CV090324

EST Overview
NameCV090324
Unique NameCV090324
TypeEST
OrganismVaccinium corymbosum (northern highbush blueberry)
Sequence length789
Libraries
Library NameType
LIBEST_014530 cDNA cold acclimated Bluecrop librarycdna_library
Unigenes
This EST is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Vaccinium corymbosum unigene v1EST
Homology
BLAST of CV090324 vs. Populus trichocarpa peptide v2.0
Match: POPTR_0017s04420.1 ()

HSP 1 Score: 63.5438 bits (153), Expect = 1.709e-10
Identity = 30/46 (65.22%), Postives = 40/46 (86.96%), Query Frame = 1
Query:    1 RTSKQTVDLLKRRGKALESQVKSIKAVMQDLKAQASYFDATGAEVA 138
            RT+KQTV++L RRGKAL+SQV+S+ A M+DLKA+AS+FD T +E A
Sbjct:  102 RTAKQTVEILTRRGKALDSQVESLMANMKDLKAEASFFDVTASEAA 147          
BLAST of CV090324 vs. P. persica 1.0 peptide
Match: ppa008561m ()

HSP 1 Score: 59.3066 bits (142), Expect = 2.269e-9
Identity = 27/46 (58.70%), Postives = 38/46 (82.61%), Query Frame = 1
Query:    1 RTSKQTVDLLKRRGKALESQVKSIKAVMQDLKAQASYFDATGAEVA 138
            RTS+QT+++LKRRG AL+SQV S+ A++ DLK +AS+ DAT +E A
Sbjct:   32 RTSRQTLEILKRRGMALDSQVDSLNAMLDDLKLEASFLDATASEAA 77          
BLAST of CV090324 vs. TrEMBL
Match: A5BQT7|A5BQT7_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_012794 PE=4 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 7.249e-10
Identity = 33/44 (75.00%), Postives = 40/44 (90.91%), Query Frame = 1
Query:    1 RTSKQTVDLLKRRGKALESQVKSIKAVMQDLKAQASYFDATGAE 132
            RTSKQTV++L RRGKALESQV S+KA+M+DLKA+ S+FDAT AE
Sbjct:   86 RTSKQTVEILDRRGKALESQVDSLKAMMKDLKAEVSFFDATAAE 129          
BLAST of CV090324 vs. TrEMBL
Match: B9RVX0|B9RVX0_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1173640 PE=4 SV=1)

HSP 1 Score: 62.7734 bits (151), Expect = 3.978e-8
Identity = 28/46 (60.87%), Postives = 41/46 (89.13%), Query Frame = 1
Query:    1 RTSKQTVDLLKRRGKALESQVKSIKAVMQDLKAQASYFDATGAEVA 138
            RT+KQT ++LKRRGK L+SQV+S+KA ++DL+A+AS+FD+T +E A
Sbjct:   99 RTAKQTAEILKRRGKVLDSQVESLKANIKDLRAEASFFDSTASETA 144          
BLAST of CV090324 vs. TrEMBL
Match: Q9ZW98|Q9ZW98_ARATH (F11M21.31 protein OS=Arabidopsis thaliana GN=F11M21.31 PE=4 SV=1)

HSP 1 Score: 58.151 bits (139), Expect = 9.798e-7
Identity = 27/46 (58.70%), Postives = 37/46 (80.43%), Query Frame = 1
Query:    1 RTSKQTVDLLKRRGKALESQVKSIKAVMQDLKAQASYFDATGAEVA 138
            R+SKQTVD LKRR K L+SQ+ S+KA ++DL+ +AS+F  T +EVA
Sbjct:   97 RSSKQTVDFLKRRDKTLQSQIHSLKAEIEDLQTEASFFTTTASEVA 142          
BLAST of CV090324 vs. TrEMBL
Match: Q8GWP1|Q8GWP1_ARATH (Putative uncharacterized protein At1g03760 OS=Arabidopsis thaliana GN=At1g03760/F11M21_31 PE=2 SV=1)

HSP 1 Score: 58.151 bits (139), Expect = 9.798e-7
Identity = 27/46 (58.70%), Postives = 37/46 (80.43%), Query Frame = 1
Query:    1 RTSKQTVDLLKRRGKALESQVKSIKAVMQDLKAQASYFDATGAEVA 138
            R+SKQTVD LKRR K L+SQ+ S+KA ++DL+ +AS+F  T +EVA
Sbjct:   97 RSSKQTVDFLKRRDKTLQSQIHSLKAEIEDLQTEASFFTTTASEVA 142          
BLAST of CV090324 vs. Vitis vinifera peptide
Match: GSVIVT01020569001 (assembled CDS)

HSP 1 Score: 68.5514 bits (166), Expect = 3.188e-12
Identity = 33/44 (75.00%), Postives = 40/44 (90.91%), Query Frame = 1
Query:    1 RTSKQTVDLLKRRGKALESQVKSIKAVMQDLKAQASYFDATGAE 132
            RTSKQTV++L RRGKALESQV S+KA+M+DLKA+ S+FDAT AE
Sbjct:  111 RTSKQTVEILDRRGKALESQVDSLKAMMKDLKAEVSFFDATAAE 154          
BLAST of CV090324 vs. TAIR peptide
Match: AT1G03760.1 (| Symbols: | Prefoldin chaperone subunit family protein | chr1:941211-943320 REVERSE LENGTH=391)

HSP 1 Score: 58.151 bits (139), Expect = 6.310e-9
Identity = 27/46 (58.70%), Postives = 37/46 (80.43%), Query Frame = 1
Query:    1 RTSKQTVDLLKRRGKALESQVKSIKAVMQDLKAQASYFDATGAEVA 138
            R+SKQTVD LKRR K L+SQ+ S+KA ++DL+ +AS+F  T +EVA
Sbjct:   97 RSSKQTVDFLKRRDKTLQSQIHSLKAEIEDLQTEASFFTTTASEVA 142          
The following BLAST results are available for this feature:
BLAST of CV090324 vs. Populus trichocarpa peptide v2.0
Analysis Date: 2011-01-18 (BLAST: Vaccinium corymbosum unigene v1 vs Populus trichocarpa v2.0 peptide)
Total hits: 1
Match NameE-valueIdentityDescription
POPTR_0017s04420.11.709e-1065.22[more]
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BLAST of CV090324 vs. P. persica 1.0 peptide
Analysis Date: 2011-01-18 (BLAST: Vaccinium corymbosum unigene v1 vs Ppersica v1.0 peptide)
Total hits: 1
Match NameE-valueIdentityDescription
ppa008561m2.269e-958.70[more]
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BLAST of CV090324 vs. TrEMBL
Analysis Date: 2011-01-18 (BLAST: Vaccinium corymbosum unigene v1 vs TrEMBL)
Total hits: 4
Match NameE-valueIdentityDescription
A5BQT7|A5BQT7_VITVI7.249e-1075.00Putative uncharacterized protein OS=Vitis vinifera... [more]
B9RVX0|B9RVX0_RICCO3.978e-860.87Putative uncharacterized protein OS=Ricinus commun... [more]
Q9ZW98|Q9ZW98_ARATH9.798e-758.70F11M21.31 protein OS=Arabidopsis thaliana GN=F11M2... [more]
Q8GWP1|Q8GWP1_ARATH9.798e-758.70Putative uncharacterized protein At1g03760 OS=Arab... [more]
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BLAST of CV090324 vs. Vitis vinifera peptide
Analysis Date: 2011-01-25 (BLAST: Vaccinium corymbosum unigene v1 vs Vitis vinifera peptide)
Total hits: 1
Match NameE-valueIdentityDescription
GSVIVT010205690013.188e-1275.00assembled CDS[more]
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BLAST of CV090324 vs. TAIR peptide
Analysis Date: 2011-02-10 (BLAST: Vaccinium corymbosum unigene v1 vs TAIR 10 peptide)
Total hits: 1
Match NameE-valueIdentityDescription
AT1G03760.16.310e-958.70| Symbols: | Prefoldin chaperone subunit family p... [more]
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InterPro
Analysis Name: InterProScan analysis for Vaccinium corymbosum unigene v1
Date Performed: 2011-01-18
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSEGsegsegcoord: 47..64
score
NoneNo IPR availableSEGsegsegcoord: 14..31
score

Properties
Property NameValue
Singlet in analysisVaccinium corymbosum unigene v1
Sequences
The following sequences are available for this feature:

EST sequence

>CV090324 ID=CV090324; Name=CV090324; organism=Vaccinium corymbosum; type=EST; length=789bp
AGAACATCTAAACAAACCGTTGACCTTTTAAAAAGAAGAGGGAAGGCTTT
AGAATCCCAAGTTAAGTCCATTAAGGCTGTGATGCAGGATCTTAAGGCCC
AGGCTTCGTATTTTGATGCTACAGGTGCTGAAGTGGCAGAGGGTCTTGTG
GAGATAACAGAAGAATATACTGAGGAAACTTCAGCTGAGGAGGTGTCAAA
AGCAGGCAGGTTCCAGCCTCTTATCGTCTTCTATTGAACTGTTTGGTCTT
TGGTTGAATGTGCAAGTATTTGGAGAATATATCAATTGATGTTGTTGCTG
TCTTTTCTTCTCTTTCCTGTTGGATTTATATGCTATGTGATGTAACCAGT
TGTCTTATCCATGTTGATGTTCTACCATTTTATATTGGAAAAACTTTGCT
TCTTTATGTGTCATCATTTAAACTGTAGTTATCCTTACTACATAGTTGAT
GGATATTGTCTCATTTTTCCACCTAAGAGGACATATCCACCTCTGTGTAA
TGTTGTAATTTCTCAATTCTCATACAATCCCCCTTAGCCTTTGCGATAAG
AAATTTTCTACATCCAAGTTAAGTGGACAACAGTTTATACATTTTTTGAA
GTTACTTGACTGGCCACCTACACTATAAACATTCCTAGTCAAATGTTAAC
TAAATTTACATGAGTACTGGAGTGCTGTTTGTTGGCCATCAACCAAGAGC
AATCCTTTTCGGTTCCTGTTAACATGAGAGTAATTCTTGGTGTTTTGCTG
CACAGTTGGTGTAAAGTACCTGGACTTACTGTGTGTTCT
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Annotated Terms
The following terms have been associated with this EST:
Vocabulary: INTERPRO
TermDefinition
noIPRunintegrated