vs. TrEMBL
Match: B9ILZ1|B9ILZ1_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_779433 PE=4 SV=1) HSP 1 Score: 60.4622 bits (145), Expect = 1.989e-7 Identity = 37/106 (34.91%), Postives = 58/106 (54.72%), Query Frame = -2 Query: 422 LTNLEH--LIVRIFDDESLLGLTSLLEAAPSLRKFTLELRPYXXXXXXXXXXXXXXXXXXXXXXPHQCLKDVEMLGFVGGASDLEIVMYLLQNTINLEKIVIDPHE 733 L NL+ L + +FD+E LL SL+EA+PSL + +L+LRP HQ LK VE++GF DLE+ + L++ ++L+K++IDP + Sbjct: 191 LNNLKQMQLTLDVFDEEGLLYSRSLIEASPSLHRLSLQLRP------RPKEMFGEMTWRSIGGQKHQSLKVVEIVGFTDLTCDLELALDLVKYAMSLQKLIIDPRQ 290 The following BLAST results are available for this feature:
BLAST of CV090471 vs. Populus trichocarpa peptide v2.0
Analysis Date: 2011-01-18 (BLAST: Vaccinium corymbosum unigene v1 vs Populus trichocarpa v2.0 peptide) Total hits: 2
BLAST of CV090471 vs. TrEMBL
Analysis Date: 2011-01-18 (BLAST: Vaccinium corymbosum unigene v1 vs TrEMBL) Total hits: 2
InterPro
Analysis Name: InterProScan analysis for Vaccinium corymbosum unigene v1
Date Performed: 2011-01-18
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CV090471 ID=CV090471; Name=CV090471; organism=Vaccinium corymbosum; type=EST; length=794bpback to top |