DW043145

EST Overview
NameDW043145
Unique NameDW043145
TypeEST
OrganismVaccinium corymbosum (northern highbush blueberry)
Sequence length453
Libraries
Library NameType
LIBEST_018810 Subtracted cDNA library of Vaccinium corymbosumcdna_library
Unigenes
This EST is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Vaccinium corymbosum unigene v1EST
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
Vaccinium corymbosum unigene v12011-01-18
BLAST: Vaccinium corymbosum unigene v1 vs TrEMBL2011-01-18
Homology
[Close]
BLAST of DW043145 vs. TrEMBL
Match: B2BJD3|B2BJD3_RHOCT (Early light-induced protein 4 OS=Rhododendron catawbiense PE=2 SV=1)

HSP 1 Score: 61.2326 bits (147), Expect = 3.790e-8
Identity = 36/66 (54.55%), Postives = 41/66 (62.12%), Query Frame = 1 
Query:   61 MAASSVMQSILVSTATGVAKPARVVGLKPMTPCCYMPRQQRSSSRLVRCMAKVNLIYMCTFANLSP 258
            MA SSVMQSILVS  TGVAK A +    P T  CY+PRQ R+S  LVRCMAK  + +    A   P
Sbjct:    1 MATSSVMQSILVSPVTGVAKGAGLSRTIPRT--CYLPRQGRNSGMLVRCMAKARIDFFDLLAFSGP 64
[Close]
BLAST of DW043145 vs. TrEMBL
Match: B2BJD4|B2BJD4_RHOCT (Early light-induced protein 5 OS=Rhododendron catawbiense PE=2 SV=1)

HSP 1 Score: 59.6918 bits (143), Expect = 1.103e-7
Identity = 32/52 (61.54%), Postives = 37/52 (71.15%), Query Frame = 1 
Query:   61 MAASSVMQSILVSTATGVAKPARVVGLKPMTPCCYMPRQQRSSSRLVRCMAK 216
            MA SSVMQSI+VS  TGVAK   +    P + CCY+PRQ R+S  LVRCMAK
Sbjct:    1 MATSSVMQSIMVSPVTGVAKGTGLSRTIPRS-CCYLPRQGRNSGMLVRCMAK 51
[Close]
BLAST of DW043145 vs. TrEMBL
Match: B2BJD1|B2BJD1_RHOCT (Early light-induced protein 2 OS=Rhododendron catawbiense PE=2 SV=1)

HSP 1 Score: 58.5362 bits (140), Expect = 2.457e-7
Identity = 35/53 (66.04%), Postives = 37/53 (69.81%), Query Frame = 1 
Query:   61 MAASSVMQSILVSTATGVAKPARVVGLKPMTP-CCYMPRQQRSSSRLVRCMAK 216
            MA SSVMQSILVS  TGVAK A   GL    P  CY+PRQ R+S  LVRCMAK
Sbjct:    1 MATSSVMQSILVSPVTGVAKGA---GLNRTIPRSCYLPRQGRNSGMLVRCMAK 50
[Close]
BLAST of DW043145 vs. TrEMBL
Match: B2BJD0|B2BJD0_RHOCT (Early light-induced protein 1 OS=Rhododendron catawbiense PE=2 SV=1)

HSP 1 Score: 58.5362 bits (140), Expect = 2.457e-7
Identity = 35/53 (66.04%), Postives = 37/53 (69.81%), Query Frame = 1 
Query:   61 MAASSVMQSILVSTATGVAKPARVVGLKPMTP-CCYMPRQQRSSSRLVRCMAK 216
            MA SSVMQSILVS  TGVAK A   GL    P  CY+PRQ R+S  LVRCMAK
Sbjct:    1 MATSSVMQSILVSPVTGVAKGA---GLSRTIPRSCYLPRQGRNSGMLVRCMAK 50
The following BLAST results are available for this feature:
BLAST of DW043145 vs. TrEMBL
Analysis Date: 2011-01-18 (BLAST: Vaccinium corymbosum unigene v1 vs TrEMBL)
Total hits: 4
Match NameE-valueIdentityDescription
B2BJD3|B2BJD3_RHOCT3.790e-854.55Early light-induced protein 4 OS=Rhododendron cata... [more]
B2BJD4|B2BJD4_RHOCT1.103e-761.54Early light-induced protein 5 OS=Rhododendron cata... [more]
B2BJD1|B2BJD1_RHOCT2.457e-766.04Early light-induced protein 2 OS=Rhododendron cata... [more]
B2BJD0|B2BJD0_RHOCT2.457e-766.04Early light-induced protein 1 OS=Rhododendron cata... [more]
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Properties
Property NameValue
Singlet in analysisVaccinium corymbosum unigene v1
Sequences
The following sequences are available for this feature:

EST sequence

>DW043145 ID=DW043145; Name=DW043145; organism=Vaccinium corymbosum; type=EST; length=453bp
CAGCCATAGCCATAACACTACGAACCCTGTAACTACAATCACCTAGCTTA
TACTCTACCAATGGCCGCCTCATCAGTAATGCAGTCCATTCTAGTGAGCA
CGGCGACAGGTGTCGCCAAGCCTGCGCGCGTGGTGGGATTGAAACCGATG
ACTCCTTGCTGCTATATGCCCCGTCAGCAGAGGAGTTCTAGCCGGCTAGT
GCGGTGCATGGCCAAGGTAAATCTTATATATATGTGTACTTTTGCGAACT
TAAGCCCATCACACTAAGTTTTATTTTTTGGCTTTTCGATATTTTTCATT
GATGTATACCAAAAAACTAAAGAGCTAAGGAAATCATTTAAGTGGAAAAG
GGGCCCTCGGACTCGGATTATTTTTTATTTCTTGGTATGAACAAGGTNGG
GGAAATTAGGTTAATTTAAACGTTNGAATNGGTTTCGAACTGGGCCAGGC
GGG
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