CV090866

EST Overview
NameCV090866
Unique NameCV090866
TypeEST
OrganismVaccinium corymbosum (northern highbush blueberry)
Sequence length631
Libraries
Library NameType
LIBEST_014530 cDNA cold acclimated Bluecrop librarycdna_library
Unigenes
This EST is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Vaccinium corymbosum unigene v1EST
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
Vaccinium corymbosum unigene v12011-01-18
BLAST: Vaccinium corymbosum unigene v1 vs TrEMBL2011-01-18
InterProScan analysis for Vaccinium corymbosum unigene v12011-01-18
Homology
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BLAST of CV090866 vs. TrEMBL
Match: A5AVJ1|A5AVJ1_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_037974 PE=4 SV=1)

HSP 1 Score: 37.7354 bits (86), Expect = 6.032e-8
Identity = 13/34 (38.24%), Postives = 24/34 (70.59%), Query Frame = 2 
Query:  416 KSLLAK*LWRFSCERDRWWRKMVCVTHGE---GW 508
            ++LL K +WRF+CE+D  W++++   +G+   GW
Sbjct:   64 RALLGKWIWRFACEKDNLWKQVITTKYGQEDYGW 97

HSP 2 Score: 31.9574 bits (71), Expect = 6.032e-8
Identity = 13/31 (41.94%), Postives = 20/31 (64.52%), Query Frame = 3 
Query:  234 LPAYYISVFTIPISVAKR*KSCRKISFWGGG 326
            +P Y + +F +P SVAKR +  ++   WGGG
Sbjct:    1 MPIYQMFIFRMPKSVAKRVEKTQRDFLWGGG 31

HSP 3 Score: 30.8018 bits (68), Expect = 6.032e-8
Identity = 14/39 (35.90%), Postives = 22/39 (56.41%), Query Frame = 1 
Query:  316 GVVEFEYHVLDWDTVFPPIRKWSLWVRRLAIFNQKSTGK 432
            G +E + H++ WD V+    K  L +RR+A  N+   GK
Sbjct:   31 GNLEGKVHLVKWDAVYTEKHKRGLGLRRIATLNRALLGK 69
The following BLAST results are available for this feature:
BLAST of CV090866 vs. TrEMBL
Analysis Date: 2011-01-18 (BLAST: Vaccinium corymbosum unigene v1 vs TrEMBL)
Total hits: 1
Match NameE-valueIdentityDescription
A5AVJ1|A5AVJ1_VITVI6.032e-838.24Putative uncharacterized protein OS=Vitis vinifera... [more]
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InterPro
Analysis Name: InterProScan analysis for Vaccinium corymbosum unigene v1
Date Performed: 2011-01-18
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSEGsegsegcoord: 53..65
score

Properties
Property NameValue
Singlet in analysisVaccinium corymbosum unigene v1
Sequences
The following sequences are available for this feature:

EST sequence

>CV090866 ID=CV090866; Name=CV090866; organism=Vaccinium corymbosum; type=EST; length=631bp
TACCCAATAACAACAATTGTATAATTAGAATAATGAAAACCAAAATCAAA
GGTAGAATACCCTTTCACATAGCCTTATAAGAAACTATATAAAAAACAAG
AAAGGTTACCTGCACATCCCTTGATACGCTGCAGGTTGTGCAGTTAAAGT
TTCCAGAATGGACTTGTGGGAGGGAGGAGACAGTATTTACCGATATGGGT
GAGGATGACTTTCATTAAAGCACTATGTTGAGTCTGCCGGCGTACTATAT
ATCAGTCTTTACTATCCCAATTTCAGTGGCTAAACGTTAGAAAAGTTGCA
GAAAGATTTCCTTTTGGGGTGGTGGAGTTCGAGTATCATGTTTTAGATTG
GGATACAGTTTTTCCACCTATCAGGAAATGGAGTTTGTGGGTCAGGAGGC
TTGCTATATTCAATCAAAAGTCTACTGGCAAAGTAGTTGTGGAGATTCTC
GTGTGAAAGAGATAGGTGGTGGAGGAAAATGGTGTGTGTTACGCATGGGG
AAGGTTGGAGTGAGTGGTCGGGAAAGGTTCGTCTGCTACACGTANTGGGG
CTTTGCAAGCCTTCAGAGAAGGGTCGGGTGAGTTCCCTAGGCGCGCTTGT
ATGAAGGAGGGTGAAAAATTTTGGAGGATGT
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Annotated Terms
The following terms have been associated with this EST:
Vocabulary: INTERPRO
TermDefinition
noIPRunintegrated