CV191394 | GDV

EST Overview


Name	CV191394
Unique Name	CV191394
Type	EST
Organism	Vaccinium corymbosum (northern highbush blueberry)
Sequence length	654

Libraries


Library Name	Type
LIBEST_016374 Vco01	cdna_library

Unigenes

This EST is part of the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
	Vaccinium corymbosum unigene v1	EST

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
Vaccinium corymbosum unigene v1	2011-01-18
BLAST: Vaccinium corymbosum unigene v1 vs Ppersica v1.0 peptide	2011-01-18
BLAST: Vaccinium corymbosum unigene v1 vs Swissprot	2011-01-18
BLAST: Vaccinium corymbosum unigene v1 vs Populus trichocarpa v2.0 peptide	2011-01-18
BLAST: Vaccinium corymbosum unigene v1 vs TrEMBL	2011-01-18
BLAST: Vaccinium corymbosum unigene v1 vs Vitis vinifera peptide	2011-01-25
BLAST: Vaccinium corymbosum unigene v1 vs TAIR 10 peptide	2011-02-10
InterProScan analysis for Vaccinium corymbosum unigene v1	2011-01-18

Homology

[Close]

BLAST of CV191394 vs. DB:swissprot:display
Match: SNRPA_PIG (U1 small nuclear ribonucleoprotein A OS=Sus scrofa GN=SNRPA PE=2 SV=1)

HSP 1 Score: 199.134 bits (505), Expect = 1.655e-50
Identity = 115/258 (44.57%), Postives = 157/258 (60.85%), Query Frame = 2

Query:    5 YINNLNEKIKLEELKQTLFAVFSQFGKILEVLAFKTLKSKGQAWVVFEDASSASSAIRQMQGFPFHDKPLRIQYAKTKSDIIAKADGTFVPRER-RKRHEDKGRKRKDQQDANQAGMAL------------NXXXXXXXXXXXHL-SQIPYM----------------------------GGAKSAVPEAPAPPNNILFVQNLPHQTIPMMLQVLFCQYPGFKEVRMVEAKPGIAFVEYENEMQSHYAMQGLQGFKIS 652
            YINNLNEKIK +ELK++L+A+FSQFG+IL++L  ++LK +GQA+V+F++ SSA++A+R MQGFPF+DKP+RIQYAKT SDIIAK  GTFV R+R R++ + K ++    + A Q G A                         H+  Q PYM                            G    A P +  PPN+ILF+ NLP +T  +ML +LF Q+PGFKEVR+V  +  IAFVE++NE+Q+  A   LQGFKI+
Sbjct:   13 YINNLNEKIKKDELKKSLYAIFSQFGQILDILVSRSLKMRGQAFVIFKEVSSATNALRSMQGFPFYDKPMRIQYAKTDSDIIAKMKGTFVERDRKREKRKPKSQETPASKKAVQGGAAAPVVGAVQGPVPGMPPMTQTPRIMHHMPGQPPYMPPPGMIPPPGLAPGQIPPGAMPPQQLMPGQMPPAQPLSENPPNHILFLTNLPEETNELMLSMLFNQFPGFKEVRLVPGRHDIAFVEFDNEVQAGAARDALQGFKIT 270

[Close]

BLAST of CV191394 vs. DB:swissprot:display
Match: SNRPA_BOVIN (U1 small nuclear ribonucleoprotein A OS=Bos taurus GN=SNRPA PE=2 SV=1)

HSP 1 Score: 198.749 bits (504), Expect = 2.162e-50
Identity = 115/258 (44.57%), Postives = 157/258 (60.85%), Query Frame = 2

Query:    5 YINNLNEKIKLEELKQTLFAVFSQFGKILEVLAFKTLKSKGQAWVVFEDASSASSAIRQMQGFPFHDKPLRIQYAKTKSDIIAKADGTFVPRER-RKRHEDKGRKRKDQQDANQAGMAL------------NXXXXXXXXXXXHL-SQIPYM----------------------------GGAKSAVPEAPAPPNNILFVQNLPHQTIPMMLQVLFCQYPGFKEVRMVEAKPGIAFVEYENEMQSHYAMQGLQGFKIS 652
            YINNLNEKIK +ELK++L+A+FSQFG+IL++L  ++LK +GQA+V+F++ SSA++A+R MQGFPF+DKP+RIQYAKT SDIIAK  GTFV R+R R++ + K ++    + A Q G A                         H+  Q PYM                            G    A P +  PPN+ILF+ NLP +T  +ML +LF Q+PGFKEVR+V  +  IAFVE++NE+Q+  A   LQGFKI+
Sbjct:   13 YINNLNEKIKKDELKKSLYAIFSQFGQILDILVSRSLKMRGQAFVIFKEVSSATNALRSMQGFPFYDKPMRIQYAKTDSDIIAKMKGTFVERDRKREKRKPKSQETPAAKKAVQGGAAAPVVGTVQGPVPGMPPMTQAPRIMHHMPGQPPYMPPPGMIPPPGLAPGQLPPGAMPPQQLMPGQMPPAQPLSENPPNHILFLTNLPEETNELMLSMLFNQFPGFKEVRLVPGRHDIAFVEFDNEVQAGAARDALQGFKIT 270

[Close]

BLAST of CV191394 vs. DB:swissprot:display
Match: SNRPA_HUMAN (U1 small nuclear ribonucleoprotein A OS=Homo sapiens GN=SNRPA PE=1 SV=3)

HSP 1 Score: 197.978 bits (502), Expect = 3.688e-50
Identity = 115/258 (44.57%), Postives = 157/258 (60.85%), Query Frame = 2

Query:    5 YINNLNEKIKLEELKQTLFAVFSQFGKILEVLAFKTLKSKGQAWVVFEDASSASSAIRQMQGFPFHDKPLRIQYAKTKSDIIAKADGTFVPRER-RKRHEDKGRKRKDQQDANQAGMAL------------NXXXXXXXXXXXHL-SQIPYM----------------------------GGAKSAVPEAPAPPNNILFVQNLPHQTIPMMLQVLFCQYPGFKEVRMVEAKPGIAFVEYENEMQSHYAMQGLQGFKIS 652
            YINNLNEKIK +ELK++L+A+FSQFG+IL++L  ++LK +GQA+V+F++ SSA++A+R MQGFPF+DKP+RIQYAKT SDIIAK  GTFV R+R R++ + K ++    + A Q G A                         H+  Q PYM                            G    A P +  PPN+ILF+ NLP +T  +ML +LF Q+PGFKEVR+V  +  IAFVE++NE+Q+  A   LQGFKI+
Sbjct:   13 YINNLNEKIKKDELKKSLYAIFSQFGQILDILVSRSLKMRGQAFVIFKEVSSATNALRSMQGFPFYDKPMRIQYAKTDSDIIAKMKGTFVERDRKREKRKPKSQETPATKKAVQGGGATPVVGAVQGPVPGMPPMTQAPRIMHHMPGQPPYMPPPGMIPPPGLAPGQIPPGAMPPQQLMPGQMPPAQPLSENPPNHILFLTNLPEETNELMLSMLFNQFPGFKEVRLVPGRHDIAFVEFDNEVQAGAARDALQGFKIT 270

[Close]

BLAST of CV191394 vs. DB:swissprot:display
Match: RU2B_MOUSE (U2 small nuclear ribonucleoprotein B'' OS=Mus musculus GN=Snrpb2 PE=2 SV=1)

HSP 1 Score: 197.593 bits (501), Expect = 4.817e-50
Identity = 103/217 (47.47%), Postives = 147/217 (67.74%), Query Frame = 2

Query:    5 YINNLNEKIKLEELKQTLFAVFSQFGKILEVLAFKTLKSKGQAWVVFEDASSASSAIRQMQGFPFHDKPLRIQYAKTKSDIIAKADGTFVPRERRKRHEDKGRKRKDQQDANQAGMALNXXXXXXXXXXXHLSQIPYMGGAKSAVPEAP-APPNNILFVQNLPHQTIPMMLQVLFCQYPGFKEVRMVEAKPGIAFVEYENEMQSHYAMQGLQGFKIS 652
            YINN+N+KIK EELK++L+A+FSQFG +++++A KT+K +GQA+V+F++  S+++A+RQ+QGFPF+ KP+RIQYAKT SDII+K  GTF  +E++K       ++K  +   QA  A N           +        G  +  P+ P  PPN ILF+ NLP +T  MML +LF Q+PGFKEVR+V  +  IAFVE+EN+ Q+  A   LQGFKI+
Sbjct:   10 YINNMNDKIKKEELKRSLYALFSQFGHVVDIVALKTMKMRGQAFVIFKELGSSTNALRQLQGFPFYGKPMRIQYAKTDSDIISKMRGTFADKEKKK-------EKKKAKTMEQAAAAANKKPGQGTPNAANTQ------GTAAPNPQVPDYPPNYILFLNNLPEETNEMMLSMLFNQFPGFKEVRLVPGRHDIAFVEFENDGQAGAARDALQGFKIT 213

[Close]

BLAST of CV191394 vs. DB:swissprot:display
Match: SNRPA_XENLA (U1 small nuclear ribonucleoprotein A OS=Xenopus laevis GN=snrpa PE=2 SV=1)

HSP 1 Score: 196.823 bits (499), Expect = 8.216e-50
Identity = 116/259 (44.79%), Postives = 157/259 (60.62%), Query Frame = 2

Query:    5 YINNLNEKIKLEELKQTLFAVFSQFGKILEVLAFKTLKSKGQAWVVFEDASSASSAIRQMQGFPFHDKPLRIQYAKTKSDIIAKADGTFVPRERRKRHEDKGRKRKDQQDANQA--GMAL------------NXXXXXXXXXXXHLS-QIPYM----------------------------GGAKSAVPEAPAPPNNILFVQNLPHQTIPMMLQVLFCQYPGFKEVRMVEAKPGIAFVEYENEMQSHYAMQGLQGFKIS 652
            YINNLNEKIK +ELK++L+A+FSQFG+IL++L  + LK +GQA+V+F++ SSA++A+R MQGFPF+DKP+RIQY+KT SDIIAK  GTFV R+ RKR E +  K  + Q    A  G AL            +           H++ Q PYM                            G      P +  PPN+ILF+ NLP +T  +ML +LF Q+PGFKEVR+V  +  IAFVE++NE+Q+  A + LQGFKI+
Sbjct:   13 YINNLNEKIKKDELKKSLYAIFSQFGQILDILVSRNLKMRGQAFVIFKETSSATNALRSMQGFPFYDKPMRIQYSKTDSDIIAKMKGTFVERD-RKRQEKRKVKVPEVQGVKNAMPGAALLPGVPGQMAAMQDMPGMTQAPRMMHMAGQAPYMHHPGMMPPPGMAPGQMPPGGMPHGQLMPGQMAPMQPISENPPNHILFLTNLPEETNELMLSMLFNQFPGFKEVRLVPGRHDIAFVEFDNEVQAGAARESLQGFKIT 270

[Close]

BLAST of CV191394 vs. DB:swissprot:display
Match: SNRPA_MOUSE (U1 small nuclear ribonucleoprotein A OS=Mus musculus GN=Snrpa PE=2 SV=3)

HSP 1 Score: 195.282 bits (495), Expect = 2.390e-49
Identity = 112/257 (43.58%), Postives = 156/257 (60.70%), Query Frame = 2

Query:    5 YINNLNEKIKLEELKQTLFAVFSQFGKILEVLAFKTLKSKGQAWVVFEDASSASSAIRQMQGFPFHDKPLRIQYAKTKSDIIAKADGTFVPRER-RKRHEDKGRKRKDQQDANQAGMAL-----------NXXXXXXXXXXXHL-SQIPYM----------------------------GGAKSAVPEAPAPPNNILFVQNLPHQTIPMMLQVLFCQYPGFKEVRMVEAKPGIAFVEYENEMQSHYAMQGLQGFKIS 652
            YINNLNEKIK +ELK++L+A+FSQFG+IL++L  + +K +GQA+V+F++ +SA++A+R MQGFPF+DKP+RIQYAKT SDIIAK  GT+V R+R R++ + K ++    + A Q G A                        H+  Q PYM                            G    A P +  PPN+ILF+ NLP +T  +ML +LF Q+PGFKEVR+V  +  IAFVE++NE+Q+  A   LQGFKI+
Sbjct:   19 YINNLNEKIKKDELKKSLYAIFSQFGQILDILVSRIMKMRGQAFVIFKEVTSATNALRSMQGFPFYDKPMRIQYAKTDSDIIAKMKGTYVERDRKREKRKPKSQETPAAKKAVQGGAAAPVVGAVQPVPGMPPMPQAPRIMHHMPGQPPYMPPPGMIPPPGLAPGQIPPGAMPPQQLMPGQMPPAQPLSENPPNHILFLTNLPEETNELMLSMLFNQFPGFKEVRLVPGRHDIAFVEFDNEVQAGAARDALQGFKIT 275

[Close]

BLAST of CV191394 vs. DB:swissprot:display
Match: RU2B_HUMAN (U2 small nuclear ribonucleoprotein B'' OS=Homo sapiens GN=SNRPB2 PE=1 SV=1)

HSP 1 Score: 194.512 bits (493), Expect = 4.077e-49
Identity = 101/217 (46.54%), Postives = 145/217 (66.82%), Query Frame = 2

Query:    5 YINNLNEKIKLEELKQTLFAVFSQFGKILEVLAFKTLKSKGQAWVVFEDASSASSAIRQMQGFPFHDKPLRIQYAKTKSDIIAKADGTFVPRERRKRHEDKGRKRKDQQDANQAGMALNXXXXXXXXXXXHLSQIPYMGGAKSAVPEAP-APPNNILFVQNLPHQTIPMMLQVLFCQYPGFKEVRMVEAKPGIAFVEYENEMQSHYAMQGLQGFKIS 652
            YINN+N+KIK EELK++L+A+FSQFG +++++A KT+K +GQA+V+F++  S+++A+RQ+QGFPF+ KP+RIQYAKT SDII+K  GTF  +E++K       ++K  +   Q     N           +        G  +  P+ P  PPN ILF+ NLP +T  MML +LF Q+PGFKEVR+V  +  IAFVE+EN+ Q+  A   LQGFKI+
Sbjct:   10 YINNMNDKIKKEELKRSLYALFSQFGHVVDIVALKTMKMRGQAFVIFKELGSSTNALRQLQGFPFYGKPMRIQYAKTDSDIISKMRGTFADKEKKK-------EKKKAKTVEQTATTTNKKPGQGTPNSANTQ------GNSTPNPQVPDYPPNYILFLNNLPEETNEMMLSMLFNQFPGFKEVRLVPGRHDIAFVEFENDGQAGAARDALQGFKIT 213

[Close]

BLAST of CV191394 vs. DB:swissprot:display
Match: SNRPA_DROME (U1 small nuclear ribonucleoprotein A OS=Drosophila melanogaster GN=snf PE=1 SV=1)

HSP 1 Score: 192.586 bits (488), Expect = 1.549e-48
Identity = 102/218 (46.79%), Postives = 145/218 (66.51%), Query Frame = 2

Query:    5 YINNLNEKIKLEELKQTLFAVFSQFGKILEVLAFKTLKSKGQAWVVFEDASSASSAIRQMQGFPFHDKPLRIQYAKTKSDIIAKADGTFVPRERRKRHEDKGRKRKDQQDANQAGMALNXXXXXXXXXXXHLSQIPYMGGAKSAVPEAPA--PPNNILFVQNLPHQTIPMMLQVLFCQYPGFKEVRMVEAKPGIAFVEYENEMQSHYAMQGLQGFKIS 652
            YINNLNEKIK EELK++L+A+FSQFG+IL+++A KTLK +GQA+V+F++  SAS+A+R MQGFPF+DKP++I Y+K+ SDI+AK  GTF  R ++ +         +++D  +   +                       A+++ P A    PPN ILF+ NLP +T  MML +LF Q+PGFKEVR+V  +  IAFVE+  E+QS+ A + LQGFKI+
Sbjct:   10 YINNLNEKIKKEELKKSLYAIFSQFGQILDIVALKTLKMRGQAFVIFKEIGSASNALRTMQGFPFYDKPMQIAYSKSDSDIVAKIKGTFKERPKKVKPPKPAPGTDEKKDKKKKPSS-----------------------AENSNPNAQTEQPPNQILFLTNLPEETNEMMLSMLFNQFPGFKEVRLVPNRHDIAFVEFTTELQSNAAKEALQGFKIT 204

[Close]

BLAST of CV191394 vs. DB:swissprot:display
Match: RU2B_DICDI (U2 small nuclear ribonucleoprotein B'' OS=Dictyostelium discoideum GN=snrpb2 PE=3 SV=1)

HSP 1 Score: 182.956 bits (463), Expect = 1.228e-45
Identity = 92/216 (42.59%), Postives = 138/216 (63.89%), Query Frame = 2

Query:    5 YINNLNEKIKLEELKQTLFAVFSQFGKILEVLAFKTLKSKGQAWVVFEDASSASSAIRQMQGFPFHDKPLRIQYAKTKSDIIAKADGTFVPRERRKRHEDKGRKRKDQQDANQAGMALNXXXXXXXXXXXHLSQIPYMGGAKSAVPEAPAPPNNILFVQNLPHQTIPMMLQVLFCQYPGFKEVRMVEAKPGIAFVEYENEMQSHYAMQGLQGFKIS 652
            Y+NNL EKI  ++L + L  +FS++G ILE++  K+LK +GQA++VF+D +SAS+A+R+M GF F D+P++IQY K+KSD ++K DGT++ ++R +   DK    K +QD    G                 +  P       ++     PPN  LFV+NLP +   MML +LF Q+ GFKEV MVE+K GIAF+E+E+E++S +AM  LQ FK++
Sbjct:   15 YVNNLYEKISKKKLIEQLLLLFSKYGPILEIVGSKSLKMRGQAFIVFKDITSASNALREMNGFNFLDRPMKIQYCKSKSDAVSKLDGTYMEKKREREENDKKGSNK-KQDRKSTGQQQQQQKRPGAPTSTTSTTSPTTSNGTVSLQPRDDPPNKTLFVENLPDKCDSMMLSMLFSQFQGFKEVHMVESKKGIAFIEFEDEIKSGFAMTNLQHFKVT 229

[Close]

BLAST of CV191394 vs. DB:swissprot:display
Match: RU1A_SCHPO (U1 small nuclear ribonucleoprotein usp102 OS=Schizosaccharomyces pombe GN=usp102 PE=1 SV=1)

HSP 1 Score: 144.05 bits (362), Expect = 6.320e-34
Identity = 83/219 (37.90%), Postives = 130/219 (59.36%), Query Frame = 2

Query:    5 YINNLNEKIKLEELKQTLFAVFSQFGKILEVLAFKTLKSKGQAWVVFEDASSASSAIRQMQGFPFHDKPLRIQYAKTKSDIIAKADGTFVPRERRKRHEDKGRKRKDQQDANQAGMALNXXXXXXXXXXXHLSQIPYMG-GA--KSAVPEAPAPPNNILFVQNLPHQTIPMMLQVLFCQYPGFKEVRMVEAKPGIAFVEYENEMQSHYAMQGLQGFKIS 652
            YI N+ EKI+L  LK+ L  +F  +GK+++V A KTL+ +GQA+VVF++  +AS A++ +QG+P + KP+ IQY+K+KSDII       V RE  +  E + + RK++++  +   AL            H   +P    GA  KS + E   PPN +L +QN+P +    +L  +F  + GF+EVRMV  + GIAFVEY+++ ++  A  G  G  +S
Sbjct:   29 YIRNIEEKIRLTMLKRILEHLFGSYGKVIDVQARKTLRMRGQAFVVFDNLENASRALKDLQGYPLYGKPMMIQYSKSKSDII-------VQRESPEEIETRKKDRKNRREMLKRTSALQ----PAAPKPTHKKPVPKRNVGAERKSTINEDLLPPNKVLLLQNIPQEVNADVLTQIFEAFSGFQEVRMVPGRRGIAFVEYDSDREATVAKNGTTGMSLS 236

[Close]

BLAST of CV191394 vs. Populus trichocarpa peptide v2.0
Match: POPTR_0014s12260.1 ()

HSP 1 Score: 332.798 bits (852), Expect = 1.113e-91
Identity = 164/215 (76.28%), Postives = 183/215 (85.12%), Query Frame = 2

Query:    5 YINNLNEKIKLEELKQTLFAVFSQFGKILEVLAFKTLKSKGQAWVVFEDASSASSAIRQMQGFPFHDKPLRIQYAKTKSDIIAKADGTFVPRERRKRHEDKGRKRKDQQDANQAGMALNXXXXXXXXXXXHLSQIPYMGGAKSAVPEAPAPPNNILFVQNLPHQTIPMMLQVLFCQYPGFKEVRMVEAKPGIAFVEYENEMQSHYAMQGLQGFKI 649
            YINNLNEKIK++ELK +L AVFSQFGKILE+LAFKTLK KGQAWV+FED  SAS+AIRQMQ FPF+DKP+RIQYAKTKSDIIAKADGTFVPRE+R+RHE+KG+K+KDQ DANQ G+ L             L QIPY GG KS VPEAPAPPNNILF+QNLP++T PMMLQ+LF QYPGFKEVRMVEAKPGIAFVEY +EMQS  AM GLQGFKI
Sbjct:   27 YINNLNEKIKIDELKTSLHAVFSQFGKILEILAFKTLKHKGQAWVIFEDVQSASNAIRQMQSFPFYDKPMRIQYAKTKSDIIAKADGTFVPREKRRRHEEKGKKKKDQHDANQVGVGLTPAYGGAYGTTPSLLQIPYPGGVKSMVPEAPAPPNNILFIQNLPNETTPMMLQMLFQQYPGFKEVRMVEAKPGIAFVEYGDEMQSTGAMHGLQGFKI 241

[Close]

BLAST of CV191394 vs. Populus trichocarpa peptide v2.0
Match: POPTR_0019s14440.1 ()

HSP 1 Score: 240.736 bits (613), Expect = 5.756e-64
Identity = 120/217 (55.30%), Postives = 164/217 (75.58%), Query Frame = 2

Query:    5 YINNLNEKIKLEELKQTLFAVFSQFGKILEVLAFKTLKSKGQAWVVFEDASSASSAIRQMQGFPFHDKPLRIQYAKTKSDIIAKADGTFVPR-ERRKRHEDKGRKRKDQQDANQAGMALNXXXXXXXXXXXHLSQIPYMGGAKSAVPEAPAPPNNILFVQNLPHQTIPMMLQVLFCQYPGFKEVRMVEAKPGIAFVEYENEMQSHYAMQGLQGFKIS 652
            YI NLNEK+K EELK++L+ +FSQ+G+IL+V+A KT + +GQAWVVF + ++AS+A+RQMQGFPF+DKP+RIQYAKTKSD IA+A+G + P  +++K+ E+K  ++K  ++A Q+  A             +     +  G +SA  +   PPNNILF+QNLPH+T  MMLQVLF QYPGF+EVRM+EAKPGIAFVE+E+++QS  AMQ LQGFKI+
Sbjct:   55 YIKNLNEKVKKEELKRSLYCLFSQYGRILDVVALKTARLRGQAWVVFSEVTAASNAVRQMQGFPFYDKPMRIQYAKTKSDCIAEAEGVYDPNAKKKKKQEEKAERKKRAEEAQQSAPA------NGKPAESNGGPTSFRQGNQSA--QETVPPNNILFIQNLPHETTSMMLQVLFQQYPGFREVRMIEAKPGIAFVEFEDDVQSSMAMQALQGFKIT 263

[Close]

BLAST of CV191394 vs. Populus trichocarpa peptide v2.0
Match: POPTR_0013s14980.1 ()

HSP 1 Score: 236.113 bits (601), Expect = 1.418e-62
Identity = 116/216 (53.70%), Postives = 158/216 (73.15%), Query Frame = 2

Query:    5 YINNLNEKIKLEELKQTLFAVFSQFGKILEVLAFKTLKSKGQAWVVFEDASSASSAIRQMQGFPFHDKPLRIQYAKTKSDIIAKADGTFVPRERRKRHEDKGRKRKDQQDANQAGMALNXXXXXXXXXXXHLSQIPYMGGAKSAVPEAPAPPNNILFVQNLPHQTIPMMLQVLFCQYPGFKEVRMVEAKPGIAFVEYENEMQSHYAMQGLQGFKIS 652
            Y+ NLNEK+K EELK++L+ +FSQ+G+IL+V+A KT K +GQAWVVF + ++AS+A+RQMQGFPF+DKP+RIQYAKT SD I +A+G + P  ++K+  ++  +RK + + +Q     N                 +  G + A  +  APPNNILF+QNLPH+T  MMLQVLF QYPGF+EVRM+EAKPGIAFVE+E+++QS  AMQ LQGFKI+
Sbjct:   13 YVKNLNEKVKKEELKRSLYCLFSQYGRILDVVALKTAKLRGQAWVVFSEVTAASNAVRQMQGFPFYDKPMRIQYAKTMSDCITEAEGVYDPNAKKKKKNEEKAERKRRAEESQQSAPANGKPAESNG-----GPTSFRHGNQGA--QETAPPNNILFIQNLPHETTSMMLQVLFQQYPGFREVRMIEAKPGIAFVEFEDDVQSSMAMQALQGFKIT 221

[Close]

BLAST of CV191394 vs. Populus trichocarpa peptide v2.0
Match: POPTR_0013s14980.2 ()

HSP 1 Score: 219.55 bits (558), Expect = 1.373e-57
Identity = 111/216 (51.39%), Postives = 152/216 (70.37%), Query Frame = 2

Query:    5 YINNLNEKIKLEELKQTLFAVFSQFGKILEVLAFKTLKSKGQAWVVFEDASSASSAIRQMQGFPFHDKPLRIQYAKTKSDIIAKADGTFVPRERRKRHEDKGRKRKDQQDANQAGMALNXXXXXXXXXXXHLSQIPYMGGAKSAVPEAPAPPNNILFVQNLPHQTIPMMLQVLFCQYPGFKEVRMVEAKPGIAFVEYENEMQSHYAMQGLQGFKIS 652
            Y+ NLNEK       ++L+ +FSQ+G+IL+V+A KT K +GQAWVVF + ++AS+A+RQMQGFPF+DKP+RIQYAKT SD I +A+G + P  ++K+  ++  +RK + + +Q     N                 +  G + A  +  APPNNILF+QNLPH+T  MMLQVLF QYPGF+EVRM+EAKPGIAFVE+E+++QS  AMQ LQGFKI+
Sbjct:   13 YVKNLNEK-------RSLYCLFSQYGRILDVVALKTAKLRGQAWVVFSEVTAASNAVRQMQGFPFYDKPMRIQYAKTMSDCITEAEGVYDPNAKKKKKNEEKAERKRRAEESQQSAPANGKPAESNG-----GPTSFRHGNQGA--QETAPPNNILFIQNLPHETTSMMLQVLFQQYPGFREVRMIEAKPGIAFVEFEDDVQSSMAMQALQGFKIT 214

[Close]

BLAST of CV191394 vs. Populus trichocarpa peptide v2.0
Match: POPTR_0002s20490.1 ()

HSP 1 Score: 152.525 bits (384), Expect = 2.061e-37
Identity = 75/114 (65.79%), Postives = 85/114 (74.56%), Query Frame = 2

Query:  308 GRKRKDQQDANQAGMALNXXXXXXXXXXXHLSQIPYMGGAKSAVPEAPAPPNNILFVQNLPHQTIPMMLQVLFCQYPGFKEVRMVEAKPGIAFVEYENEMQSHYAMQGLQGFKI 649
            G+K+KDQ D NQ G+ L             LSQIPY+GG KS VPEAPAPPNNILF+QNLP++T  MMLQ+LF QY GFKEVRMVE KPGIAFVEY +EMQS  AM  LQGFK+
Sbjct:  115 GKKKKDQHDTNQVGVGLTPAYGGAYGTTPPLSQIPYLGGVKSMVPEAPAPPNNILFIQNLPNETTTMMLQMLFQQYAGFKEVRMVETKPGIAFVEYGDEMQSTVAMHALQGFKL 228

[Close]

BLAST of CV191394 vs. Populus trichocarpa peptide v2.0
Match: POPTR_0363s00200.1 ()

HSP 1 Score: 150.214 bits (378), Expect = 1.023e-36
Identity = 74/113 (65.49%), Postives = 84/113 (74.34%), Query Frame = 2

Query:  311 RKRKDQQDANQAGMALNXXXXXXXXXXXHLSQIPYMGGAKSAVPEAPAPPNNILFVQNLPHQTIPMMLQVLFCQYPGFKEVRMVEAKPGIAFVEYENEMQSHYAMQGLQGFKI 649
            +K+KDQ D NQ G+ L             LSQIPY+GG KS VPEAPAPPNNILF+QNLP++T  MMLQ+LF QY GFKEVRMVE KPGIAFVEY +EMQS  AM  LQGFK+
Sbjct:    1 KKKKDQHDTNQVGVGLTPAYGGAYGTTPPLSQIPYLGGVKSMVPEAPAPPNNILFIQNLPNETTTMMLQMLFQQYAGFKEVRMVETKPGIAFVEYGDEMQSTVAMHALQGFKL 113

[Close]

BLAST of CV191394 vs. P. persica 1.0 peptide
Match: ppa010847m ()

HSP 1 Score: 225.328 bits (573), Expect = 1.769e-59
Identity = 116/220 (52.73%), Postives = 156/220 (70.91%), Query Frame = 2

Query:    5 YINNLNEKIKLEELKQTLFAVFSQFGKILEVLAFKTLKSKGQAWVVFEDASSASSAIRQMQGFPFHDKPLRIQYAKTKSDIIAKADGTFVPRERRKRHEDKGRKRK----DQQDANQAGMALNXXXXXXXXXXXHLSQIPYMGGAKSAVPEAPAPPNNILFVQNLPHQTIPMMLQVLFCQYPGFKEVRMVEAKPGIAFVEYENEMQSHYAMQGLQGFKIS 652
            YI NLNEKIK EELK++L+ +FSQ+GKIL+V+A KT K +GQAWV F + +SAS+A+RQMQ FPF+DKP+RIQYAKTKSD IA ADG+  P+E++K+ +DK  ++K     QQ A + G                 +Q     G  +A     A PN+ILF++NLPH+T   ML++LF QYPGF+EVR++EAKPGIAFVE+E+++ S  AM  LQGF+I+
Sbjct:   13 YIKNLNEKIKKEELKRSLYCLFSQYGKILDVVALKTPKLRGQAWVAFLEVTSASNAVRQMQNFPFYDKPMRIQYAKTKSDCIADADGSLGPKEKKKKQDDKAERKKRGDEGQQSATENGATAENGGR---------TQASSRQGNPNA--HEAAAPNSILFIENLPHETTSAMLELLFKQYPGFREVRLIEAKPGIAFVEFEDDIHSSMAMTALQGFRIT 221

[Close]

BLAST of CV191394 vs. P. persica 1.0 peptide
Match: ppa010876m ()

HSP 1 Score: 224.942 bits (572), Expect = 2.310e-59
Identity = 115/222 (51.80%), Postives = 155/222 (69.82%), Query Frame = 2

Query:    5 YINNLNEKIKLEELKQTLFAVFSQFGKILEVLAFKTLKSKGQAWVVFEDASSASSAIRQMQGFPFHDKPLRIQYAKTKSDIIAKADGTFVPRERRKRHEDKGRKRK----DQQDANQAGMALNXXXXXXXXXXXHLSQIPYMGGAKSAVPEA--PAPPNNILFVQNLPHQTIPMMLQVLFCQYPGFKEVRMVEAKPGIAFVEYENEMQSHYAMQGLQGFKIS 652
            YI NLNEKIK EELK++L+ +FSQ+GKIL+V+A KT K +GQAWV F + +SAS+A+RQMQ FPF+DKP+RIQYAKTKSD IA ADG+  P+E++K+ +DK  ++K     QQ A + G                         ++   P A   A PN+ILF++NLPH+T   ML++LF QYPGF+EVR++EAKPGIAFVE+E+++ S  AM  LQGF+I+
Sbjct:   13 YIKNLNEKIKKEELKRSLYCLFSQYGKILDVVALKTPKLRGQAWVAFLEVTSASNAVRQMQNFPFYDKPMRIQYAKTKSDCIADADGSLGPKEKKKKQDDKAERKKRGDEGQQSATENGATAENGGR--------------TASSRQGNPNAHEAAAPNSILFIENLPHETTSAMLELLFKQYPGFREVRLIEAKPGIAFVEFEDDIHSSMAMTALQGFRIT 220

[Close]

BLAST of CV191394 vs. P. persica 1.0 peptide
Match: ppa000711m ()

HSP 1 Score: 82.4185 bits (202), Expect = 1.867e-16
Identity = 39/53 (73.58%), Postives = 43/53 (81.13%), Query Frame = -1

Query:  496 GDILKPWSPCMA*WDCISFSYSTKAIPGFASTILTSLKPGYWQKSTCSIIGMV 654
            G ILKPWS C+A  DCIS   STKAIPGF STILTSLKP YWQKS C+I+G+V
Sbjct:  973 GVILKPWSACIATVDCISSPNSTKAIPGFVSTILTSLKPAYWQKSICNIMGVV 1025

[Close]

BLAST of CV191394 vs. TrEMBL
Match: Q41498|Q41498_SOLTU (U1snRNP-specific protein, U1A OS=Solanum tuberosum GN=U1A PE=2 SV=1)

HSP 1 Score: 357.066 bits (915), Expect = 6.911e-97
Identity = 173/216 (80.09%), Postives = 194/216 (89.81%), Query Frame = 2

Query:    5 YINNLNEKIKLEELKQTLFAVFSQFGKILEVLAFKTLKSKGQAWVVFEDASSASSAIRQMQGFPFHDKPLRIQYAKTKSDIIAKADGTFVPRERRKRHEDKGRKRKDQQDANQAGMALNXXXXXXXXXXXHLSQIPYMGGAKSAVPEAPAPPNNILFVQNLPHQTIPMMLQVLFCQYPGFKEVRMVEAKPGIAFVEYENEMQSHYAMQGLQGFKIS 652
            YINNLNEKIKLEELK+++ AVFSQFGKILEVLAFKTLK KGQAWVVFE+ SSAS+A+RQMQGFPF+DKP+RIQYAKTKSD++AKADGTFVPRE+RKRHEDKGRK+KDQQD+NQAGM LN             SQIPYMGGAK+AVPEAPAPPN+ILFVQNLPHQ+ PMMLQ+LFCQYPGFKEVRM+EAKPGIAF+EY +EMQS  AMQ LQGFKI+
Sbjct:   26 YINNLNEKIKLEELKKSMHAVFSQFGKILEVLAFKTLKHKGQAWVVFEEVSSASNALRQMQGFPFYDKPMRIQYAKTKSDVVAKADGTFVPREKRKRHEDKGRKKKDQQDSNQAGMGLNPAYAGAYGAAPPFSQIPYMGGAKAAVPEAPAPPNSILFVQNLPHQSTPMMLQMLFCQYPGFKEVRMIEAKPGIAFIEYGDEMQSTVAMQALQGFKIT 241

[Close]

BLAST of CV191394 vs. TrEMBL
Match: D7U2B0|D7U2B0_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_5.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00028031001 PE=4 SV=1)

HSP 1 Score: 347.821 bits (891), Expect = 4.193e-94
Identity = 170/217 (78.34%), Postives = 193/217 (88.94%), Query Frame = 2

Query:    5 YINNLNEKIKLEELKQTLFAVFSQFGKILEVLAFKTLKSKGQAWVVFEDASSASSAIRQMQGFPFHDKPLRIQYAKTKSDIIAKADGTFVPRERRKRHEDK-GRKRKDQQDANQAGMALNXXXXXXXXXXXHLSQIPYMGGAKSAVPEAPAPPNNILFVQNLPHQTIPMMLQVLFCQYPGFKEVRMVEAKPGIAFVEYENEMQSHYAMQGLQGFKIS 652
            YINNLNEKIKLEELK++LFAVFSQFGKI+EVLAFKTLK KGQAWVVFE+ SSA++A+RQMQGFPF+DKP+RIQYAKTKSD+IAKADGTFVPRERR+RH+D+ GRKR++Q DANQAG+ +N            LSQIPY+GGAKSAVPEAPAPPNNILF+QNLPH+  PMMLQ+ FCQYPGFKEVRMVEAKPGIAFVEY +EMQS  AMQGLQG KI+
Sbjct:    4 YINNLNEKIKLEELKKSLFAVFSQFGKIMEVLAFKTLKHKGQAWVVFEEVSSATNALRQMQGFPFYDKPMRIQYAKTKSDVIAKADGTFVPRERRRRHDDRAGRKRREQHDANQAGVGVNPAYGGAYGAAPPLSQIPYLGGAKSAVPEAPAPPNNILFIQNLPHEATPMMLQMFFCQYPGFKEVRMVEAKPGIAFVEYGDEMQSTVAMQGLQGLKIN 220

[Close]

BLAST of CV191394 vs. TrEMBL
Match: B7FJ52|B7FJ52_MEDTR (Putative uncharacterized protein OS=Medicago truncatula PE=2 SV=1)

HSP 1 Score: 335.109 bits (858), Expect = 2.812e-90
Identity = 166/217 (76.50%), Postives = 189/217 (87.10%), Query Frame = 2

Query:    5 YINNLNEKIKLEELKQTLFAVFSQFGKILEVLAFKTLKSKGQAWVVFEDASSASSAIRQMQGFPFHDKPLRIQYAKTKSDIIAKADGTFVPRERRKRHEDK-GRKRKDQQDANQAGMALNXXXXXXXXXXXHLSQIPYMGGAKSAVPEAPAPPNNILFVQNLPHQTIPMMLQVLFCQYPGFKEVRMVEAKPGIAFVEYENEMQSHYAMQGLQGFKIS 652
            YINNLNEKIK++ELK++L AVFSQFGKILEVLAFKTLK KGQAWV+FED +SAS+A+RQMQGFPF+DKP+RIQYA+TKSD+IAKA+GTFVPRE+RKRH+DK G+KRKDQ DAN AG  LN            LSQIPY GGAKS +PEAPAPPNNILF+QNLP++T PMMLQ+LF QYPGFKEVRMVEAKPGIAFVEY +EMQS  AMQ LQGFKI+
Sbjct:   17 YINNLNEKIKIDELKKSLHAVFSQFGKILEVLAFKTLKHKGQAWVIFEDVTSASNALRQMQGFPFYDKPMRIQYARTKSDVIAKAEGTFVPREKRKRHDDKAGKKRKDQNDANLAGTGLNPAYAGAYGATPALSQIPYPGGAKSLLPEAPAPPNNILFIQNLPNETTPMMLQMLFLQYPGFKEVRMVEAKPGIAFVEYGDEMQSTMAMQALQGFKIA 233

[Close]

BLAST of CV191394 vs. TrEMBL
Match: B9I9Q4|B9I9Q4_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_807512 PE=4 SV=1)

HSP 1 Score: 332.798 bits (852), Expect = 1.396e-89
Identity = 164/215 (76.28%), Postives = 183/215 (85.12%), Query Frame = 2

Query:    5 YINNLNEKIKLEELKQTLFAVFSQFGKILEVLAFKTLKSKGQAWVVFEDASSASSAIRQMQGFPFHDKPLRIQYAKTKSDIIAKADGTFVPRERRKRHEDKGRKRKDQQDANQAGMALNXXXXXXXXXXXHLSQIPYMGGAKSAVPEAPAPPNNILFVQNLPHQTIPMMLQVLFCQYPGFKEVRMVEAKPGIAFVEYENEMQSHYAMQGLQGFKI 649
            YINNLNEKIK++ELK +L AVFSQFGKILE+LAFKTLK KGQAWV+FED  SAS+AIRQMQ FPF+DKP+RIQYAKTKSDIIAKADGTFVPRE+R+RHE+KG+K+KDQ DANQ G+ L             L QIPY GG KS VPEAPAPPNNILF+QNLP++T PMMLQ+LF QYPGFKEVRMVEAKPGIAFVEY +EMQS  AM GLQGFKI
Sbjct:    4 YINNLNEKIKIDELKTSLHAVFSQFGKILEILAFKTLKHKGQAWVIFEDVQSASNAIRQMQSFPFYDKPMRIQYAKTKSDIIAKADGTFVPREKRRRHEEKGKKKKDQHDANQVGVGLTPAYGGAYGTTPSLLQIPYPGGVKSMVPEAPAPPNNILFIQNLPNETTPMMLQMLFQQYPGFKEVRMVEAKPGIAFVEYGDEMQSTGAMHGLQGFKI 218

[Close]

BLAST of CV191394 vs. TrEMBL
Match: A9PEB3|A9PEB3_POPTR (Putative uncharacterized protein OS=Populus trichocarpa PE=2 SV=1)

HSP 1 Score: 332.798 bits (852), Expect = 1.396e-89
Identity = 164/215 (76.28%), Postives = 183/215 (85.12%), Query Frame = 2

Query:    5 YINNLNEKIKLEELKQTLFAVFSQFGKILEVLAFKTLKSKGQAWVVFEDASSASSAIRQMQGFPFHDKPLRIQYAKTKSDIIAKADGTFVPRERRKRHEDKGRKRKDQQDANQAGMALNXXXXXXXXXXXHLSQIPYMGGAKSAVPEAPAPPNNILFVQNLPHQTIPMMLQVLFCQYPGFKEVRMVEAKPGIAFVEYENEMQSHYAMQGLQGFKI 649
            YINNLNEKIK++ELK +L AVFSQFGKILE+LAFKTLK KGQAWV+FED  SAS+AIRQMQ FPF+DKP+RIQYAKTKSDIIAKADGTFVPRE+R+RHE+KG+K+KDQ DANQ G+ L             L QIPY GG KS VPEAPAPPNNILF+QNLP++T PMMLQ+LF QYPGFKEVRMVEAKPGIAFVEY +EMQS  AM GLQGFKI
Sbjct:   27 YINNLNEKIKIDELKTSLHAVFSQFGKILEILAFKTLKHKGQAWVIFEDVQSASNAIRQMQSFPFYDKPMRIQYAKTKSDIIAKADGTFVPREKRRRHEEKGKKKKDQHDANQVGVGLTPAYGGAYGTTPSLLQIPYPGGVKSMVPEAPAPPNNILFIQNLPNETTPMMLQMLFQQYPGFKEVRMVEAKPGIAFVEYGDEMQSTGAMHGLQGFKI 241

[Close]

BLAST of CV191394 vs. TrEMBL
Match: C6TMN2|C6TMN2_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1)

HSP 1 Score: 324.709 bits (831), Expect = 3.801e-87
Identity = 164/216 (75.93%), Postives = 184/216 (85.19%), Query Frame = 2

Query:    5 YINNLNEKIKLEELKQTLFAVFSQFGKILEVLAFKTLKSKGQAWVVFEDASSASSAIRQMQGFPFHDKPLRIQYAKTKSDIIAKADGTFVPRERRKRHEDKGRKRKDQQDANQAGMALNXXXXXXXXXXXHLSQIPYMGGAKSAVPEAPAPPNNILFVQNLPHQTIPMMLQVLFCQYPGFKEVRMVEAKPGIAFVEYENEMQSHYAMQGLQGFKIS 652
            YINNLNEKIK++ELK++L AVF+QFGKILEVLAFKTLK KGQAWVVFEDASSAS+A+RQMQGFPF+DKP+RIQYAKTKSDIIAKADGTFVPRE+RKRH++K +KRKDQ D+N AGM LN               I Y GGAKS VPEAPAPPNNILF+QNLP+ + PMMLQ+LF QYPGFKEVRMVE KPGIAFVEY +EMQS  AMQ LQGFKI+
Sbjct:   17 YINNLNEKIKIDELKKSLNAVFTQFGKILEVLAFKTLKHKGQAWVVFEDASSASNALRQMQGFPFYDKPMRIQYAKTKSDIIAKADGTFVPREKRKRHDEKAKKRKDQHDSNLAGMGLNPAYAGAYGA---APAIAYPGGAKSMVPEAPAPPNNILFIQNLPNDSTPMMLQMLFLQYPGFKEVRMVETKPGIAFVEYGDEMQSTVAMQTLQGFKIT 229

[Close]

BLAST of CV191394 vs. TrEMBL
Match: C6SZ90|C6SZ90_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1)

HSP 1 Score: 323.939 bits (829), Expect = 6.484e-87
Identity = 165/216 (76.39%), Postives = 183/216 (84.72%), Query Frame = 2

Query:    5 YINNLNEKIKLEELKQTLFAVFSQFGKILEVLAFKTLKSKGQAWVVFEDASSASSAIRQMQGFPFHDKPLRIQYAKTKSDIIAKADGTFVPRERRKRHEDKGRKRKDQQDANQAGMALNXXXXXXXXXXXHLSQIPYMGGAKSAVPEAPAPPNNILFVQNLPHQTIPMMLQVLFCQYPGFKEVRMVEAKPGIAFVEYENEMQSHYAMQGLQGFKIS 652
            YINNLNEKIK++ELK++L AVF+QFGKILEVLAFKTLK KGQAWVVFEDASSAS+A+RQMQGFPF+DKP+RIQYAKTKSDIIAKADGTFVPRE+RKRH+DK +KRKDQ DAN AGM LN               I Y GGAKS VPEAPAPPNNILF+QNLP+ + PMMLQ+LF QYPGFKEVRMVE KPGIAFVEY +EMQS  AMQ LQ FKI+
Sbjct:   17 YINNLNEKIKIDELKKSLNAVFTQFGKILEVLAFKTLKHKGQAWVVFEDASSASNALRQMQGFPFYDKPMRIQYAKTKSDIIAKADGTFVPREKRKRHDDKAKKRKDQHDANLAGMGLNPAYAGAYGA---APAIAYPGGAKSMVPEAPAPPNNILFIQNLPNDSTPMMLQMLFLQYPGFKEVRMVETKPGIAFVEYGDEMQSTVAMQTLQCFKIT 229

[Close]

BLAST of CV191394 vs. TrEMBL
Match: B9GSB4|B9GSB4_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_816688 PE=4 SV=1)

HSP 1 Score: 323.939 bits (829), Expect = 6.484e-87
Identity = 158/215 (73.49%), Postives = 180/215 (83.72%), Query Frame = 2

Query:    5 YINNLNEKIKLEELKQTLFAVFSQFGKILEVLAFKTLKSKGQAWVVFEDASSASSAIRQMQGFPFHDKPLRIQYAKTKSDIIAKADGTFVPRERRKRHEDKGRKRKDQQDANQAGMALNXXXXXXXXXXXHLSQIPYMGGAKSAVPEAPAPPNNILFVQNLPHQTIPMMLQVLFCQYPGFKEVRMVEAKPGIAFVEYENEMQSHYAMQGLQGFKI 649
            YINNLNEKIK++ELK+ L AVFSQFGKILE+LAFKTLK KGQAWVVFED  SAS+A+RQMQ FPF+DKP+RIQYAKTKSDI+AKADGTFVPRE+R+RHE+KG+K+KDQ D NQ G+ L             LSQIPY+GG KS VPEAPAPPNNILF+QNLP++T  MMLQ+LF QY GFKEVRMVE KPGIAFVEY +EMQS  AM  LQGFK+
Sbjct:   25 YINNLNEKIKIDELKKALHAVFSQFGKILEILAFKTLKHKGQAWVVFEDVQSASNAMRQMQSFPFYDKPMRIQYAKTKSDIVAKADGTFVPREKRRRHEEKGKKKKDQHDTNQVGVGLTPAYGGAYGTTPPLSQIPYLGGVKSMVPEAPAPPNNILFIQNLPNETTTMMLQMLFQQYAGFKEVRMVETKPGIAFVEYGDEMQSTVAMHALQGFKL 239

[Close]

BLAST of CV191394 vs. TrEMBL
Match: B9SAT1|B9SAT1_RICCO (Small nuclear ribonucleoprotein U1a,U2b, putative OS=Ricinus communis GN=RCOM_1178640 PE=4 SV=1)

HSP 1 Score: 320.087 bits (819), Expect = 9.363e-86
Identity = 157/215 (73.02%), Postives = 182/215 (84.65%), Query Frame = 2

Query:    5 YINNLNEKIKLEELKQTLFAVFSQFGKILEVLAFKTLKSKGQAWVVFEDASSASSAIRQMQGFPFHDKPLRIQYAKTKSDIIAKADGTFVPRERRKRHEDKGRKRKDQQDANQAGMALNXXXXXXXXXXXHLSQIPYMGGAKSAVPEAPAPPNNILFVQNLPHQTIPMMLQVLFCQYPGFKEVRMVEAKPGIAFVEYENEMQSHYAMQGLQGFKI 649
            YINNLNEKIKL+ELK++L AVFSQFGKI+E+LAFKTLK KGQAWVVFED  SA++AIRQMQ FPF+DKP+RI +AKTKSD+IAKADGTFVPRE+RKRHE+KG+++K+Q DANQAG+ +             LSQIPY GGAKS VPEAPAPPNNILF+QNLP+ T  M+LQ+LF  Y GFKEVRMVE+KPGIAFVEY +EMQS  AMQGLQG KI
Sbjct:   28 YINNLNEKIKLDELKKSLHAVFSQFGKIIEILAFKTLKHKGQAWVVFEDVQSATNAIRQMQSFPFYDKPMRIHFAKTKSDVIAKADGTFVPREKRKRHEEKGKRKKEQHDANQAGIGMAPAYAGAYGATPPLSQIPYPGGAKSMVPEAPAPPNNILFIQNLPNDTTTMVLQMLFQHYAGFKEVRMVESKPGIAFVEYADEMQSTVAMQGLQGLKI 242

[Close]

BLAST of CV191394 vs. TrEMBL
Match: Q39244|Q39244_ARATH (At2g47580/T30B22.12 OS=Arabidopsis thaliana GN=At2g47580/T30B22.12 PE=2 SV=1)

HSP 1 Score: 311.612 bits (797), Expect = 3.330e-83
Identity = 154/218 (70.64%), Postives = 181/218 (83.03%), Query Frame = 2

Query:    5 YINNLNEKIKLEELKQTLFAVFSQFGKILEVLAFKTLKSKGQAWVVFEDASSASSAIRQMQGFPFHDKPLRIQYAKTKSDIIAKADGTFVPRERRKRHEDK--GRKRKDQ-QDANQAGMALNXXXXXXXXXXXHLSQIPYMGGAKSAVPEAPAPPNNILFVQNLPHQTIPMMLQVLFCQYPGFKEVRMVEAKPGIAFVEYENEMQSHYAMQGLQGFKI 649
            YINNLNEK+KL+ELK++L AVFSQFGKILE+LAFKT K KGQAWVVF++  SAS+AI +M  FPF+DK +RIQYAKTKSD++AKADGTFVPRE+RKRHE+K  G+K+KDQ  D+ Q GM +N            LSQ+PY GG K  +PEAPAPPNNILFVQNLPH+T PM+LQ+LFCQY GFKEVRM+EAKPGIAFVE+ +EMQS  AMQGLQGFKI
Sbjct:   21 YINNLNEKVKLDELKKSLNAVFSQFGKILEILAFKTFKHKGQAWVVFDNTESASTAIAKMNNFPFYDKEMRIQYAKTKSDVVAKADGTFVPREKRKRHEEKGGGKKKKDQHHDSTQMGMPMNSAYPGVYGAAPPLSQVPYPGGMKPNMPEAPAPPNNILFVQNLPHETTPMVLQMLFCQYQGFKEVRMIEAKPGIAFVEFADEMQSTVAMQGLQGFKI 238

[Close]

BLAST of CV191394 vs. Vitis vinifera peptide
Match: GSVIVT01028031001 (assembled CDS)

HSP 1 Score: 347.821 bits (891), Expect = 2.019e-96
Identity = 170/217 (78.34%), Postives = 193/217 (88.94%), Query Frame = 2

Query:    5 YINNLNEKIKLEELKQTLFAVFSQFGKILEVLAFKTLKSKGQAWVVFEDASSASSAIRQMQGFPFHDKPLRIQYAKTKSDIIAKADGTFVPRERRKRHEDK-GRKRKDQQDANQAGMALNXXXXXXXXXXXHLSQIPYMGGAKSAVPEAPAPPNNILFVQNLPHQTIPMMLQVLFCQYPGFKEVRMVEAKPGIAFVEYENEMQSHYAMQGLQGFKIS 652
            YINNLNEKIKLEELK++LFAVFSQFGKI+EVLAFKTLK KGQAWVVFE+ SSA++A+RQMQGFPF+DKP+RIQYAKTKSD+IAKADGTFVPRERR+RH+D+ GRKR++Q DANQAG+ +N            LSQIPY+GGAKSAVPEAPAPPNNILF+QNLPH+  PMMLQ+ FCQYPGFKEVRMVEAKPGIAFVEY +EMQS  AMQGLQG KI+
Sbjct:    4 YINNLNEKIKLEELKKSLFAVFSQFGKIMEVLAFKTLKHKGQAWVVFEEVSSATNALRQMQGFPFYDKPMRIQYAKTKSDVIAKADGTFVPRERRRRHDDRAGRKRREQHDANQAGVGVNPAYGGAYGAAPPLSQIPYLGGAKSAVPEAPAPPNNILFIQNLPHEATPMMLQMFFCQYPGFKEVRMVEAKPGIAFVEYGDEMQSTVAMQGLQGLKIN 220

[Close]

BLAST of CV191394 vs. Vitis vinifera peptide
Match: GSVIVT01024622001 (assembled CDS)

HSP 1 Score: 257.684 bits (657), Expect = 2.748e-69
Identity = 127/216 (58.80%), Postives = 166/216 (76.85%), Query Frame = 2

Query:    5 YINNLNEKIKLEELKQTLFAVFSQFGKILEVLAFKTLKSKGQAWVVFEDASSASSAIRQMQGFPFHDKPLRIQYAKTKSDIIAKADGTFVPRERRKRHEDKGRKRKDQQDANQAGMALNXXXXXXXXXXXHLSQIPYMGGAKSAVPEAPAPPNNILFVQNLPHQTIPMMLQVLFCQYPGFKEVRMVEAKPGIAFVEYENEMQSHYAMQGLQGFKIS 652
            YI NLNEK+K EELK++L+ +FSQ+G+IL+V+A KT K +GQAWVVF + ++AS+A+RQMQ FPF+DKP+R+QYAKTKSD +AKADGTFVPRE++K+ E+K  K++  ++A Q+G A                  P+  G + A  E  A PNNILF+QNLPHQT  MMLQVLF QYPGF+EVRM+EAKPGIAFVE+E+++QS  AM+ LQGFKI+
Sbjct:   13 YIKNLNEKVKKEELKRSLYCLFSQYGRILDVVALKTPKLRGQAWVVFSEVTAASNAVRQMQNFPFYDKPMRVQYAKTKSDCVAKADGTFVPREKKKKQEEKAEKKRRAEEAQQSGNANGRNAETNGGPTP-----PFRQGNQGA-REPEAAPNNILFIQNLPHQTTSMMLQVLFQQYPGFREVRMIEAKPGIAFVEFEDDVQSSMAMEALQGFKIT 222

[Close]

BLAST of CV191394 vs. TAIR peptide
Match: AT2G47580.1 (| Symbols: U1A | spliceosomal protein U1A | chr2:19517229-19518686 FORWARD LENGTH=250)

HSP 1 Score: 311.612 bits (797), Expect = 2.337e-85
Identity = 154/218 (70.64%), Postives = 181/218 (83.03%), Query Frame = 2

Query:    5 YINNLNEKIKLEELKQTLFAVFSQFGKILEVLAFKTLKSKGQAWVVFEDASSASSAIRQMQGFPFHDKPLRIQYAKTKSDIIAKADGTFVPRERRKRHEDK--GRKRKDQ-QDANQAGMALNXXXXXXXXXXXHLSQIPYMGGAKSAVPEAPAPPNNILFVQNLPHQTIPMMLQVLFCQYPGFKEVRMVEAKPGIAFVEYENEMQSHYAMQGLQGFKI 649
            YINNLNEK+KL+ELK++L AVFSQFGKILE+LAFKT K KGQAWVVF++  SAS+AI +M  FPF+DK +RIQYAKTKSD++AKADGTFVPRE+RKRHE+K  G+K+KDQ  D+ Q GM +N            LSQ+PY GG K  +PEAPAPPNNILFVQNLPH+T PM+LQ+LFCQY GFKEVRM+EAKPGIAFVE+ +EMQS  AMQGLQGFKI
Sbjct:   21 YINNLNEKVKLDELKKSLNAVFSQFGKILEILAFKTFKHKGQAWVVFDNTESASTAIAKMNNFPFYDKEMRIQYAKTKSDVVAKADGTFVPREKRKRHEEKGGGKKKKDQHHDSTQMGMPMNSAYPGVYGAAPPLSQVPYPGGMKPNMPEAPAPPNNILFVQNLPHETTPMVLQMLFCQYQGFKEVRMIEAKPGIAFVEFADEMQSTVAMQGLQGFKI 238

[Close]

BLAST of CV191394 vs. TAIR peptide
Match: AT2G30260.1 (| Symbols: U2B'' | U2 small nuclear ribonucleoprotein B | chr2:12905557-12907434 REVERSE LENGTH=232)

HSP 1 Score: 238.039 bits (606), Expect = 3.284e-63
Identity = 121/218 (55.50%), Postives = 162/218 (74.31%), Query Frame = 2

Query:    5 YINNLNEKIKLEELKQTLFAVFSQFGKILEVLAFKTLKSKGQAWVVFEDASSASSAIRQMQGFPFHDKPLRIQYAKTKSDIIAKADGTFVPRERRKRHEDK-GRKRKDQQDANQA-GMALNXXXXXXXXXXXHLSQIPYMGGAKSAVPEAPAPPNNILFVQNLPHQTIPMMLQVLFCQYPGFKEVRMVEAKPGIAFVEYENEMQSHYAMQGLQGFKIS 652
            YI NLNE+IK EELK++L+ +FSQFG+IL+V+A KT K +GQAWV F + ++A  A+RQMQ FPF+DKP+R+QYAK KSD +AKA+GTFVP++++++ E+K  RKR+D Q  N A G + N             + +P      S   +   PPNNILF+QNLPH+T  MMLQ+LF QYPGFKE+RM++AKPGIAFVEYE+++Q+  AMQ LQGFKI+
Sbjct:   13 YIQNLNERIKKEELKRSLYCLFSQFGRILDVVALKTPKLRGQAWVTFSEVTAAGHAVRQMQNFPFYDKPMRLQYAKAKSDCLAKAEGTFVPKDKKRKQEEKVERKREDSQRPNTANGPSANGPSAN--------NGVPAPSFQPSG--QETMPPNNILFIQNLPHETTSMMLQLLFEQYPGFKEIRMIDAKPGIAFVEYEDDVQASIAMQPLQGFKIT 220

[Close]

BLAST of CV191394 vs. TAIR peptide
Match: AT1G06960.1 (| Symbols: | RNA-binding (RRM/RBD/RNP motifs) family protein | chr1:2135930-2137533 FORWARD LENGTH=229)

HSP 1 Score: 231.876 bits (590), Expect = 2.353e-61
Identity = 115/224 (51.34%), Postives = 159/224 (70.98%), Query Frame = 2

Query:    5 YINNLNEKIKLEELKQTLFAVFSQFGKILEVLAFKTLKSKGQAWVVFEDASSASSAIRQMQGFPFHDKPLRIQYAKTKSDIIAKADGTFVPRERRKRHEDKGRKRKDQQDANQAGMALNXXXXXXXXXXXHLSQIPYMGGAKSAVPEAP--------APPNNILFVQNLPHQTIPMMLQVLFCQYPGFKEVRMVEAKPGIAFVEYENEMQSHYAMQGLQGFKIS 652
            YI ++NEKIK EELK++L+ +FSQFG++L+V+A KT K +GQAWVVF + ++AS+A+RQMQ FPF+DKP+RIQYAK+KSD + KA+G+FVP+E++ + E+K  +++  ++  Q  M                   P     ++ +P  P         PPNNILF+ NLP +T  MMLQ+LF QYPGFKE+RM+EAKPGIAFVEYE+++QS  AMQ LQGFKI+
Sbjct:   13 YIKHINEKIKKEELKRSLYCLFSQFGRLLDVVALKTPKLRGQAWVVFTEVTAASNAVRQMQNFPFYDKPMRIQYAKSKSDYVTKAEGSFVPKEKKMKQEEKVERKRHAEETQQPSM-------------------PNGATTQNGMPVPPFQPSGQDTMPPNNILFIHNLPIETNSMMLQLLFEQYPGFKEIRMIEAKPGIAFVEYEDDVQSSMAMQALQGFKIT 217

[Close]

BLAST of CV191394 vs. TAIR peptide
Match: AT1G06960.2 (| Symbols: | RNA-binding (RRM/RBD/RNP motifs) family protein | chr1:2135930-2137533 FORWARD LENGTH=228)

HSP 1 Score: 231.491 bits (589), Expect = 3.074e-61
Identity = 113/216 (52.31%), Postives = 157/216 (72.69%), Query Frame = 2

Query:    5 YINNLNEKIKLEELKQTLFAVFSQFGKILEVLAFKTLKSKGQAWVVFEDASSASSAIRQMQGFPFHDKPLRIQYAKTKSDIIAKADGTFVPRERRKRHEDKGRKRKDQQDANQAGMALNXXXXXXXXXXXHLSQIPYMGGAKSAVPEAPAPPNNILFVQNLPHQTIPMMLQVLFCQYPGFKEVRMVEAKPGIAFVEYENEMQSHYAMQGLQGFKIS 652
            YI ++NEKIK EELK++L+ +FSQFG++L+V+A KT K +GQAWVVF + ++AS+A+RQMQ FPF+DKP+RIQYAK+KSD + KA+G+FVP+E++ + E+K  +++  ++  Q  M                   P+    +  +     PPNNILF+ NLP +T  MMLQ+LF QYPGFKE+RM+EAKPGIAFVEYE+++QS  AMQ LQGFKI+
Sbjct:   13 YIKHINEKIKKEELKRSLYCLFSQFGRLLDVVALKTPKLRGQAWVVFTEVTAASNAVRQMQNFPFYDKPMRIQYAKSKSDYVTKAEGSFVPKEKKMKQEEKVERKRHAEETQQPSMPNGATTQNGMPP-------PFQPSGQDTM-----PPNNILFIHNLPIETNSMMLQLLFEQYPGFKEIRMIEAKPGIAFVEYEDDVQSSMAMQALQGFKIT 216

[Close]

BLAST of CV191394 vs. TAIR peptide
Match: AT1G06960.3 (| Symbols: | RNA-binding (RRM/RBD/RNP motifs) family protein | chr1:2135982-2137533 FORWARD LENGTH=200)

HSP 1 Score: 201.06 bits (510), Expect = 4.449e-52
Identity = 100/201 (49.75%), Postives = 139/201 (69.15%), Query Frame = 2

Query:   74 QFGKILEVLAFKTLKSKGQAWVVFEDASSASSAIRQMQGFPFHDKPLRIQYAKTKSDIIAKADGTFVPRERRKRHEDKGRKRKDQQDANQAGMALNXXXXXXXXXXXHLSQIPYMGGAKSAVPEAP--------APPNNILFVQNLPHQTIPMMLQVLFCQYPGFKEVRMVEAKPGIAFVEYENEMQSHYAMQGLQGFKIS 652
            +FG++L+V+A KT K +GQAWVVF + ++AS+A+RQMQ FPF+DKP+RIQYAK+KSD + KA+G+FVP+E++ + E+K  +++  ++  Q  M                   P     ++ +P  P         PPNNILF+ NLP +T  MMLQ+LF QYPGFKE+RM+EAKPGIAFVEYE+++QS  AMQ LQGFKI+
Sbjct:    7 KFGRLLDVVALKTPKLRGQAWVVFTEVTAASNAVRQMQNFPFYDKPMRIQYAKSKSDYVTKAEGSFVPKEKKMKQEEKVERKRHAEETQQPSM-------------------PNGATTQNGMPVPPFQPSGQDTMPPNNILFIHNLPIETNSMMLQLLFEQYPGFKEIRMIEAKPGIAFVEYEDDVQSSMAMQALQGFKIT 188

The following BLAST results are available for this feature:

BLAST of CV191394 vs. DB:swissprot:display
BLAST of CV191394 vs. Populus trichocarpa peptide v2.0
BLAST of CV191394 vs. P. persica 1.0 peptide
BLAST of CV191394 vs. TrEMBL
BLAST of CV191394 vs. Vitis vinifera peptide
BLAST of CV191394 vs. TAIR peptide

BLAST of CV191394 vs. DB:swissprot:display
Analysis Date: 2011-01-18 (BLAST: Vaccinium corymbosum unigene v1 vs Swissprot)
Total hits: 10


Match Name	E-value	Identity	Description
SNRPA_PIG	1.655e-50	44.57	U1 small nuclear ribonucleoprotein A OS=Sus scrofa...	[more]
SNRPA_BOVIN	2.162e-50	44.57	U1 small nuclear ribonucleoprotein A OS=Bos taurus...	[more]
SNRPA_HUMAN	3.688e-50	44.57	U1 small nuclear ribonucleoprotein A OS=Homo sapie...	[more]
RU2B_MOUSE	4.817e-50	47.47	U2 small nuclear ribonucleoprotein B'' OS=Mus musc...	[more]
SNRPA_XENLA	8.216e-50	44.79	U1 small nuclear ribonucleoprotein A OS=Xenopus la...	[more]
SNRPA_MOUSE	2.390e-49	43.58	U1 small nuclear ribonucleoprotein A OS=Mus muscul...	[more]
RU2B_HUMAN	4.077e-49	46.54	U2 small nuclear ribonucleoprotein B'' OS=Homo sap...	[more]
SNRPA_DROME	1.549e-48	46.79	U1 small nuclear ribonucleoprotein A OS=Drosophila...	[more]
RU2B_DICDI	1.228e-45	42.59	U2 small nuclear ribonucleoprotein B'' OS=Dictyost...	[more]
RU1A_SCHPO	6.320e-34	37.90	U1 small nuclear ribonucleoprotein usp102 OS=Schiz...	[more]

BLAST of CV191394 vs. Populus trichocarpa peptide v2.0
Analysis Date: 2011-01-18 (BLAST: Vaccinium corymbosum unigene v1 vs Populus trichocarpa v2.0 peptide)
Total hits: 6


Match Name	E-value	Identity
POPTR_0014s12260.1	1.113e-91	76.28	[more]
POPTR_0019s14440.1	5.756e-64	55.30	[more]
POPTR_0013s14980.1	1.418e-62	53.70	[more]
POPTR_0013s14980.2	1.373e-57	51.39	[more]
POPTR_0002s20490.1	2.061e-37	65.79	[more]
POPTR_0363s00200.1	1.023e-36	65.49	[more]

BLAST of CV191394 vs. P. persica 1.0 peptide
Analysis Date: 2011-01-18 (BLAST: Vaccinium corymbosum unigene v1 vs Ppersica v1.0 peptide)
Total hits: 3


Match Name	E-value	Identity
ppa010847m	1.769e-59	52.73	[more]
ppa010876m	2.310e-59	51.80	[more]
ppa000711m	1.867e-16	73.58	[more]

BLAST of CV191394 vs. TrEMBL
Analysis Date: 2011-01-18 (BLAST: Vaccinium corymbosum unigene v1 vs TrEMBL)
Total hits: 10


Match Name	E-value	Identity	Description
Q41498\|Q41498_SOLTU	6.911e-97	80.09	U1snRNP-specific protein, U1A OS=Solanum tuberosum...	[more]
D7U2B0\|D7U2B0_VITVI	4.193e-94	78.34	Whole genome shotgun sequence of line PN40024, sca...	[more]
B7FJ52\|B7FJ52_MEDTR	2.812e-90	76.50	Putative uncharacterized protein OS=Medicago trunc...	[more]
B9I9Q4\|B9I9Q4_POPTR	1.396e-89	76.28	Predicted protein OS=Populus trichocarpa GN=POPTRD...	[more]
A9PEB3\|A9PEB3_POPTR	1.396e-89	76.28	Putative uncharacterized protein OS=Populus tricho...	[more]
C6TMN2\|C6TMN2_SOYBN	3.801e-87	75.93	Putative uncharacterized protein OS=Glycine max PE...	[more]
C6SZ90\|C6SZ90_SOYBN	6.484e-87	76.39	Putative uncharacterized protein OS=Glycine max PE...	[more]
B9GSB4\|B9GSB4_POPTR	6.484e-87	73.49	Predicted protein OS=Populus trichocarpa GN=POPTRD...	[more]
B9SAT1\|B9SAT1_RICCO	9.363e-86	73.02	Small nuclear ribonucleoprotein U1a,U2b, putative ...	[more]
Q39244\|Q39244_ARATH	3.330e-83	70.64	At2g47580/T30B22.12 OS=Arabidopsis thaliana GN=At2...	[more]

BLAST of CV191394 vs. Vitis vinifera peptide
Analysis Date: 2011-01-25 (BLAST: Vaccinium corymbosum unigene v1 vs Vitis vinifera peptide)
Total hits: 2


Match Name	E-value	Identity	Description
GSVIVT01028031001	2.019e-96	78.34	assembled CDS	[more]
GSVIVT01024622001	2.748e-69	58.80	assembled CDS	[more]

BLAST of CV191394 vs. TAIR peptide
Analysis Date: 2011-02-10 (BLAST: Vaccinium corymbosum unigene v1 vs TAIR 10 peptide)
Total hits: 5


Match Name	E-value	Identity	Description
AT2G47580.1	2.337e-85	70.64	\| Symbols: U1A \| spliceosomal protein U1A \| chr2:1...	[more]
AT2G30260.1	3.284e-63	55.50	\| Symbols: U2B'' \| U2 small nuclear ribonucleoprot...	[more]
AT1G06960.1	2.353e-61	51.34	\| Symbols: \| RNA-binding (RRM/RBD/RNP motifs) fam...	[more]
AT1G06960.2	3.074e-61	52.31	\| Symbols: \| RNA-binding (RRM/RBD/RNP motifs) fam...	[more]
AT1G06960.3	4.449e-52	49.75	\| Symbols: \| RNA-binding (RRM/RBD/RNP motifs) fam...	[more]

InterPro

Analysis Name: InterProScan analysis for Vaccinium corymbosum unigene v1
Date Performed: 2011-01-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000504	RNA recognition motif domain	PFAM	PF00076	RRM_1	coord: 2..72 score: 5.6e-11coord: 157..216 score: 3.5
IPR000504	RNA recognition motif domain	SMART	SM00360	no description	coord: 2..74 score: 1.3e-10coord: 156..217 score: 0.
IPR000504	RNA recognition motif domain	PROFILE	PS50102	RRM	coord: 1..78 score: 14.351coord: 155..217 score: 10
IPR012677	Nucleotide-binding, alpha-beta plait	GENE3D	3.30.70.330	no description	coord: 2..81 score: 9e-21coord: 147..216 score: 4.3
None	No IPR available	PANTHER	PTHR10501	SMALL NUCLEAR RIBONUCLEOPROTEIN U1A,U2B	coord: 2..217 score: 6.8e
None	No IPR available	SEG	seg	seg	coord: 121..131 score
None	No IPR available	SUPERFAMILY	54928	RNA-binding domain, RBD	coord: 2..216 score: 1.1
None	No IPR available	SEG	seg	seg	coord: 17..40 score
None	No IPR available	SEG	seg	seg	coord: 30..39 score
None	No IPR available	SEG	seg	seg	coord: 27..36 score: NAcoord: 58..71 score

Properties


Property Name	Value
Singlet in analysis	Vaccinium corymbosum unigene v1

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>CV191394 ID=CV191394; Name=CV191394; organism=Vaccinium corymbosum; type=EST; length=654bp
GGATTATATCAACAACCTCAACGAGAAGATCAAGCTCGAAGAATTGAAGC
AAACGTTGTTCGCGGTGTTCTCTCAATTCGGGAAAATATTGGAGGTTTTA
GCGTTCAAGACGCTTAAATCCAAAGGCCAAGCCTGGGTTGTCTTCGAAGA
CGCCTCTTCCGCCTCCAGTGCGATTCGTCAAATGCAAGGCTTTCCATTTC
ATGACAAACCTCTGAGGATACAATACGCAAAGACAAAATCAGATATAATA
GCAAAAGCTGATGGTACTTTCGTTCCGAGAGAAAGGAGAAAGAGGCACGA
GGATAAAGGGAGGAAGCGGAAAGACCAACAGGACGCTAATCAAGCTGGAA
TGGCTCTGAATCCTGCTTATGCTGGTGCCTATGGTGCAGCTCCTCATTTA
TCACAAATACCATATATGGGTGGCGCAAAATCAGCAGTTCCAGAAGCTCC
AGCTCCACCGAATAACATTTTATTTGTTCAAAATCTTCCACATCAGACCA
TTCCAATGATGCTGCAAGTGCTCTTCTGCCAATACCCGGGCTTTAAGGAA
GTAAGGATGGTGGAAGCAAAACCAGGAATTGCCTTTGTTGAATACGAGAA
TGAGATGCAATCCCATTACGCCATGCAGGGACTCCAGGGTTTCAAGATAT
CACC

Annotated Terms

The following terms have been associated with this EST:

Vocabulary: **Molecular Function**
Term	Definition
GO:0003676	nucleic acid binding
GO:0000166	nucleotide binding

Vocabulary: **INTERPRO**
Term	Definition
IPR000504	RRM_dom
IPR012677	Nucleotide-bd_a/b_plait_sf
noIPR	unintegrated