CV090714 | GDV

EST Overview


Name	CV090714
Unique Name	CV090714
Type	EST
Organism	Vaccinium corymbosum (northern highbush blueberry)
Sequence length	742

Libraries


Library Name	Type
LIBEST_014530 cDNA cold acclimated Bluecrop library	cdna_library

Unigenes

This EST is part of the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
	Vaccinium corymbosum unigene v1	EST

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
Vaccinium corymbosum unigene v1	2011-01-18
BLAST: Vaccinium corymbosum unigene v1 vs Populus trichocarpa v2.0 peptide	2011-01-18
BLAST: Vaccinium corymbosum unigene v1 vs Ppersica v1.0 peptide	2011-01-18
BLAST: Vaccinium corymbosum unigene v1 vs TrEMBL	2011-01-18
BLAST: Vaccinium corymbosum unigene v1 vs Vitis vinifera peptide	2011-01-25
BLAST: Vaccinium corymbosum unigene v1 vs TAIR 10 peptide	2011-02-10
InterProScan analysis for Vaccinium corymbosum unigene v1	2011-01-18

Homology

[Close]

BLAST of CV090714 vs. Populus trichocarpa peptide v2.0
Match: POPTR_0019s11200.1 ()

HSP 1 Score: 162.54 bits (410), Expect = 2.423e-40
Identity = 92/193 (47.67%), Postives = 106/193 (54.92%), Query Frame = 3

Query:    3 ILPCRHKFHASCVDAWLTTWRTFCPVCKRDARTSTSDNPPASERTPXXXXXXXXXXXXXXXXXXXXXXXX-IQIGXXXXXXXXXXXX---TPYLQSYIGTYRQSPRLNASQSSVDLRNASSQRSHASHLVSPQSLGYPSVSPVNSRYISPYIHSPVGSLSHVGSSINQQHPVHXXXXXXXXXXXXXXXXLPEC 569
            ILPCRHKFHA CVD+WLTTWRTFCPVCKRDARTST + PPA+E TP                         IQI                TPY Q  + +YR SP +  SQSS DLRN SS RS AS LVSP SLGYPS+SP+N+RY+S YI SP  +   + SS  Q  P+H                LP+C
Sbjct:  142 ILPCRHKFHAFCVDSWLTTWRTFCPVCKRDARTSTGE-PPATESTPLLSSNPSSLASSSMLSSFRSGTSTAIQITPSRTPSVSYIPSLSSTPYAQQSLRSYRHSPSITLSQSSADLRNMSSLRSRASFLVSPHSLGYPSISPLNTRYMSAYIPSPSNASPSLVSSSRQPRPLHCSESAASFSPFASAHSLPDC 333

[Close]

BLAST of CV090714 vs. Populus trichocarpa peptide v2.0
Match: POPTR_0013s11590.1 ()

HSP 1 Score: 159.073 bits (401), Expect = 2.678e-39
Identity = 88/173 (50.87%), Postives = 104/173 (60.12%), Query Frame = 3

Query:    3 ILPCRHKFHASCVDAWLTTWRTFCPVCKRDARTSTSDNPPASERTP-XXXXXXXXXXXXXXXXXXXXXXXXIQIG---XXXXXXXXXXXXTPYLQSYIGTYRQSPRLNASQSSVDLRNASSQRSHASHLVSPQSLGYPSVSPVNSRYISPYIHSPVGSLSHVGSSINQQHPVH 509
            ILPCRHKFHA CVD+WLTTWRTFCPVCKRDARTST D PPASE TP                         IQI                TPY+Q  + +YR S  ++ S SS DLR+ SSQRS  SHLVSP SLGYPS+SP+N+RY+S YI SP  +   + SS +Q  P++
Sbjct:  255 ILPCRHKFHAFCVDSWLTTWRTFCPVCKRDARTSTGD-PPASESTPLLSSNPSSFASSSMLSSFRSGTSTAIQIASSRTPSVSHISSLSSTPYVQQPLRSYRHSTSISISHSSADLRHMSSQRSLTSHLVSPHSLGYPSISPLNTRYMSAYIPSPSNASPSLVSSSHQPRPLY 426

[Close]

BLAST of CV090714 vs. Populus trichocarpa peptide v2.0
Match: POPTR_0005s11320.1 ()

HSP 1 Score: 61.2326 bits (147), Expect = 7.601e-10
Identity = 21/36 (58.33%), Postives = 29/36 (80.56%), Query Frame = 3

Query:    3 ILPCRHKFHASCVDAWLTTWRTFCPVCKRDARTSTS 110
            +LPC H+FH++CVD+WLT W TFCPVCK D +  ++
Sbjct:  243 VLPCHHEFHSTCVDSWLTKWGTFCPVCKLDMKDKSA 278

[Close]

BLAST of CV090714 vs. P. persica 1.0 peptide
Match: ppa022081m ()

HSP 1 Score: 119.398 bits (298), Expect = 1.675e-27
Identity = 69/138 (50.00%), Postives = 79/138 (57.25%), Query Frame = 3

Query:    3 ILPCRHKFHASCVDAWLTTWRTFCPVCKRDARTSTSDNPPASERTP---XXXXXXXXXXXXXXXXXXXXXXXXIQI-----GXXXXXXXXXXXXTPYLQSYIGTYRQSPRLNASQSSVDLRNASSQRSHASHLVSPQS 392
            ILPCRHKFHA CVD+WLT+WRTFCPVCKRDAR +TSD PPASE TP                           +QI                  T   QS   +YRQSP ++ S+SS+DLRNASSQRSHAS+ VSP S
Sbjct:  212 ILPCRHKFHAFCVDSWLTSWRTFCPVCKRDARANTSD-PPASESTPLLSSSPSSSVASSVLSSMRSSLASSSAMQIVPALSQSPYSLSHSHASSTHIQQSLRSSYRQSPSISVSRSSLDLRNASSQRSHASYFVSPNS 348

[Close]

BLAST of CV090714 vs. P. persica 1.0 peptide
Match: ppa015768m ()

HSP 1 Score: 66.2402 bits (160), Expect = 1.683e-11
Identity = 24/33 (72.73%), Postives = 29/33 (87.88%), Query Frame = 3

Query:    3 ILPCRHKFHASCVDAWLTTWRTFCPVCKRDART 101
            +LPC+H+FH+SCVD+WLT W TFCPVCK D RT
Sbjct:  244 VLPCQHEFHSSCVDSWLTKWGTFCPVCKHDMRT 276

[Close]

BLAST of CV090714 vs. TrEMBL
Match: B9IQI2|B9IQI2_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_1108425 PE=4 SV=1)

HSP 1 Score: 162.54 bits (410), Expect = 3.248e-38
Identity = 92/193 (47.67%), Postives = 106/193 (54.92%), Query Frame = 3

Query:    3 ILPCRHKFHASCVDAWLTTWRTFCPVCKRDARTSTSDNPPASERTPXXXXXXXXXXXXXXXXXXXXXXXX-IQIGXXXXXXXXXXXX---TPYLQSYIGTYRQSPRLNASQSSVDLRNASSQRSHASHLVSPQSLGYPSVSPVNSRYISPYIHSPVGSLSHVGSSINQQHPVHXXXXXXXXXXXXXXXXLPEC 569
            ILPCRHKFHA CVD+WLTTWRTFCPVCKRDARTST + PPA+E TP                         IQI                TPY Q  + +YR SP +  SQSS DLRN SS RS AS LVSP SLGYPS+SP+N+RY+S YI SP  +   + SS  Q  P+H                LP+C
Sbjct:  246 ILPCRHKFHAFCVDSWLTTWRTFCPVCKRDARTSTGE-PPATESTPLLSSNPSSLASSSMLSSFRSGTSTAIQITPSRTPSVSYIPSLSSTPYAQQSLRSYRHSPSITLSQSSADLRNMSSLRSRASFLVSPHSLGYPSISPLNTRYMSAYIPSPSNASPSLVSSSRQPRPLHCSESAASFSPFASAHSLPDC 437

[Close]

BLAST of CV090714 vs. TrEMBL
Match: B9MW91|B9MW91_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_592251 PE=4 SV=1)

HSP 1 Score: 159.458 bits (402), Expect = 2.750e-37
Identity = 88/173 (50.87%), Postives = 104/173 (60.12%), Query Frame = 3

Query:    3 ILPCRHKFHASCVDAWLTTWRTFCPVCKRDARTSTSDNPPASERTP-XXXXXXXXXXXXXXXXXXXXXXXXIQIG---XXXXXXXXXXXXTPYLQSYIGTYRQSPRLNASQSSVDLRNASSQRSHASHLVSPQSLGYPSVSPVNSRYISPYIHSPVGSLSHVGSSINQQHPVH 509
            ILPCRHKFHA CVD+WLTTWRTFCPVCKRDARTST D PPASE TP                         IQI                TPY+Q  + +YR S  ++ S SS DLR+ SSQRS  SHLVSP SLGYPS+SP+N+RY+S YI SP  +   + SS +Q  P++
Sbjct:   83 ILPCRHKFHAFCVDSWLTTWRTFCPVCKRDARTSTGD-PPASESTPLLSSNPSSFASSSMLSSFRSGTSTAIQIASSRTPSVSHISSLSSTPYVQQTLRSYRHSTSISISHSSADLRHMSSQRSLTSHLVSPHSLGYPSISPLNTRYMSAYIPSPSNASPSLVSSSHQPRPLY 254

[Close]

BLAST of CV090714 vs. TrEMBL
Match: B9NF93|B9NF93_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_1120040 PE=4 SV=1)

HSP 1 Score: 159.073 bits (401), Expect = 3.592e-37
Identity = 88/173 (50.87%), Postives = 104/173 (60.12%), Query Frame = 3

Query:    3 ILPCRHKFHASCVDAWLTTWRTFCPVCKRDARTSTSDNPPASERTP-XXXXXXXXXXXXXXXXXXXXXXXXIQIG---XXXXXXXXXXXXTPYLQSYIGTYRQSPRLNASQSSVDLRNASSQRSHASHLVSPQSLGYPSVSPVNSRYISPYIHSPVGSLSHVGSSINQQHPVH 509
            ILPCRHKFHA CVD+WLTTWRTFCPVCKRDARTST D PPASE TP                         IQI                TPY+Q  + +YR S  ++ S SS DLR+ SSQRS  SHLVSP SLGYPS+SP+N+RY+S YI SP  +   + SS +Q  P++
Sbjct:  255 ILPCRHKFHAFCVDSWLTTWRTFCPVCKRDARTSTGD-PPASESTPLLSSNPSSFASSSMLSSFRSGTSTAIQIASSRTPSVSHISSLSSTPYVQQPLRSYRHSTSISISHSSADLRHMSSQRSLTSHLVSPHSLGYPSISPLNTRYMSAYIPSPSNASPSLVSSSHQPRPLY 426

[Close]

BLAST of CV090714 vs. TrEMBL
Match: D7SRI8|D7SRI8_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_75.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00034782001 PE=4 SV=1)

HSP 1 Score: 145.976 bits (367), Expect = 3.146e-33
Identity = 89/198 (44.95%), Postives = 105/198 (53.03%), Query Frame = 3

Query:    3 ILPCRHKFHASCVDAWLTTWRTFCPVCKRDARTSTSDNPPASERTPXXXXXXXXXXXXXXXXXXXXXXXXIQIGXXXXXXXXXXXXTPYLQSYIGTYRQSPRLNASQSSVDLRNASSQRSHASHLVSPQSLGYPSVSPVNSRYISPYIHSPV-GSLSHVGSSINQQHPVHXXXXXXXXXXXXXXXXLPEC*FKLDYVE 593
            ILPCRHKFHA CVD+WLT+WRTFCPVCKRDARTST D  P SE TP                                        +P     +   R +   + S +    +NASSQRSHAS+LVSP S+GYPS+SP+NSRY+SPYI SP   SLS+VGSS    HP+H                LPE  F LDY +
Sbjct:  234 ILPCRHKFHAFCVDSWLTSWRTFCPVCKRDARTSTGD--PPSESTPLLSSSPGSLAPSSLVSSVR--------SSLASSSAIHIAPSPSPSHSLSVSRNN---SLSATPYIQQNASSQRSHASYLVSPHSMGYPSLSPLNSRYLSPYIPSPSNASLSYVGSSSRPPHPLHYSESATSFSPYTSAQSLPE--FILDYAD 416

[Close]

BLAST of CV090714 vs. TrEMBL
Match: Q9M621|Q9M621_ARATH (ReMembR-H2 protein JR702 (Fragment) OS=Arabidopsis thaliana PE=2 SV=1)

HSP 1 Score: 136.346 bits (342), Expect = 2.493e-30
Identity = 83/203 (40.89%), Postives = 104/203 (51.23%), Query Frame = 3

Query:    3 ILPCRHKFHASCVDAWLTTWRTFCPVCKRDARTSTSDNPPASERTPXXXXXXXXXXXXXXXXXXXXXXXXIQIGXXXXXXXXXXXXTPYLQSYI------GTYRQSPRLNASQSSVDLRN-------ASSQRSHASHLVSPQSLGYPSVSPVNSRYISPYIHSPV-GSLSHVGSSINQQHPVHXXXXXXXXXXXXXXXXLPEC 569
            +LPC HKFHA+CVD+WLT+WRTFCPVCKRDARTST + PPASE TP                        I                    SYI       + R+SP ++ S+SSVDLR        + SQRS+ SH+ SPQSLGYP++SP N+RY+SPY  SP   S +  GSS    +P+                 LP+C
Sbjct:  243 LLPCCHKFHAACVDSWLTSWRTFCPVCKRDARTSTGE-PPASESTPLLSSAASSFTSSSLHSSVRSSALLIGPSLGSLPTSISFSPAYASSSYIRQSFQSSSNRRSPPISVSRSSVDLRQQAASPSPSPSQRSYISHMASPQSLGYPTISPFNTRYMSPYRPSPSNASPAMAGSSNYPLNPLRYSESAGTFSPYASANSLPDC 444

[Close]

BLAST of CV090714 vs. TrEMBL
Match: Q9C8W4|Q9C8W4_ARATH (Putative uncharacterized protein F17M19.13 OS=Arabidopsis thaliana GN=F17M19.13 PE=4 SV=1)

HSP 1 Score: 136.346 bits (342), Expect = 2.493e-30
Identity = 83/203 (40.89%), Postives = 104/203 (51.23%), Query Frame = 3

Query:    3 ILPCRHKFHASCVDAWLTTWRTFCPVCKRDARTSTSDNPPASERTPXXXXXXXXXXXXXXXXXXXXXXXXIQIGXXXXXXXXXXXXTPYLQSYI------GTYRQSPRLNASQSSVDLRN-------ASSQRSHASHLVSPQSLGYPSVSPVNSRYISPYIHSPV-GSLSHVGSSINQQHPVHXXXXXXXXXXXXXXXXLPEC 569
            +LPC HKFHA+CVD+WLT+WRTFCPVCKRDARTST + PPASE TP                        I                    SYI       + R+SP ++ S+SSVDLR        + SQRS+ SH+ SPQSLGYP++SP N+RY+SPY  SP   S +  GSS    +P+                 LP+C
Sbjct:  223 LLPCCHKFHAACVDSWLTSWRTFCPVCKRDARTSTGE-PPASESTPLLSSAASSFTSSSLHSSVRSSALLIGPSLGSLPTSISFSPAYASSSYIRQSFQSSSNRRSPPISVSRSSVDLRQQAASPSPSPSQRSYISHMASPQSLGYPTISPFNTRYMSPYRPSPSNASPAMAGSSNYPLNPLRYSESAGTFSPYASANSLPDC 424

[Close]

BLAST of CV090714 vs. TrEMBL
Match: Q8VZ14|Q8VZ14_ARATH (Putative uncharacterized protein At1g71980 OS=Arabidopsis thaliana GN=At1g71980 PE=2 SV=1)

HSP 1 Score: 136.346 bits (342), Expect = 2.493e-30
Identity = 83/203 (40.89%), Postives = 104/203 (51.23%), Query Frame = 3

Query:    3 ILPCRHKFHASCVDAWLTTWRTFCPVCKRDARTSTSDNPPASERTPXXXXXXXXXXXXXXXXXXXXXXXXIQIGXXXXXXXXXXXXTPYLQSYI------GTYRQSPRLNASQSSVDLRN-------ASSQRSHASHLVSPQSLGYPSVSPVNSRYISPYIHSPV-GSLSHVGSSINQQHPVHXXXXXXXXXXXXXXXXLPEC 569
            +LPC HKFHA+CVD+WLT+WRTFCPVCKRDARTST + PPASE TP                        I                    SYI       + R+SP ++ S+SSVDLR        + SQRS+ SH+ SPQSLGYP++SP N+RY+SPY  SP   S +  GSS    +P+                 LP+C
Sbjct:  247 LLPCCHKFHAACVDSWLTSWRTFCPVCKRDARTSTGE-PPASESTPLLSSAASSFTSSSLHSSVRSSALLIGPSLGSLPTSISFSPAYASSSYIRQSFQSSSNRRSPPISVSRSSVDLRQQAASPSPSPSQRSYISHMASPQSLGYPTISPFNTRYMSPYRPSPSNASPAMAGSSNYPLNPLRYSESAGTFSPYASANSLPDC 448

[Close]

BLAST of CV090714 vs. TrEMBL
Match: D7KZ84|D7KZ84_ARALY (Predicted protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_676731 PE=4 SV=1)

HSP 1 Score: 135.191 bits (339), Expect = 5.554e-30
Identity = 81/203 (39.90%), Postives = 103/203 (50.74%), Query Frame = 3

Query:    3 ILPCRHKFHASCVDAWLTTWRTFCPVCKRDARTSTSDNPPASERTPXXXXXXXXXXXXXXXXXXXXXXXXIQIGXXXXXXXXXXXXTPYLQSYI------GTYRQSPRLNASQSSVDLRN-------ASSQRSHASHLVSPQSLGYPSVSPVNSRYISPYIHSPVGSLSHVGSSINQQ-HPVHXXXXXXXXXXXXXXXXLPEC 569
            +LPC HKFHA+CVD+WLT+WRTFCPVCKRDART+T + PPASE TP                        I                    SYI       + R+SP ++ S+SSVDLR        + SQRS+ SH+ SPQSLGYP++SP N+RY+SPY  SP  +   V  S N   +P+                 LP+C
Sbjct:  247 LLPCCHKFHAACVDSWLTSWRTFCPVCKRDARTNTGE-PPASESTPLLSSAASSFTSSSLHSSVRSSALLIGPSMGSLPSSVSFSPAYVSSSYIRQSFQSSSNRRSPPISVSRSSVDLRQQAASPSPSPSQRSYISHMASPQSLGYPTISPFNTRYMSPYRPSPSDASPAVAGSSNYPFNPLRYSESAGTFSPYASANSLPDC 448

[Close]

BLAST of CV090714 vs. TrEMBL
Match: B9T6K7|B9T6K7_RICCO (Zinc finger protein, putative OS=Ricinus communis GN=RCOM_0261670 PE=4 SV=1)

HSP 1 Score: 108.997 bits (271), Expect = 4.262e-22
Identity = 61/124 (49.19%), Postives = 69/124 (55.65%), Query Frame = 3

Query:    3 ILPCRHKFHASCVDAWLTTWRTFCPVCKRDARTSTSDNPPASERTP-XXXXXXXXXXXXXXXXXXXXXXXXIQIG-----XXXXXXXXXXXXTPYLQSYIGTYRQSPRLNASQSSVDLRNASSQ 356
            ILPCRHKFHA CVD+WLT+WRTFCPVCKRDARTST D PPASE TP                         IQI                  TPYLQ  + +Y QSP +N ++SS DLR+ SSQ
Sbjct:  252 ILPCRHKFHALCVDSWLTSWRTFCPVCKRDARTSTGD-PPASESTPLLSSSPASMASSSVLSSFRSSSSLAIQIASGPSRSSSISHIPSLSTTPYLQQSLRSYHQSPSMNVNRSSADLRHVSSQ 374

[Close]

BLAST of CV090714 vs. TrEMBL
Match: Q8S7T8|Q8S7T8_ORYSJ (Putative integral membrane protein OS=Oryza sativa subsp. japonica GN=OSJNBa0091P11.36 PE=4 SV=1)

HSP 1 Score: 108.227 bits (269), Expect = 7.270e-22
Identity = 73/168 (43.45%), Postives = 85/168 (50.60%), Query Frame = 3

Query:    3 ILPCRHKFHASCVDAWLTTWRTFCPVCKRDARTSTSDNPPASERTPXXXXXXXXXXXXXXXXXXXXXXXXIQI----GXXXXXXXXXXXXTPYLQSYIGTYRQSPRLNASQSSVDLRNASSQRSHASHLVSPQSL-GYPSVSPVNSRYISPYI-HSPVGSLS-HVGSS 485
            +LPCRHKFHA+CVD WLTTWRTFCPVCKRDA T   D PPASE TP                          I                 TP   + I ++  S  ++ S+S+VDL N SS R  ASHL S  SL G     P+N RY SP++ HS   S S HV SS
Sbjct:  255 VLPCRHKFHAACVDLWLTTWRTFCPVCKRDASTGIPD-PPASETTPLLSSAVRLPSQSSSFRSSVAASPPRPISRRPSSQSISRIYAASGTPNSPNPIRSFTNSTAMSISRSNVDLSNMSS-RPRASHLASAHSLVGSHLSPPINIRYASPHMSHSGYASPSPHVSSS 420

[Close]

BLAST of CV090714 vs. Vitis vinifera peptide
Match: GSVIVT01034782001 (assembled CDS)

HSP 1 Score: 145.976 bits (367), Expect = 1.426e-35
Identity = 89/198 (44.95%), Postives = 105/198 (53.03%), Query Frame = 3

Query:    3 ILPCRHKFHASCVDAWLTTWRTFCPVCKRDARTSTSDNPPASERTPXXXXXXXXXXXXXXXXXXXXXXXXIQIGXXXXXXXXXXXXTPYLQSYIGTYRQSPRLNASQSSVDLRNASSQRSHASHLVSPQSLGYPSVSPVNSRYISPYIHSPV-GSLSHVGSSINQQHPVHXXXXXXXXXXXXXXXXLPEC*FKLDYVE 593
            ILPCRHKFHA CVD+WLT+WRTFCPVCKRDARTST D  P SE TP                                        +P     +   R +   + S +    +NASSQRSHAS+LVSP S+GYPS+SP+NSRY+SPYI SP   SLS+VGSS    HP+H                LPE  F LDY +
Sbjct:  234 ILPCRHKFHAFCVDSWLTSWRTFCPVCKRDARTSTGD--PPSESTPLLSSSPGSLAPSSLVSSVR--------SSLASSSAIHIAPSPSPSHSLSVSRNN---SLSATPYIQQNASSQRSHASYLVSPHSMGYPSLSPLNSRYLSPYIPSPSNASLSYVGSSSRPPHPLHYSESATSFSPYTSAQSLPE--FILDYAD 416

[Close]

BLAST of CV090714 vs. Vitis vinifera peptide
Match: GSVIVT01018761001 (assembled CDS)

HSP 1 Score: 65.855 bits (159), Expect = 1.875e-11
Identity = 26/45 (57.78%), Postives = 32/45 (71.11%), Query Frame = 3

Query:    3 ILPCRHKFHASCVDAWLTTWRTFCPVCKRDARTSTSDNPPASERT 137
            +LPC+H+FHASCVD+WLT W TFCPVCK D  T  + +     RT
Sbjct:  304 VLPCQHEFHASCVDSWLTKWGTFCPVCKYDLSTDATCSKVNERRT 348

[Close]

BLAST of CV090714 vs. TAIR peptide
Match: AT1G71980.1 (| Symbols: | Protease-associated (PA) RING/U-box zinc finger family protein | chr1:27098250-27099881 FORWARD LENGTH=448)

HSP 1 Score: 136.346 bits (342), Expect = 1.635e-32
Identity = 83/203 (40.89%), Postives = 104/203 (51.23%), Query Frame = 3

Query:    3 ILPCRHKFHASCVDAWLTTWRTFCPVCKRDARTSTSDNPPASERTPXXXXXXXXXXXXXXXXXXXXXXXXIQIGXXXXXXXXXXXXTPYLQSYI------GTYRQSPRLNASQSSVDLRN-------ASSQRSHASHLVSPQSLGYPSVSPVNSRYISPYIHSPV-GSLSHVGSSINQQHPVHXXXXXXXXXXXXXXXXLPEC 569
            +LPC HKFHA+CVD+WLT+WRTFCPVCKRDARTST + PPASE TP                        I                    SYI       + R+SP ++ S+SSVDLR        + SQRS+ SH+ SPQSLGYP++SP N+RY+SPY  SP   S +  GSS    +P+                 LP+C
Sbjct:  247 LLPCCHKFHAACVDSWLTSWRTFCPVCKRDARTSTGE-PPASESTPLLSSAASSFTSSSLHSSVRSSALLIGPSLGSLPTSISFSPAYASSSYIRQSFQSSSNRRSPPISVSRSSVDLRQQAASPSPSPSQRSYISHMASPQSLGYPTISPFNTRYMSPYRPSPSNASPAMAGSSNYPLNPLRYSESAGTFSPYASANSLPDC 448

[Close]

BLAST of CV090714 vs. TAIR peptide
Match: AT1G22670.1 (| Symbols: | Protease-associated (PA) RING/U-box zinc finger family protein | chr1:8021854-8023516 REVERSE LENGTH=422)

HSP 1 Score: 100.523 bits (249), Expect = 9.945e-22
Identity = 64/169 (37.87%), Postives = 86/169 (50.89%), Query Frame = 3

Query:    3 ILPCRHKFHASCVDAWLTTWRTFCPVCKRDARTSTSDNPPASERTPXXXXXXXXXXXXXXXXXXXXXXXXIQIGXXXXXXXXXXXXTPYLQSYIGTYRQSPRLNASQSSVDLR------NASSQRSHASHLVSPQSLGYPSVSPVNSRYISPYIHSPVGSLSHVGSSIN 491
            +LPC HKFH +CVD+WL +WRTFCPVCKRDART T+D P A+E TP                        + I                  S+I  + +S  +N S+ S +LR       +SSQRSH S + S  SLGY ++SP+N+  +SPY   P  +   + SS N
Sbjct:  247 VLPCSHKFHVACVDSWLISWRTFCPVCKRDART-TADEPLATESTP-------------FLSSSIATSSLVCIDSPPLGSSVSFSPAHVSSSFIHQFVRSSPMNGSRISENLRRQASPLQSSSQRSHLS-MKSSHSLGYSTMSPLNAMGMSPYRPYPSNASPGLFSSTN 400

[Close]

BLAST of CV090714 vs. TAIR peptide
Match: AT4G09560.1 (| Symbols: | Protease-associated (PA) RING/U-box zinc finger family protein | chr4:6041652-6043681 REVERSE LENGTH=448)

HSP 1 Score: 73.1738 bits (178), Expect = 1.700e-13
Identity = 52/145 (35.86%), Postives = 65/145 (44.83%), Query Frame = 3

Query:    3 ILPCRHKFHASCVDAWLTTWRTFCPVCKRDARTSTSDNPPASERTP---------XXXXXXXXXXXXXXXXXXXXXXXXIQIGXXXXXXXXXXXXTPYLQSYI--------GTYRQSPRLNASQSSVDLRNASSQRSHAS-HLVS 383
            ILPC HKFH +CVD WL   ++FCPVCKRDAR+ ++D PP SE TP                                 I++              P   S+         G+ R S  +  S+SS DLRNA SQRS+ S H VS
Sbjct:  249 ILPCHHKFHVACVDLWLGQRKSFCPVCKRDARSISTDKPP-SEHTPFLSRTPSMTPTSSFLLSSSSTTPLQSSHELPISIRVDPSLPSTSMQPHTVPMYLSHSRSHTSFQNGSNRFSRPIPVSRSSADLRNAVSQRSYNSPHQVS 392

[Close]

BLAST of CV090714 vs. TAIR peptide
Match: AT1G35625.1 (| Symbols: | RING/U-box superfamily protein | chr1:13158466-13159260 REVERSE LENGTH=201)

HSP 1 Score: 69.3218 bits (168), Expect = 2.455e-12
Identity = 29/46 (63.04%), Postives = 37/46 (80.43%), Query Frame = 3

Query:    3 ILPCRHKFHASCVDAWLTTWRTFCPVCKRDARTSTSDNPPASERTP 140
            ILPC+HK+HA C+D+WL   R+FCPVCK++ RT  +D PPASE TP
Sbjct:  131 ILPCKHKYHAVCIDSWLGRCRSFCPVCKQNPRTG-NDVPPASETTP 175

[Close]

BLAST of CV090714 vs. TAIR peptide
Match: AT1G35630.1 (| Symbols: | Protease-associated (PA) RING/U-box zinc finger family protein | chr1:13163041-13164484 REVERSE LENGTH=318)

HSP 1 Score: 69.3218 bits (168), Expect = 2.455e-12
Identity = 29/46 (63.04%), Postives = 37/46 (80.43%), Query Frame = 3

Query:    3 ILPCRHKFHASCVDAWLTTWRTFCPVCKRDARTSTSDNPPASERTP 140
            ILPC+HK+HA C+D+WL   R+FCPVCK++ RT  +D PPASE TP
Sbjct:  248 ILPCKHKYHAVCIDSWLGRCRSFCPVCKQNPRTG-NDVPPASETTP 292

[Close]

BLAST of CV090714 vs. TAIR peptide
Match: AT5G66160.1 (| Symbols: ATRMR1, RMR1 | receptor homology region transmembrane domain ring H2 motif protein 1 | chr5:26445198-26446878 FORWARD LENGTH=310)

HSP 1 Score: 62.7734 bits (151), Expect = 2.298e-10
Identity = 23/46 (50.00%), Postives = 30/46 (65.22%), Query Frame = 3

Query:    3 ILPCRHKFHASCVDAWLTTWRTFCPVCKRDARTSTSDNPPASERTP 140
            +LPC+H FH +C+D+WLT W T CPVCK D RT T  +      +P
Sbjct:  247 LLPCQHAFHLNCIDSWLTKWGTSCPVCKHDIRTETMSSEVHKRESP 292

[Close]

BLAST of CV090714 vs. TAIR peptide
Match: AT5G66160.2 (| Symbols: RMR1 | receptor homology region transmembrane domain ring H2 motif protein 1 | chr5:26445198-26446722 FORWARD LENGTH=290)

HSP 1 Score: 61.6178 bits (148), Expect = 5.119e-10
Identity = 22/35 (62.86%), Postives = 27/35 (77.14%), Query Frame = 3

Query:    3 ILPCRHKFHASCVDAWLTTWRTFCPVCKRDARTST 107
            +LPC+H FH +C+D+WLT W T CPVCK D RT T
Sbjct:  247 LLPCQHAFHLNCIDSWLTKWGTSCPVCKHDIRTET 281

The following BLAST results are available for this feature:

BLAST of CV090714 vs. Populus trichocarpa peptide v2.0
BLAST of CV090714 vs. P. persica 1.0 peptide
BLAST of CV090714 vs. TrEMBL
BLAST of CV090714 vs. Vitis vinifera peptide
BLAST of CV090714 vs. TAIR peptide

BLAST of CV090714 vs. Populus trichocarpa peptide v2.0
Analysis Date: 2011-01-18 (BLAST: Vaccinium corymbosum unigene v1 vs Populus trichocarpa v2.0 peptide)
Total hits: 3


Match Name	E-value	Identity
POPTR_0019s11200.1	2.423e-40	47.67	[more]
POPTR_0013s11590.1	2.678e-39	50.87	[more]
POPTR_0005s11320.1	7.601e-10	58.33	[more]

BLAST of CV090714 vs. P. persica 1.0 peptide
Analysis Date: 2011-01-18 (BLAST: Vaccinium corymbosum unigene v1 vs Ppersica v1.0 peptide)
Total hits: 2


Match Name	E-value	Identity	Description
ppa022081m	1.675e-27	50.00		[more]
ppa015768m	1.683e-11	72.73		[more]

BLAST of CV090714 vs. TrEMBL
Analysis Date: 2011-01-18 (BLAST: Vaccinium corymbosum unigene v1 vs TrEMBL)
Total hits: 10


Match Name	E-value	Identity	Description
B9IQI2\|B9IQI2_POPTR	3.248e-38	47.67	Predicted protein OS=Populus trichocarpa GN=POPTRD...	[more]
B9MW91\|B9MW91_POPTR	2.750e-37	50.87	Predicted protein OS=Populus trichocarpa GN=POPTRD...	[more]
B9NF93\|B9NF93_POPTR	3.592e-37	50.87	Predicted protein OS=Populus trichocarpa GN=POPTRD...	[more]
D7SRI8\|D7SRI8_VITVI	3.146e-33	44.95	Whole genome shotgun sequence of line PN40024, sca...	[more]
Q9M621\|Q9M621_ARATH	2.493e-30	40.89	ReMembR-H2 protein JR702 (Fragment) OS=Arabidopsis...	[more]
Q9C8W4\|Q9C8W4_ARATH	2.493e-30	40.89	Putative uncharacterized protein F17M19.13 OS=Arab...	[more]
Q8VZ14\|Q8VZ14_ARATH	2.493e-30	40.89	Putative uncharacterized protein At1g71980 OS=Arab...	[more]
D7KZ84\|D7KZ84_ARALY	5.554e-30	39.90	Predicted protein OS=Arabidopsis lyrata subsp. lyr...	[more]
B9T6K7\|B9T6K7_RICCO	4.262e-22	49.19	Zinc finger protein, putative OS=Ricinus communis ...	[more]
Q8S7T8\|Q8S7T8_ORYSJ	7.270e-22	43.45	Putative integral membrane protein OS=Oryza sativa...	[more]

BLAST of CV090714 vs. Vitis vinifera peptide
Analysis Date: 2011-01-25 (BLAST: Vaccinium corymbosum unigene v1 vs Vitis vinifera peptide)
Total hits: 2


Match Name	E-value	Identity	Description
GSVIVT01034782001	1.426e-35	44.95	assembled CDS	[more]
GSVIVT01018761001	1.875e-11	57.78	assembled CDS	[more]

BLAST of CV090714 vs. TAIR peptide
Analysis Date: 2011-02-10 (BLAST: Vaccinium corymbosum unigene v1 vs TAIR 10 peptide)
Total hits: 7


Match Name	E-value	Identity	Description
AT1G71980.1	1.635e-32	40.89	\| Symbols: \| Protease-associated (PA) RING/U-box ...	[more]
AT1G22670.1	9.945e-22	37.87	\| Symbols: \| Protease-associated (PA) RING/U-box ...	[more]
AT4G09560.1	1.700e-13	35.86	\| Symbols: \| Protease-associated (PA) RING/U-box ...	[more]
AT1G35625.1	2.455e-12	63.04	\| Symbols: \| RING/U-box superfamily protein \| chr...	[more]
AT1G35630.1	2.455e-12	63.04	\| Symbols: \| Protease-associated (PA) RING/U-box ...	[more]
AT5G66160.1	2.298e-10	50.00	\| Symbols: ATRMR1, RMR1 \| receptor homology region...	[more]
AT5G66160.2	5.119e-10	62.86	\| Symbols: RMR1 \| receptor homology region transme...	[more]

InterPro

Analysis Name: InterProScan analysis for Vaccinium corymbosum unigene v1
Date Performed: 2011-01-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	SEG	seg	seg	coord: 54..60 score: NAcoord: 77..90 score
None	No IPR available	SEG	seg	seg	coord: 15..34 score
None	No IPR available	PANTHER	PTHR22765	RING FINGER AND PROTEASE ASSOCIATED DOMAIN-CONTAINING	coord: 1..91 score: 2.7
None	No IPR available	PANTHER	PTHR22765:SF1	SPERIZIN, RING ZINC FINGER PROTEIN 4	coord: 1..91 score: 2.7
None	No IPR available	SEG	seg	seg	coord: 47..70 score: NAcoord: 75..86 score: NAcoord: 170..185 score
None	No IPR available	SUPERFAMILY	57850	RING/U-box	coord: 1..53 score: 1.7
None	No IPR available	SEG	seg	seg	coord: 11..26 score
IPR001841	Zinc finger, RING-type	PROFILE	PS50089	ZF_RING_2	coord: 1..28 score: 8
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10	no description	coord: 2..30 score: 4.5
IPR018957	Zinc finger, C3HC4 RING-type	PFAM	PF00097	zf-C3HC4	coord: 1..27 score: 7.5

Properties


Property Name	Value
Singlet in analysis	Vaccinium corymbosum unigene v1

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>CV090714 ID=CV090714; Name=CV090714; organism=Vaccinium corymbosum; type=EST; length=742bp
GAATATTGCCTTGTCGACACAAATTCCATGCTTCTTGTGTTGACGCTTGG
CTTACGACATGGAGAACCTTTTGCCCCGTCTGCAAACGTGATGCTAGAAC
TAGCACAAGTGATAATCCACCGGCATCAGAACGCACGCCACTGCTTTCAT
CAAGCCCAGCTTCTGTTGCTTCGTCTTCTGTATTGTCCTCTGTCAGATCA
TCAACTTCAGCCATACAAATTGGGTCCCATTCAGCTTCTCACGTCCATTC
TGTATCTAGCACTCCTTATCTTCAGTCTTACATTGGAACCTACCGCCAAT
CCCCTCGGTTGAATGCAAGCCAAAGCTCAGTTGACCTTAGAAATGCATCT
TCTCAGAGATCTCATGCTTCCCATTTAGTTTCTCCCCAATCATTGGGCTA
CCCTTCTGTATCACCGGTGAATTCTAGATATATATCTCCTTATATTCATA
GTCCGGTAGGAAGCTTAAGTCATGTTGGGTCTTCTATTAATCAACAGCAC
CCTGTGCATTTTAGCGAGTCAGCTGCAAGCTTTTCTCCATTTGCTTCTGC
TCACTCTCTTCCAGAGTGCTGATTCAAGCTTGATTATGTTGAGATCTCTG
GGTAGATACAGCGTAAAATCTCATGCAAGGGAGATGAGTTCTTTTGACCT
TTGTTTCGCACTTCTAGGGCATGAAATTGGATTTGGTTCCATCAGAAGTC
GTGCACCTGTTTGTACATGGTAGCATAGGGCTTTTGTTAATT

Annotated Terms

The following terms have been associated with this EST:

Vocabulary: **Molecular Function**
Term	Definition
GO:0005515	protein binding
GO:0008270	zinc ion binding

Vocabulary: **INTERPRO**
Term	Definition
noIPR	unintegrated
IPR001841	Znf_RING
IPR013083	Znf_RING/FYVE/PHD
IPR018957	Znf_C3HC4_RING-type