CV190788 | GDV

EST Overview


Name	CV190788
Unique Name	CV190788
Type	EST
Organism	Vaccinium corymbosum (northern highbush blueberry)
Sequence length	451

Libraries


Library Name	Type
LIBEST_016374 Vco01	cdna_library

Unigenes

This EST is part of the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
	Vaccinium corymbosum unigene v1	EST

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
Vaccinium corymbosum unigene v1	2011-01-18
BLAST: Vaccinium corymbosum unigene v1 vs Ppersica v1.0 peptide	2011-01-18
BLAST: Vaccinium corymbosum unigene v1 vs Swissprot	2011-01-18
BLAST: Vaccinium corymbosum unigene v1 vs Populus trichocarpa v2.0 peptide	2011-01-18
BLAST: Vaccinium corymbosum unigene v1 vs TrEMBL	2011-01-18
BLAST: Vaccinium corymbosum unigene v1 vs Vitis vinifera peptide	2011-01-25
BLAST: Vaccinium corymbosum unigene v1 vs TAIR 10 peptide	2011-02-10

Homology

[Close]

BLAST of CV190788 vs. DB:swissprot:display
Match: IF5A4_SOLTU (Eukaryotic translation initiation factor 5A-4 OS=Solanum tuberosum GN=EIF5A4 PE=2 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 1.413e-19
Identity = 47/48 (97.92%), Postives = 48/48 (100.00%), Query Frame = 3

Query:    3 KDDLRLPTDDNLLSQIKDGFAEGKDLVVSVMSAMGEEQINALKDIGPK 146
            KDDLRLPTDD+LLSQIKDGFAEGKDLVVSVMSAMGEEQINALKDIGPK
Sbjct:  112 KDDLRLPTDDSLLSQIKDGFAEGKDLVVSVMSAMGEEQINALKDIGPK 159

[Close]

BLAST of CV190788 vs. DB:swissprot:display
Match: IF5A3_SOLLC (Eukaryotic translation initiation factor 5A-3 OS=Solanum lycopersicum PE=2 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 7.013e-19
Identity = 46/48 (95.83%), Postives = 47/48 (97.92%), Query Frame = 3

Query:    3 KDDLRLPTDDNLLSQIKDGFAEGKDLVVSVMSAMGEEQINALKDIGPK 146
            KDDLRLPTD+NLLS IKDGFAEGKDLVVSVMSAMGEEQINALKDIGPK
Sbjct:  112 KDDLRLPTDENLLSLIKDGFAEGKDLVVSVMSAMGEEQINALKDIGPK 159

[Close]

BLAST of CV190788 vs. DB:swissprot:display
Match: IF5A2_NICPL (Eukaryotic translation initiation factor 5A-2 OS=Nicotiana plumbaginifolia GN=EIF-5A2 PE=2 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 9.159e-19
Identity = 46/48 (95.83%), Postives = 47/48 (97.92%), Query Frame = 3

Query:    3 KDDLRLPTDDNLLSQIKDGFAEGKDLVVSVMSAMGEEQINALKDIGPK 146
            KDDLRLPTDDNLL+QIKDGFAEGKDLVVSVMSAMGEEQI ALKDIGPK
Sbjct:  112 KDDLRLPTDDNLLTQIKDGFAEGKDLVVSVMSAMGEEQICALKDIGPK 159

[Close]

BLAST of CV190788 vs. DB:swissprot:display
Match: IF5A_MANES (Eukaryotic translation initiation factor 5A OS=Manihot esculenta PE=2 SV=2)

HSP 1 Score: 89.3521 bits (220), Expect = 7.754e-18
Identity = 44/48 (91.67%), Postives = 47/48 (97.92%), Query Frame = 3

Query:    3 KDDLRLPTDDNLLSQIKDGFAEGKDLVVSVMSAMGEEQINALKDIGPK 146
            KDDLRLPTD+NLLSQIKDGFAEGKDLVVSVMSAMGEE+I +LKDIGPK
Sbjct:  112 KDDLRLPTDENLLSQIKDGFAEGKDLVVSVMSAMGEERICSLKDIGPK 159

[Close]

BLAST of CV190788 vs. DB:swissprot:display
Match: IF5A2_MEDSA (Eukaryotic translation initiation factor 5A-2 OS=Medicago sativa PE=2 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 1.727e-17
Identity = 43/48 (89.58%), Postives = 47/48 (97.92%), Query Frame = 3

Query:    3 KDDLRLPTDDNLLSQIKDGFAEGKDLVVSVMSAMGEEQINALKDIGPK 146
            KDDL+LPTDD+LL+QIKDGFA+GKDLVVSVMSAMGEEQI ALKDIGPK
Sbjct:  112 KDDLKLPTDDSLLTQIKDGFADGKDLVVSVMSAMGEEQICALKDIGPK 159

[Close]

BLAST of CV190788 vs. DB:swissprot:display
Match: IF5A2_SOLLC (Eukaryotic translation initiation factor 5A-2 OS=Solanum lycopersicum PE=2 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 3.848e-17
Identity = 41/48 (85.42%), Postives = 45/48 (93.75%), Query Frame = 3

Query:    3 KDDLRLPTDDNLLSQIKDGFAEGKDLVVSVMSAMGEEQINALKDIGPK 146
            KDDLRLPTD+NLL Q+KDGF EGKDLVVSVMSAMGEEQINA+KD+G K
Sbjct:  112 KDDLRLPTDENLLKQVKDGFQEGKDLVVSVMSAMGEEQINAVKDVGTK 159

[Close]

BLAST of CV190788 vs. DB:swissprot:display
Match: IF5A_SENVE (Eukaryotic translation initiation factor 5A OS=Senecio vernalis GN=EIFSV1 PE=2 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 5.026e-17
Identity = 43/48 (89.58%), Postives = 45/48 (93.75%), Query Frame = 3

Query:    3 KDDLRLPTDDNLLSQIKDGFAEGKDLVVSVMSAMGEEQINALKDIGPK 146
            KDDL+LPTDD LL+QIKDGF EGKDLVVSVMSAMGEEQI ALKDIGPK
Sbjct:  112 KDDLKLPTDDALLTQIKDGFGEGKDLVVSVMSAMGEEQICALKDIGPK 159

[Close]

BLAST of CV190788 vs. DB:swissprot:display
Match: IF5A5_SOLTU (Eukaryotic translation initiation factor 5A-5 OS=Solanum tuberosum GN=EIF5A5 PE=2 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 6.564e-17
Identity = 41/48 (85.42%), Postives = 45/48 (93.75%), Query Frame = 3

Query:    3 KDDLRLPTDDNLLSQIKDGFAEGKDLVVSVMSAMGEEQINALKDIGPK 146
            KDDLRLPTDD LL+Q+KDGFAEGKDLV+SVMSAMGEEQI  +KDIGPK
Sbjct:  112 KDDLRLPTDDTLLAQVKDGFAEGKDLVLSVMSAMGEEQICGIKDIGPK 159

[Close]

BLAST of CV190788 vs. DB:swissprot:display
Match: IF5A1_SOLLC (Eukaryotic translation initiation factor 5A-1 OS=Solanum lycopersicum PE=2 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 6.564e-17
Identity = 41/48 (85.42%), Postives = 45/48 (93.75%), Query Frame = 3

Query:    3 KDDLRLPTDDNLLSQIKDGFAEGKDLVVSVMSAMGEEQINALKDIGPK 146
            KDDLRLPTDD LL+Q+KDGFAEGKDLV+SVMSAMGEEQI  +KDIGPK
Sbjct:  112 KDDLRLPTDDTLLAQVKDGFAEGKDLVLSVMSAMGEEQICGIKDIGPK 159

[Close]

BLAST of CV190788 vs. DB:swissprot:display
Match: IF5A3_SOLTU (Eukaryotic translation initiation factor 5A-3 OS=Solanum tuberosum GN=EIF5A3 PE=2 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 8.573e-17
Identity = 41/48 (85.42%), Postives = 45/48 (93.75%), Query Frame = 3

Query:    3 KDDLRLPTDDNLLSQIKDGFAEGKDLVVSVMSAMGEEQINALKDIGPK 146
            KDDLRLPTD++LL Q+KDGF EGKDLVVSVMSAMGEEQINA+KDIG K
Sbjct:  112 KDDLRLPTDESLLKQVKDGFQEGKDLVVSVMSAMGEEQINAIKDIGTK 159

[Close]

BLAST of CV190788 vs. Populus trichocarpa peptide v2.0
Match: POPTR_0006s19870.1 ()

HSP 1 Score: 88.9669 bits (219), Expect = 1.353e-18
Identity = 44/48 (91.67%), Postives = 46/48 (95.83%), Query Frame = 3

Query:    3 KDDLRLPTDDNLLSQIKDGFAEGKDLVVSVMSAMGEEQINALKDIGPK 146
            KDDLRLPTDD+LL+QIKDGF EGKDLVVSVMSAMGEEQI ALKDIGPK
Sbjct:  112 KDDLRLPTDDSLLTQIKDGFGEGKDLVVSVMSAMGEEQICALKDIGPK 159

[Close]

BLAST of CV190788 vs. Populus trichocarpa peptide v2.0
Match: POPTR_0008s09150.1 ()

HSP 1 Score: 85.5001 bits (210), Expect = 1.496e-17
Identity = 41/48 (85.42%), Postives = 46/48 (95.83%), Query Frame = 3

Query:    3 KDDLRLPTDDNLLSQIKDGFAEGKDLVVSVMSAMGEEQINALKDIGPK 146
            KDDL+LPTDD+LL+QIKDGF EGKDLVV+VMS+MGEEQI ALKDIGPK
Sbjct:  112 KDDLKLPTDDSLLTQIKDGFGEGKDLVVTVMSSMGEEQICALKDIGPK 159

[Close]

BLAST of CV190788 vs. Populus trichocarpa peptide v2.0
Match: POPTR_0018s11660.1 ()

HSP 1 Score: 85.5001 bits (210), Expect = 1.496e-17
Identity = 42/48 (87.50%), Postives = 45/48 (93.75%), Query Frame = 3

Query:    3 KDDLRLPTDDNLLSQIKDGFAEGKDLVVSVMSAMGEEQINALKDIGPK 146
            KDDLRLPTDD+LL+ IKDGF EGKDLVV+VMSAMGEEQI ALKDIGPK
Sbjct:  112 KDDLRLPTDDSLLTPIKDGFGEGKDLVVTVMSAMGEEQICALKDIGPK 159

[Close]

BLAST of CV190788 vs. Populus trichocarpa peptide v2.0
Match: POPTR_0010s17020.1 ()

HSP 1 Score: 84.7297 bits (208), Expect = 2.553e-17
Identity = 40/48 (83.33%), Postives = 46/48 (95.83%), Query Frame = 3

Query:    3 KDDLRLPTDDNLLSQIKDGFAEGKDLVVSVMSAMGEEQINALKDIGPK 146
            KDDLRLPTD++LLSQIKDGF +GKDLVV+VMS+MGEEQI ALKD+GPK
Sbjct:  112 KDDLRLPTDESLLSQIKDGFGDGKDLVVTVMSSMGEEQICALKDVGPK 159

[Close]

BLAST of CV190788 vs. P. persica 1.0 peptide
Match: ppa012654m ()

HSP 1 Score: 88.9669 bits (219), Expect = 9.723e-19
Identity = 44/48 (91.67%), Postives = 46/48 (95.83%), Query Frame = 3

Query:    3 KDDLRLPTDDNLLSQIKDGFAEGKDLVVSVMSAMGEEQINALKDIGPK 146
            KDDLRLPTDD+LL+QIKDGF EGKDLVVSVMSAMGEEQI ALKDIGPK
Sbjct:  112 KDDLRLPTDDSLLTQIKDGFGEGKDLVVSVMSAMGEEQICALKDIGPK 159

[Close]

BLAST of CV190788 vs. P. persica 1.0 peptide
Match: ppa012643m ()

HSP 1 Score: 87.8113 bits (216), Expect = 2.166e-18
Identity = 43/48 (89.58%), Postives = 47/48 (97.92%), Query Frame = 3

Query:    3 KDDLRLPTDDNLLSQIKDGFAEGKDLVVSVMSAMGEEQINALKDIGPK 146
            KDDLRLPTD++LLSQIKDGFA+GKDLVV+VMSAMGEEQI ALKDIGPK
Sbjct:  112 KDDLRLPTDESLLSQIKDGFADGKDLVVTVMSAMGEEQICALKDIGPK 159

[Close]

BLAST of CV190788 vs. TrEMBL
Match: Q3HS00|Q3HS00_SOLTU (Eukaryotic initiation factor 5A4-like protein OS=Solanum tuberosum PE=2 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 2.391e-18
Identity = 47/48 (97.92%), Postives = 48/48 (100.00%), Query Frame = 3

Query:    3 KDDLRLPTDDNLLSQIKDGFAEGKDLVVSVMSAMGEEQINALKDIGPK 146
            KDDLRLPTDD+LLSQIKDGFAEGKDLVVSVMSAMGEEQINALKDIGPK
Sbjct:  112 KDDLRLPTDDSLLSQIKDGFAEGKDLVVSVMSAMGEEQINALKDIGPK 159

[Close]

BLAST of CV190788 vs. TrEMBL
Match: A5B605|A5B605_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_018888 PE=4 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 1.550e-17
Identity = 46/48 (95.83%), Postives = 47/48 (97.92%), Query Frame = 3

Query:    3 KDDLRLPTDDNLLSQIKDGFAEGKDLVVSVMSAMGEEQINALKDIGPK 146
            KDDLRLPTDDNLL+QIKDGFAEGKDLVVSVMSAMGEEQI ALKDIGPK
Sbjct:  112 KDDLRLPTDDNLLTQIKDGFAEGKDLVVSVMSAMGEEQICALKDIGPK 159

[Close]

BLAST of CV190788 vs. TrEMBL
Match: A1Z3W7|A1Z3W7_ROSCH (EIF5A OS=Rosa chinensis PE=2 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 1.550e-17
Identity = 46/48 (95.83%), Postives = 47/48 (97.92%), Query Frame = 3

Query:    3 KDDLRLPTDDNLLSQIKDGFAEGKDLVVSVMSAMGEEQINALKDIGPK 146
            KDDLRLPTDDNLL+QIKDGFAEGKDLVVSVMSAMGEEQI ALKDIGPK
Sbjct:  112 KDDLRLPTDDNLLTQIKDGFAEGKDLVVSVMSAMGEEQICALKDIGPK 159

[Close]

BLAST of CV190788 vs. TrEMBL
Match: Q5YJR7|Q5YJR7_HYAOR (Eukaryotic translation initiation factor 5A-4 OS=Hyacinthus orientalis PE=2 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 2.024e-17
Identity = 44/48 (91.67%), Postives = 48/48 (100.00%), Query Frame = 3

Query:    3 KDDLRLPTDDNLLSQIKDGFAEGKDLVVSVMSAMGEEQINALKDIGPK 146
            KDDLRLPTDD+LL+QIKDGFAEGK+LVVSVMSAMGEEQINALKD+GPK
Sbjct:  112 KDDLRLPTDDSLLTQIKDGFAEGKELVVSVMSAMGEEQINALKDVGPK 159

[Close]

BLAST of CV190788 vs. TrEMBL
Match: B7FHH0|B7FHH0_MEDTR (Putative uncharacterized protein OS=Medicago truncatula PE=2 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 2.024e-17
Identity = 44/48 (91.67%), Postives = 48/48 (100.00%), Query Frame = 3

Query:    3 KDDLRLPTDDNLLSQIKDGFAEGKDLVVSVMSAMGEEQINALKDIGPK 146
            KDDL+LPTDDNLL+QIK+GFAEGKDLVVSVMS+MGEEQINALKDIGPK
Sbjct:  112 KDDLKLPTDDNLLTQIKEGFAEGKDLVVSVMSSMGEEQINALKDIGPK 159

[Close]

BLAST of CV190788 vs. TrEMBL
Match: A5BZP4|A5BZP4_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_014697 PE=4 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 3.453e-17
Identity = 45/48 (93.75%), Postives = 47/48 (97.92%), Query Frame = 3

Query:    3 KDDLRLPTDDNLLSQIKDGFAEGKDLVVSVMSAMGEEQINALKDIGPK 146
            KDDLRLPTDDNLLSQIKDGFA+GKDLVV+VMSAMGEEQI ALKDIGPK
Sbjct:  112 KDDLRLPTDDNLLSQIKDGFADGKDLVVTVMSAMGEEQICALKDIGPK 159

[Close]

BLAST of CV190788 vs. TrEMBL
Match: Q71F50|Q71F50_HEVBR (Eukaryotic translation initiation factor 5A isoform I OS=Hevea brasiliensis GN=eIF-5A PE=2 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 4.510e-17
Identity = 45/48 (93.75%), Postives = 47/48 (97.92%), Query Frame = 3

Query:    3 KDDLRLPTDDNLLSQIKDGFAEGKDLVVSVMSAMGEEQINALKDIGPK 146
            KDDLRLPTD+NLLSQIKDGFAEGKDLVV+VMSAMGEEQI ALKDIGPK
Sbjct:  112 KDDLRLPTDENLLSQIKDGFAEGKDLVVTVMSAMGEEQICALKDIGPK 159

[Close]

BLAST of CV190788 vs. TrEMBL
Match: Q71F49|Q71F49_HEVBR (Eukaryotic translation initiation factor 5A isoform III OS=Hevea brasiliensis GN=eIF-5A PE=2 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 4.510e-17
Identity = 45/48 (93.75%), Postives = 47/48 (97.92%), Query Frame = 3

Query:    3 KDDLRLPTDDNLLSQIKDGFAEGKDLVVSVMSAMGEEQINALKDIGPK 146
            KDDLRLPTD+NLLSQIKDGFAEGKDLVV+VMSAMGEEQI ALKDIGPK
Sbjct:  112 KDDLRLPTDENLLSQIKDGFAEGKDLVVTVMSAMGEEQICALKDIGPK 159

[Close]

BLAST of CV190788 vs. TrEMBL
Match: Q71F48|Q71F48_HEVBR (Eukaryotic translation initiation factor 5A isoform IV OS=Hevea brasiliensis GN=eIF-5A PE=2 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 4.510e-17
Identity = 45/48 (93.75%), Postives = 47/48 (97.92%), Query Frame = 3

Query:    3 KDDLRLPTDDNLLSQIKDGFAEGKDLVVSVMSAMGEEQINALKDIGPK 146
            KDDLRLPTD+NLLSQIKDGFAEGKDLVV+VMSAMGEEQI ALKDIGPK
Sbjct:  112 KDDLRLPTDENLLSQIKDGFAEGKDLVVTVMSAMGEEQICALKDIGPK 159

[Close]

BLAST of CV190788 vs. TrEMBL
Match: Q2QQ48|Q2QQ48_ORYSJ (Eukaryotic translation initiation factor 5A-2, putative, expressed OS=Oryza sativa subsp. japonica GN=Os12g0507200 PE=2 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 4.510e-17
Identity = 45/48 (93.75%), Postives = 46/48 (95.83%), Query Frame = 3

Query:    3 KDDLRLPTDDNLLSQIKDGFAEGKDLVVSVMSAMGEEQINALKDIGPK 146
            KDDLRLPTDDNLLSQIKDGF EGKDLVV+VMSAMGEEQI ALKDIGPK
Sbjct:  113 KDDLRLPTDDNLLSQIKDGFGEGKDLVVTVMSAMGEEQICALKDIGPK 160

[Close]

BLAST of CV190788 vs. Vitis vinifera peptide
Match: GSVIVT01007954001 (assembled CDS)

HSP 1 Score: 92.4337 bits (228), Expect = 7.590e-20
Identity = 46/48 (95.83%), Postives = 47/48 (97.92%), Query Frame = 3

Query:    3 KDDLRLPTDDNLLSQIKDGFAEGKDLVVSVMSAMGEEQINALKDIGPK 146
            KDDLRLPTDDNLL+QIKDGFAEGKDLVVSVMSAMGEEQI ALKDIGPK
Sbjct:  112 KDDLRLPTDDNLLTQIKDGFAEGKDLVVSVMSAMGEEQICALKDIGPK 159

[Close]

BLAST of CV190788 vs. Vitis vinifera peptide
Match: GSVIVT01003867001 (assembled CDS)

HSP 1 Score: 91.2781 bits (225), Expect = 1.691e-19
Identity = 45/48 (93.75%), Postives = 47/48 (97.92%), Query Frame = 3

Query:    3 KDDLRLPTDDNLLSQIKDGFAEGKDLVVSVMSAMGEEQINALKDIGPK 146
            KDDLRLPTDDNLLSQIKDGFA+GKDLVV+VMSAMGEEQI ALKDIGPK
Sbjct:  112 KDDLRLPTDDNLLSQIKDGFADGKDLVVTVMSAMGEEQICALKDIGPK 159

[Close]

BLAST of CV190788 vs. Vitis vinifera peptide
Match: GSVIVT01035958001 (assembled CDS)

HSP 1 Score: 90.1225 bits (222), Expect = 3.767e-19
Identity = 44/48 (91.67%), Postives = 47/48 (97.92%), Query Frame = 3

Query:    3 KDDLRLPTDDNLLSQIKDGFAEGKDLVVSVMSAMGEEQINALKDIGPK 146
            KDDLRLPTDDNLL+QIKDGFAEGKDLVV+VM+AMGEEQI ALKDIGPK
Sbjct:  112 KDDLRLPTDDNLLTQIKDGFAEGKDLVVTVMTAMGEEQICALKDIGPK 159

[Close]

BLAST of CV190788 vs. TAIR peptide
Match: AT1G13950.1 (| Symbols: EIF-5A, ELF5A-1, ATELF5A-1, EIF5A | eukaryotic elongation factor 5A-1 | chr1:4773631-4774668 FORWARD LENGTH=158)

HSP 1 Score: 84.3445 bits (207), Expect = 2.955e-17
Identity = 41/48 (85.42%), Postives = 43/48 (89.58%), Query Frame = 3

Query:    3 KDDLRLPTDDNLLSQIKDGFAEGKDLVVSVMSAMGEEQINALKDIGPK 146
            KDDL+LP DD LL QIK GF +GKDLVVSVMSAMGEEQINALKDIGPK
Sbjct:  111 KDDLKLPNDDTLLQQIKSGFDDGKDLVVSVMSAMGEEQINALKDIGPK 158

[Close]

BLAST of CV190788 vs. TAIR peptide
Match: AT1G69410.1 (| Symbols: ATELF5A-3, ELF5A-3 | eukaryotic elongation factor 5A-3 | chr1:26089301-26090194 FORWARD LENGTH=158)

HSP 1 Score: 78.1814 bits (191), Expect = 2.118e-15
Identity = 36/48 (75.00%), Postives = 45/48 (93.75%), Query Frame = 3

Query:    3 KDDLRLPTDDNLLSQIKDGFAEGKDLVVSVMSAMGEEQINALKDIGPK 146
            KDDL+LPTD+ LL+Q+K+GF EGKD+VVSVMSAMGEEQ+ ALK++GPK
Sbjct:  111 KDDLKLPTDEALLTQLKNGFEEGKDIVVSVMSAMGEEQMCALKEVGPK 158

[Close]

BLAST of CV190788 vs. TAIR peptide
Match: AT1G26630.1 (| Symbols: FBR12, ATELF5A-2, ELF5A-2 | Eukaryotic translation initiation factor 5A-1 (eIF-5A 1) protein | chr1:9205968-9207098 FORWARD LENGTH=159)

HSP 1 Score: 68.9366 bits (167), Expect = 1.285e-12
Identity = 32/46 (69.57%), Postives = 41/46 (89.13%), Query Frame = 3

Query:    3 KDDLRLPTDDNLLSQIKDGFAEGKDLVVSVMSAMGEEQINALKDIG 140
            KDDL+LPTDD L +Q++ GF EGKD+VVSVMS+MGEEQI A+K++G
Sbjct:  111 KDDLKLPTDDGLTAQMRLGFDEGKDIVVSVMSSMGEEQICAVKEVG 156

The following BLAST results are available for this feature:

BLAST of CV190788 vs. DB:swissprot:display
BLAST of CV190788 vs. Populus trichocarpa peptide v2.0
BLAST of CV190788 vs. P. persica 1.0 peptide
BLAST of CV190788 vs. TrEMBL
BLAST of CV190788 vs. Vitis vinifera peptide
BLAST of CV190788 vs. TAIR peptide

BLAST of CV190788 vs. DB:swissprot:display
Analysis Date: 2011-01-18 (BLAST: Vaccinium corymbosum unigene v1 vs Swissprot)
Total hits: 10


Match Name	E-value	Identity	Description
IF5A4_SOLTU	1.413e-19	97.92	Eukaryotic translation initiation factor 5A-4 OS=S...	[more]
IF5A3_SOLLC	7.013e-19	95.83	Eukaryotic translation initiation factor 5A-3 OS=S...	[more]
IF5A2_NICPL	9.159e-19	95.83	Eukaryotic translation initiation factor 5A-2 OS=N...	[more]
IF5A_MANES	7.754e-18	91.67	Eukaryotic translation initiation factor 5A OS=Man...	[more]
IF5A2_MEDSA	1.727e-17	89.58	Eukaryotic translation initiation factor 5A-2 OS=M...	[more]
IF5A2_SOLLC	3.848e-17	85.42	Eukaryotic translation initiation factor 5A-2 OS=S...	[more]
IF5A_SENVE	5.026e-17	89.58	Eukaryotic translation initiation factor 5A OS=Sen...	[more]
IF5A5_SOLTU	6.564e-17	85.42	Eukaryotic translation initiation factor 5A-5 OS=S...	[more]
IF5A1_SOLLC	6.564e-17	85.42	Eukaryotic translation initiation factor 5A-1 OS=S...	[more]
IF5A3_SOLTU	8.573e-17	85.42	Eukaryotic translation initiation factor 5A-3 OS=S...	[more]

BLAST of CV190788 vs. Populus trichocarpa peptide v2.0
Analysis Date: 2011-01-18 (BLAST: Vaccinium corymbosum unigene v1 vs Populus trichocarpa v2.0 peptide)
Total hits: 4


Match Name	E-value	Identity
POPTR_0006s19870.1	1.353e-18	91.67	[more]
POPTR_0008s09150.1	1.496e-17	85.42	[more]
POPTR_0018s11660.1	1.496e-17	87.50	[more]
POPTR_0010s17020.1	2.553e-17	83.33	[more]

BLAST of CV190788 vs. P. persica 1.0 peptide
Analysis Date: 2011-01-18 (BLAST: Vaccinium corymbosum unigene v1 vs Ppersica v1.0 peptide)
Total hits: 2


Match Name	E-value	Identity	Description
ppa012654m	9.723e-19	91.67		[more]
ppa012643m	2.166e-18	89.58		[more]

BLAST of CV190788 vs. TrEMBL
Analysis Date: 2011-01-18 (BLAST: Vaccinium corymbosum unigene v1 vs TrEMBL)
Total hits: 10


Match Name	E-value	Identity	Description
Q3HS00\|Q3HS00_SOLTU	2.391e-18	97.92	Eukaryotic initiation factor 5A4-like protein OS=S...	[more]
A5B605\|A5B605_VITVI	1.550e-17	95.83	Putative uncharacterized protein OS=Vitis vinifera...	[more]
A1Z3W7\|A1Z3W7_ROSCH	1.550e-17	95.83	EIF5A OS=Rosa chinensis PE=2 SV=1	[more]
Q5YJR7\|Q5YJR7_HYAOR	2.024e-17	91.67	Eukaryotic translation initiation factor 5A-4 OS=H...	[more]
B7FHH0\|B7FHH0_MEDTR	2.024e-17	91.67	Putative uncharacterized protein OS=Medicago trunc...	[more]
A5BZP4\|A5BZP4_VITVI	3.453e-17	93.75	Putative uncharacterized protein OS=Vitis vinifera...	[more]
Q71F50\|Q71F50_HEVBR	4.510e-17	93.75	Eukaryotic translation initiation factor 5A isofor...	[more]
Q71F49\|Q71F49_HEVBR	4.510e-17	93.75	Eukaryotic translation initiation factor 5A isofor...	[more]
Q71F48\|Q71F48_HEVBR	4.510e-17	93.75	Eukaryotic translation initiation factor 5A isofor...	[more]
Q2QQ48\|Q2QQ48_ORYSJ	4.510e-17	93.75	Eukaryotic translation initiation factor 5A-2, put...	[more]

BLAST of CV190788 vs. Vitis vinifera peptide
Analysis Date: 2011-01-25 (BLAST: Vaccinium corymbosum unigene v1 vs Vitis vinifera peptide)
Total hits: 3


Match Name	E-value	Identity	Description
GSVIVT01007954001	7.590e-20	95.83	assembled CDS	[more]
GSVIVT01003867001	1.691e-19	93.75	assembled CDS	[more]
GSVIVT01035958001	3.767e-19	91.67	assembled CDS	[more]

BLAST of CV190788 vs. TAIR peptide
Analysis Date: 2011-02-10 (BLAST: Vaccinium corymbosum unigene v1 vs TAIR 10 peptide)
Total hits: 3


Match Name	E-value	Identity	Description
AT1G13950.1	2.955e-17	85.42	\| Symbols: EIF-5A, ELF5A-1, ATELF5A-1, EIF5A \| euk...	[more]
AT1G69410.1	2.118e-15	75.00	\| Symbols: ATELF5A-3, ELF5A-3 \| eukaryotic elongat...	[more]
AT1G26630.1	1.285e-12	69.57	\| Symbols: FBR12, ATELF5A-2, ELF5A-2 \| Eukaryotic ...	[more]

Properties


Property Name	Value
Singlet in analysis	Vaccinium corymbosum unigene v1

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>CV190788 ID=CV190788; Name=CV190788; organism=Vaccinium corymbosum; type=EST; length=451bp
GGAAGGATGACCTCAGGCTTCCAACCGATGACAATCTGCTTTCTCAGATC
AAGGATGGATTTGCCGAAGGAAAAGACCTTGTTGTGTCCGTGATGTCTGC
CATGGGGGAGGAGCAGATCAATGCCCTCAAGGATATTGGCCCCAAGTAAC
TTTCTAAAGTCCTGGGTACTCGATTTCAGAGTGTGATAGACTTAATAGCA
GTTATACGAGGTCTTGAATCTTGTCCGGGGTTGGAGGGAATACCCCATTT
TAACTTTGCTTTTTGACCCATTGGGATTGTTGAAATGGCGTGCCCTCTTT
GTCTAAAGACATAAGTTCTTTTTATTAGGATTTATGACTACATATTCCCT
GTTTGGTTGGACTTGTTGGGGGAATGAATTTGCCAGCAAGACTGTAATGC
ACTTTTCTGCACCTTCAATTGTTGTGAAATTGCAGTTATCAGTTATATTC
T