CV190403 | GDV

EST Overview


Name	CV190403
Unique Name	CV190403
Type	EST
Organism	Vaccinium corymbosum (northern highbush blueberry)
Sequence length	629

Libraries


Library Name	Type
LIBEST_016374 Vco01	cdna_library

Unigenes

This EST is part of the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
	Vaccinium corymbosum unigene v1	EST

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
Vaccinium corymbosum unigene v1	2011-01-18
BLAST: Vaccinium corymbosum unigene v1 vs Ppersica v1.0 peptide	2011-01-18
BLAST: Vaccinium corymbosum unigene v1 vs Populus trichocarpa v2.0 peptide	2011-01-18
BLAST: Vaccinium corymbosum unigene v1 vs TrEMBL	2011-01-18
BLAST: Vaccinium corymbosum unigene v1 vs Vitis vinifera peptide	2011-01-25
BLAST: Vaccinium corymbosum unigene v1 vs TAIR 10 peptide	2011-02-10
InterProScan analysis for Vaccinium corymbosum unigene v1	2011-01-18

Homology

[Close]

BLAST of CV190403 vs. Populus trichocarpa peptide v2.0
Match: POPTR_0013s02770.3 ()

HSP 1 Score: 246.899 bits (629), Expect = 7.496e-66
Identity = 128/206 (62.14%), Postives = 154/206 (74.76%), Query Frame = 1

Query:    7 IRTLYRTLEVRDYSS-LLGSVRSYSNVIVN-----ETNFRGISSGSYECNHDLPWTSRKIQSLRSTTATELYVSMGDRRSVATQAKAPSQARQTGSFKVSMTSPGIIYEPYAPRESISFWRRWFTRSGWRRTKEDIILELKSAFAITKLRKSGYSKQKFYKEALDLYKEINTQIATGDKTSLRKAVTENMYSGLKNEIKQRESRWS 606
            IR L +T+ +R+ SS LLGS RSYS+   +     + N    SS  Y   + LPWT R   +LRST A EL + + D+RS  T+  AP QARQ GS KVS++SPG IYEPYAPR++ISFWRRWFT+SGWRRTK DIILELK+A+AI KLRK+GYSK KFY EA+ LYKEINT +A GDKT+LRKAVTE MYS LKNEIKQR+S W+
Sbjct:   10 IRALNQTIGIRESSSYLLGSSRSYSSSSTDISNGIKLNSPRFSSCLYNGRNALPWTHRSTMTLRSTMAMELSIFLNDKRSATTKVNAPPQARQMGSLKVSISSPGFIYEPYAPRDTISFWRRWFTKSGWRRTKNDIILELKNAYAIVKLRKTGYSKHKFYVEAIKLYKEINTLLANGDKTALRKAVTEKMYSELKNEIKQRQSAWN 215

[Close]

BLAST of CV190403 vs. Populus trichocarpa peptide v2.0
Match: POPTR_0013s02770.1 ()

HSP 1 Score: 246.899 bits (629), Expect = 7.496e-66
Identity = 128/206 (62.14%), Postives = 154/206 (74.76%), Query Frame = 1

Query:    7 IRTLYRTLEVRDYSS-LLGSVRSYSNVIVN-----ETNFRGISSGSYECNHDLPWTSRKIQSLRSTTATELYVSMGDRRSVATQAKAPSQARQTGSFKVSMTSPGIIYEPYAPRESISFWRRWFTRSGWRRTKEDIILELKSAFAITKLRKSGYSKQKFYKEALDLYKEINTQIATGDKTSLRKAVTENMYSGLKNEIKQRESRWS 606
            IR L +T+ +R+ SS LLGS RSYS+   +     + N    SS  Y   + LPWT R   +LRST A EL + + D+RS  T+  AP QARQ GS KVS++SPG IYEPYAPR++ISFWRRWFT+SGWRRTK DIILELK+A+AI KLRK+GYSK KFY EA+ LYKEINT +A GDKT+LRKAVTE MYS LKNEIKQR+S W+
Sbjct:   10 IRALNQTIGIRESSSYLLGSSRSYSSSSTDISNGIKLNSPRFSSCLYNGRNALPWTHRSTMTLRSTMAMELSIFLNDKRSATTKVNAPPQARQMGSLKVSISSPGFIYEPYAPRDTISFWRRWFTKSGWRRTKNDIILELKNAYAIVKLRKTGYSKHKFYVEAIKLYKEINTLLANGDKTALRKAVTEKMYSELKNEIKQRQSAWN 215

[Close]

BLAST of CV190403 vs. Populus trichocarpa peptide v2.0
Match: POPTR_0013s02770.2 ()

HSP 1 Score: 209.92 bits (533), Expect = 1.015e-54
Identity = 99/137 (72.26%), Postives = 116/137 (84.67%), Query Frame = 1

Query:  196 ELYVSMGDRRSVATQAKAPSQARQTGSFKVSMTSPGIIYEPYAPRESISFWRRWFTRSGWRRTKEDIILELKSAFAITKLRKSGYSKQKFYKEALDLYKEINTQIATGDKTSLRKAVTENMYSGLKNEIKQRESRWS 606
            EL + + D+RS  T+  AP QARQ GS KVS++SPG IYEPYAPR++ISFWRRWFT+SGWRRTK DIILELK+A+AI KLRK+GYSK KFY EA+ LYKEINT +A GDKT+LRKAVTE MYS LKNEIKQR+S W+
Sbjct:    2 ELSIFLNDKRSATTKVNAPPQARQMGSLKVSISSPGFIYEPYAPRDTISFWRRWFTKSGWRRTKNDIILELKNAYAIVKLRKTGYSKHKFYVEAIKLYKEINTLLANGDKTALRKAVTEKMYSELKNEIKQRQSAWN 138

[Close]

BLAST of CV190403 vs. P. persica 1.0 peptide
Match: ppa009363m ()

HSP 1 Score: 234.572 bits (597), Expect = 2.757e-62
Identity = 125/202 (61.88%), Postives = 146/202 (72.28%), Query Frame = 1

Query:    7 IRTLYRTLEVRDYSSLLGSVRSYSNVI--VNETNFRGISSGSYECNHDLPWTSRKIQSLRSTTATELYVSMGDRRSVATQAKAPSQARQTGSFKVSMTSPGIIYEPYAPRESISFWRRWFTRSGWRRTKEDIILELKSAFAITKLRKSGYSKQKFYKEALDLYKEINTQIATGDKTSLRKAVTENMYSGLKNEIKQRESRWS 606
            IR L+RT ++ + S LLGS RSY++ I  V E   R    G+      LPWT     +LRS  A EL +   D R ++TQ KAP+QARQ G+ KV+M SPG IYEPY PRE ISF +RWFTRSGWRRTKED +LELKSA+AITKLRK GYSK  FYKEA+ LYKEINT +A GDK SLRKAVTE M+S LKNEIKQRES W+
Sbjct:   10 IRALHRTAQISESSHLLGSSRSYASGISTVPELYCRNKGHGA------LPWTHGSSITLRSAMAVELPIFWNDTRLLSTQVKAPAQARQMGALKVAMLSPGFIYEPYTPREKISFLKRWFTRSGWRRTKEDTVLELKSAYAITKLRKKGYSKNLFYKEAIQLYKEINTLMANGDKNSLRKAVTEKMFSELKNEIKQRESIWN 205

[Close]

BLAST of CV190403 vs. TrEMBL
Match: B9RF13|B9RF13_RICCO (Pentatricopeptide repeat-containing protein, putative OS=Ricinus communis GN=RCOM_1430310 PE=4 SV=1)

HSP 1 Score: 242.276 bits (617), Expect = 2.250e-62
Identity = 126/202 (62.38%), Postives = 150/202 (74.26%), Query Frame = 1

Query:    7 IRTLYRTLEVRDYSSLLGSVRSYSNVIVN--ETNFRGISSGSYECNHDLPWTSRKIQSLRSTTATELYVSMGDRRSVATQAKAPSQARQTGSFKVSMTSPGIIYEPYAPRESISFWRRWFTRSGWRRTKEDIILELKSAFAITKLRKSGYSKQKFYKEALDLYKEINTQIATGDKTSLRKAVTENMYSGLKNEIKQRESRWS 606
            IR L RT E R+ S LL S RSY +   N  E N + I    Y+ ++  PWT     + +S+T  EL   + D+R + TQA+AP QARQ G+ KVS++SPG IYEPYAPRE I FWRRWFT+SGWRRTKEDIILELKSA+A++KLRKSGYSK + YKEA++LYKEI+T IA GDK SLRKAVTE MYS LKNEIKQRES WS
Sbjct:   10 IRALSRTAESRNPSCLLQSSRSYYSDFSNGLEFNSQRIFLSPYKGHNAFPWTHGSTMTHQSSTPIELSTFVNDKRLLTTQARAPPQARQMGALKVSVSSPGFIYEPYAPREPIPFWRRWFTKSGWRRTKEDIILELKSAYAVSKLRKSGYSKHQLYKEAIELYKEISTMIANGDKNSLRKAVTEKMYSELKNEIKQRESMWS 211

[Close]

BLAST of CV190403 vs. TrEMBL
Match: B9I7Z4|B9I7Z4_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_570888 PE=4 SV=1)

HSP 1 Score: 209.92 bits (533), Expect = 1.238e-52
Identity = 99/137 (72.26%), Postives = 116/137 (84.67%), Query Frame = 1

Query:  196 ELYVSMGDRRSVATQAKAPSQARQTGSFKVSMTSPGIIYEPYAPRESISFWRRWFTRSGWRRTKEDIILELKSAFAITKLRKSGYSKQKFYKEALDLYKEINTQIATGDKTSLRKAVTENMYSGLKNEIKQRESRWS 606
            EL + + D+RS  T+  AP QARQ GS KVS++SPG IYEPYAPR++ISFWRRWFT+SGWRRTK DIILELK+A+AI KLRK+GYSK KFY EA+ LYKEINT +A GDKT+LRKAVTE MYS LKNEIKQR+S W+
Sbjct:    2 ELSIFLNDKRSATTKVNAPPQARQMGSLKVSISSPGFIYEPYAPRDTISFWRRWFTKSGWRRTKNDIILELKNAYAIVKLRKTGYSKHKFYVEAIKLYKEINTLLANGDKTALRKAVTEKMYSELKNEIKQRQSAWN 138

[Close]

BLAST of CV190403 vs. TrEMBL
Match: B3H4A1|B3H4A1_ARATH (Uncharacterized protein At5g27395.2 OS=Arabidopsis thaliana GN=At5g27395 PE=4 SV=1)

HSP 1 Score: 201.06 bits (510), Expect = 5.749e-50
Identity = 111/203 (54.68%), Postives = 137/203 (67.49%), Query Frame = 1

Query:    4 TIRTLYRTLEVRDYSSL-LGSVRSYSNVIVNETNFRGISSGS--YECNHDLPWTSRKIQSLRSTTATELYVSMGDRRSVATQAKAPSQARQTGSFKVSMTSPGIIYEPYAPRESISFWRRWFTRSGWRRTKEDIILELKSAFAITKLRKSGYSKQKFYKEALDLYKEINTQIATGDKTSLRKAVTENMYSGLKNEIKQRESRW 603
            T+R+L +T   R+ SSL  G  RSY + + +     G S+ S  YE +      S     LRST   E    M ++RS  TQ KAP Q ++TG+ +VSM SPG +YEPYA RE IS WRR FTRSGWRRTKED I EL+SA+AI KLRK+GYSK  FY EAL+LYK+IN Q+A G+K ++RK VTE MYS LKNEIKQRE+ W
Sbjct:    9 TVRSLLKTAGSRESSSLPFGCWRSYHSSLCHVPEAHGKSAYSRLYEGH------SVNTHLLRSTMIAEFLPFMNEKRSATTQVKAPPQLQKTGAVRVSMVSPGFVYEPYALREKISIWRRCFTRSGWRRTKEDFIRELRSAYAIAKLRKTGYSKNTFYIEALELYKQINIQMANGEKKTIRKNVTERMYSALKNEIKQREAMW 205

[Close]

BLAST of CV190403 vs. TrEMBL
Match: Q8GXP7|Q8GXP7_ARATH (Putative uncharacterized protein At5g27390/F21A20_100 OS=Arabidopsis thaliana GN=At5g27390/F21A20_100 PE=2 SV=1)

HSP 1 Score: 194.512 bits (493), Expect = 5.381e-48
Identity = 111/220 (50.45%), Postives = 137/220 (62.27%), Query Frame = 1

Query:    4 TIRTLYRTLEVRDYSSL------------------LGSVRSYSNVIVNETNFRGISSGS--YECNHDLPWTSRKIQSLRSTTATELYVSMGDRRSVATQAKAPSQARQTGSFKVSMTSPGIIYEPYAPRESISFWRRWFTRSGWRRTKEDIILELKSAFAITKLRKSGYSKQKFYKEALDLYKEINTQIATGDKTSLRKAVTENMYSGLKNEIKQRESRW 603
            T+R+L +T   R+ SSL                   G  RSY + + +     G S+ S  YE +      S     LRST   E    M ++RS  TQ KAP Q ++TG+ +VSM SPG +YEPYA RE IS WRR FTRSGWRRTKED I EL+SA+AI KLRK+GYSK  FY EAL+LYK+IN Q+A G+K ++RK VTE MYS LKNEIKQRE+ W
Sbjct:    9 TVRSLLKTAGSRESSSLPFRNGNEFSLIQIGDDFRFGCWRSYHSSLCHVPEAHGKSAYSRLYEGH------SVNTHLLRSTMIAEFLPFMNEKRSATTQVKAPPQLQKTGAVRVSMVSPGFVYEPYALREKISIWRRCFTRSGWRRTKEDFIRELRSAYAIAKLRKTGYSKNTFYIEALELYKQINIQMANGEKKTIRKNVTERMYSALKNEIKQREAMW 222

[Close]

BLAST of CV190403 vs. TrEMBL
Match: D7M651|D7M651_ARALY (Protein translocase OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_910846 PE=4 SV=1)

HSP 1 Score: 192.2 bits (487), Expect = 2.671e-47
Identity = 109/220 (49.55%), Postives = 137/220 (62.27%), Query Frame = 1

Query:    4 TIRTLYRTLEVRDYSSL------------------LGSVRSYSNVI--VNETNFRGISSGSYECNHDLPWTSRKIQSLRSTTATELYVSMGDRRSVATQAKAPSQARQTGSFKVSMTSPGIIYEPYAPRESISFWRRWFTRSGWRRTKEDIILELKSAFAITKLRKSGYSKQKFYKEALDLYKEINTQIATGDKTSLRKAVTENMYSGLKNEIKQRESRW 603
            T+R+L +T   R+ SSL                   G  RSY + +  V E + + + S  YE +++          LRST   E      D+RS  TQ KAP Q ++TG+ +VSM SPG +YEPYA +E IS WRR FTRSGWRRTKED I EL+SA+AI KLRK+GYSK  FY EAL+LYK+IN  +A GDK ++RK VTE MYS LKNEIKQRE+ W
Sbjct:    9 TVRSLLKTAGSRESSSLPFRNGNEFSLIQIGDDFRFGCWRSYHSSLYQVPEAHGKSVYSRLYEGHNNA-----NTHLLRSTMIAESLPFTNDKRSATTQVKAPPQLQKTGAVRVSMVSPGFVYEPYALQEKISIWRRCFTRSGWRRTKEDFIRELRSAYAIAKLRKTGYSKNTFYIEALELYKQINILMANGDKKTIRKNVTERMYSALKNEIKQREAMW 223

[Close]

BLAST of CV190403 vs. TrEMBL
Match: D7TV27|D7TV27_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_30.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00022058001 PE=4 SV=1)

HSP 1 Score: 183.341 bits (464), Expect = 1.241e-44
Identity = 85/105 (80.95%), Postives = 95/105 (90.48%), Query Frame = 1

Query:  289 MTSPGIIYEPYAPRESISFWRRWFTRSGWRRTKEDIILELKSAFAITKLRKSGYSKQKFYKEALDLYKEINTQIATGDKTSLRKAVTENMYSGLKNEIKQRESRW 603
            M SPGIIYEPYAPRE ISFW+RWFTR+GWRRTKEDI+LELKSA+A+ KLRK GYS+QKFY EA+DLYKEIN+QIA   K SLRK+VTENMYS LKNEIKQRES+W
Sbjct:    1 MQSPGIIYEPYAPREPISFWKRWFTRNGWRRTKEDIVLELKSAYAVAKLRKIGYSRQKFYTEAVDLYKEINSQIANSAKASLRKSVTENMYSALKNEIKQRESKW 105

[Close]

BLAST of CV190403 vs. TrEMBL
Match: B4G030|B4G030_MAIZE (Putative uncharacterized protein OS=Zea mays PE=2 SV=1)

HSP 1 Score: 167.933 bits (424), Expect = 5.393e-40
Identity = 91/206 (44.17%), Postives = 134/206 (65.05%), Query Frame = 1

Query:   10 RTLYRTLEVRDYSSLLGS--VRSYSNVIVNETNFRGISSGSYECNHDLPWTSRKIQSLRSTTATELYVSMGDRRSVATQA--KAPSQARQTGSFKVSMTSPGIIYEPYAPRESISFWRRWFTRSGWRRTKEDIILELKSAFAITKLR-KSGYSKQKFYKEALDLYKEINTQIATGDKTSLRKAVTENMYSGLKNEIKQRESRWSTL 612
            R++YR     DY + +      +++ V V     RG +S +Y  +  +         +      +L V M   R ++T A  K P  AR+ G  KV+M SPG +YEPY+PRE I FW+RWFT SGWRRTKEDIILE+K+A+A+++LR K+GY+K +FY +AL +YKE+NT +A GD +SLRK +TE M+S +KNE+K+R+S W+++
Sbjct:   16 RSIYRPPAPTDYHASVSRPFAPTHTGVCV-----RGFASLTYNASSMIGHNLEGPLPVHIVKVLDLVVHMNHARPMSTAAASKVPVGARKVG-LKVAMMSPGFVYEPYSPRERIPFWKRWFTLSGWRRTKEDIILEMKNAYAVSRLRKKTGYTKNQFYDQALKIYKEVNTLMAHGDTSSLRKILTERMHSTIKNELKRRQSMWNSV 215

[Close]

BLAST of CV190403 vs. TrEMBL
Match: B7ZXE0|B7ZXE0_MAIZE (Putative uncharacterized protein OS=Zea mays PE=2 SV=1)

HSP 1 Score: 166.392 bits (420), Expect = 1.569e-39
Identity = 90/206 (43.69%), Postives = 134/206 (65.05%), Query Frame = 1

Query:   10 RTLYRTLEVRDYSSLLGS--VRSYSNVIVNETNFRGISSGSYECNHDLPWTSRKIQSLRSTTATELYVSMGDRRSVATQA--KAPSQARQTGSFKVSMTSPGIIYEPYAPRESISFWRRWFTRSGWRRTKEDIILELKSAFAITKLR-KSGYSKQKFYKEALDLYKEINTQIATGDKTSLRKAVTENMYSGLKNEIKQRESRWSTL 612
            R++YR     DY + +      +++ V V     RG +S +Y  +  +         +      +L V M   R ++T A  K P  AR+ G  KV+M SPG +YEPY+PRE I FW+RWFT SGWRRTKEDIILE+K+A+A+++LR K+GY+K +FY +AL +YKE+NT +A GD +SLR+ +TE M+S +KNE+K+R+S W+++
Sbjct:   16 RSIYRPPAPTDYHASVSRPFAPTHTGVCV-----RGFASLTYNASSMIGHNLEGPLPVHIVKVLDLVVHMNHARPMSTAAASKVPVGARKVG-LKVAMMSPGFVYEPYSPRERIPFWKRWFTLSGWRRTKEDIILEMKNAYAVSRLRKKTGYTKNQFYDQALKIYKEVNTLMAHGDTSSLREILTERMHSTIKNELKRRQSMWNSV 215

[Close]

BLAST of CV190403 vs. TrEMBL
Match: B9FUJ1|B9FUJ1_ORYSJ (Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_25363 PE=4 SV=1)

HSP 1 Score: 159.073 bits (401), Expect = 2.505e-37
Identity = 86/191 (45.03%), Postives = 123/191 (64.40%), Query Frame = 1

Query:   97 TNFRGISSGSYECNHDLPWTSRKIQSLRSTTATELYVSMGDRRSVATQAKA----------PSQ--------ARQTGSFKVSMTSPGIIYEPYAPRESISFWRRWFTRSGWRRTKEDIILELKSAFAITKLR-KSGYSKQKFYKEALDLYKEINTQIATGDKTSLRKAVTENMYSGLKNEIKQRESRWSTL 612
            T  RG +S  Y     + +  R    + +    EL   +   RS++T A+A          PSQ        AR+ G  KV M SPG +YEPY+ RE I FW+RWFT SGWRRTKED+ILE+K+A+A+++LR K+GY+K++FY +A  +YKE+NT +A GD +SLRK +TE M+S +KNE+K+R+S WS++
Sbjct:   46 TRARGFASSPYNAGGVIGYRGRS--PVYTVKVLELLFQINHTRSMSTAAQAEPPSLSKAPTPSQTSSKVPLGARKVG-MKVVMMSPGFVYEPYSIREPIPFWKRWFTPSGWRRTKEDVILEMKNAYAVSRLRKKTGYTKKEFYDQAFKIYKEVNTLMAHGDTSSLRKILTERMHSTIKNELKKRQSMWSSV 233

[Close]

BLAST of CV190403 vs. TrEMBL
Match: B8B5D5|B8B5D5_ORYSI (Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_27102 PE=4 SV=1)

HSP 1 Score: 159.073 bits (401), Expect = 2.505e-37
Identity = 86/191 (45.03%), Postives = 123/191 (64.40%), Query Frame = 1

Query:   97 TNFRGISSGSYECNHDLPWTSRKIQSLRSTTATELYVSMGDRRSVATQAKA----------PSQ--------ARQTGSFKVSMTSPGIIYEPYAPRESISFWRRWFTRSGWRRTKEDIILELKSAFAITKLR-KSGYSKQKFYKEALDLYKEINTQIATGDKTSLRKAVTENMYSGLKNEIKQRESRWSTL 612
            T  RG +S  Y     + +  R    + +    EL   +   RS++T A+A          PSQ        AR+ G  KV M SPG +YEPY+ RE I FW+RWFT SGWRRTKED+ILE+K+A+A+++LR K+GY+K++FY +A  +YKE+NT +A GD +SLRK +TE M+S +KNE+K+R+S WS++
Sbjct:   46 TRARGFASSPYNAGGVIGYRGRS--PVYTVKVLELLFQINHTRSMSTAAQAEPPSLSKAPTPSQTSSKVPLGARKVG-MKVVMMSPGFVYEPYSIREPIPFWKRWFTPSGWRRTKEDVILEMKNAYAVSRLRKKTGYTKKEFYDQAFKIYKEVNTLMAHGDTSSLRKILTERMHSTIKNELKKRQSMWSSV 233

[Close]

BLAST of CV190403 vs. Vitis vinifera peptide
Match: GSVIVT01022058001 (assembled CDS)

HSP 1 Score: 183.341 bits (464), Expect = 6.234e-47
Identity = 85/105 (80.95%), Postives = 95/105 (90.48%), Query Frame = 1

Query:  289 MTSPGIIYEPYAPRESISFWRRWFTRSGWRRTKEDIILELKSAFAITKLRKSGYSKQKFYKEALDLYKEINTQIATGDKTSLRKAVTENMYSGLKNEIKQRESRW 603
            M SPGIIYEPYAPRE ISFW+RWFTR+GWRRTKEDI+LELKSA+A+ KLRK GYS+QKFY EA+DLYKEIN+QIA   K SLRK+VTENMYS LKNEIKQRES+W
Sbjct:    1 MQSPGIIYEPYAPREPISFWKRWFTRNGWRRTKEDIVLELKSAYAVAKLRKIGYSRQKFYTEAVDLYKEINSQIANSAKASLRKSVTENMYSALKNEIKQRESKW 105

[Close]

BLAST of CV190403 vs. Vitis vinifera peptide
Match: GSVIVT01000001001 (assembled CDS)

HSP 1 Score: 74.3294 bits (181), Expect = 4.078e-14
Identity = 42/106 (39.62%), Postives = 60/106 (56.60%), Query Frame = 1

Query:    4 TIRTLYRTLEVRDYSSLLGSVRSYSNVIVNETNFRGISSGSYECNHD-LPWTSRKIQSLRSTTATELYVSMGDRRSVATQAKAPSQARQTGSFKVSMTSPGIIYEP 318
            +I  LYRT E+R +S LLGS RSYS V +N       ++  +   H+ LPWT R   +L S+  TE ++ + D R + T+AKAP+Q RQ  S+   +T    I  P
Sbjct:    8 SIHNLYRTAEIRPFSYLLGSSRSYSIVTINVPKINCWATSYFYKGHNVLPWTCRSTMTLHSSMPTEPWILLNDARLLTTRAKAPAQVRQMVSYPFFLTDGKYIALP 113

[Close]

BLAST of CV190403 vs. TAIR peptide
Match: AT5G27395.2 (| Symbols: | Mitochondrial inner membrane translocase complex, subunit Tim44-related protein | chr5:9671845-9674085 REVERSE LENGTH=296)

HSP 1 Score: 201.06 bits (510), Expect = 4.154e-52
Identity = 111/203 (54.68%), Postives = 137/203 (67.49%), Query Frame = 1

Query:    4 TIRTLYRTLEVRDYSSL-LGSVRSYSNVIVNETNFRGISSGS--YECNHDLPWTSRKIQSLRSTTATELYVSMGDRRSVATQAKAPSQARQTGSFKVSMTSPGIIYEPYAPRESISFWRRWFTRSGWRRTKEDIILELKSAFAITKLRKSGYSKQKFYKEALDLYKEINTQIATGDKTSLRKAVTENMYSGLKNEIKQRESRW 603
            T+R+L +T   R+ SSL  G  RSY + + +     G S+ S  YE +      S     LRST   E    M ++RS  TQ KAP Q ++TG+ +VSM SPG +YEPYA RE IS WRR FTRSGWRRTKED I EL+SA+AI KLRK+GYSK  FY EAL+LYK+IN Q+A G+K ++RK VTE MYS LKNEIKQRE+ W
Sbjct:    9 TVRSLLKTAGSRESSSLPFGCWRSYHSSLCHVPEAHGKSAYSRLYEGH------SVNTHLLRSTMIAEFLPFMNEKRSATTQVKAPPQLQKTGAVRVSMVSPGFVYEPYALREKISIWRRCFTRSGWRRTKEDFIRELRSAYAIAKLRKTGYSKNTFYIEALELYKQINIQMANGEKKTIRKNVTERMYSALKNEIKQREAMW 205

[Close]

BLAST of CV190403 vs. TAIR peptide
Match: AT5G27395.1 (| Symbols: | Mitochondrial inner membrane translocase complex, subunit Tim44-related protein | chr5:9671845-9674085 REVERSE LENGTH=313)

HSP 1 Score: 194.512 bits (493), Expect = 3.888e-50
Identity = 111/220 (50.45%), Postives = 137/220 (62.27%), Query Frame = 1

Query:    4 TIRTLYRTLEVRDYSSL------------------LGSVRSYSNVIVNETNFRGISSGS--YECNHDLPWTSRKIQSLRSTTATELYVSMGDRRSVATQAKAPSQARQTGSFKVSMTSPGIIYEPYAPRESISFWRRWFTRSGWRRTKEDIILELKSAFAITKLRKSGYSKQKFYKEALDLYKEINTQIATGDKTSLRKAVTENMYSGLKNEIKQRESRW 603
            T+R+L +T   R+ SSL                   G  RSY + + +     G S+ S  YE +      S     LRST   E    M ++RS  TQ KAP Q ++TG+ +VSM SPG +YEPYA RE IS WRR FTRSGWRRTKED I EL+SA+AI KLRK+GYSK  FY EAL+LYK+IN Q+A G+K ++RK VTE MYS LKNEIKQRE+ W
Sbjct:    9 TVRSLLKTAGSRESSSLPFRNGNEFSLIQIGDDFRFGCWRSYHSSLCHVPEAHGKSAYSRLYEGH------SVNTHLLRSTMIAEFLPFMNEKRSATTQVKAPPQLQKTGAVRVSMVSPGFVYEPYALREKISIWRRCFTRSGWRRTKEDFIRELRSAYAIAKLRKTGYSKNTFYIEALELYKQINIQMANGEKKTIRKNVTERMYSALKNEIKQREAMW 222

The following BLAST results are available for this feature:

BLAST of CV190403 vs. Populus trichocarpa peptide v2.0
BLAST of CV190403 vs. P. persica 1.0 peptide
BLAST of CV190403 vs. TrEMBL
BLAST of CV190403 vs. Vitis vinifera peptide
BLAST of CV190403 vs. TAIR peptide

BLAST of CV190403 vs. Populus trichocarpa peptide v2.0
Analysis Date: 2011-01-18 (BLAST: Vaccinium corymbosum unigene v1 vs Populus trichocarpa v2.0 peptide)
Total hits: 3


Match Name	E-value	Identity
POPTR_0013s02770.3	7.496e-66	62.14	[more]
POPTR_0013s02770.1	7.496e-66	62.14	[more]
POPTR_0013s02770.2	1.015e-54	72.26	[more]

BLAST of CV190403 vs. P. persica 1.0 peptide
Analysis Date: 2011-01-18 (BLAST: Vaccinium corymbosum unigene v1 vs Ppersica v1.0 peptide)
Total hits: 1


Match Name	E-value	Identity	Description
ppa009363m	2.757e-62	61.88		[more]

BLAST of CV190403 vs. TrEMBL
Analysis Date: 2011-01-18 (BLAST: Vaccinium corymbosum unigene v1 vs TrEMBL)
Total hits: 10


Match Name	E-value	Identity	Description
B9RF13\|B9RF13_RICCO	2.250e-62	62.38	Pentatricopeptide repeat-containing protein, putat...	[more]
B9I7Z4\|B9I7Z4_POPTR	1.238e-52	72.26	Predicted protein OS=Populus trichocarpa GN=POPTRD...	[more]
B3H4A1\|B3H4A1_ARATH	5.749e-50	54.68	Uncharacterized protein At5g27395.2 OS=Arabidopsis...	[more]
Q8GXP7\|Q8GXP7_ARATH	5.381e-48	50.45	Putative uncharacterized protein At5g27390/F21A20_...	[more]
D7M651\|D7M651_ARALY	2.671e-47	49.55	Protein translocase OS=Arabidopsis lyrata subsp. l...	[more]
D7TV27\|D7TV27_VITVI	1.241e-44	80.95	Whole genome shotgun sequence of line PN40024, sca...	[more]
B4G030\|B4G030_MAIZE	5.393e-40	44.17	Putative uncharacterized protein OS=Zea mays PE=2 ...	[more]
B7ZXE0\|B7ZXE0_MAIZE	1.569e-39	43.69	Putative uncharacterized protein OS=Zea mays PE=2 ...	[more]
B9FUJ1\|B9FUJ1_ORYSJ	2.505e-37	45.03	Putative uncharacterized protein OS=Oryza sativa s...	[more]
B8B5D5\|B8B5D5_ORYSI	2.505e-37	45.03	Putative uncharacterized protein OS=Oryza sativa s...	[more]

BLAST of CV190403 vs. Vitis vinifera peptide
Analysis Date: 2011-01-25 (BLAST: Vaccinium corymbosum unigene v1 vs Vitis vinifera peptide)
Total hits: 2


Match Name	E-value	Identity	Description
GSVIVT01022058001	6.234e-47	80.95	assembled CDS	[more]
GSVIVT01000001001	4.078e-14	39.62	assembled CDS	[more]

BLAST of CV190403 vs. TAIR peptide
Analysis Date: 2011-02-10 (BLAST: Vaccinium corymbosum unigene v1 vs TAIR 10 peptide)
Total hits: 2


Match Name	E-value	Identity	Description
AT5G27395.2	4.154e-52	54.68	\| Symbols: \| Mitochondrial inner membrane translo...	[more]
AT5G27395.1	3.888e-50	50.45	\| Symbols: \| Mitochondrial inner membrane translo...	[more]

InterPro

Analysis Name: InterProScan analysis for Vaccinium corymbosum unigene v1
Date Performed: 2011-01-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR007379	Membrane transporter, Tim44-related/Ribosomal protein L45	PFAM	PF04280	Tim44	coord: 137..202 score: 2.3
None	No IPR available	SUPERFAMILY	54427	NTF2-like	coord: 137..204 score: 1.5

Properties


Property Name	Value
Singlet in analysis	Vaccinium corymbosum unigene v1

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>CV190403 ID=CV190403; Name=CV190403; organism=Vaccinium corymbosum; type=EST; length=629bp
GGGACGATTCGTACCCTATATCGAACGCTTGAAGTTCGTGATTATTCTTC
ACTGCTTGGAAGCGTAAGGAGCTATTCAAATGTTATTGTGAATGAAACTA
ATTTTCGGGGCATTTCTTCTGGCTCATATGAGTGCAACCATGATCTTCCT
TGGACTTCCAGAAAGATACAGTCACTTCGTTCTACGACGGCCACTGAGTT
ATATGTTTCCATGGGAGACAGGAGGTCAGTAGCAACACAAGCAAAAGCCC
CTTCTCAAGCGCGACAAACGGGGTCGTTCAAAGTGTCCATGACAAGCCCT
GGAATCATTTATGAGCCATATGCACCTCGTGAATCAATTTCTTTCTGGCG
GAGATGGTTCACGAGAAGCGGTTGGAGAAGAACAAAGGAGGACATTATTT
TAGAGCTCAAAAGTGCTTTTGCAATTACTAAACTACGGAAATCTGGATAT
TCAAAACAGAAGTTCTATAAAGAAGCCTTGGATTTGTACAAAGAGATAAA
CACTCAAATTGCGACAGGTGACAAAACGTCATTGAGGAAAGCAGTGACAG
AGAATATGTACTCTGGCCTCAAGAATGAAATCAAACAAAGGGAATCGAGA
TGGAGTACACTCCTACTGGGAACTAATAG

Annotated Terms

The following terms have been associated with this EST:

Vocabulary: **Cellular Component**
Term	Definition
GO:0005744	TIM23 mitochondrial import inner membrane translocase complex

Vocabulary: **Biological Process**
Term	Definition
GO:0006886	intracellular protein transport

Vocabulary: **Molecular Function**
Term	Definition
GO:0015450	protein-transporting ATPase activity

Vocabulary: **INTERPRO**
Term	Definition
IPR007379	Tim44-like_dom
noIPR	unintegrated