CV090624

EST Overview
NameCV090624
Unique NameCV090624
TypeEST
OrganismVaccinium corymbosum (northern highbush blueberry)
Sequence length208
Libraries
Library NameType
LIBEST_014530 cDNA cold acclimated Bluecrop librarycdna_library
Unigenes
This EST is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Vaccinium corymbosum unigene v1EST
Homology
BLAST of CV090624 vs. P. persica 1.0 peptide
Match: ppa023055m ()

HSP 1 Score: 78.1814 bits (191), Expect = 9.421e-16
Identity = 35/68 (51.47%), Postives = 50/68 (73.53%), Query Frame = 2
Query:    8 VSPLVCGLAGSIWLRFVACSRVFDDGWAEECIRESESQKEG-MSDDFKPRAKYKXEPRN*HGQRKLMI 208
            V+PL+CGL+GSIWLRF+A +RVF D W +    ++E +++G   +DFKPR+KY+ EP    GQR +MI
Sbjct:  145 VNPLICGLSGSIWLRFLAWTRVFQDDWGDRTFDDAEIRQQGEPPEDFKPRSKYRDEPHTRFGQRAVMI 212          
BLAST of CV090624 vs. TrEMBL
Match: D7TN84|D7TN84_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_26.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00019982001 PE=4 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 3.065e-18
Identity = 42/66 (63.64%), Postives = 54/66 (81.82%), Query Frame = 2
Query:   11 SPLVCGLAGSIWLRFVACSRVFDDGWAEECIRESESQKEGMSDDFKPRAKYKXEPRN*HGQRKLMI 208
            SPL+CG+AG+IWLRFVA +RVFDD WA++ I++SE QK G S+D KPRAKY  EP N +GQR ++I
Sbjct:  129 SPLICGVAGTIWLRFVATTRVFDDEWADKVIQDSEMQKPGESEDLKPRAKYSAEPHNIYGQRAVII 194          
BLAST of CV090624 vs. TrEMBL
Match: A5ACR3|A5ACR3_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_027088 PE=4 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 8.916e-18
Identity = 41/66 (62.12%), Postives = 53/66 (80.30%), Query Frame = 2
Query:   11 SPLVCGLAGSIWLRFVACSRVFDDGWAEECIRESESQKEGMSDDFKPRAKYKXEPRN*HGQRKLMI 208
            SPL+CG+AG+IWLRFVA +RVFDD WA++ I++SE QK G S+D KPR KY  EP N +GQR ++I
Sbjct:  162 SPLICGVAGTIWLRFVATTRVFDDEWADKVIQDSEMQKPGESEDLKPRTKYSAEPHNIYGQRAVII 227          
BLAST of CV090624 vs. TrEMBL
Match: B9S8W3|B9S8W3_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0836380 PE=4 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 2.428e-15
Identity = 35/67 (52.24%), Postives = 52/67 (77.61%), Query Frame = 2
Query:    8 VSPLVCGLAGSIWLRFVACSRVFDDGWAEECIRESESQKEGMSDDFKPRAKYKXEPRN*HGQRKLMI 208
            VSPL+CG+AG++WLRF+  + VF D WA++ I ESESQ +G  +D+KPR+ ++ EP N +GQR +M+
Sbjct:  175 VSPLICGVAGNVWLRFLVATGVFKDNWADDVILESESQVQGEPEDWKPRSSHRNEPHNAYGQRAVMV 241          
BLAST of CV090624 vs. TrEMBL
Match: D7LQC1|D7LQC1_ARALY (Predicted protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_664187 PE=4 SV=1)

HSP 1 Score: 61.2326 bits (147), Expect = 3.755e-8
Identity = 34/68 (50.00%), Postives = 43/68 (63.24%), Query Frame = 2
Query:    8 VSPLVCGLAGSIWLRFVACSRVFDDGWAEECIRESESQKE-GMSDDFKPRAKYKXEPRN*HGQRKLMI 208
            V+PL+ GL G I LR+VA S V+DD WA++ IR+SE Q E G   D K     K EPRN  G+R + I
Sbjct:  157 VTPLIIGLVGPISLRYVALSGVYDDDWADKAIRDSELQSEDGEVKDAKRPKTQKAEPRNLDGKRAVTI 224          
BLAST of CV090624 vs. TrEMBL
Match: Q94GD0|Q94GD0_SOLDE (Putative uncharacterized protein OS=Solanum demissum GN=SDM1_2t00007 PE=4 SV=2)

HSP 1 Score: 59.3066 bits (142), Expect = 1.427e-7
Identity = 29/67 (43.28%), Postives = 40/67 (59.70%), Query Frame = 2
Query:    8 VSPLVCGLAGSIWLRFVACSRVFDDGWAEECIRESESQKEGMSDDFKPRAKYKXEPRN*HGQRKLMI 208
            VSPL+ GLAG IWLR +A   V  D WA++ + ESE+Q +G  +  +     K EP N  G+R + I
Sbjct:  126 VSPLIVGLAGPIWLRLLAHENVLSDEWADDVVHESETQTQGEIELSQSTGSQKTEPHNLLGKRAVTI 192          
BLAST of CV090624 vs. TrEMBL
Match: A9RRQ8|A9RRQ8_PHYPA (Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_205034 PE=4 SV=1)

HSP 1 Score: 58.151 bits (139), Expect = 3.179e-7
Identity = 28/66 (42.42%), Postives = 44/66 (66.67%), Query Frame = 2
Query:    5 GVSPLVCGLAGSIWLRFVACSRVFDDGWAEECIRESESQKEGMSDDFKPRAKYK--XEPRN*HGQR 196
            GV+PLVCG+ G +W++FV  + V++ GWAEE +  +E+Q E  + + KPR K +   EP   +G+R
Sbjct:   15 GVTPLVCGILGPVWMKFVRSTCVYEKGWAEEALLVAEAQHE--NKEVKPRRKKRVVGEPWTTYGER 78          
BLAST of CV090624 vs. TrEMBL
Match: Q5XVF0|Q5XVF0_ARATH (Putative uncharacterized protein OS=Arabidopsis thaliana GN=At2g02955 PE=2 SV=1)

HSP 1 Score: 57.3806 bits (137), Expect = 5.422e-7
Identity = 32/68 (47.06%), Postives = 41/68 (60.29%), Query Frame = 2
Query:    8 VSPLVCGLAGSIWLRFVACSRVFDDGWAEECIRESESQKE-GMSDDFKPRAKYKXEPRN*HGQRKLMI 208
            V+PL+ GL G I LR+VA S V+   WA   IR+SE Q E G   D K   ++K EPRN  G+R + I
Sbjct:  156 VTPLIIGLVGPISLRYVALSGVYHKDWANNAIRDSEHQSEDGEVKDAKRLKRHKAEPRNIDGKRAVTI 223          
BLAST of CV090624 vs. TrEMBL
Match: Q5XVE9|Q5XVE9_ARATH (Putative uncharacterized protein OS=Arabidopsis thaliana PE=2 SV=1)

HSP 1 Score: 57.3806 bits (137), Expect = 5.422e-7
Identity = 32/68 (47.06%), Postives = 41/68 (60.29%), Query Frame = 2
Query:    8 VSPLVCGLAGSIWLRFVACSRVFDDGWAEECIRESESQKE-GMSDDFKPRAKYKXEPRN*HGQRKLMI 208
            V+PL+ GL G I LR+VA S V+   WA   IR+SE Q E G   D K   ++K EPRN  G+R + I
Sbjct:   16 VTPLIIGLVGPISLRYVALSGVYHKDWANNAIRDSEHQSEDGEVKDAKRLKRHKAEPRNIDGKRAVTI 83          
BLAST of CV090624 vs. TrEMBL
Match: Q5XVE8|Q5XVE8_ARATH (Putative uncharacterized protein OS=Arabidopsis thaliana PE=2 SV=1)

HSP 1 Score: 57.3806 bits (137), Expect = 5.422e-7
Identity = 32/68 (47.06%), Postives = 41/68 (60.29%), Query Frame = 2
Query:    8 VSPLVCGLAGSIWLRFVACSRVFDDGWAEECIRESESQKE-GMSDDFKPRAKYKXEPRN*HGQRKLMI 208
            V+PL+ GL G I LR+VA S V+   WA   IR+SE Q E G   D K   ++K EPRN  G+R + I
Sbjct:  156 VTPLIIGLVGPISLRYVALSGVYHKDWANNAIRDSEHQSEDGEVKDAKRLKRHKAEPRNIDGKRAVTI 223          
BLAST of CV090624 vs. Vitis vinifera peptide
Match: GSVIVT01019982001 (assembled CDS)

HSP 1 Score: 94.7449 bits (234), Expect = 8.322e-21
Identity = 42/66 (63.64%), Postives = 54/66 (81.82%), Query Frame = 2
Query:   11 SPLVCGLAGSIWLRFVACSRVFDDGWAEECIRESESQKEGMSDDFKPRAKYKXEPRN*HGQRKLMI 208
            SPL+CG+AG+IWLRFVA +RVFDD WA++ I++SE QK G S+D KPRAKY  EP N +GQR ++I
Sbjct:  129 SPLICGVAGTIWLRFVATTRVFDDEWADKVIQDSEMQKPGESEDLKPRAKYSAEPHNIYGQRAVII 194          
BLAST of CV090624 vs. TAIR peptide
Match: AT2G02955.1 (| Symbols: MEE12 | maternal effect embryo arrest 12 | chr2:859592-861772 FORWARD LENGTH=666)

HSP 1 Score: 57.3806 bits (137), Expect = 2.161e-9
Identity = 32/68 (47.06%), Postives = 41/68 (60.29%), Query Frame = 2
Query:    8 VSPLVCGLAGSIWLRFVACSRVFDDGWAEECIRESESQKE-GMSDDFKPRAKYKXEPRN*HGQRKLMI 208
            V+PL+ GL G I LR+VA S V+   WA   IR+SE Q E G   D K   ++K EPRN  G+R + I
Sbjct:  156 VTPLIIGLVGPISLRYVALSGVYHKDWANNAIRDSEHQSEDGEVKDAKRLKRHKAEPRNIDGKRAVTI 223          
The following BLAST results are available for this feature:
BLAST of CV090624 vs. P. persica 1.0 peptide
Analysis Date: 2011-01-18 (BLAST: Vaccinium corymbosum unigene v1 vs Ppersica v1.0 peptide)
Total hits: 1
Match NameE-valueIdentityDescription
ppa023055m9.421e-1651.47[more]
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BLAST of CV090624 vs. TrEMBL
Analysis Date: 2011-01-18 (BLAST: Vaccinium corymbosum unigene v1 vs TrEMBL)
Total hits: 9
Match NameE-valueIdentityDescription
D7TN84|D7TN84_VITVI3.065e-1863.64Whole genome shotgun sequence of line PN40024, sca... [more]
A5ACR3|A5ACR3_VITVI8.916e-1862.12Putative uncharacterized protein OS=Vitis vinifera... [more]
B9S8W3|B9S8W3_RICCO2.428e-1552.24Putative uncharacterized protein OS=Ricinus commun... [more]
D7LQC1|D7LQC1_ARALY3.755e-850.00Predicted protein OS=Arabidopsis lyrata subsp. lyr... [more]
Q94GD0|Q94GD0_SOLDE1.427e-743.28Putative uncharacterized protein OS=Solanum demiss... [more]
A9RRQ8|A9RRQ8_PHYPA3.179e-742.42Predicted protein OS=Physcomitrella patens subsp. ... [more]
Q5XVF0|Q5XVF0_ARATH5.422e-747.06Putative uncharacterized protein OS=Arabidopsis th... [more]
Q5XVE9|Q5XVE9_ARATH5.422e-747.06Putative uncharacterized protein OS=Arabidopsis th... [more]
Q5XVE8|Q5XVE8_ARATH5.422e-747.06Putative uncharacterized protein OS=Arabidopsis th... [more]
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BLAST of CV090624 vs. Vitis vinifera peptide
Analysis Date: 2011-01-25 (BLAST: Vaccinium corymbosum unigene v1 vs Vitis vinifera peptide)
Total hits: 1
Match NameE-valueIdentityDescription
GSVIVT010199820018.322e-2163.64assembled CDS[more]
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BLAST of CV090624 vs. TAIR peptide
Analysis Date: 2011-02-10 (BLAST: Vaccinium corymbosum unigene v1 vs TAIR 10 peptide)
Total hits: 1
Match NameE-valueIdentityDescription
AT2G02955.12.161e-947.06| Symbols: MEE12 | maternal effect embryo arrest 1... [more]
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Properties
Property NameValue
Singlet in analysisVaccinium corymbosum unigene v1
Sequences
The following sequences are available for this feature:

EST sequence

>CV090624 ID=CV090624; Name=CV090624; organism=Vaccinium corymbosum; type=EST; length=208bp
GCTTGGGGTGAGCCCGTTGGTTTGTGGGCTGGCTGGGAGTATTTGGTTGC
GGTTCGTGGCGTGTTCTAGGGTTTTTGATGATGGGTGGGCTGAGGAGTGT
ATTCGGGAGTCTGAATCACAGAAAGAAGGGATGTCAGATGATTTCAAGCC
TCGTGCTAAATACAAANCAGAACCTCGCAACTGACATGGNCAAAGAAAAT
TAATGATA
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