DW043440

EST Overview
NameDW043440
Unique NameDW043440
TypeEST
OrganismVaccinium corymbosum (northern highbush blueberry)
Sequence length559
Libraries
Library NameType
LIBEST_018810 Subtracted cDNA library of Vaccinium corymbosumcdna_library
Unigenes
This EST is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Vaccinium corymbosum unigene v1EST
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
Vaccinium corymbosum unigene v12011-01-18
BLAST: Vaccinium corymbosum unigene v1 vs TrEMBL2011-01-18
InterProScan analysis for Vaccinium corymbosum unigene v12011-01-18
Homology
BLAST of DW043440 vs. TrEMBL
Match: B2BJD1|B2BJD1_RHOCT (Early light-induced protein 2 OS=Rhododendron catawbiense PE=2 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 1.577e-12
Identity = 46/75 (61.33%), Postives = 52/75 (69.33%), Query Frame = 1
Query:  151 MAASLVMQSILVSPVTGVAMPARVVGLKPMTP-CCYMPRQQRSSSRLVRCMAKDGQNKEVETPPTSSQKAKVSTD 372
            MA S VMQSILVSPVTGVA  A   GL    P  CY+PRQ R+S  LVRCMAKDG+ +EVE+ P  +  AKV TD
Sbjct:    1 MATSSVMQSILVSPVTGVAKGA---GLNRTIPRSCYLPRQGRNSGMLVRCMAKDGRKEEVES-PIEANVAKVKTD 71          
BLAST of DW043440 vs. TrEMBL
Match: B2BJD4|B2BJD4_RHOCT (Early light-induced protein 5 OS=Rhododendron catawbiense PE=2 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 2.060e-12
Identity = 45/78 (57.69%), Postives = 52/78 (66.67%), Query Frame = 1
Query:  151 MAASLVMQSILVSPVTGVAMPARVVGLKPMTP--CCYMPRQQRSSSRLVRCMAKDGQNKEVETPPTSSQKAKVSTDIL 378
            MA S VMQSI+VSPVTGVA   +  GL    P  CCY+PRQ R+S  LVRCMAK GQ +E  +PP    KAKV  D+L
Sbjct:    1 MATSSVMQSIMVSPVTGVA---KGTGLSRTIPRSCCYLPRQGRNSGMLVRCMAKGGQKEEAGSPP----KAKVLFDLL 71          
BLAST of DW043440 vs. TrEMBL
Match: B2BJD0|B2BJD0_RHOCT (Early light-induced protein 1 OS=Rhododendron catawbiense PE=2 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 2.060e-12
Identity = 46/75 (61.33%), Postives = 52/75 (69.33%), Query Frame = 1
Query:  151 MAASLVMQSILVSPVTGVAMPARVVGLKPMTP-CCYMPRQQRSSSRLVRCMAKDGQNKEVETPPTSSQKAKVSTD 372
            MA S VMQSILVSPVTGVA  A   GL    P  CY+PRQ R+S  LVRCMAKDG+ +EVE+ P  +  AKV TD
Sbjct:    1 MATSSVMQSILVSPVTGVAKGA---GLSRTIPRSCYLPRQGRNSGMLVRCMAKDGRKEEVES-PIEANVAKVRTD 71          
BLAST of DW043440 vs. TrEMBL
Match: B2BJD5|B2BJD5_RHOCT (Early light-induced protein 6 OS=Rhododendron catawbiense PE=2 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 1.965e-11
Identity = 47/86 (54.65%), Postives = 52/86 (60.47%), Query Frame = 1
Query:  151 MAASLVMQSILVSPVTGVAMPARVVGLKPMT---PCCYMPRQQRSSSRLVRCMAKDGQNKEVETPPTSSQKAKVSTDILRTCFAFS 399
            MA S VMQSI+VSP TGVA   +  GL   T     CY+PRQ R+S  LVRCMAK GQ +EV T P    KAKV TD      AFS
Sbjct:    1 MATSSVMQSIMVSPATGVA--TKGTGLSRSTIPRSSCYLPRQGRNSGALVRCMAKGGQKEEVGTSP----KAKVRTDFF-NLLAFS 79          

HSP 2 Score: 21.9422 bits (45), Expect = 1.965e-11
Identity = 10/15 (66.67%), Postives = 10/15 (66.67%), Query Frame = 2
Query:  512 DVFWPXYSTGGIPWF 556
            DVF    S GGIPWF
Sbjct:  108 DVF-AQISNGGIPWF 121          
BLAST of DW043440 vs. TrEMBL
Match: B2BJD2|B2BJD2_RHOCT (Early light-induced protein 3 OS=Rhododendron catawbiense PE=2 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 4.295e-10
Identity = 40/63 (63.49%), Postives = 44/63 (69.84%), Query Frame = 1
Query:  151 MAASLVMQSILVSPVTGVAMPARVVGLKPMTP-CCYMPRQQRSSSRLVRCMAKDGQNKEVETP 336
            MA S VMQSILVSPVTGVA  A   GL    P   Y+PRQ R S  LVRCMAKDG+ +EVE+P
Sbjct:    1 MATSSVMQSILVSPVTGVAKGA---GLSRTIPRSSYLPRQGRDSGMLVRCMAKDGKKEEVESP 60          
BLAST of DW043440 vs. TrEMBL
Match: B2CZY6|B2CZY6_CAMSI (Putative cold-inducible protein OS=Camellia sinensis GN=ELIP1 PE=2 SV=1)

HSP 1 Score: 64.3142 bits (155), Expect = 6.202e-9
Identity = 40/81 (49.38%), Postives = 48/81 (59.26%), Query Frame = 1
Query:  157 ASLVMQSILVSPVTGVAMPARVVGLKPMTPCCYMPRQQRSSSRLVRCMAKDGQNKEV---ETPPTSSQ-------KAKVST 369
            A+  MQSIL  PV+GV   AR       TPC Y+PR QR++   VRCMA+D QNK+V    TPP +SQ       K KVST
Sbjct:    2 ATPAMQSILARPVSGVTARAR---FSQFTPCSYVPRLQRNAGMQVRCMAEDDQNKDVTPITTPPPTSQPISFPPPKPKVST 79          
BLAST of DW043440 vs. TrEMBL
Match: B2BJD6|B2BJD6_RHOCT (Early light-induced protein 7 OS=Rhododendron catawbiense PE=2 SV=1)

HSP 1 Score: 59.6918 bits (143), Expect = 8.244e-8
Identity = 45/94 (47.87%), Postives = 53/94 (56.38%), Query Frame = 1
Query:  151 MAASLVMQSILVSPVTGVAMPARVVGLKPMTPCCYMPRQQRSSSRLVRCMAKDGQNKE---VETPPTSS--------QKAKVSTDILRTCFAFS 399
            MA S VMQSILVSPV GVA       L+P     +MP Q+RSSS +VRC A++GQ ++     TP T S         KAK STD     FAFS
Sbjct:    1 MATSSVMQSILVSPVAGVAKGLGSNRLRPAYR--HMPHQRRSSSVVVRCTAENGQKEQAVPAATPSTPSPLPIPPPPPKAKASTDFF-DVFAFS 91          

HSP 2 Score: 20.7866 bits (42), Expect = 8.244e-8
Identity = 9/15 (60.00%), Postives = 10/15 (66.67%), Query Frame = 2
Query:  512 DVFWPXYSTGGIPWF 556
            DVF    + GGIPWF
Sbjct:  120 DVF-AQIANGGIPWF 133          
BLAST of DW043440 vs. TrEMBL
Match: B2BJD3|B2BJD3_RHOCT (Early light-induced protein 4 OS=Rhododendron catawbiense PE=2 SV=1)

HSP 1 Score: 59.6918 bits (143), Expect = 1.527e-7
Identity = 34/52 (65.38%), Postives = 37/52 (71.15%), Query Frame = 1
Query:  151 MAASLVMQSILVSPVTGVAMPARVVGLKPMTPCCYMPRQQRSSSRLVRCMAK 306
            MA S VMQSILVSPVTGVA  A +    P T  CY+PRQ R+S  LVRCMAK
Sbjct:    1 MATSSVMQSILVSPVTGVAKGAGLSRTIPRT--CYLPRQGRNSGMLVRCMAK 50          
BLAST of DW043440 vs. TrEMBL
Match: C9E439|C9E439_CAMSI (Putative early light induced protein 2 OS=Camellia sinensis GN=ELIP2 PE=2 SV=1)

HSP 1 Score: 58.5362 bits (140), Expect = 3.403e-7
Identity = 35/73 (47.95%), Postives = 43/73 (58.90%), Query Frame = 1
Query:  151 MAASLVMQSILVSPVTGVAMPARVVGLKPMTPCCYMPRQQRSSSRLVRCMAKDGQNKEVETPPTSSQKAKVST 369
            MA S  MQS+L  PVT V   AR       TPC Y+P  Q+++S  VRCMAK GQ ++V      +QK KVST
Sbjct:    1 MATSATMQSVLARPVTSVTTRAR---FGQFTPCSYVPYLQKNASMQVRCMAKYGQKEDV------TQKPKVST 64          
The following BLAST results are available for this feature:
BLAST of DW043440 vs. TrEMBL
Analysis Date: 2011-01-18 (BLAST: Vaccinium corymbosum unigene v1 vs TrEMBL)
Total hits: 9
Match NameE-valueIdentityDescription
B2BJD1|B2BJD1_RHOCT1.577e-1261.33Early light-induced protein 2 OS=Rhododendron cata... [more]
B2BJD4|B2BJD4_RHOCT2.060e-1257.69Early light-induced protein 5 OS=Rhododendron cata... [more]
B2BJD0|B2BJD0_RHOCT2.060e-1261.33Early light-induced protein 1 OS=Rhododendron cata... [more]
B2BJD5|B2BJD5_RHOCT1.965e-1154.65Early light-induced protein 6 OS=Rhododendron cata... [more]
B2BJD2|B2BJD2_RHOCT4.295e-1063.49Early light-induced protein 3 OS=Rhododendron cata... [more]
B2CZY6|B2CZY6_CAMSI6.202e-949.38Putative cold-inducible protein OS=Camellia sinens... [more]
B2BJD6|B2BJD6_RHOCT8.244e-847.87Early light-induced protein 7 OS=Rhododendron cata... [more]
B2BJD3|B2BJD3_RHOCT1.527e-765.38Early light-induced protein 4 OS=Rhododendron cata... [more]
C9E439|C9E439_CAMSI3.403e-747.95Putative early light induced protein 2 OS=Camellia... [more]
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InterPro
Analysis Name: InterProScan analysis for Vaccinium corymbosum unigene v1
Date Performed: 2011-01-18
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSEGsegsegcoord: 11..25
score
NoneNo IPR availableSEGsegsegcoord: 18..32
score
NoneNo IPR availableSEGsegsegcoord: 88..104
score

Properties
Property NameValue
Singlet in analysisVaccinium corymbosum unigene v1
Sequences
The following sequences are available for this feature:

EST sequence

>DW043440 ID=DW043440; Name=DW043440; organism=Vaccinium corymbosum; type=EST; length=559bp
ACAGCCCTTATACAGAGCGGCCGCCCGGGCTGGTACGCGGGGACAACTCA
AAACTTAACTTAACAGCCCTGAAGTGTGAAGTTTACTTACATAGCCATAG
CCATAACACTTAGAACCCTGTAACTCAAATCCCTAGCTTAATACTCTACA
ATGGCCGCCTCGTTAGTAATGCAGTCCATACTAGTGAGCCCGGTGACAGG
TGTTGCCATGCCGGCGCGCGTGGTGGGATTGAAACCGATGACTCCTTGCT
GCTATATGCCCCGTCAGCAGAGGAGCTCTAGCCGGCTAGTGCGGTGCATG
GCCAAGGATGGTCAGAATAAGGAAGTCGAAACTCCCCCCACGTCGTCCCA
AAAGGCTAAGGTCAGCACCGATATCTTACGCACGTGTTTCGCATTCAGCC
GGGGCCAGCCACCGGGAGGAGAAATCCAACCGGGCANAACTCCCCCCATT
GAATTCGGGCTTTCGTTGGGCCACCCCATTACCCCGTTGGNAACTAATCA
CATTGGTTAGGGATGTGTTTTGGCCCANATATTCAACNGGGGGGATCCCC
TGGTTTTTT
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Annotated Terms
The following terms have been associated with this EST:
Vocabulary: INTERPRO
TermDefinition
noIPRunintegrated